Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146551.5 + phase: 0 
         (606 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC217866                                                              579  e-165
TC222154                                                              346  1e-95
BI969700                                                              233  2e-61
TC218140                                                              185  6e-47
TC207556 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl...   185  6e-47
TC208509 similar to UP|Q9LRP8 (Q9LRP8) Non-phototropic hypocotyl...   181  8e-46
TC222625 similar to GB|BAB11327.1|10177916|AB016886 photorecepto...   178  5e-45
BI497474 similar to GP|15451228|gb| photoreceptor-interacting pr...   172  3e-43
TC218139 similar to UP|Q93Y14 (Q93Y14) Photoreceptor-interacting...   157  2e-38
TC230833                                                              150  1e-36
TC213886                                                              142  6e-34
TC209886 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (39%)            138  6e-33
TC231319 similar to UP|Q9LFU0 (Q9LFU0) Non-phototropic hypocotyl...   134  2e-31
TC207970 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23...   130  2e-30
TC234775 similar to UP|Q9FMF5 (Q9FMF5) Non-phototropic hypocotyl...   123  2e-28
TC230959 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl...   119  4e-27
TC231995 similar to GB|BAB11327.1|10177916|AB016886 photorecepto...   117  2e-26
TC229238 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (40%)            107  2e-23
BM085556                                                              103  2e-22
AW781720                                                              100  2e-21

>TC217866 
          Length = 1362

 Score =  579 bits (1492), Expect = e-165
 Identities = 302/369 (81%), Positives = 329/369 (88%)
 Frame = +2

Query: 238 NFSKGMIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDRIRDVLVK 297
           +FSKGMI C DVSKHRLIVETIV LLP++KGSV CRFL+KLLKA IFVES DR ++ LVK
Sbjct: 5   DFSKGMIQCGDVSKHRLIVETIVWLLPTEKGSVPCRFLLKLLKAAIFVESGDRTKEELVK 184

Query: 298 RIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRK 357
           RIGQQLEEASV+DILI+APDG  T+YDV IVQ IVREF MK+ N+EIE VGG ELEGIRK
Sbjct: 185 RIGQQLEEASVSDILIQAPDGA-TIYDVSIVQNIVREFFMKNGNAEIESVGGDELEGIRK 361

Query: 358 PGILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYL 417
           PGILSDASKLMVAKLID YLAEIAKDPNLPL  FVNLAELVS ISRP+HDGLYRAIDTYL
Sbjct: 362 PGILSDASKLMVAKLIDEYLAEIAKDPNLPLPEFVNLAELVSSISRPAHDGLYRAIDTYL 541

Query: 418 KEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTS 477
           KEHP I+KGEKK IC+LMDCRKLSVDA LHAVQNERLP RV+VQVL+FEQ+RTAASSGTS
Sbjct: 542 KEHPAINKGEKKRICKLMDCRKLSVDACLHAVQNERLPLRVVVQVLYFEQLRTAASSGTS 721

Query: 478 TPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSFK 537
           TPDI +GIKDL+  SNGSSRSGTTNPE + D   TAEELKALRKELASLR SNGVGN+ K
Sbjct: 722 TPDIPRGIKDLNNESNGSSRSGTTNPEDELDAVATAEELKALRKELASLRLSNGVGNNDK 901

Query: 538 DGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTP 597
           DGD KP+MDKAV+ K+KGLLKSKKSFIK+WASKGG GENSGSDSSES+ S NPEE KSTP
Sbjct: 902 DGDNKPSMDKAVMSKVKGLLKSKKSFIKIWASKGGQGENSGSDSSESMSSANPEEAKSTP 1081

Query: 598 SRNRRNSVS 606
           SRNRR+SVS
Sbjct: 1082SRNRRHSVS 1108


>TC222154 
          Length = 600

 Score =  346 bits (888), Expect = 1e-95
 Identities = 165/188 (87%), Positives = 178/188 (93%)
 Frame = +1

Query: 18  GDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASAFEICAKFCYGMTVTL 77
           GD KFYLHKFPL+SKSSH+Q LISLNNEEN++E+QISDIPGGA+ FEICAKFCYGMTVTL
Sbjct: 10  GDIKFYLHKFPLLSKSSHIQTLISLNNEENVDEVQISDIPGGANTFEICAKFCYGMTVTL 189

Query: 78  NAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDSIILLQTTKSMSPLDE 137
           NAYNVIATRCAAEYLGMHE IEKGNL++KIDVFLSSSIFRSWKDSIILLQT+KSM PL E
Sbjct: 190 NAYNVIATRCAAEYLGMHEAIEKGNLIYKIDVFLSSSIFRSWKDSIILLQTSKSMLPLVE 369

Query: 138 EQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQNGVRTRNVPKDWWVED 197
           + KVV+ CIESIANKACVDVSKVDWSYTYNRKKLPEENG ESNQNG+RTR VPKDWWVED
Sbjct: 370 DLKVVSHCIESIANKACVDVSKVDWSYTYNRKKLPEENGIESNQNGLRTRLVPKDWWVED 549

Query: 198 LCELEVDM 205
           LCELEVD+
Sbjct: 550 LCELEVDL 573


>BI969700 
          Length = 757

 Score =  233 bits (594), Expect = 2e-61
 Identities = 123/184 (66%), Positives = 141/184 (75%)
 Frame = -2

Query: 423 ISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTSTPDIA 482
           I+KGEKKSIC+LM    LS  A LH VQ E LP RV+ QVL+F Q+RT ASSG S+ DI 
Sbjct: 753 INKGEKKSICKLMXXXXLSXXACLHTVQXESLPVRVVAQVLYFAQIRTGASSGPSSRDIH 574

Query: 483 KGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSFKDGDAK 542
           +GIK L   SNGSSRSGT+NPE +     TAEELKA+RKE ASL  SNGVGN+ KDGD K
Sbjct: 573 RGIKXLHNESNGSSRSGTSNPEDELYAVATAEELKAIRKERASLSLSNGVGNNDKDGDNK 394

Query: 543 PNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPSRNRR 602
           P+MDKAV+ K+KGLLKSKKS  K+W SKG  GENSGS SSES+   NPE+ KSTPSRNRR
Sbjct: 393 PSMDKAVMSKVKGLLKSKKSLFKMWHSKGAQGENSGSVSSESMSCANPEKAKSTPSRNRR 214

Query: 603 NSVS 606
           +SVS
Sbjct: 213 HSVS 202


>TC218140 
          Length = 724

 Score =  185 bits (469), Expect = 6e-47
 Identities = 107/196 (54%), Positives = 132/196 (66%), Gaps = 6/196 (3%)
 Frame = +1

Query: 417 LKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVR-TAASSG 475
           LKEHPGISK EKK IC+LM+CRKLS +A +HAVQNERLP RV+VQVL FEQ+R T +S G
Sbjct: 4   LKEHPGISKSEKKRICRLMNCRKLSAEACMHAVQNERLPMRVVVQVLFFEQLRATTSSGG 183

Query: 476 TSTPDIAKGIKD-LSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGN 534
             TPD    I+  L  GS+GSSRS  TN E + D  GT E++K+L+ EL +L+ S G   
Sbjct: 184 NGTPDHPGSIRALLPGGSHGSSRSTITNTEEEWDAVGTMEDIKSLKGELDALKLSGGTSG 363

Query: 535 SFKDGD----AKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNP 590
           +    D     K N +K    KMKGL+ SKK   K+W+SK   GE S SD+SES  S   
Sbjct: 364 ASSRSDNNDGGKDNAEKVAASKMKGLM-SKKIISKIWSSKERSGELSSSDTSESPASTVV 540

Query: 591 EEVKSTPSRNRRNSVS 606
           EE KSTPSR+RR+S+S
Sbjct: 541 EETKSTPSRSRRHSLS 588


>TC207556 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl 3, partial
           (43%)
          Length = 1457

 Score =  185 bits (469), Expect = 6e-47
 Identities = 108/288 (37%), Positives = 175/288 (60%), Gaps = 11/288 (3%)
 Frame = +1

Query: 251 KHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDRIRDVLVKRIGQQLEEASVND 310
           + R+I+E++V ++P  K SVSC FL++LL+  I ++    +   L KR+G Q E+A++ D
Sbjct: 151 EQRMIIESLVSIIPPQKDSVSCSFLLRLLRMAIMLKVAPALVTELEKRVGMQFEQATLAD 330

Query: 311 ILIKAPDGEITMYDVGIVQKIVREFLMKDHN----------SEIELVGGGELEGIRKPGI 360
           +LI + +   TMYDV +VQ+++  F++++            S+ + +G G   G     I
Sbjct: 331 LLIPSYNKGETMYDVDLVQRLLEHFIVQEQTESSSPSRNSFSDKQHMGMGMGMGC----I 498

Query: 361 LSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKEH 420
           L+  +K  VA+L+D YL E+++D NL L  F  LAE +   +R   DGLYRAID+YLK H
Sbjct: 499 LN--AKARVARLVDSYLTEVSRDRNLSLTKFQVLAEALPESARTCDDGLYRAIDSYLKAH 672

Query: 421 PGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTA-ASSGTSTP 479
           P +S+ E+K +C++MDC+KLS+DA LHA QNERLP RV+VQVL  EQV+ + A + +S  
Sbjct: 673 PTLSEHERKRLCRVMDCQKLSIDACLHAAQNERLPLRVVVQVLFAEQVKISNALASSSVK 852

Query: 480 DIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLR 527
           D+    +  ++ +N  +    T   +        +++  L+ EL S++
Sbjct: 853 DVES--ESHAMVTNRKTLLEGTPQSFQEGWTAAKKDINTLKFELESVK 990


>TC208509 similar to UP|Q9LRP8 (Q9LRP8) Non-phototropic hypocotyl-like
           protein, partial (63%)
          Length = 972

 Score =  181 bits (459), Expect = 8e-46
 Identities = 111/289 (38%), Positives = 162/289 (55%), Gaps = 13/289 (4%)
 Frame = +3

Query: 194 WVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKG--------MIP 245
           W +D C +++D     +++IK K +++ D+IG  +  YA   LP+ S             
Sbjct: 6   WFDDACIVDMDYLVKTLSSIKQKGVRA-DLIGSIITHYASIWLPDLSSSAENGVTTHFQS 182

Query: 246 CEDVS----KHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDRIRDVLVKRIGQ 301
            E V+    K R  VET+V +LP +K SV C FL++LL+    V  +   R  L  RI  
Sbjct: 183 PESVTNSWMKKRFFVETLVSVLPPEKDSVPCNFLLRLLRTANMVRVDATYRGELENRISW 362

Query: 302 QLEEASVNDILIKAPDGEI-TMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPGI 360
           QL++AS+ +++I +      T+ DV +V ++V+ F+  D +                   
Sbjct: 363 QLDQASLKELMIPSFSHTCGTLLDVELVLRLVKRFMSLDRDG------------------ 488

Query: 361 LSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKEH 420
              A+ + VAKL+D YLAE A D NL L  F+ LA  +   SR + DGLYRAIDTYLK H
Sbjct: 489 ---AALVKVAKLVDCYLAEAAVDANLTLSEFIALAGALPSHSRATDDGLYRAIDTYLKAH 659

Query: 421 PGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVR 469
           P +SK E+K +C+L+D RKL+ +ASLHA QNERLP R ++QVL  EQ +
Sbjct: 660 PDVSKQERKGLCRLLDSRKLTTEASLHAAQNERLPVRAVIQVLFSEQTK 806


>TC222625 similar to GB|BAB11327.1|10177916|AB016886
           photoreceptor-interacting protein-like {Arabidopsis
           thaliana;} , partial (31%)
          Length = 663

 Score =  178 bits (452), Expect = 5e-45
 Identities = 88/220 (40%), Positives = 134/220 (60%), Gaps = 7/220 (3%)
 Frame = +3

Query: 51  IQISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVF 110
           +++ DIPGG  AFE+CAKFCYG+ + ++A+N ++  CAA++L M+++IEKGN + K++ F
Sbjct: 33  LELHDIPGGEDAFELCAKFCYGIAINISAHNFVSALCAAKFLRMNDSIEKGNFVGKLESF 212

Query: 111 LSSSIFRSWKDSIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKK 170
            +S I   WKDSI  LQTT ++    E   +V +CI+SI  K      +V WSYTY R  
Sbjct: 213 FNSCILEGWKDSIATLQTTATLPEWSENLGIVRKCIDSIIEKILTPPPQVKWSYTYTRP- 389

Query: 171 LPEENGFESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKA 230
                G+   Q+     +VPKDWW ED+ +L++D+++ +I  I++  +    +IGEAL  
Sbjct: 390 -----GYTKKQH----HSVPKDWWTEDVSDLDIDLFRCIIMAIRSTYVLPPQLIGEALHV 542

Query: 231 YAYRKLPNFSKGMIPCEDVS-------KHRLIVETIVKLL 263
           YA R LP  +K    C   S       K+R I+ETIV ++
Sbjct: 543 YACRWLPGLTKIKSSCSSASQTEESKEKNRKILETIVSMI 662


>BI497474 similar to GP|15451228|gb| photoreceptor-interacting protein-like
           {Arabidopsis thaliana}, partial (16%)
          Length = 426

 Score =  172 bits (437), Expect = 3e-43
 Identities = 87/142 (61%), Positives = 109/142 (76%)
 Frame = +3

Query: 310 DILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPGILSDASKLMV 369
           D+LI+AP G+ T++ V IVQ++V EF+      + + +   E + IR PG++SD SK  V
Sbjct: 3   DLLIRAPVGD-TIFYVDIVQRLVEEFVACGQQVQTDSLLEDEFQEIRSPGMVSDPSKAKV 179

Query: 370 AKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKEHPGISKGEKK 429
           AKL+DGYLAEIA+DPNLPL  FVNLAELVS  +R SHDGLYRAID YLKEHPGISK E+K
Sbjct: 180 AKLVDGYLAEIARDPNLPLAKFVNLAELVSSFTRASHDGLYRAIDMYLKEHPGISKSERK 359

Query: 430 SICQLMDCRKLSVDASLHAVQN 451
            IC+LM+CR LS +A +HAVQN
Sbjct: 360 KICRLMNCRNLSAEACMHAVQN 425


>TC218139 similar to UP|Q93Y14 (Q93Y14) Photoreceptor-interacting
           protein-like, partial (15%)
          Length = 1001

 Score =  157 bits (396), Expect = 2e-38
 Identities = 95/188 (50%), Positives = 123/188 (64%), Gaps = 6/188 (3%)
 Frame = +2

Query: 425 KGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVR-TAASSGTSTPDIAK 483
           K EKK IC+LM+CRKLS +A +HAVQNERLP RV+VQVL FEQ+R T +S G  TPD + 
Sbjct: 2   KSEKKRICRLMNCRKLSAEACMHAVQNERLPMRVVVQVLFFEQLRATTSSGGNGTPDHSG 181

Query: 484 GIK-DLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGV----GNSFKD 538
            I+  L  GS+GSSRS     E + +  GT E++K+L+ EL +L+ S G       S  +
Sbjct: 182 SIRASLPGGSHGSSRS-----EEEWEAVGTMEDIKSLKGELIALKLSGGTRGASSRSNNN 346

Query: 539 GDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPS 598
             +K N +     KMKGL+ SKK   K+W+SK   GE S SD+SES  S   EE KSTPS
Sbjct: 347 DSSKGNSESVAASKMKGLV-SKKIISKIWSSKERSGELSSSDTSESPASTVVEETKSTPS 523

Query: 599 RNRRNSVS 606
           R+RR+S+S
Sbjct: 524 RSRRHSLS 547


>TC230833 
          Length = 732

 Score =  150 bits (380), Expect = 1e-36
 Identities = 93/217 (42%), Positives = 125/217 (56%), Gaps = 12/217 (5%)
 Frame = +1

Query: 295 LVKRIGQQLEEASVNDILIKAPDGEI-TMYDVGIVQKIVREFLMKDHNSEIELVGGGELE 353
           L KRIG QL++A++  +L+      + T+Y+V  VQ+I+  FL  D           ++ 
Sbjct: 52  LEKRIGMQLDQATLEGLLMPNFSYSMETLYNVDCVQRILDHFLAMD-----------QVT 198

Query: 354 GIRKPGILSDASKL---------MVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRP 404
           G   P  + D   +         MVAKLIDGYLAE+A D NL L  F  LA  V   +RP
Sbjct: 199 GCASPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDINLKLPKFQALAAAVPEYARP 378

Query: 405 SHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLH 464
             DGLYRAID YLK HP + + E++ +C+LMDC+KLS++A  HA QNERLP R+IVQVL 
Sbjct: 379 LDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLF 558

Query: 465 FE--QVRTAASSGTSTPDIAKGIKDLSIGSNGSSRSG 499
           FE  Q+RT+ +      D   G + L  G  GS+  G
Sbjct: 559 FEQLQLRTSIAGCFLVSDNLDGSRQLRSGFVGSTEGG 669


>TC213886 
          Length = 718

 Score =  142 bits (357), Expect = 6e-34
 Identities = 76/229 (33%), Positives = 131/229 (57%)
 Frame = +2

Query: 8   ELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASAFEICA 67
           E+ SD+ V +G+  F LHKFPL+SKS ++ KL+S  + ++++ I++ D+PGGA AFE+  
Sbjct: 44  EILSDVTVQVGEVSFSLHKFPLVSKSGYIGKLVS-ESSDDVSFIELYDVPGGAEAFELAT 220

Query: 68  KFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDSIILLQ 127
           KFCYG+   ++  N+   RC AEY GM E+   GNL+ ++D +L+    ++   ++ +L 
Sbjct: 221 KFCYGINFEISVENIATLRCVAEYFGMTEDYSVGNLVGRVDSYLNEVALKTISGAVSILH 400

Query: 128 TTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQNGVRTR 187
            ++   P+ E+ K+V+RCI++IA  A    SK     +  R  +   +G  S+Q  V   
Sbjct: 401 MSERFLPIAEKAKLVSRCIDAIAFIA----SKETQFCSPMRGDIIGTDGMASHQRPV--- 559

Query: 188 NVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKL 236
                WW EDL  L +D+++ V+  +  +  +    +G  +  YA + L
Sbjct: 560 ---VHWWAEDLTVLRIDIFQRVLIAMMARGFK-QFALGPIIMLYAQKSL 694


>TC209886 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (39%)
          Length = 844

 Score =  138 bits (348), Expect = 6e-33
 Identities = 76/231 (32%), Positives = 125/231 (53%)
 Frame = +1

Query: 6   ASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASAFEI 65
           + ++ +D+IV +G+T F LHKF L++KS++++KLI  +NE  +  I +SDIPGG S FE 
Sbjct: 127 SQDIPTDVIVEVGETIFSLHKFMLVAKSNYIRKLILESNEGELTRIDLSDIPGGPSIFEK 306

Query: 66  CAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDSIIL 125
            AKFCYG+   +  +NV   RCAAE+L M +   + NL  + + FL+   F +   ++ +
Sbjct: 307 TAKFCYGVNFEITVHNVAVLRCAAEFLQMTDQYCENNLAGRTEEFLTQVAFFTLTGAVTV 486

Query: 126 LQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQNGVR 185
           L++ + + P  ++  VV RC+E+++ KAC                   E  F S      
Sbjct: 487 LKSCRHLLPYADDINVVKRCVEAVSAKAC------------------SEANFPSRS---- 600

Query: 186 TRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKL 236
               P +WW E+L  L++D +  VI  +K +  ++   +  AL  Y  R L
Sbjct: 601 ----PPNWWTEELALLDIDFFARVIDAMKQRSAKAL-TVAAALITYTERAL 738


>TC231319 similar to UP|Q9LFU0 (Q9LFU0) Non-phototropic hypocotyl 3-like
           protein, partial (31%)
          Length = 897

 Score =  134 bits (336), Expect = 2e-31
 Identities = 79/209 (37%), Positives = 115/209 (54%)
 Frame = +2

Query: 319 EITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPGILSDASKLMVAKLIDGYLA 378
           E TM D+ +VQ+IV  FLM +           +++  +K        K  +++L+D YLA
Sbjct: 50  ECTMLDIDVVQRIVEYFLMHEQQ---------QIQQQQK------TRKFNISRLLDNYLA 184

Query: 379 EIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCR 438
           EIA+DPNL +  F   AEL+   +R   DGLYRAIDTYLK  P +++ ++K +C++M+C 
Sbjct: 185 EIARDPNLSITKFQVFAELLPENTRSYDDGLYRAIDTYLKTQPSLTEHDRKRLCKIMNCE 364

Query: 439 KLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTSTPDIAKGIKDLSIGSNGSSRS 498
           KLS+DA LHA QNERLP R +VQ+L  EQV+  A+     P          IG       
Sbjct: 365 KLSLDACLHAAQNERLPLRTVVQILFSEQVKMRAAMHEKEP--------AQIGIQSEQEG 520

Query: 499 GTTNPEYDTDGAGTAEELKALRKELASLR 527
             T+   D         +KAL+ EL +++
Sbjct: 521 NHTSATMD---------IKALKAELENVK 580


>TC207970 weakly similar to UP|Q94A73 (Q94A73) AT5g66560/K1F13_23, partial
           (16%)
          Length = 1114

 Score =  130 bits (327), Expect = 2e-30
 Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 5/212 (2%)
 Frame = +1

Query: 321 TMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPGILSDASKLMVAKLIDGYLAEI 380
           T++DV  VQ+I+  +L     +   LV   + E    P   SD  +  V KL++ Y+AEI
Sbjct: 46  TLFDVDTVQRIMSNYLESQTGNH--LVFNADDEYFSPPQ--SDMER--VGKLMENYIAEI 207

Query: 381 AKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKL 440
           A D NL +  F +LAEL+   SRP+ DG+YRAID +LK HP +S  ++K +C +MDC+KL
Sbjct: 208 ATDRNLAVTKFTSLAELIPEQSRPTEDGMYRAIDIFLKAHPALSDMDRKKVCSVMDCQKL 387

Query: 441 SVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTSTPDIAKGIKDLSIGSNGSSRSGT 500
           S +A  HA QN+RLP + +VQVL++EQ R                  L    NG SRSG 
Sbjct: 388 SREACAHAAQNDRLPVQTVVQVLYYEQQR------------------LRNAMNG-SRSGE 510

Query: 501 TNPE-----YDTDGAGTAEELKALRKELASLR 527
           ++ +     Y TD    + EL  LR+E   L+
Sbjct: 511 SSVDSKLNVYSTDLHPVSNELSTLRRENEDLK 606


>TC234775 similar to UP|Q9FMF5 (Q9FMF5) Non-phototropic hypocotyl 3, partial
           (16%)
          Length = 499

 Score =  123 bits (309), Expect = 2e-28
 Identities = 55/107 (51%), Positives = 80/107 (74%)
 Frame = +1

Query: 4   YVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASAF 63
           YVA+++ SD +V IG+  F+LHK+PL+S+S  L ++I  +++ ++N+I I DIPGG  AF
Sbjct: 178 YVATDIPSDFLVQIGEANFHLHKYPLVSRSGKLSRVIYESHDPDLNKIVIDDIPGGEEAF 357

Query: 64  EICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVF 110
           E+ AKFCYG+ V L A N+   RCAAEYL M E++E+GNL+FK + F
Sbjct: 358 ELAAKFCYGIAVDLTAGNISGLRCAAEYLEMTEDLEEGNLIFKAEAF 498


>TC230959 similar to UP|Q9SPB4 (Q9SPB4) Non-phototropic hypocotyl 3, partial
           (26%)
          Length = 944

 Score =  119 bits (298), Expect = 4e-27
 Identities = 84/248 (33%), Positives = 126/248 (49%), Gaps = 13/248 (5%)
 Frame = +1

Query: 372 LIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKEHPGISKGEKKSI 431
           L+D YL E+++D NL L  F  L+E +   +R S DGLYRAID+YLK HP +++ E+K +
Sbjct: 10  LVDSYLTEVSRDRNLSLTKFQVLSEALPESARTSDDGLYRAIDSYLKAHPTLTEHERKRL 189

Query: 432 CQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVR--TAASSGTSTPDIAKGIKDLS 489
           C++MDC+KLS+DA +HA QNERLP RV+VQVL  EQV+   A ++  S  + A+      
Sbjct: 190 CRVMDCQKLSIDACMHAAQNERLPLRVVVQVLFSEQVKISNALANNGSLKEGAESHYQPM 369

Query: 490 IGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELAS-----LRQSNGVGNSFKDGDAKPN 544
           I +  +   GT    +        +++  L+ EL +     L   N + N  K  D    
Sbjct: 370 IPNRKTLLEGTPQ-SFQEGWTAAKKDINTLKFELETVKTKYLELQNDMENLQKHFDK--- 537

Query: 545 MDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNP------EEVKSTPS 598
                      LLK K +    W S           ++E    ++P      E+ + T +
Sbjct: 538 -----------LLKQKHT--SAWTSGWKKLSKLTKMTNEENHDISPQIPTSEEQNRKTTT 678

Query: 599 RNRRNSVS 606
           R  RNS+S
Sbjct: 679 RRWRNSIS 702


>TC231995 similar to GB|BAB11327.1|10177916|AB016886
           photoreceptor-interacting protein-like {Arabidopsis
           thaliana;} , partial (19%)
          Length = 918

 Score =  117 bits (292), Expect = 2e-26
 Identities = 78/240 (32%), Positives = 119/240 (49%), Gaps = 6/240 (2%)
 Frame = +2

Query: 369 VAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKEHPGISKGEK 428
           V KLID YL  +A+D N+P+  FV+LAE V  I R  HD LY+AI+ YLK HP +SK +K
Sbjct: 155 VGKLIDSYLQVVARDDNMPVSKFVSLAETVPAIGRL*HDDLYQAINIYLKVHPDLSKADK 334

Query: 429 KSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVR----TAASSGTSTPDIAKG 484
           K +C +++C+KL+ +   HAV+NE LP R +VQ+L+FEQ +    T +S    + D+  G
Sbjct: 335 KRLCGILECQKLTPEVRAHAVKNEFLPLRTVVQLLYFEQEKDSKETTSSKLQKSHDLLLG 514

Query: 485 IKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSFKDGDAKPN 544
            K      +   +    N E  T     AE            R+         DG    +
Sbjct: 515 AKKRPATRDSHGKRSLVNKEEVTRRISHAES-----------REKGQHKTKRSDGKLALD 661

Query: 545 MDK--AVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPSRNRR 602
           ++K  A+ G  + ++ S+K        +G   E   S +S+     N +  +S  S + R
Sbjct: 662 LEKKMAIRGDTEDIIGSEK-------LRGAKDERMSSSNSDLDTKKNIQRARSKKSEHGR 820


>TC229238 similar to UP|Q9M6N8 (Q9M6N8) RPT2, partial (40%)
          Length = 1111

 Score =  107 bits (267), Expect = 2e-23
 Identities = 85/317 (26%), Positives = 148/317 (45%), Gaps = 7/317 (2%)
 Frame = +3

Query: 297 KRIGQQLEEASVNDILIK--APDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEG 354
           KR+ + LE  +V+D+L+   + DGE  + D+  V++I+  F+ ++  + +   G    E 
Sbjct: 6   KRVTEILEHVTVDDLLVLTFSYDGE-RLLDLDSVRRIISGFVEREKGTTVFNAGVNFNED 182

Query: 355 IRKPGILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAID 414
                    A+   VAK +D YLAEIA    L +  F  +A L+ + +R S D LYRA+D
Sbjct: 183 F-------SATMQRVAKTVDSYLAEIAAYAELSISKFNGIAILIPKGARKSDDDLYRAVD 341

Query: 415 TYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASS 474
            YLK HP + + EK+ +C ++D  KLS +A +HA +N+RLP ++++  L+++Q++     
Sbjct: 342 IYLKVHPNLDEIEKEKVCSVLDTLKLSYEARVHASKNKRLPLQIVLHALYYDQLQI---- 509

Query: 475 GTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGN 534
                                 RSGT     D      A E K L+ +++ +R++  + +
Sbjct: 510 ----------------------RSGTA---ADKQAVVAAAEKKQLQADVSLVRENEELRS 614

Query: 535 SFKD-----GDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVN 589
                     D + N+        + +  +KK       SK     N   + S+    ++
Sbjct: 615 ELMKMKMFISDLQKNVHGTSSSGRENIGPTKKPTFFSSMSKKLSKLNPFKNGSKDTSHID 794

Query: 590 PEEVKSTPSRNRRNSVS 606
              V  T  R RR S+S
Sbjct: 795 DAPVDLTKPRKRRFSIS 845


>BM085556 
          Length = 426

 Score =  103 bits (258), Expect = 2e-22
 Identities = 51/131 (38%), Positives = 82/131 (61%)
 Frame = +3

Query: 8   ELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASAFEICA 67
           E+ +D+IV++G T F LHKF L +KS++++K+I  + E ++  I+ISDIPGG+ AFE  A
Sbjct: 30  EIPTDVIVAVGQTNFSLHKFILAAKSNYVRKVIMESEESDLTRIEISDIPGGSEAFEKAA 209

Query: 68  KFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDSIILLQ 127
           KFCYG+   +  +NV A  CAA +L M +    GNL  + + FLS     +   ++ +L+
Sbjct: 210 KFCYGVNFEITVHNVAALHCAAVFLQMTDEYCDGNLAGRTEDFLSQVGLSTLHSAVAVLK 389

Query: 128 TTKSMSPLDEE 138
           + + + P   E
Sbjct: 390 SCQKILPFAAE 422


>AW781720 
          Length = 366

 Score =  100 bits (248), Expect = 2e-21
 Identities = 52/95 (54%), Positives = 67/95 (69%)
 Frame = +3

Query: 409 LYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQV 468
           LYRAID YLK HP +SK E+K +C+++DC+KLS++A +HA QNE LP RV+VQVL FEQV
Sbjct: 6   LYRAIDIYLKAHPELSKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQV 185

Query: 469 RTAASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNP 503
           R AA+ G    D+   IK L + +NG   S  T P
Sbjct: 186 RAAAAGG-KVSDMPSNIKAL-LTANGIDPSKHTAP 284


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.315    0.133    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,703,336
Number of Sequences: 63676
Number of extensions: 284938
Number of successful extensions: 1138
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of query: 606
length of database: 12,639,632
effective HSP length: 103
effective length of query: 503
effective length of database: 6,081,004
effective search space: 3058745012
effective search space used: 3058745012
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)


Medicago: description of AC146551.5