BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146343.9 + phase: 0
(436 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC207996 UP|Q6T2Z5 (Q6T2Z5) WD-repeat cell cycle regulatory prot... 315 3e-86
CA782170 243 9e-65
TC208265 similar to UP|Q6S7B0 (Q6S7B0) TAF5, partial (36%) 76 3e-14
TC208379 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana geno... 68 9e-12
TC220739 weakly similar to UP|PRP4_HUMAN (O43172) U4/U6 small nu... 66 3e-11
TC220018 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana geno... 65 6e-11
TC228794 similar to UP|Q6V8V0 (Q6V8V0) Transducin-like (Fragment... 62 7e-10
TC209377 similar to UP|Q9FLX9 (Q9FLX9) Notchless protein homolog... 60 1e-09
TC228105 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {A... 59 3e-09
TC207353 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat prot... 58 1e-08
TC207267 similar to UP|Q8GTM1 (Q8GTM1) WD40, partial (53%) 57 1e-08
TC229097 similar to PIR|T46032|T46032 WD-40 repeat regulatory pr... 55 5e-08
TC204561 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-... 55 6e-08
TC207354 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat prot... 53 2e-07
TC205059 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-... 52 7e-07
TC208434 similar to PIR|T01391|T01391 WD-repeat protein T4I9.10 ... 52 7e-07
TC205974 homologue to UP|Q94KS2 (Q94KS2) TGF-beta receptor-inter... 51 9e-07
TC220562 similar to UP|Q9LV35 (Q9LV35) WD40-repeat protein, part... 50 2e-06
TC209542 50 2e-06
TC208554 UP|Q9FUF3 (Q9FUF3) FAS2, complete 49 3e-06
>TC207996 UP|Q6T2Z5 (Q6T2Z5) WD-repeat cell cycle regulatory protein,
complete
Length = 2059
Score = 315 bits (806), Expect = 3e-86
Identities = 153/330 (46%), Positives = 212/330 (63%)
Frame = +1
Query: 96 PRSKPMRYIPKTCEGTFDLPDLSDDFSLNLLDWGSRNVLSIALDHTIYFWNASDSSGSEF 155
P KP R +PKT D P L DDF LNL+DW ++NVL++ L +Y W+AS+S ++
Sbjct: 664 PAPKPPRKVPKTPHKGLDAPSLQDDFYLNLVDWSTQNVLAVGLGTGVYLWSASNSKVTKL 843
Query: 156 VTVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTAANKQLRTLKGGHRARVGSLAWNG 215
+ +G V SV W +G +++G VQ+WD K++RT+ GGH+ R G LAWN
Sbjct: 844 CDLGPYDG-VCSVQWTREGSFISIGTNLGQVQVWDGTQCKKVRTM-GGHQTRTGVLAWNS 1017
Query: 216 HVLTTGGMDGKIVNNDVRLRSQIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDM 275
+L +G D I+ +D+R+ ++ GH+ EVCGLKWS D ++LASGGNDN + +W+
Sbjct: 1018RILASGSRDRNILQHDMRVPGDFVSKLVGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQ 1197
Query: 276 SAVSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLLASGGGGGDCCVKLWNTGMGERMNSV 335
S P + R EH AAVKA+AW P Q +LL SGGG D C++ WNT G ++N V
Sbjct: 1198H---SQQP---VLRLTEHTAAVKAIAWSPHQSSLLVSGGGTADRCIRFWNTTNGHQLNCV 1359
Query: 336 DTGSQVCALLWSKNERELLSSHGLTQNQLTLWKYPSMLKIAELHGHTSRVLHMTQSPDGS 395
DTGSQVC L WSKN EL+S+HG +QNQ+ +WKYPS+ K+A L GH+ RVL++ SPDG
Sbjct: 1360DTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLTKVATLTGHSMRVLYLAMSPDGQ 1539
Query: 396 TVASAAAAADQTLRFWEVFGTPPAAPPKRN 425
T+ + A D+TLRFW VF + A P ++
Sbjct: 1540TIVT--GAGDETLRFWNVFPSMKAPAPVKD 1623
>CA782170
Length = 456
Score = 243 bits (621), Expect = 9e-65
Identities = 113/153 (73%), Positives = 131/153 (84%)
Frame = +3
Query: 268 NVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLLASGGGGGDCCVKLWNTG 327
N+++IWD + SSNS T+WL+R ++H +AVKALAWCPFQGNLLASGGG GD C+K WNT
Sbjct: 3 NLLYIWDRATASSNSATQWLHRLEDHTSAVKALAWCPFQGNLLASGGGSGDRCIKFWNTH 182
Query: 328 MGERMNSVDTGSQVCALLWSKNERELLSSHGLTQNQLTLWKYPSMLKIAELHGHTSRVLH 387
G +NS+DTGSQVC+LLW+KNERELLSSHG TQNQLTLWKYPSM+K+AEL+GHTSRVL
Sbjct: 183 TGACLNSIDTGSQVCSLLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLF 362
Query: 388 MTQSPDGSTVASAAAAADQTLRFWEVFGTPPAA 420
M QSPDG TVAS AAAD+TLRFW VFG P AA
Sbjct: 363 MAQSPDGCTVAS--AAADETLRFWNVFGAPEAA 455
Score = 33.5 bits (75), Expect = 0.19
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Frame = +3
Query: 142 IYFWN---ASDSSGSEFV-TVDEEEGPVTSVCWAP-DGRHLAVGLTNSH--VQLWDTAAN 194
+Y W+ AS +S ++++ +++ V ++ W P G LA G + ++ W+T
Sbjct: 9 LYIWDRATASSNSATQWLHRLEDHTSAVKALAWCPFQGNLLASGGGSGDRCIKFWNTHTG 188
Query: 195 KQLRTLKGGHRARVGSLAWNGHVLTTGGMDGKIVNNDV--RLRSQI-INTYRGHRREVCG 251
L ++ G ++V SL WN + G N + S + + GH V
Sbjct: 189 ACLNSIDTG--SQVCSLLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLF 362
Query: 252 LKWSLDGKQLASGGNDNVVHIWDM 275
+ S DG +AS D + W++
Sbjct: 363 MAQSPDGCTVASAAADETLRFWNV 434
>TC208265 similar to UP|Q6S7B0 (Q6S7B0) TAF5, partial (36%)
Length = 1048
Score = 75.9 bits (185), Expect = 3e-14
Identities = 57/206 (27%), Positives = 96/206 (45%), Gaps = 2/206 (0%)
Frame = +2
Query: 133 VLSIALDHTIYFWNASDSSGSEFVTVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTA 192
+LS + D TI W S + V PV V ++P G + A + ++W
Sbjct: 32 ILSSSADSTIRLW--STKLNANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMD 205
Query: 193 ANKQLRTLKGGHRARVGSLAW--NGHVLTTGGMDGKIVNNDVRLRSQIINTYRGHRREVC 250
+ LR + GH + V + W N + + TG D + DV+ + + + GHR +
Sbjct: 206 RIQPLRIM-AGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQ-SGECVRVFVGHRGMIL 379
Query: 251 GLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLL 310
L S DG+ +ASG D + +WD+S+ R L H + V +LA+ +G+++
Sbjct: 380 SLAMSPDGRYMASGDEDGTIMMWDLSS------GRCLTPLIGHTSCVWSLAFSS-EGSVI 538
Query: 311 ASGGGGGDCCVKLWNTGMGERMNSVD 336
AS G DC VKLW+ +++ +
Sbjct: 539 AS--GSADCTVKLWDVNTSTKVSRAE 610
Score = 34.3 bits (77), Expect = 0.11
Identities = 42/189 (22%), Positives = 64/189 (33%), Gaps = 4/189 (2%)
Frame = +2
Query: 229 NNDVRLRSQIINT----YRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPT 284
++ +RL S +N Y+GH V +++S G AS +D IW M + P
Sbjct: 50 DSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMDRIQ---PL 220
Query: 285 RWLYRFDEHKAAVKALAWCPFQGNLLASGGGGGDCCVKLWNTGMGERMNSVDTGSQVCAL 344
R + H + V + W N G D V+LW D S C
Sbjct: 221 RIMAG---HLSDVDCVQW---HANCNYIATGSSDKTVRLW-----------DVQSGECVR 349
Query: 345 LWSKNERELLSSHGLTQNQLTLWKYPSMLKIAELHGHTSRVLHMTQSPDGSTVASAAAAA 404
++ GH +L + SPDG +AS
Sbjct: 350 VFV--------------------------------GHRGMILSLAMSPDGRYMAS--GDE 427
Query: 405 DQTLRFWEV 413
D T+ W++
Sbjct: 428 DGTIMMWDL 454
>TC208379 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K8K14 (AT5g67320/K8K14_4),
partial (42%)
Length = 1062
Score = 67.8 bits (164), Expect = 9e-12
Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 9/255 (3%)
Frame = +2
Query: 157 TVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTAANKQLRTLKGGHRARVGSLAWNGH 216
T+ + +GP+ S+ W G ++ G + +WD A + + + H + W +
Sbjct: 20 TLSKHKGPIFSLKWNKKGDYILTGSCDQTAIVWDVKAEEWKQQFEF-HSGWTLDVDWRNN 196
Query: 217 V-LTTGGMDGKIVNNDVRLRSQI-INTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWD 274
V T D KI + ++ ++ I T+ GH+ EV +KW G LAS +D IW
Sbjct: 197 VSFATSSTDTKI--HVCKIGEKLPIRTFVGHQSEVNCIKWDPTGSLLASCSDDMTAKIWS 370
Query: 275 MSAVSSNSPTRWLYRFDEHKAAVKALAWCPF------QGNLLASGGGGGDCCVKLWNTGM 328
M ++L+ F EH + + W P L D VKLW+ +
Sbjct: 371 M------KQDKYLHEFREHSKEIYTIRWSPTGPGTNNPNKNLVLASASFDSTVKLWDVEL 532
Query: 329 GERMNSVD-TGSQVCALLWSKNERELLSSHGLTQNQLTLWKYPSMLKIAELHGHTSRVLH 387
G+ + S++ +V ++ +S N + S G + +W KI + + +
Sbjct: 533 GKLLYSLNGHRDRVYSVAFSPNGEYIAS--GSPDRSMLIWSLKEG-KIVKTYTGDGGIFE 703
Query: 388 MTQSPDGSTVASAAA 402
+ + +G +A+ A
Sbjct: 704 VCWNKEGDKIAACFA 748
Score = 46.6 bits (109), Expect = 2e-05
Identities = 43/220 (19%), Positives = 86/220 (38%), Gaps = 43/220 (19%)
Frame = +2
Query: 237 QIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSA------------------- 277
++ +T H+ + LKW+ G + +G D +WD+ A
Sbjct: 8 ELKSTLSKHKGPIFSLKWNKKGDYILTGSCDQTAIVWDVKAEEWKQQFEFHSGWTLDVDW 187
Query: 278 ------VSSNSPTRW----------LYRFDEHKAAVKALAWCPFQGNLLASGGGGGDCCV 321
+S++ T+ + F H++ V + W P G+LLAS D
Sbjct: 188 RNNVSFATSSTDTKIHVCKIGEKLPIRTFVGHQSEVNCIKWDP-TGSLLAS--CSDDMTA 358
Query: 322 KLWNTGMGERMNSV-DTGSQVCALLWSKN-------ERELLSSHGLTQNQLTLWKYPSML 373
K+W+ + ++ + ++ + WS + L+ + + + LW
Sbjct: 359 KIWSMKQDKYLHEFREHSKEIYTIRWSPTGPGTNNPNKNLVLASASFDSTVKLWDVELGK 538
Query: 374 KIAELHGHTSRVLHMTQSPDGSTVASAAAAADQTLRFWEV 413
+ L+GH RV + SP+G +AS + D+++ W +
Sbjct: 539 LLYSLNGHRDRVYSVAFSPNGEYIAS--GSPDRSMLIWSL 652
>TC220739 weakly similar to UP|PRP4_HUMAN (O43172) U4/U6 small nuclear
ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDa protein) (WD
splicing factor Prp4) (hPrp4), partial (34%)
Length = 1206
Score = 66.2 bits (160), Expect = 3e-11
Identities = 50/196 (25%), Positives = 85/196 (42%), Gaps = 2/196 (1%)
Frame = +1
Query: 132 NVLSIALDHTIYFWNASDSSGSEFVTVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDT 191
++ + + D T +WN GS T + + + + P G++L + +LWD
Sbjct: 241 HLATASADRTAKYWN----QGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDI 408
Query: 192 AANKQLRTLKGGHRARVGSLAWN--GHVLTTGGMDGKIVNNDVRLRSQIINTYRGHRREV 249
+L L+ GH V LA++ G + + G+D D+R I+ GH + V
Sbjct: 409 ETGDEL-LLQEGHSRSVYGLAFHNDGSLAASCGLDSLARVWDLRTGRSIL-ALEGHVKPV 582
Query: 250 CGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCPFQGNL 309
G+ +S +G LA+GG DN IWD+ S Y H + + + P +G
Sbjct: 583 LGISFSPNGYHLATGGEDNTCRIWDLRKKKS------FYTIPAHSNLISQVKFEPHEGYF 744
Query: 310 LASGGGGGDCCVKLWN 325
L + D K+W+
Sbjct: 745 LVT--ASYDMTAKVWS 786
Score = 48.9 bits (115), Expect = 4e-06
Identities = 59/295 (20%), Positives = 112/295 (37%), Gaps = 44/295 (14%)
Frame = +1
Query: 161 EEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTAANKQLRTLKG------------------ 202
++ P++ ++ DG+ LA +LW K+ KG
Sbjct: 70 DDRPLSGCSFSRDGKWLATCSLTGASKLWSMPKIKKHSIFKGHTERATDVAYSPVHDHLA 249
Query: 203 ---------------------GHRARVGSLAW--NGHVLTTGGMDGKIVNNDVRLRSQII 239
GH R+ +A+ +G L T D D+ +++
Sbjct: 250 TASADRTAKYWNQGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGDELL 429
Query: 240 NTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKA 299
GH R V GL + DG AS G D++ +WD+ R + + H V
Sbjct: 430 -LQEGHSRSVYGLAFHNDGSLAASCGLDSLARVWDLRT------GRSILALEGHVKPVLG 588
Query: 300 LAWCPFQGNLLASGGGGGDCCVKLWNTGMGERMNSVDTGSQ-VCALLWSKNERELL--SS 356
+++ P G LA+GG C ++W+ + ++ S + + + +E L +S
Sbjct: 589 ISFSP-NGYHLATGGEDNTC--RIWDLRKKKSFYTIPAHSNLISQVKFEPHEGYFLVTAS 759
Query: 357 HGLTQNQLTLWKYPSMLKIAELHGHTSRVLHMTQSPDGSTVASAAAAADQTLRFW 411
+ +T +W + L GH ++V + DG ++ + + D+T++ W
Sbjct: 760 YDMTAK---VWSGRDFKPVKTLSGHEAKVTSVDVLGDGGSIVT--VSHDRTIKLW 909
Score = 44.7 bits (104), Expect = 8e-05
Identities = 49/230 (21%), Positives = 86/230 (37%), Gaps = 21/230 (9%)
Frame = +1
Query: 111 TFDLPDLSDDFSLNLLDWGSRNVLSIA------------LDHTIYFWNASDSSGSEFVTV 158
T+ L D+ L L + SR+V +A LD W+ +G + +
Sbjct: 388 TWRLWDIETGDELLLQEGHSRSVYGLAFHNDGSLAASCGLDSLARVWDLR--TGRSILAL 561
Query: 159 DEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTAANKQLRTLKGGHRARVGSLAWNGH-- 216
+ PV + ++P+G HLA G ++ ++WD K T+ H + + + H
Sbjct: 562 EGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSFYTIPA-HSNLISQVKFEPHEG 738
Query: 217 ---VLTTGGMDGKIVNNDVRLRSQIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIW 273
V + M K+ + + + T GH +V + DG + + +D + +W
Sbjct: 739 YFLVTASYDMTAKVWSGR---DFKPVKTLSGHEAKVTSVDVLGDGGSIVTVSHDRTIKLW 909
Query: 274 DMSAVSSNSPTRWLYRFD----EHKAAVKALAWCPFQGNLLASGGGGGDC 319
SSN D E +K L WC + + DC
Sbjct: 910 -----SSNPTDEQAMDVD*AIFEGMQFMKGL*WCKLDKSFMLQTTA*HDC 1044
Score = 43.1 bits (100), Expect = 2e-04
Identities = 41/172 (23%), Positives = 71/172 (40%)
Frame = +1
Query: 242 YRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALA 301
++GH + +S LA+ D W+ ++ L F+ H + +A
Sbjct: 187 FKGHTERATDVAYSPVHDHLATASADRTAKYWNQGSL--------LKTFEGHLDRLARIA 342
Query: 302 WCPFQGNLLASGGGGGDCCVKLWNTGMGERMNSVDTGSQVCALLWSKNERELLSSHGLTQ 361
+ P G L G D +LW+ G+ + + S+ L N+ L +S GL
Sbjct: 343 FHP-SGKYL--GTASFDKTWRLWDIETGDELLLQEGHSRSVYGLAFHNDGSLAASCGL-D 510
Query: 362 NQLTLWKYPSMLKIAELHGHTSRVLHMTQSPDGSTVASAAAAADQTLRFWEV 413
+ +W + I L GH VL ++ SP+G +A+ D T R W++
Sbjct: 511 SLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLAT--GGEDNTCRIWDL 660
>TC220018 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K8K14 (AT5g67320/K8K14_4),
partial (42%)
Length = 1050
Score = 65.1 bits (157), Expect = 6e-11
Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 7/253 (2%)
Frame = +1
Query: 157 TVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTAANKQLRTLKGGHRARVGSLAWNGH 216
T+ + +GP+ S+ W G +L G + +WD A + + + H + W +
Sbjct: 16 TLSKHKGPIFSLKWNKKGDYLLTGSCDQTAIVWDVKAEEWKQQFEF-HSGPTLDVDWRNN 192
Query: 217 VLTTGGMDGKIVNNDVRLRSQIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMS 276
V +++ + I T+ GH+ EV +KW G LAS +D IW M
Sbjct: 193 VSFATSSTDNMIHVCKIGETHPIKTFTGHQGEVNCVKWDPTGSLLASCSDDITAKIWSM- 369
Query: 277 AVSSNSPTRWLYRFDEHKAAVKALAWCPF------QGNLLASGGGGGDCCVKLWNTGMGE 330
+L+ EH + + W P + L D VKLW+ +G+
Sbjct: 370 -----KQDTYLHDLREHSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWDVELGK 534
Query: 331 RMNSVDTGSQ-VCALLWSKNERELLSSHGLTQNQLTLWKYPSMLKIAELHGHTSRVLHMT 389
+ S+D V ++ +S N L+S G + +W KI + + + +
Sbjct: 535 LIYSLDGHRHPVYSVAFSPNGDYLVS--GSLDRSMHIWSLRDG-KIVKTYTGNGGIFEVC 705
Query: 390 QSPDGSTVASAAA 402
+ +G +A+ A
Sbjct: 706 WNKEGDKIAACFA 744
Score = 42.7 bits (99), Expect = 3e-04
Identities = 43/220 (19%), Positives = 78/220 (34%), Gaps = 43/220 (19%)
Frame = +1
Query: 237 QIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSA------------------- 277
++ +T H+ + LKW+ G L +G D +WD+ A
Sbjct: 4 ELKSTLSKHKGPIFSLKWNKKGDYLLTGSCDQTAIVWDVKAEEWKQQFEFHSGPTLDVDW 183
Query: 278 ----------------VSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLLASGGGGGDCCV 321
V T + F H+ V + W P G+LLAS D
Sbjct: 184 RNNVSFATSSTDNMIHVCKIGETHPIKTFTGHQGEVNCVKWDP-TGSLLAS--CSDDITA 354
Query: 322 KLWNTGMGERMNSV-DTGSQVCALLWSKN-------ERELLSSHGLTQNQLTLWKYPSML 373
K+W+ ++ + + ++ + WS +L+ + + + LW
Sbjct: 355 KIWSMKQDTYLHDLREHSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWDVELGK 534
Query: 374 KIAELHGHTSRVLHMTQSPDGSTVASAAAAADQTLRFWEV 413
I L GH V + SP+G + S + D+++ W +
Sbjct: 535 LIYSLDGHRHPVYSVAFSPNGDYLVS--GSLDRSMHIWSL 648
Score = 36.2 bits (82), Expect = 0.030
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +1
Query: 135 SIALDHTIYFWNASDSSGSEFVTVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTAAN 194
S + D T+ W+ G ++D PV SV ++P+G +L G + + +W
Sbjct: 484 SASFDSTVKLWDVE--LGKLIYSLDGHRHPVYSVAFSPNGDYLVSGSLDRSMHIWSLRDG 657
Query: 195 KQLRTLKGGHRARVGSLAWN 214
K ++T G + + WN
Sbjct: 658 KIVKTYTG--NGGIFEVCWN 711
>TC228794 similar to UP|Q6V8V0 (Q6V8V0) Transducin-like (Fragment), complete
Length = 870
Score = 61.6 bits (148), Expect = 7e-10
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 2/198 (1%)
Frame = +3
Query: 200 LKGGHRARVGSLAWN--GHVLTTGGMDGKIVNNDVRLRSQIINTYRGHRREVCGLKWSLD 257
L GH++ + ++ +N G V+ +G D +I +V + +GH+ V L W+ D
Sbjct: 264 LLSGHQSAIYTMKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTD 443
Query: 258 GKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLLASGGGGG 317
G Q+ S D V WD+ + + + EH + V + CP + G
Sbjct: 444 GTQIVSASPDKTVRAWDVET------GKQIKKMVEHLSYVNSC--CPSRRGPPLVVSGSD 599
Query: 318 DCCVKLWNTGMGERMNSVDTGSQVCALLWSKNERELLSSHGLTQNQLTLWKYPSMLKIAE 377
D KLW+ + + Q+ A+ +S ++ + G N + +W
Sbjct: 600 DGTAKLWDMRQRGSIQTFPDKYQITAVGFSDASDKIFT--GGIDNDVKIWDLRKGEVTMT 773
Query: 378 LHGHTSRVLHMTQSPDGS 395
L GH + M SPDGS
Sbjct: 774 LQGHQDMITAMQLSPDGS 827
Score = 30.4 bits (67), Expect = 1.6
Identities = 21/78 (26%), Positives = 35/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 337 TGSQVCALLWSKNERELLSSHGLTQNQLTLWKYPSMLK-IAELHGHTSRVLHMTQSPDGS 395
+G Q N + + G ++ LW K L GH + VL + + DG+
Sbjct: 270 SGHQSAIYTMKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGT 449
Query: 396 TVASAAAAADQTLRFWEV 413
+ S A+ D+T+R W+V
Sbjct: 450 QIVS--ASPDKTVRAWDV 497
>TC209377 similar to UP|Q9FLX9 (Q9FLX9) Notchless protein homolog
(At5g52820), partial (33%)
Length = 669
Score = 60.5 bits (145), Expect = 1e-09
Identities = 35/111 (31%), Positives = 59/111 (52%), Gaps = 2/111 (1%)
Frame = +2
Query: 165 VTSVCWAPDGRHLAVGLTNSHVQLWDTAANKQLRTLKGGHRARVGSLAWNG--HVLTTGG 222
V V ++PDG+ +A + V+LW+ K + +G H V ++W+ +L +G
Sbjct: 134 VNHVYFSPDGQWVASASFDKSVKLWNGTTGKFVTAFRG-HVGPVYQISWSADSRLLLSGS 310
Query: 223 MDGKIVNNDVRLRSQIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIW 273
D + D+R R ++ GH EV + WS DG+++ASGG D V+ +W
Sbjct: 311 KDSTLKVWDIRTR-KLKQDLPGHADEVFSVDWSPDGEKVASGGKDKVLKLW 460
Score = 51.2 bits (121), Expect = 9e-07
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Frame = +2
Query: 178 AVGLTNSHVQLWDTAANKQLRTLKGGHRARVGSLAWN--GHVLTTGGMDGKIVNNDVRLR 235
++ L S LW+ NK +T GH+ V + ++ G + + D K V
Sbjct: 44 SLDLMISLCSLWEPFINKHPKTRMTGHQQLVNHVYFSPDGQWVASASFD-KSVKLWNGTT 220
Query: 236 SQIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYR-FDEHK 294
+ + +RGH V + WS D + L SG D+ + +WD+ TR L + H
Sbjct: 221 GKFVTAFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIR-------TRKLKQDLPGHA 379
Query: 295 AAVKALAWCPFQGNLLASGGGGGDCCVKLW 324
V ++ W P G +AS GG D +KLW
Sbjct: 380 DEVFSVDWSP-DGEKVAS--GGKDKVLKLW 460
Score = 45.4 bits (106), Expect = 5e-05
Identities = 30/95 (31%), Positives = 46/95 (47%), Gaps = 3/95 (3%)
Frame = +2
Query: 133 VLSIALDHTIYFWNASDSSGSEFVTVDEEE-GPVTSVCWAPDGRHLAVGLTNSHVQLWDT 191
V S + D ++ WN + +FVT GPV + W+ D R L G +S +++WD
Sbjct: 170 VASASFDKSVKLWNGTTG---KFVTAFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDI 340
Query: 192 AANKQLRTLKGGHRARVGSLAW--NGHVLTTGGMD 224
K + L GH V S+ W +G + +GG D
Sbjct: 341 RTRKLKQDLP-GHADEVFSVDWSPDGEKVASGGKD 442
Score = 43.5 bits (101), Expect = 2e-04
Identities = 38/124 (30%), Positives = 54/124 (42%), Gaps = 1/124 (0%)
Frame = +2
Query: 289 RFDEHKAAVKALAWCPFQGNLLASGGGGGDCCVKLWNTGMGERMNSVDTG-SQVCALLWS 347
R H+ V + + P G +AS D VKLWN G+ + + V + WS
Sbjct: 110 RMTGHQQLVNHVYFSP-DGQWVASASF--DKSVKLWNGTTGKFVTAFRGHVGPVYQISWS 280
Query: 348 KNERELLSSHGLTQNQLTLWKYPSMLKIAELHGHTSRVLHMTQSPDGSTVASAAAAADQT 407
+ R LLS G + L +W + +L GH V + SPDG VAS D+
Sbjct: 281 ADSRLLLS--GSKDSTLKVWDIRTRKLKQDLPGHADEVFSVDWSPDGEKVAS--GGKDKV 448
Query: 408 LRFW 411
L+ W
Sbjct: 449 LKLW 460
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 130 SRNVLSIALDHTIYFWNASDSSGSEFVTVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLW 189
SR +LS + D T+ W+ + + +E V SV W+PDG +A G + ++LW
Sbjct: 287 SRLLLSGSKDSTLKVWDIRTRKLKQDLPGHADE--VFSVDWSPDGEKVASGGKDKVLKLW 460
Query: 190 DTAAN 194
AN
Sbjct: 461 MG*AN 475
>TC228105 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {Arabidopsis
thaliana;} , complete
Length = 1113
Score = 59.3 bits (142), Expect = 3e-09
Identities = 45/152 (29%), Positives = 73/152 (47%), Gaps = 3/152 (1%)
Frame = +3
Query: 165 VTSVCWAPDGRHLAVGLTNSHVQLWDTAANKQLRTLKGGHRARVGSLAWNGH---VLTTG 221
V SV W+PDG+ LA G + + ++D K L L+ GH V SL ++ + +L T
Sbjct: 477 VLSVAWSPDGKRLACGSMDGTISVFDVPRAKFLHHLE-GHFMPVRSLVYSPYDPRLLFTA 653
Query: 222 GMDGKIVNNDVRLRSQIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSN 281
DG + D ++ +I T GH V + S DG +A+G +D V +WD++ +S
Sbjct: 654 SDDGNVHMYDAEGKA-LIGTMSGHASWVLCVDVSPDGAAIATGSSDRSVRLWDLNMRAS- 827
Query: 282 SPTRWLYRFDEHKAAVKALAWCPFQGNLLASG 313
+ H V +A+ P G+ + G
Sbjct: 828 -----VQTMSNHSDQVWGVAFRPPGGSDVRGG 908
Score = 50.1 bits (118), Expect = 2e-06
Identities = 60/299 (20%), Positives = 111/299 (37%), Gaps = 18/299 (6%)
Frame = +3
Query: 133 VLSIALDHTIYFWNASDSSGSEFVTVDEEEGP----VTSVCWAPDGRHLAVGLTNSHVQL 188
+L+ +LD T+ W + D + +D V SV P G A +S V++
Sbjct: 93 LLTGSLDETVRLWRSDD------LVLDRTNTGHCLGVASVAAHPLGSVAASSSLDSFVRV 254
Query: 189 WDTAANKQLRTL--------------KGGHRARVGSLAWNGHVLTTGGMDGKIVNNDVRL 234
+D +N + TL KG A G + + + T + + R
Sbjct: 255 FDVDSNATIATLEAPPSEVWQMRFDPKGAILAVAGGGSASVKLWDTSSWELVATLSIPRP 434
Query: 235 RSQIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHK 294
Q G ++ V + WS DGK+LA G D + ++D+ ++L+ + H
Sbjct: 435 EGQKPTDKSGSKKFVLSVAWSPDGKRLACGSMDGTISVFDVPRA------KFLHHLEGHF 596
Query: 295 AAVKALAWCPFQGNLLASGGGGGDCCVKLWNTGMGERMNSVDTGSQVCALLWSKNERELL 354
V++L + P+ LL + G+
Sbjct: 597 MPVRSLVYSPYDPRLLFTASDDGN------------------------------------ 668
Query: 355 SSHGLTQNQLTLWKYPSMLKIAELHGHTSRVLHMTQSPDGSTVASAAAAADQTLRFWEV 413
+ ++ I + GH S VL + SPDG+ +A+ ++D+++R W++
Sbjct: 669 ---------VHMYDAEGKALIGTMSGHASWVLCVDVSPDGAAIAT--GSSDRSVRLWDL 812
>TC207353 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat protein 5,
partial (58%)
Length = 898
Score = 57.8 bits (138), Expect = 1e-08
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 4/198 (2%)
Frame = +3
Query: 218 LTTGGMDGKIVNNDVRLRSQIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSA 277
+ +G D I DV+ + ++T +GH V + ++ DG + S +D IWD
Sbjct: 39 IVSGSFDETIKVWDVKT-GKCVHTIKGHTMPVTSVHYNRDGTLIISASHDGSCKIWDTGT 215
Query: 278 VSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLLASGGGGGDCCVKLWNTGMGERMN---- 333
+ L E KA + A G + + +KLWN G G+ +
Sbjct: 216 GNL------LKTLIEDKAPAVSFAKFSPNGKFILAATLNDT--LKLWNYGSGKFLKIYSG 371
Query: 334 SVDTGSQVCALLWSKNERELLSSHGLTQNQLTLWKYPSMLKIAELHGHTSRVLHMTQSPD 393
V+ + + N R ++S G + +W + I +L GHT V+ +T P
Sbjct: 372 HVNRVYCITSTFSVTNGRYIVS--GSEDRCVYIWDLQAKNMIQKLEGHTDTVISVTCHPT 545
Query: 394 GSTVASAAAAADQTLRFW 411
+ +ASA A D+T+R W
Sbjct: 546 ENKIASAGLAGDRTVRVW 599
Score = 55.1 bits (131), Expect = 6e-08
Identities = 50/204 (24%), Positives = 86/204 (41%), Gaps = 9/204 (4%)
Frame = +3
Query: 130 SRNVLSIALDHTIYFWNASDSSGSEFVTVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLW 189
S ++S + D TI W+ +G T+ PVTSV + DG + + ++W
Sbjct: 30 SSYIVSGSFDETIKVWDVK--TGKCVHTIKGHTMPVTSVHYNRDGTLIISASHDGSCKIW 203
Query: 190 DTAANKQLRTLKGGHRARV--GSLAWNGHVLTTGGMDGKIVNNDVRL----RSQIINTYR 243
DT L+TL V + NG + +N+ ++L + + Y
Sbjct: 204 DTGTGNLLKTLIEDKAPAVSFAKFSPNGKFILAA-----TLNDTLKLWNYGSGKFLKIYS 368
Query: 244 GHRREVCGLKWSL---DGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKAL 300
GH V + + +G+ + SG D V+IWD+ A + + + H V ++
Sbjct: 369 GHVNRVYCITSTFSVTNGRYIVSGSEDRCVYIWDLQA------KNMIQKLEGHTDTVISV 530
Query: 301 AWCPFQGNLLASGGGGGDCCVKLW 324
P + N +AS G GD V++W
Sbjct: 531 TCHPTE-NKIASAGLAGDRTVRVW 599
>TC207267 similar to UP|Q8GTM1 (Q8GTM1) WD40, partial (53%)
Length = 1254
Score = 57.4 bits (137), Expect = 1e-08
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 9/225 (4%)
Frame = +2
Query: 167 SVCWAP--DGRHLAVGLTNSHVQLWDTAANKQLRTLKG---GHRARVGSLAWN---GHVL 218
++ W+P G+ LA G N+ + LW+ + GH A V L W+ HV
Sbjct: 227 AIDWSPLVPGK-LASGDCNNCIYLWEPTSAGTWNVDNAPFIGHTASVEDLQWSPTESHVF 403
Query: 219 TTGGMDGKIVNNDVRLRSQIINTYRGHRREVCGLKWS-LDGKQLASGGNDNVVHIWDMSA 277
+ +DG I D RL +++ H +V + W+ L LASG +D + I D+
Sbjct: 404 ASCSVDGNIAIWDTRLGKSPAASFKAHNADVNVMSWNRLASCMLASGSDDGTISIRDLRL 583
Query: 278 VSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLLASGGGGGDCCVKLWNTGMGERMNSVDT 337
+ + F+ HK + ++ W P + + LA D + +W+ S++
Sbjct: 584 LKEGDSV--VAHFEYHKHPITSIEWSPHEASSLAV--SSSDNQLTIWDL-------SLEK 730
Query: 338 GSQVCALLWSKNERELLSSHGLTQNQLTLWKYPSMLKIAELHGHT 382
+ A +K + ++ + L L + + LK ELH HT
Sbjct: 731 DEEEEAEFKAKTKEQVNAPEDLPPQLLFIHQGQKDLK--ELHWHT 859
>TC229097 similar to PIR|T46032|T46032 WD-40 repeat regulatory protein tup1
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (47%)
Length = 755
Score = 55.5 bits (132), Expect = 5e-08
Identities = 44/192 (22%), Positives = 86/192 (43%)
Frame = +1
Query: 133 VLSIALDHTIYFWNASDSSGSEFVTVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTA 192
++S + D W+AS + + +D+E PV+ V ++P+ + + VG ++ ++LW+ +
Sbjct: 43 IVSSSYDGLCRIWDASTGHCMKTL-IDDENPPVSFVKFSPNAKFILVGTLDNTLRLWNYS 219
Query: 193 ANKQLRTLKGGHRARVGSLAWNGHVLTTGGMDGKIVNNDVRLRSQIINTYRGHRREVCGL 252
K L+T + GH VN+ + S T
Sbjct: 220 TGKFLKT-------------YTGH-----------VNSKYCISSTFSIT----------- 294
Query: 253 KWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLLAS 312
+GK + G DN +++WD+ + + + + + H AV +++ P + N++AS
Sbjct: 295 ----NGKYIVGGSEDNCIYLWDLQS------RKIVQKLEGHSDAVVSVSCHPTE-NMIAS 441
Query: 313 GGGGGDCCVKLW 324
G G D VK+W
Sbjct: 442 GALGNDNTVKIW 477
Score = 44.7 bits (104), Expect = 8e-05
Identities = 37/165 (22%), Positives = 63/165 (37%), Gaps = 2/165 (1%)
Frame = +1
Query: 249 VCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCPFQGN 308
V + ++ DG + S D + IWD S D+ V + + P
Sbjct: 7 VTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTL-----IDDENPPVSFVKFSPNAKF 171
Query: 309 LLASGGGGGDCCVKLWNTGMGERMNSVD--TGSQVCALLWSKNERELLSSHGLTQNQLTL 366
+L G D ++LWN G+ + + S+ C G N + L
Sbjct: 172 ILV---GTLDNTLRLWNYSTGKFLKTYTGHVNSKYCISSTFSITNGKYIVGGSEDNCIYL 342
Query: 367 WKYPSMLKIAELHGHTSRVLHMTQSPDGSTVASAAAAADQTLRFW 411
W S + +L GH+ V+ ++ P + +AS A D T++ W
Sbjct: 343 WDLQSRKIVQKLEGHSDAVVSVSCHPTENMIASGALGNDNTVKIW 477
>TC204561 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1419
Score = 55.1 bits (131), Expect = 6e-08
Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 26/307 (8%)
Frame = +1
Query: 133 VLSIALDHTIYFWNASDSSGSEFVTVDEEEGP---VTSVCWAPDGRHLAVGLTNSHVQLW 189
+++ + D +I W+ + + V G V V + DG+ G + ++LW
Sbjct: 235 IVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 414
Query: 190 DTAANKQLRTLKGGHRARVGSLAW--NGHVLTTGGMDGKI-VNNDVRLRSQIINTYRGHR 246
D AA R GH V S+A+ + + + D I + N + I H
Sbjct: 415 DLAAGTSARRFV-GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQDGDAHS 591
Query: 247 REVCGLKWSLDGKQ--LASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCP 304
V +++S Q + S D V +W+++ + H V +A P
Sbjct: 592 DWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTNCKLRN------TLAGHNGYVNTVAVSP 753
Query: 305 FQGNLLASGGGGGDCCVKLWNTGMGERMNSVDTGSQVCALLWSKNERELLSSHGLTQNQL 364
G+L ASGG G + LW+ G+R+ S+D GS + AL +S N L ++ T+ +
Sbjct: 754 -DGSLCASGGKDG--VILLWDLAEGKRLYSLDAGSIIHALCFSPNRYWLCAA---TEQSI 915
Query: 365 TLWKYPSMLKIAEL---------------HGHTSRVLHMTQ---SPDGSTVASAAAAADQ 406
+W S + +L + + +V++ T S DGST+ S D
Sbjct: 916 KIWDLESKSIVEDLKVDLKTEADATSGGGNANKKKVIYCTSLNWSADGSTLFS--GYTDG 1089
Query: 407 TLRFWEV 413
+R W +
Sbjct: 1090VVRVWAI 1110
>TC207354 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat protein 5,
partial (57%)
Length = 1124
Score = 53.1 bits (126), Expect = 2e-07
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 2/198 (1%)
Frame = +1
Query: 135 SIALDHTIYFWNASDSSGSEFVTVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTAAN 194
S +LD T+ W+++ + + V EG ++ + W+ D ++ + +++WD
Sbjct: 187 SASLDKTLIIWSSATLTLCHRL-VGHSEG-ISDLAWSSDSHYICSASDDRTLRIWDATVG 360
Query: 195 KQLRTLKGGHRARVGSLAWN--GHVLTTGGMDGKIVNNDVRLRSQIINTYRGHRREVCGL 252
+ GH V + +N + +G D I DV+ + ++T +GH V +
Sbjct: 361 GGCIKILRGHDDAVFCVNFNPQSSYIVSGSFDETIKVWDVKT-GKCVHTIKGHTMPVTSV 537
Query: 253 KWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLLAS 312
++ DG + S +D IWD L E KA + A G L+ +
Sbjct: 538 HYNRDGNLIISASHDGSCKIWD------TETGNLLKTLIEDKAPAVSFAKFSPNGKLILA 699
Query: 313 GGGGGDCCVKLWNTGMGE 330
+KLWN G GE
Sbjct: 700 ATLND--TLKLWNYGSGE 747
Score = 43.9 bits (102), Expect = 1e-04
Identities = 36/174 (20%), Positives = 68/174 (38%)
Frame = +1
Query: 239 INTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVK 298
+ T H V +K+S DG LAS D + IW S++ +R H +
Sbjct: 115 LKTLTDHENAVSCVKFSNDGTLLASASLDKTLIIW------SSATLTLCHRLVGHSEGIS 276
Query: 299 ALAWCPFQGNLLASGGGGGDCCVKLWNTGMGERMNSVDTGSQVCALLWSKNERELLSSHG 358
LAW + ++ D +++W+ +G + G + N + G
Sbjct: 277 DLAWSSDSHYICSA---SDDRTLRIWDATVGGGCIKILRGHDDAVFCVNFNPQSSYIVSG 447
Query: 359 LTQNQLTLWKYPSMLKIAELHGHTSRVLHMTQSPDGSTVASAAAAADQTLRFWE 412
+ +W + + + GHT V + + DG+ + S A+ D + + W+
Sbjct: 448 SFDETIKVWDVKTGKCVHTIKGHTMPVTSVHYNRDGNLIIS--ASHDGSCKIWD 603
Score = 37.7 bits (86), Expect = 0.010
Identities = 29/108 (26%), Positives = 51/108 (46%)
Frame = +2
Query: 304 PFQGNLLASGGGGGDCCVKLWNTGMGERMNSVDTGSQVCALLWSKNERELLSSHGLTQNQ 363
P LL+ G G C+K+++ G R+ + + V N + ++ G +
Sbjct: 701 PLSTTLLSYGTMGVGKCLKIYS-GHVNRVYCITSTFSVT------NGKYIVG--GSEDHC 853
Query: 364 LTLWKYPSMLKIAELHGHTSRVLHMTQSPDGSTVASAAAAADQTLRFW 411
+ +W L + +L GHT V+ +T P + +ASA A D+T+R W
Sbjct: 854 VYIWDLQQKL-VQKLEGHTDTVISVTCHPTENKIASAGLAGDRTVRVW 994
Score = 35.4 bits (80), Expect = 0.051
Identities = 38/167 (22%), Positives = 62/167 (36%), Gaps = 39/167 (23%)
Frame = +1
Query: 244 GHRREVCGLKWSLDGKQLASGGNDNVVHIWDMS-----------------AVSSNSPTRW 286
GH + L WS D + S +D + IWD + V+ N + +
Sbjct: 256 GHSEGISDLAWSSDSHYICSASDDRTLRIWDATVGGGCIKILRGHDDAVFCVNFNPQSSY 435
Query: 287 LY--RFDE------------------HKAAVKALAWCPFQGNLLASGGGGGDCCVKLWNT 326
+ FDE H V ++ + GNL+ S G C K+W+T
Sbjct: 436 IVSGSFDETIKVWDVKTGKCVHTIKGHTMPVTSVHY-NRDGNLIISASHDGSC--KIWDT 606
Query: 327 GMGERMNSV--DTGSQVCALLWSKNERELLSSHGLTQNQLTLWKYPS 371
G + ++ D V +S N + +L++ + L LW Y S
Sbjct: 607 ETGNLLKTLIEDKAPAVSFAKFSPNGKLILAA--TLNDTLKLWNYGS 741
>TC205059 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1492
Score = 51.6 bits (122), Expect = 7e-07
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 8/254 (3%)
Frame = +2
Query: 133 VLSIALDHTIYFWNASDSSGSEFVTVDEEEGP---VTSVCWAPDGRHLAVGLTNSHVQLW 189
+++ + D +I W+ + + V G V V + DG+ G + ++LW
Sbjct: 311 IVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 490
Query: 190 DTAANKQLRTLKGGHRARVGSLAW--NGHVLTTGGMDGKI-VNNDVRLRSQIINTYRGHR 246
D AA R GH V S+A+ + + + D I + N + I H
Sbjct: 491 DLAAGTSARRFV-GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQDGDAHS 667
Query: 247 REVCGLKWSLDGKQ--LASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCP 304
V +++S Q + S D V +W+++ + H V +A P
Sbjct: 668 DWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTNCKLRN------TLAGHNGYVNTVAVSP 829
Query: 305 FQGNLLASGGGGGDCCVKLWNTGMGERMNSVDTGSQVCALLWSKNERELLSSHGLTQNQL 364
G+L ASGG G + LW+ G+R+ S+D GS + AL +S N L ++ T+ +
Sbjct: 830 -DGSLCASGGKDG--VILLWDLAEGKRLYSLDAGSIIHALCFSPNRYWLCAA---TEQSI 991
Query: 365 TLWKYPSMLKIAEL 378
+W S + +L
Sbjct: 992 KIWDLESKSIVEDL 1033
Score = 43.5 bits (101), Expect = 2e-04
Identities = 55/233 (23%), Positives = 91/233 (38%), Gaps = 11/233 (4%)
Frame = +2
Query: 192 AANKQLRTLKGGHRARVGSLAW---NGHVLTTGGMDGKIVNNDVRLRSQIINTYR----G 244
A N LR H V ++A N ++ T D I+ + + R G
Sbjct: 224 ADNLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTG 403
Query: 245 HRREVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCP 304
H V + S DG+ SG D + +WD++A +S RF H V ++A+
Sbjct: 404 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTS------ARRFVGHTKDVLSVAFSI 565
Query: 305 FQGNLLASGGGGGDCCVKLWNTGMGERMNSVDTGSQ----VCALLWSKNERELLSSHGLT 360
++++ D +KLWNT +GE ++ G V + +S + +
Sbjct: 566 DNRQIVSA---SRDRTIKLWNT-LGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASW 733
Query: 361 QNQLTLWKYPSMLKIAELHGHTSRVLHMTQSPDGSTVASAAAAADQTLRFWEV 413
+ +W + L GH V + SPDGS AS D + W++
Sbjct: 734 DRTVKVWNLTNCKLRNTLAGHNGYVNTVAVSPDGSLCAS--GGKDGVILLWDL 886
Score = 29.6 bits (65), Expect = 2.8
Identities = 12/22 (54%), Positives = 13/22 (58%)
Frame = +3
Query: 252 LKWSLDGKQLASGGNDNVVHIW 273
L WS DG L SG D VV +W
Sbjct: 1116 LNWSSDGSTLFSGYTDGVVRVW 1181
>TC208434 similar to PIR|T01391|T01391 WD-repeat protein T4I9.10 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(68%)
Length = 1364
Score = 51.6 bits (122), Expect = 7e-07
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Frame = +1
Query: 123 LNLLDWGSRNVLSIALDHTIYFW-NASDSSGSEFVTVDEEEGPVTSVCWAPDGRHLAVGL 181
++++ GS SIA I++ N S +G D+E G + SV ++ DGR L G
Sbjct: 301 IHIVTVGSGTTESIANVTEIHYGLNFSSDNG------DDEFG-IFSVKFSTDGRELVAGT 459
Query: 182 TNSHVQLWDTAANKQLRTLKGGHRARVGSLAW---NGHVLTTGGMDGKIVNNDVRL---R 235
++ + ++D A+K L H++ V ++ + +GH++ +G D I D R +
Sbjct: 460 SDCSICVYDLGADK-LSLRIPAHQSDVNTVCFADESGHLIYSGSDDSFIKVWDRRCFVAK 636
Query: 236 SQIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNS------PTRWLYR 289
Q GH + + DG+ L S G D +WD+ +SSN+ W YR
Sbjct: 637 GQPAGILMGHLEGITFIDSRGDGRYLISNGKDQTTKLWDIRKMSSNAINLGLGDDEWDYR 816
Query: 290 FDEH 293
+ ++
Sbjct: 817 WMDY 828
Score = 36.6 bits (83), Expect = 0.023
Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 44/203 (21%)
Frame = +1
Query: 158 VDEEEGPVTSVCWAPDGRHLAV-GLTNSHVQLWDT---AANKQLRTLKGGHRARVGSL-- 211
+ + V +VC+A + HL G +S +++WD A Q + GH + +
Sbjct: 514 IPAHQSDVNTVCFADESGHLIYSGSDDSFIKVWDRRCFVAKGQPAGILMGHLEGITFIDS 693
Query: 212 AWNGHVLTTGGMDG--------KIVNNDVRL------------------------RSQII 239
+G L + G D K+ +N + L Q +
Sbjct: 694 RGDGRYLISNGKDQTTKLWDIRKMSSNAINLGLGDDEWDYRWMDYPEYARNLKHPHDQSL 873
Query: 240 NTYRGHR------REVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEH 293
TY+GH R +S K + +G +D+ V+I+D+ + + + + D H
Sbjct: 874 ATYKGHSVLRTLVRCYFSPSYSTGQKYIYTGSSDSSVYIYDLVSGAQ------VAKLDHH 1035
Query: 294 KAAVKALAWCPFQGNLLASGGGG 316
+A V+ +W P+ ++ S G
Sbjct: 1036EAPVRDCSWHPYYPMMITSAWDG 1104
>TC205974 homologue to UP|Q94KS2 (Q94KS2) TGF-beta receptor-interacting
protein 1, partial (57%)
Length = 783
Score = 51.2 bits (121), Expect = 9e-07
Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 18/168 (10%)
Frame = +3
Query: 123 LNLLDWGSRN--VLSIALDHTIYFWNASDSSGSEFVTVDEEEG---PVTSVCWAPDGRHL 177
+N WG N ++S D I W++ +G D+E G VTS+ + DG H
Sbjct: 33 INRAIWGPLNTTIISAGEDAVIRIWDSE--TGKLLKESDKESGHKKTVTSLAKSADGSHF 206
Query: 178 AVGLTNSHVQLWDTAANKQLRTLKGGHRARVGSLA-WNGHVLTTGGMDGKIVNND----- 231
G + +LWDT + ++T +++ HV+ GG D V
Sbjct: 207 LTGSLDKSARLWDTRSLTLIKTYVTERPVNAVTMSPLLDHVVIGGGQDASAVTTTDHRAG 386
Query: 232 -------VRLRSQIINTYRGHRREVCGLKWSLDGKQLASGGNDNVVHI 272
++ + I +GH + L ++ DGK +SGG D V +
Sbjct: 387 KFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRL 530
Score = 29.3 bits (64), Expect = 3.6
Identities = 17/71 (23%), Positives = 30/71 (41%)
Frame = +3
Query: 244 GHRREVCGLKWSLDGKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWC 303
GH++ V L S DG +G D +WD +++ L + + V A+
Sbjct: 153 GHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRSLT-------LIKTYVTERPVNAVTMS 311
Query: 304 PFQGNLLASGG 314
P +++ GG
Sbjct: 312 PLLDHVVIGGG 344
>TC220562 similar to UP|Q9LV35 (Q9LV35) WD40-repeat protein, partial (29%)
Length = 867
Score = 50.4 bits (119), Expect = 2e-06
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +2
Query: 139 DHTIYFWNASDSSGSEFVTVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTAANKQLR 198
D ++ ++ S + +E +++ G +T + ++PD A N +WD A+ +
Sbjct: 188 DGKLHMYSVSGDTVTEQAVLEKHRGAITVIRYSPDFSMFASADLNREAVVWDRASKEVKL 367
Query: 199 TLKGGHRARVGSLAW--NGHVLTTGGMDGKIVNNDVRLRSQIINTYRG-HRREVCGLKWS 255
+ AR+ LAW + ++ TG +D ++ +V + T +G H V GL +
Sbjct: 368 NNMLFNTARINCLAWSPDSTLVATGSLDTCVIIYEVGKPASSRRTIKGAHIGGVYGLVF- 544
Query: 256 LDGKQLASGGNDNVVHIWDM 275
+D +++ S G D V +W++
Sbjct: 545 IDQERVVSSGEDGCVRVWNL 604
>TC209542
Length = 1445
Score = 50.1 bits (118), Expect = 2e-06
Identities = 59/266 (22%), Positives = 111/266 (41%), Gaps = 1/266 (0%)
Frame = +2
Query: 149 DSSGSEFVTVDEEEGPVTSVCWAPDGRHLAVGLTNSHVQLWDTAANKQLRTLKGGHR-AR 207
D G E + EG V + + DG ++ + ++LW+ ++T K R R
Sbjct: 5 DLPGKEVNVLKGHEGGVLAARFNGDGNYVLSCGKDRTIRLWNPHRGIHIKTYKSHAREVR 184
Query: 208 VGSLAWNGHVLTTGGMDGKIVNNDVRLRSQIINTYRGHRREVCGLKWSLDGKQLASGGND 267
+ + L + G D +I DV ++I +RGH EV G+K++ + + S G D
Sbjct: 185 DVHVTQDNSKLCSCGGDRQIFYWDVAT-GRVIRKFRGHDGEVNGVKFNENSSGVVSAGYD 361
Query: 268 NVVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLLASGGGGGDCCVKLWNTG 327
+ WD + S P + + F A ++ C + ++ GG D V+ ++
Sbjct: 362 QSLRAWDCRS-HSTEPIQIIDTF-----ADSVMSVCLTKTEII---GGSVDGTVRTFDIR 514
Query: 328 MGERMNSVDTGSQVCALLWSKNERELLSSHGLTQNQLTLWKYPSMLKIAELHGHTSRVLH 387
+G R S + G V + S + +L+ G + L L + + E GHT++
Sbjct: 515 IG-RETSDNLGQPVNCVSMSNDGNCILA--GCLDSTLRLLDRSTGELLQEYKGHTNKSYK 685
Query: 388 MTQSPDGSTVASAAAAADQTLRFWEV 413
+ + + D + FW++
Sbjct: 686 LDCCLTNTDAHVTGVSEDGFIYFWDL 763
>TC208554 UP|Q9FUF3 (Q9FUF3) FAS2, complete
Length = 1945
Score = 49.3 bits (116), Expect = 3e-06
Identities = 46/216 (21%), Positives = 89/216 (40%), Gaps = 15/216 (6%)
Frame = +1
Query: 164 PVTSVCWAPDGRHLAVGLTNSHVQLWD---TAANKQLRTLK-----GGHRARVGSLAWN- 214
PV ++ + P LA + ++ W + K+L + H + V + ++
Sbjct: 43 PVLTLDFHPHSATLATAGADFDIKFWQIKPAGSPKKLPVVSYLSNLSYHSSAVNVIRFSS 222
Query: 215 -GHVLTTGGMDGKIV-----NNDVRLRSQIINTYRGHRREVCGLKWSLDGKQLASGGNDN 268
G L +G G ++ + D +++ R H +++ L+WS D + SG DN
Sbjct: 223 SGEXLASGADGGDLIIWKLHSTDAGQTWKVLKMLRSHHKDILDLQWSTDATYIISGSVDN 402
Query: 269 VVHIWDMSAVSSNSPTRWLYRFDEHKAAVKALAWCPFQGNLLASGGGGGDCCVKLWNTGM 328
IWD++ ++ L D H V+ +AW P G + S C + +
Sbjct: 403 CCIIWDVNKGTN------LQTLDTHAHYVQGVAWDPL-GKYVTSLSSDRTCRIYM---NK 552
Query: 329 GERMNSVDTGSQVCALLWSKNERELLSSHGLTQNQL 364
+ ++ + VC + SK ++ LL + T+ L
Sbjct: 553 PHKSKGIEKINYVCQQVISKADQPLLKNSKETKFHL 660
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.133 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,957,151
Number of Sequences: 63676
Number of extensions: 390778
Number of successful extensions: 4633
Number of sequences better than 10.0: 172
Number of HSP's better than 10.0 without gapping: 3659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4434
length of query: 436
length of database: 12,639,632
effective HSP length: 100
effective length of query: 336
effective length of database: 6,272,032
effective search space: 2107402752
effective search space used: 2107402752
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146343.9