TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146341.1 - phase: 0 /pseudo
         (1544 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC232413 weakly similar to UP|Q93X15 (Q93X15) Amino acid permeas...    33  1.3
CO979705                                                               32  2.2
TC217019 weakly similar to UP|Q94A32 (Q94A32) AT3g43520/T18D12_9...    31  4.8
TC232893 similar to UP|Q712D7 (Q712D7) Inositol polyphosphate 5-...    30  6.3
BE331671 similar to PIR|T11855|T11 DnaJ protein homolog - kidney...    30  6.3
TC228454 similar to UP|Q9M7Y4 (Q9M7Y4) F3E22.8 protein, partial ...    30  8.2
TC226897 weakly similar to UP|Q9ASX9 (Q9ASX9) F1N18.24/F1N18.24,...    30  8.2

>TC232413 weakly similar to UP|Q93X15 (Q93X15) Amino acid permease AAP1,
           partial (27%)
          Length = 802

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 16/69 (23%), Positives = 31/69 (44%)
 Frame = +2

Query: 403 CDGTVSESWIVKVSPCLRLSLKWFGTVKTSLIHSVFFLCEWATCDFRDFCTTPPCDIKFT 462
           C    ++ +  K  P +   + W+  +K  L HS+   C W +C +R      P +I+  
Sbjct: 206 CFSPSADEYQTKEDPKVEW*MDWYANLKCCLFHSISCGCCWLSCQYR----A*PTEIQTV 373

Query: 463 GRKDLSQVH 471
             + L+ +H
Sbjct: 374 SCRLLNSIH 400


>CO979705 
          Length = 709

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
 Frame = +3

Query: 1459 CFRDCQGLYD-----LMVADGSDAEFAALLELNGSDMHLKSMAFVPLRSRLFLDAMIDCK 1513
            C  +C+G  +     + V +G+DAE  A+LE  G  + ++  AF+ L       + +D  
Sbjct: 456  CLGNCRGFGE*VRSNVTVGNGADAEIVAMLEEQGRSVPVRKFAFIML-------SALDID 614

Query: 1514 MPPSIFTKDDV 1524
               SI   +DV
Sbjct: 615  PESSILAAEDV 647


>TC217019 weakly similar to UP|Q94A32 (Q94A32) AT3g43520/T18D12_90, partial
           (48%)
          Length = 929

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 24/69 (34%), Positives = 32/69 (45%), Gaps = 3/69 (4%)
 Frame = -3

Query: 537 DQHVVHKGEGLK-RLHLFIVELIRAG--IFYPLAYVRQLIVSGIMNMDVNVVDVERRKRH 593
           DQH  H   G K +LH     L  A   I+YP  ++R L+ +   +M V     E  K H
Sbjct: 816 DQHKHHGSTGQKHKLHNSRRRLHSAKFTIYYPTIHLRYLVRTTHNSMQVTTSHYEGHK*H 637

Query: 594 SHILKQLPG 602
           +   K LPG
Sbjct: 636 NTCWKDLPG 610


>TC232893 similar to UP|Q712D7 (Q712D7) Inositol polyphosphate 5-phosphatase,
           partial (15%)
          Length = 537

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = -1

Query: 457 CDIKFTGRKDLSQVHIAVRLLKMKLRDVKSSLRRAKRSIHRASYAAKHESQRHNQNYITT 516
           C IK  GR    + HI++ ++K+ +  +       + +IH+A+Y   H   + + + IT 
Sbjct: 219 CSIK*VGRS--GEHHISINVIKISIPPINCFQVCGQVTIHKANYPVIHSDSQTHSSLITN 46

Query: 517 GSS 519
            +S
Sbjct: 45  CTS 37


>BE331671 similar to PIR|T11855|T11 DnaJ protein homolog - kidney bean
           (fragment), partial (76%)
          Length = 454

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 10/43 (23%)
 Frame = -3

Query: 736 GKTEPVEGTP----------GCEECRRAKRQKLSEERSSSVPA 768
           G+  PV GTP          GC E RRAK ++ S+++ S+ P+
Sbjct: 257 GRV*PVAGTPH*FIG*RCRRGCREPRRAKSKRSSDKKVSAAPS 129


>TC228454 similar to UP|Q9M7Y4 (Q9M7Y4) F3E22.8 protein, partial (22%)
          Length = 813

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 2/160 (1%)
 Frame = +3

Query: 1259 PSKASRAQFQMSSAEVHDTSATNSNELGNNSIKTVVTKATKIAAAVSA--LVVGAVIYGV 1316
            PS+  R+    +  +   +S  N+    +  + T  T  T+ +++V+A  +++   +  V
Sbjct: 201  PSRRRRSSLLPTG*DAERSSGENNEPNADYQVTTPGTPGTRGSSSVTAETVLLEVEVTSV 380

Query: 1317 TSLERMVTILRLKEGLDVIQCIRTTRSNSNGNVRSVGAFKADSSIEVHVHWFRLLIGNCR 1376
             +   +V  + +  G++ I   R  R  +   +RS+   +                  CR
Sbjct: 381  AAASVVVVGISIDLGVETIGMNRHLRFRT---LRSISCIRC-----------------CR 500

Query: 1377 SLCEGLAVDLLGEPSISALSRMQRMLPLSLIFPPAYSIFA 1416
             LC  +A           L R +  +P+   FPP +  FA
Sbjct: 501  GLCSRIACIFRSRGLFELLQRGRLWIPIGKRFPPDWFQFA 620


>TC226897 weakly similar to UP|Q9ASX9 (Q9ASX9) F1N18.24/F1N18.24, partial
           (21%)
          Length = 1385

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = -1

Query: 315 PLPSSVVSHTMNDGSFVLKSSEAAGKIKNSSDYFGRIVLCIQKRAEDLAKAASP--GNPS 372
           P P    +   +D  F L   +   ++ +   YF R++  +   +   + +++P   N S
Sbjct: 959 PAPEDFCTEDDDDDLFFLDFEQ*LEQVSDKLSYFSRVLAVLTSSSSKSSSSSAPMLNNAS 780

Query: 373 HCLAKVAKALDNSL 386
             L   +KA DNSL
Sbjct: 779 MSLGSSSKADDNSL 738


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.319    0.134    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,633,334
Number of Sequences: 63676
Number of extensions: 929882
Number of successful extensions: 4744
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4741
length of query: 1544
length of database: 12,639,632
effective HSP length: 110
effective length of query: 1434
effective length of database: 5,635,272
effective search space: 8080980048
effective search space used: 8080980048
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)