BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146331.10 + phase: 0
(485 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC222300 similar to GB|AAP37786.1|30725528|BT008427 At1g51560 {A... 449 e-126
TC218418 homologue to UP|Q6X4V5 (Q6X4V5) ABC transporter, partia... 319 2e-87
TC229551 weakly similar to UP|Q6X4V5 (Q6X4V5) ABC transporter, p... 305 2e-83
TC208367 similar to GB|AAP37786.1|30725528|BT008427 At1g51560 {A... 248 4e-66
TC207843 similar to GB|AAP37786.1|30725528|BT008427 At1g51560 {A... 187 9e-48
TC218388 similar to UP|Q9LMU4 (Q9LMU4) F2H15.7 protein, partial ... 181 5e-46
TC209054 similar to UP|Q6K376 (Q6K376) ABC transporter-like prot... 145 5e-35
BE806563 similar to GP|11994752|db ABC transporter-like protein ... 123 2e-28
TC218748 similar to UP|Q76CU1 (Q76CU1) PDR-type ABC transporter ... 113 2e-25
BI892553 106 3e-23
TC218050 weakly similar to UP|Q7PC82 (Q7PC82) PDR14 ABC transpor... 103 2e-22
TC222160 101 9e-22
TC208020 similar to UP|Q76CU2 (Q76CU2) PDR-type ABC transporter ... 93 2e-19
CA820193 similar to PIR|T04229|T04 ABC-type transport protein F1... 92 7e-19
BI699796 similar to PIR|G85167|G85 ABC transporter like protein ... 87 2e-17
AW755657 78 1e-14
TC212091 similar to UP|Q9LFG8 (Q9LFG8) ABC transporter-like prot... 74 1e-13
BG882711 73 3e-13
BQ080393 70 2e-12
TC209607 66 3e-11
>TC222300 similar to GB|AAP37786.1|30725528|BT008427 At1g51560 {Arabidopsis
thaliana;} , partial (37%)
Length = 801
Score = 449 bits (1154), Expect = e-126
Identities = 221/267 (82%), Positives = 239/267 (88%)
Frame = +1
Query: 57 SIIDGTIIEMGLQDCADRLIGNWHLRGISGGERKRTSIALEILTKPRLLFLDEPTCGLDS 116
SI D TIIEMGLQDC DRLIG WHLRGISGGE+KR SIAL ILT+PRLLFLDEPT GLDS
Sbjct: 1 SITDATIIEMGLQDCDDRLIGKWHLRGISGGEKKRLSIAL*ILTRPRLLFLDEPTSGLDS 180
Query: 117 ASAFFVVQTLRNIAHDGRTVISSIHQPNSEVFALFDDLFLLARGETVYFGEAKMAIEFFA 176
ASAFFVVQTLRN+A D RTVI SIHQP+SEVFAL+DDLFLL+ GETVYFGEAK AIEFF
Sbjct: 181 ASAFFVVQTLRNVARDERTVIYSIHQPDSEVFALYDDLFLLSGGETVYFGEAKSAIEFFD 360
Query: 177 EAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNLATAQIKSMLV 236
EAGFPCPRKRNP DHFLRCIN DFD+VTAT+KGSQRIHDVPNSADPFMNLATA+IK+ LV
Sbjct: 361 EAGFPCPRKRNPYDHFLRCINYDFDIVTATIKGSQRIHDVPNSADPFMNLATAEIKATLV 540
Query: 237 ERFKRSTYARRVKYNIQEQSTNEGIETETNYGSQASWWKQLSTLTRRSFVNMCRDIGYYW 296
E++KRSTYARR K IQE ST+EG+ T +GSQASWWKQL TLT+RSFVNMCRD+GYYW
Sbjct: 541 EKYKRSTYARRAKNRIQELSTDEGLHPPTQHGSQASWWKQLLTLTKRSFVNMCRDVGYYW 720
Query: 297 LRIIINIIVSICVGTLYFDVGYSYTSI 323
LRII+ IIVSICV T YFDVGYSYTSI
Sbjct: 721 LRIIVYIIVSICV*TDYFDVGYSYTSI 801
>TC218418 homologue to UP|Q6X4V5 (Q6X4V5) ABC transporter, partial (49%)
Length = 1220
Score = 319 bits (818), Expect = 2e-87
Identities = 159/264 (60%), Positives = 199/264 (75%)
Frame = +1
Query: 1 MTGNVLLNGKKKIPDYGFVAYVTQEDVLLGTLTVKETIAYSAHLRLPSTMSKEEVSSIID 60
++G +LLNG+K +G AYVTQ+D L+GTLTV+ETI+YSA LRLP M + ++++
Sbjct: 421 LSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDNMPWADKRALVE 600
Query: 61 GTIIEMGLQDCADRLIGNWHLRGISGGERKRTSIALEILTKPRLLFLDEPTCGLDSASAF 120
TI+ MGLQDCAD +IGNWHLRGISGGE++R SIALEIL +PRLLFLDEPT GLDSASAF
Sbjct: 601 STIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAF 780
Query: 121 FVVQTLRNIAHDGRTVISSIHQPNSEVFALFDDLFLLARGETVYFGEAKMAIEFFAEAGF 180
FV QTLR +A DGRTVI+SIHQP+SEVF LFD L+LL+ G+TVYFG+A A EFFA+AGF
Sbjct: 781 FVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSSGKTVYFGQASEAYEFFAQAGF 960
Query: 181 PCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNLATAQIKSMLVERFK 240
PCP RNPSDHFLRCINSDFD V ATLKGS ++ S DP + TA+ L++ ++
Sbjct: 961 PCPALRNPSDHFLRCINSDFDKVKATLKGSMKLR-FEGSDDPLDRITTAEAIRTLIDFYR 1137
Query: 241 RSTYARRVKYNIQEQSTNEGIETE 264
S ++ + + E S +G E
Sbjct: 1138TSQHSYAARQKVDEISKVKGTVLE 1209
>TC229551 weakly similar to UP|Q6X4V5 (Q6X4V5) ABC transporter, partial (34%)
Length = 1436
Score = 305 bits (782), Expect = 2e-83
Identities = 173/431 (40%), Positives = 259/431 (59%), Gaps = 6/431 (1%)
Frame = +3
Query: 2 TGNVLLNGKKKIPDYGFVAYVTQEDVLLGTLTVKETIAYSAHLRLPSTMSKEEVSSIIDG 61
TG +L+NG K+ YG YVTQ+D +L LT ET+ YSA L+ P+TMS EE D
Sbjct: 201 TGKILINGHKQELAYGTSGYVTQDDAMLSCLTAGETLYYSAMLQFPNTMSVEEKKERADM 380
Query: 62 TIIEMGLQDCADRLIGNWHLRGISGGERKRTSIALEILTKPRLLFLDEPTCGLDSASAFF 121
T+ EMGLQD + +G W+ +G+SGG+R+R SI +EILT P+LLFLDEPT GLDSA++++
Sbjct: 381 TLREMGLQDAINTRVGGWNCKGLSGGQRRRLSICIEILTHPKLLFLDEPTSGLDSAASYY 560
Query: 122 VVQTLRN-IAHDG--RTVISSIHQPNSEVFALFDDLFLLARGETVYFGEAKMAIEFFAEA 178
V+ + N I DG RT+++S+HQP+SEVF LF DLFLL+ GETVYFG A A +FFA
Sbjct: 561 VMSGIANLIQRDGIQRTIVASVHQPSSEVFQLFHDLFLLSSGETVYFGPASDANQFFASN 740
Query: 179 GFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNLATAQIKSMLVER 238
GFPCP NPSDH+LR IN DF + D + T + +LV
Sbjct: 741 GFPCPPLYNPSDHYLRIINKDF------------------NQDADEGITTEEATKILVNS 866
Query: 239 FKRSTYARRVKYNIQEQSTNEGIETETNYGSQASWWKQLSTLTRRSFVNMCRDIGYYWLR 298
+K S ++ V+ I + T+ G A++ Q L RR+ + + RD + R
Sbjct: 867 YKSSEFSNHVQSEIAKSETDFG-ACGKKKKIHAAFITQCLILIRRASLQIYRDTNNHRAR 1043
Query: 299 IIINIIVSICVGTL-YFDVGYSYTSILARGACGAFVTGFMTTIS-IGSLPSVIEEMKVFY 356
+++ I +S+ VG++ Y G SI+ RG+ F +T ++ +G + +IEEM VF
Sbjct: 1044LVVFIFISLSVGSIFYHSGGPDLRSIMDRGSLLCFFLSVVTFMTLVGGISPLIEEMNVFK 1223
Query: 357 RERMNGYYGVAAYILANFISSFPF-LVVIALTSCTITYNMVKFRPGFIHYVFFTLNVYGC 415
RER+NG+YG+ A++++N S+ P+ +++ + +TY + G ++VF ++
Sbjct: 1224RERLNGHYGITAFLISNIFSAVPYNFLMLIIPGAVVTY-LSGLHKGVDNFVFLISVLFAT 1400
Query: 416 LSVIESIMMVV 426
++ +ES+MMVV
Sbjct: 1401VTWVESLMMVV 1433
>TC208367 similar to GB|AAP37786.1|30725528|BT008427 At1g51560 {Arabidopsis
thaliana;} , partial (34%)
Length = 1062
Score = 248 bits (633), Expect = 4e-66
Identities = 110/172 (63%), Positives = 144/172 (82%)
Frame = +1
Query: 309 VGTLYFDVGYSYTSILARGACGAFVTGFMTTISIGSLPSVIEEMKVFYRERMNGYYGVAA 368
VGT+++ VG SY +I ARGACGAF++GFMT +SIG PS IEEMKVFY+ER+NGYYGV
Sbjct: 1 VGTIFYGVGSSYRAIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGVGV 180
Query: 369 YILANFISSFPFLVVIALTSCTITYNMVKFRPGFIHYVFFTLNVYGCLSVIESIMMVVAS 428
YIL+NF+SSFPF+ V+++ + TITY MV+FR F HYV+ L++ GC++V+ES MM++AS
Sbjct: 181 YILSNFLSSFPFVAVMSIATGTITYYMVRFRTEFSHYVYICLDLIGCIAVVESSMMIIAS 360
Query: 429 LVPNFLMGIVTGAGIIGIMMMSSGFFRLLSDLPKVVWRYPISYISYGAWATQ 480
LVPNFLMG++ GAG IG+MMM++G+FR + DLPK+ WRYPISYI+YGAW Q
Sbjct: 361 LVPNFLMGLIIGAGYIGVMMMTAGYFRQIPDLPKIFWRYPISYINYGAWGLQ 516
>TC207843 similar to GB|AAP37786.1|30725528|BT008427 At1g51560 {Arabidopsis
thaliana;} , partial (31%)
Length = 1005
Score = 187 bits (475), Expect = 9e-48
Identities = 89/106 (83%), Positives = 98/106 (91%)
Frame = +1
Query: 375 ISSFPFLVVIALTSCTITYNMVKFRPGFIHYVFFTLNVYGCLSVIESIMMVVASLVPNFL 434
+SSFPFLV IALT+ TITYNMVKFRPG H+VFF LN+Y C+SVIES+MMVVASLVPNFL
Sbjct: 1 LSSFPFLVAIALTTSTITYNMVKFRPGISHFVFFFLNIYSCISVIESLMMVVASLVPNFL 180
Query: 435 MGIVTGAGIIGIMMMSSGFFRLLSDLPKVVWRYPISYISYGAWATQ 480
MGI+TGAGIIGIMMM+SGFFRLLSDLPK VWRYPISYISYG+WA Q
Sbjct: 181 MGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGSWAIQ 318
>TC218388 similar to UP|Q9LMU4 (Q9LMU4) F2H15.7 protein, partial (38%)
Length = 933
Score = 181 bits (460), Expect = 5e-46
Identities = 82/144 (56%), Positives = 112/144 (76%)
Frame = +1
Query: 337 MTTISIGSLPSVIEEMKVFYRERMNGYYGVAAYILANFISSFPFLVVIALTSCTITYNMV 396
+T +SIG PS +E+MKVF RER+NG+YGV +++++N +S+ PFL++I S TI Y MV
Sbjct: 1 VTFMSIGGFPSFVEDMKVFQRERLNGHYGVTSFVISNTLSAMPFLILITFLSGTICYFMV 180
Query: 397 KFRPGFIHYVFFTLNVYGCLSVIESIMMVVASLVPNFLMGIVTGAGIIGIMMMSSGFFRL 456
+ PGF HY+FF L +Y ++V+ES+MM +AS+VPNFLMGI+ GAGI GI M+ SG+FRL
Sbjct: 181 RLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRL 360
Query: 457 LSDLPKVVWRYPISYISYGAWATQ 480
D+PK VWRYP+SYIS+ WA Q
Sbjct: 361 PHDIPKPVWRYPMSYISFHFWALQ 432
>TC209054 similar to UP|Q6K376 (Q6K376) ABC transporter-like protein, partial
(27%)
Length = 913
Score = 145 bits (365), Expect = 5e-35
Identities = 62/132 (46%), Positives = 98/132 (73%)
Frame = +1
Query: 349 IEEMKVFYRERMNGYYGVAAYILANFISSFPFLVVIALTSCTITYNMVKFRPGFIHYVFF 408
+E+MKVF RER+NG+Y V A+++ N S+ P+L+++++ I Y + + F H+V+F
Sbjct: 1 VEDMKVFERERLNGHYSVTAFVIGNTFSAIPYLLLVSIIPGAIAYYLPGLQKDFEHFVYF 180
Query: 409 TLNVYGCLSVIESIMMVVASLVPNFLMGIVTGAGIIGIMMMSSGFFRLLSDLPKVVWRYP 468
++ CL ++ES+MM+VAS+VPNFLMGI+TGAGI GIM++ GFFRL +DLP+ W+YP
Sbjct: 181 ICVLFACLMLVESLMMIVASIVPNFLMGIITGAGIQGIMIIGGGFFRLPNDLPRPFWKYP 360
Query: 469 ISYISYGAWATQ 480
+ Y+++ +A Q
Sbjct: 361 MFYVAFHRYAYQ 396
>BE806563 similar to GP|11994752|db ABC transporter-like protein {Arabidopsis
thaliana}, partial (20%)
Length = 428
Score = 123 bits (309), Expect = 2e-28
Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
Frame = +1
Query: 19 VAYVTQEDVLLGTLTVKETIAYSAHLRLPSTMSKEEVSSIIDGTIIEMGLQDCADRLIGN 78
V +V Q+DV LTV ET+ Y+A LRLP ++S+EE + I E+GL C + +G
Sbjct: 22 VGFVPQDDVHYPHLTVLETLTYAALLRLPKSLSREEKKEHAEMVIAELGLTRCRNSPVGG 201
Query: 79 WH--LRGISGGERKRTSIALEILTKPRLLFLDEPTCGLDSASAFFVVQTLRNIAHDGRTV 136
RGISGGERKR SI E+L P LLF+DEPT GLDS +A +V L +A GRTV
Sbjct: 202 CMALFRGISGGERKRVSIGQEMLVNPSLLFVDEPTSGLDSTTAQLIVSVLHGLARAGRTV 381
Query: 137 ISSIHQPNSEVFALF 151
+++IHQP+S ++ +F
Sbjct: 382 VATIHQPSSRLYRMF 426
>TC218748 similar to UP|Q76CU1 (Q76CU1) PDR-type ABC transporter 2
(Fragment), partial (37%)
Length = 1384
Score = 113 bits (282), Expect = 2e-25
Identities = 101/396 (25%), Positives = 174/396 (43%), Gaps = 20/396 (5%)
Frame = +3
Query: 97 EILTKPRLLFLDEPTCGLDSASAFFVVQTLRNIAHDGRTVISSIHQPNSEVFALFDDLFL 156
E++ P ++F+DEPT GLD+ +A V++T+RN GRTV+ +IHQP+ ++F FD+L L
Sbjct: 9 ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLL 188
Query: 157 LAR-GETVYFGEAKMAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHD 215
+ + G+ +Y G P H + + F+ ++G +I D
Sbjct: 189 MKQGGQEIYVG---------------------PLGHHSSHLINYFE----GIQGVNKIKD 293
Query: 216 VPNSADPFMNLATAQIKSML----VERFKRSTYARRVKYNIQEQSTNEGIETETNYGSQ- 270
N A + ++T+ + L E +K S RR K I+E ST + + SQ
Sbjct: 294 GYNPATWMLEVSTSAKEMELGIDFAEVYKNSELYRRNKALIKELSTPAPGSKDLYFPSQY 473
Query: 271 -ASWWKQLSTLTRRSFVNMCRDIGYYWLRIIINIIVSICVGTLYFDVGYSYTS----ILA 325
S+ Q + + R+ Y +R + + V+ +G++++D+G A
Sbjct: 474 STSFLTQCMACLWKQHWSYWRNPLYTAIRFLYSTAVAAVLGSMFWDLGSKIDKQQDLFNA 653
Query: 326 RGACGAFVTGFMTTISIGSLPSVIEEMKVFYRERMNGYYGVAAYILANFISSFPFLVVIA 385
G+ A V + P V E VFYRE+ G Y Y A + P+++V A
Sbjct: 654 MGSMYAAVLLIGIKNANAVQPVVAVERTVFYREKAAGMYSALPYAFAQVLIELPYVLVQA 833
Query: 386 LTSCTITYNMVKFR---------PGFIHYVFFTLNVYGCLSVIESIMMVVASLVPNFLMG 436
+ I Y M+ F F+++ F T YG +SV ++ PN +
Sbjct: 834 VVYGIIIYAMIGFEWTVTKVIWYLFFMYFTFLTFTYYGMMSV---------AVTPNQHIS 986
Query: 437 IVTGAGIIGIMMMSSGFFRLLSDLPKVVWRYPISYI 472
+ + + + SGF +P+ V +SY+
Sbjct: 987 SIVSSAFYAVWNLFSGFI-----VPRPVIFGSLSYL 1079
>BI892553
Length = 421
Score = 106 bits (264), Expect = 3e-23
Identities = 60/143 (41%), Positives = 82/143 (56%), Gaps = 3/143 (2%)
Frame = +3
Query: 113 GLDSASAFFVVQTLRNIAHDG---RTVISSIHQPNSEVFALFDDLFLLARGETVYFGEAK 169
GLDSA++++V++ + + RTV++SIHQP+SEVF LFD+L LL+ G TVYFG A
Sbjct: 3 GLDSAASYYVMKRIATLDKKDDVHRTVVASIHQPSSEVFQLFDNLCLLSSGRTVYFGPAS 182
Query: 170 MAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNLATA 229
A EFFA GFPCP NPSDH L+ IN DFD T G + + T
Sbjct: 183 AAKEFFASNGFPCPPLMNPSDHLLKTINKDFDQDTELNLGGT------------VTIPTE 326
Query: 230 QIKSMLVERFKRSTYARRVKYNI 252
+ +LV+ +K S V+ +
Sbjct: 327 EAIRILVDSYKSSEMNHEVQKEV 395
>TC218050 weakly similar to UP|Q7PC82 (Q7PC82) PDR14 ABC transporter, partial
(28%)
Length = 1436
Score = 103 bits (256), Expect = 2e-22
Identities = 96/411 (23%), Positives = 169/411 (40%), Gaps = 26/411 (6%)
Frame = +2
Query: 94 IALEILTKPRLLFLDEPTCGLDSASAFFVVQTLRNIAHDGRTVISSIHQPNSEVFALFDD 153
IA+E+++ P ++F+DEPT GLD+ +A V++ ++N+ GRT + +IHQP+ ++F FD+
Sbjct: 2 IAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDE 181
Query: 154 LFLL-ARGETVYFG----EAKMAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLK 208
L L+ + G +Y G + IE+F +
Sbjct: 182 LILMKSGGRIIYSGMLGHHSSRLIEYF-----------------------------QNIP 274
Query: 209 GSQRIHDVPNSADPFMNLATAQIKSML----VERFKRSTYARRVKYNIQEQSTNEGIETE 264
G +I D N A + +A +++ L + +K S R ++E S +
Sbjct: 275 GVPKIKDNYNPATWMLEATSASVEAELKIDFAQIYKESHLCRDTLELVRELSEPPPGTKD 454
Query: 265 TNYGSQ----------ASWWKQLSTLTRRSFVNMCRDIGYYWLRIIINIIVSICVGTLYF 314
++ ++ A WKQ ++ R Y R I I+ +I G +++
Sbjct: 455 LHFSTRFPQNSLGQFMACLWKQ--------HLSYWRSPEYNLTRFIFMIVCAIMFGAVFW 610
Query: 315 DVGYSYTSILARGACGAFVTGFMTTISIG------SLPSVIEEMKVFYRERMNGYYGVAA 368
G + + + ++ I +G LP V E V YRE+ G Y A
Sbjct: 611 QKGNKINN--QQDLFNVLGSMYIAVIFLGLNYCSTILPYVATERAVLYREKFAGMYSSTA 784
Query: 369 YILANFISSFPFLVVIALTSCTITYNMVKFRPGFIHYVFFTLNVYGCLSVIESIMMVVAS 428
Y A P+++V ++ ITY M+ F ++ + + M+V S
Sbjct: 785 YSFAQVAIEIPYILVQSILYVAITYPMIGFHWSVQKVFWYFYTTFCTFLYFVYLGMMVMS 964
Query: 429 LVPNFLMGIVTGAGIIGIMMMSSGFFRLLSDLPK-VVWRYPISYISYGAWA 478
+ N + V + I + SGF +PK VW Y +I AW+
Sbjct: 965 MSSNLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCY---WICPTAWS 1108
>TC222160
Length = 515
Score = 101 bits (251), Expect = 9e-22
Identities = 51/165 (30%), Positives = 97/165 (57%)
Frame = +3
Query: 310 GTLYFDVGYSYTSILARGACGAFVTGFMTTISIGSLPSVIEEMKVFYRERMNGYYGVAAY 369
GT++ +G+S +S++ R A F + +SI +P++++E+K++ E N + +
Sbjct: 15 GTVFSGLGHSLSSVVTRVAAIFVFVSFCSLLSIARVPALLKEIKIYACEESNQHSSTLVF 194
Query: 370 ILANFISSFPFLVVIALTSCTITYNMVKFRPGFIHYVFFTLNVYGCLSVIESIMMVVASL 429
+LA +SS PFL +I+++S + Y +V F ++F LN + L V E +M++VA+L
Sbjct: 195 LLAQLLSSIPFLFLISISSSLVFYFLVGLEDQFSLLMYFVLNFFMTLLVNEGLMLIVATL 374
Query: 430 VPNFLMGIVTGAGIIGIMMMSSGFFRLLSDLPKVVWRYPISYISY 474
+ ++T I MM+ +G+FR+ + LP +W YP+ YI++
Sbjct: 375 WQDVFRSVLTLLCIHVAMMLPAGYFRVRNALPGPMWVYPMLYIAF 509
>TC208020 similar to UP|Q76CU2 (Q76CU2) PDR-type ABC transporter 1, partial
(14%)
Length = 765
Score = 93.2 bits (230), Expect = 2e-19
Identities = 68/207 (32%), Positives = 107/207 (50%), Gaps = 5/207 (2%)
Frame = +2
Query: 53 EEVSSIIDGTIIEMGLQDCADRLIGNWHLRGISGGERKRTSIALEILTKPRLLFLDEPTC 112
EEV +++ L + L+G + G+S +RKR +IA+E++ P ++F+DEPT
Sbjct: 167 EEVMELVE-------LNPLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 325
Query: 113 GLDSASAFFVVQTLRNIAHDGRTVISSIHQPNSEVFALFDDLFLLAR-GETVYFGEAKMA 171
GLD+ +A V++T+RN GRTV+ +IHQP+ ++F FD+LFL+ R G+ +Y G
Sbjct: 326 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG----- 490
Query: 172 IEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNLAT-AQ 230
P R+ S H ++ S + G +I D N A + + T AQ
Sbjct: 491 -----------PLGRH-STHLIKYFES--------IGGVSKIKDGYNPATWMLEVTTSAQ 610
Query: 231 IKSM---LVERFKRSTYARRVKYNIQE 254
S+ + +K S RR K IQE
Sbjct: 611 ELSLGVDFTDLYKNSDLYRRNKQLIQE 691
>CA820193 similar to PIR|T04229|T04 ABC-type transport protein F14M19.30 -
Arabidopsis thaliana, partial (23%)
Length = 423
Score = 91.7 bits (226), Expect = 7e-19
Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Frame = +1
Query: 55 VSSIIDGTIIEMGLQDCADRLIGNWHLRGISGGERKRTSIALEILTKPRLLFLDEPTCGL 114
+++I+ + E+ L ++ + RG+SGGER+R SI L +L P +L LDEPT GL
Sbjct: 1 LAAIVSSLLSELRLTHLSNTRLA----RGLSGGERRRVSIGLCLLHDPAVLLLDEPTSGL 168
Query: 115 DSASAFFVVQTLR-NIAHDGRTVISSIHQPNSEVFALFDDLFLLARGETVYFGEAKMAIE 173
DS SAF V++ L+ RT+I SIHQP+ ++ A D + LL++G+ V+ G
Sbjct: 169 DSTSAFKVMRILKQTCVSRNRTIILSIHQPSFKILACIDRILLLSKGQVVHHGSVATLQA 348
Query: 174 FFAEAGFPCPRKRNPSDHFLRCIN 197
F GF P + N ++ + ++
Sbjct: 349 FLHSNGFTVPHQLNALEYAMEILS 420
>BI699796 similar to PIR|G85167|G85 ABC transporter like protein [imported] -
Arabidopsis thaliana, partial (13%)
Length = 421
Score = 87.0 bits (214), Expect = 2e-17
Identities = 42/116 (36%), Positives = 73/116 (62%)
Frame = +1
Query: 21 YVTQEDVLLGTLTVKETIAYSAHLRLPSTMSKEEVSSIIDGTIIEMGLQDCADRLIGNWH 80
Y Q D+ +TV+E++ +SA LRLPS + + + ++ I + L D L+G +
Sbjct: 64 YCEQNDIHSPNITVEESVMFSAWLRLPSQIDAKTKAEFVNEVIHTIELDGIKDSLVGMPN 243
Query: 81 LRGISGGERKRTSIALEILTKPRLLFLDEPTCGLDSASAFFVVQTLRNIAHDGRTV 136
+ G+S +RKR +IA+E++ P ++F+DEPT GLD+ +A V++ ++N+ GRTV
Sbjct: 244 ISGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRAVKNVVGTGRTV 411
>AW755657
Length = 438
Score = 77.8 bits (190), Expect = 1e-14
Identities = 37/56 (66%), Positives = 45/56 (80%)
Frame = +3
Query: 215 DVPNSADPFMNLATAQIKSMLVERFKRSTYARRVKYNIQEQSTNEGIETETNYGSQ 270
DVPNS DPFMNLATAQIK+ LVE+++RSTYA R K IQE S +EG++ T +GSQ
Sbjct: 270 DVPNSPDPFMNLATAQIKATLVEKYRRSTYATRAKNRIQELSIDEGLQPPTQHGSQ 437
>TC212091 similar to UP|Q9LFG8 (Q9LFG8) ABC transporter-like protein, partial
(12%)
Length = 477
Score = 74.3 bits (181), Expect = 1e-13
Identities = 38/74 (51%), Positives = 49/74 (65%)
Frame = +3
Query: 74 RLIGNWHLRGISGGERKRTSIALEILTKPRLLFLDEPTCGLDSASAFFVVQTLRNIAHDG 133
R+IG+ R +SGGER+R SI +I+ P +LFLDEPT LDS SAF VV+ L+ IA G
Sbjct: 6 RVIGDNGHRSVSGGERRRVSIGTDIIHNPIVLFLDEPTSNLDSTSAFMVVKVLQRIAQSG 185
Query: 134 RTVISSIHQPNSEV 147
I SIH P+ +
Sbjct: 186 NIFIMSIH*PSYRI 227
>BG882711
Length = 402
Score = 72.8 bits (177), Expect = 3e-13
Identities = 45/139 (32%), Positives = 76/139 (54%)
Frame = +1
Query: 181 PCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFMNLATAQIKSMLVERFK 240
PCP ++PSDHFLR IN+DFD + A K Q N +N+ TA L +K
Sbjct: 1 PCPIMQSPSDHFLRAINTDFDRIIAMCKNWQD----DNGDFSSVNMDTAVAIRTLEATYK 168
Query: 241 RSTYARRVKYNIQEQSTNEGIETETNYGSQASWWKQLSTLTRRSFVNMCRDIGYYWLRII 300
S A V+ I + + EG ++ +AS +++ LT RS + + R+ YYWL +
Sbjct: 169 SSADAAAVETMILKLTEKEGPVLKSK--GKASNATRIAVLTWRSLLVVSREWNYYWLHLT 342
Query: 301 INIIVSICVGTLYFDVGYS 319
+ +++++ +GT++ +G+S
Sbjct: 343 LYMLLTLXIGTVFSGLGHS 399
>BQ080393
Length = 347
Score = 70.5 bits (171), Expect = 2e-12
Identities = 33/91 (36%), Positives = 58/91 (63%)
Frame = +2
Query: 21 YVTQEDVLLGTLTVKETIAYSAHLRLPSTMSKEEVSSIIDGTIIEMGLQDCADRLIGNWH 80
Y Q D+ +T++E++ YSA+LRLP +SK+E +D + + L + D ++G
Sbjct: 71 YCEQTDIHSPQVTIRESLLYSAYLRLPKEVSKDEKIQFVDQVMDLVELDNLKDAIVGLPG 250
Query: 81 LRGISGGERKRTSIALEILTKPRLLFLDEPT 111
+ G+S +RKR +IA+E++ P ++F+DEPT
Sbjct: 251 VTGLSTEQRKRLTIAVELVANPSIIFMDEPT 343
>TC209607
Length = 828
Score = 66.2 bits (160), Expect = 3e-11
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 350 EEMKVFYRERMNGYYGVAAYILANFISSFPFLVVIALTSCTITYNMVKFRPGFIHYVFFT 409
+E ++ +E G Y V++Y +AN PFL+++A+ Y +V F+ ++ F
Sbjct: 1 QEREILMKETSCGSYRVSSYAIANGXVYLPFLLILAILFSMPLYWLVGLNRNFLAFLHFL 180
Query: 410 LNVYGCLSVIESIMMVVASLVPNFLMGIVTGAGIIGIMMMSSGFFRLLSDLPKV-VWRYP 468
L ++ L S+++ ++LVPNF++G AG+IG + SG+F ++P ++ +
Sbjct: 181 LLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPNYWIFMHY 360
Query: 469 ISYISY 474
IS Y
Sbjct: 361 ISLFKY 378
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.325 0.140 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,169,596
Number of Sequences: 63676
Number of extensions: 267999
Number of successful extensions: 2022
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 2001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of query: 485
length of database: 12,639,632
effective HSP length: 101
effective length of query: 384
effective length of database: 6,208,356
effective search space: 2384008704
effective search space used: 2384008704
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC146331.10