TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146329.10 - phase: 0 
         (68 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC209184                                                               69  4e-13
TC209185 weakly similar to GB|AAL15380.1|16323334|AY059155 AT3g1...    62  4e-11
TC216377                                                               28  0.91
TC212683 similar to UP|Q6R2J8 (Q6R2J8) Strubbelig receptor famil...    27  1.5
TC227805                                                               26  3.5
TC227806                                                               26  3.5
BM177298                                                               25  5.9
TC224869 weakly similar to UP|ST14_SOLTU (Q41495) STS14 protein ...    25  5.9

>TC209184 
          Length = 466

 Score = 69.3 bits (168), Expect = 4e-13
 Identities = 31/54 (57%), Positives = 43/54 (79%)
 Frame = +2

Query: 2  VAGNAYIEGAQVGCLVKGGVQDLDDGDKSSSRQFNNSLARHINVAAPNFTGIGS 55
          VA  AY+EGAQVGCLVKGGVQD+D+GD+S S+QF +SL+ ++N+    F  +G+
Sbjct: 2  VACKAYMEGAQVGCLVKGGVQDVDEGDRSCSQQFKDSLSGYMNMLVKEFAKVGA 163


>TC209185 weakly similar to GB|AAL15380.1|16323334|AY059155 AT3g15355/MJK13_1
           {Arabidopsis thaliana;} , partial (21%)
          Length = 812

 Score = 62.4 bits (150), Expect = 4e-11
 Identities = 28/41 (68%), Positives = 36/41 (87%)
 Frame = +3

Query: 1   MVAGNAYIEGAQVGCLVKGGVQDLDDGDKSSSRQFNNSLAR 41
           +VA  AY+EGAQVGCLVKGGVQD+D+GD+S S++F +SL R
Sbjct: 336 LVACKAYMEGAQVGCLVKGGVQDVDEGDRSCSQRFKDSLCR 458


>TC216377 
          Length = 2020

 Score = 28.1 bits (61), Expect = 0.91
 Identities = 15/41 (36%), Positives = 23/41 (55%)
 Frame = +2

Query: 1    MVAGNAYIEGAQVGCLVKGGVQDLDDGDKSSSRQFNNSLAR 41
            ++A  AY+EGA +GC   GG  +  +  K +S  F   LA+
Sbjct: 1529 LLACKAYLEGAPIGCGFGGGKAE-HENQKGTSTGFKIMLAK 1648


>TC212683 similar to UP|Q6R2J8 (Q6R2J8) Strubbelig receptor family 8, partial
           (20%)
          Length = 456

 Score = 27.3 bits (59), Expect = 1.5
 Identities = 18/57 (31%), Positives = 27/57 (46%)
 Frame = +3

Query: 4   GNAYIEGAQVGCLVKGGVQDLDDGDKSSSRQFNNSLARHINVAAPNFTGIGSMLVQA 60
           GN Y E  Q+  ++ GG            RQF+ S   ++ +AAP    IG +L +A
Sbjct: 258 GNGY*EDRQLSSVITGG------------RQFS*SCF*YVTLAAPKHCDIGWILCRA 392


>TC227805 
          Length = 1849

 Score = 26.2 bits (56), Expect = 3.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 1    MVAGNAYIEGAQVGCLVKGGVQDLDDGDKSSSRQFNNSLAR 41
            ++A  AY+EGA +GC    G +   +  K +S  F   LA+
Sbjct: 1400 LLACKAYLEGASIGCAFGSG-KTGHENQKGTSTGFKIMLAK 1519


>TC227806 
          Length = 683

 Score = 26.2 bits (56), Expect = 3.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 1   MVAGNAYIEGAQVGCLVKGGVQDLDDGDKSSSRQFNNSLAR 41
           ++A  AY+EGA +GC    G +   +  K +S  F   LA+
Sbjct: 239 LLACKAYLEGASIGCAFGSG-KTGHENQKGTSTGFKIMLAK 358


>BM177298 
          Length = 437

 Score = 25.4 bits (54), Expect = 5.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 15  CLVKGGVQDLDDGDKSSSR 33
           C +K G+QDL+ G+K+  R
Sbjct: 166 CFLKYGIQDLNRGEKAKER 110


>TC224869 weakly similar to UP|ST14_SOLTU (Q41495) STS14 protein precursor,
           partial (65%)
          Length = 1276

 Score = 25.4 bits (54), Expect = 5.9
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 4   GNAYIEG-AQVGCLVKGGVQDLDDGDKSSSR 33
           G  ++ G A+V  L  GGV++LD G   SSR
Sbjct: 920 GEQHVRGEARVRGLYAGGVEELDGGGVRSSR 1012


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.317    0.135    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,202,265
Number of Sequences: 63676
Number of extensions: 19126
Number of successful extensions: 82
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of query: 68
length of database: 12,639,632
effective HSP length: 44
effective length of query: 24
effective length of database: 9,837,888
effective search space: 236109312
effective search space used: 236109312
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)