BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145513.12 + phase: 0
(304 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC211526 similar to UP|Q9LSF2 (Q9LSF2) Gb|AAF02145.1, partial (16%) 305 1e-83
TC232990 similar to UP|Q9LSF2 (Q9LSF2) Gb|AAF02145.1, partial (12%) 240 5e-64
TC221089 119 1e-27
TC221602 109 2e-24
TC217359 similar to GB|AAL31246.1|16974485|AY061919 AT4g32480/F8... 108 4e-24
TC217360 similar to GB|AAL31246.1|16974485|AY061919 AT4g32480/F8... 106 1e-23
TC230458 weakly similar to UP|Q9LIJ8 (Q9LIJ8) Arabidopsis thalia... 104 4e-23
TC229246 similar to UP|Q9LIJ8 (Q9LIJ8) Arabidopsis thaliana geno... 96 3e-20
TC209610 94 1e-19
BE440416 93 1e-19
BF424519 89 3e-18
TC223145 88 4e-18
TC213379 weakly similar to UP|ERV4_YEAST (P53173) ER-derived ves... 86 2e-17
TC210274 86 2e-17
TC219431 83 2e-16
TC230457 similar to UP|Q9LIJ8 (Q9LIJ8) Arabidopsis thaliana geno... 82 2e-16
TC206865 similar to UP|Q9LIJ8 (Q9LIJ8) Arabidopsis thaliana geno... 74 6e-16
BE824349 75 4e-14
BF595826 68 4e-12
BE820981 62 4e-10
>TC211526 similar to UP|Q9LSF2 (Q9LSF2) Gb|AAF02145.1, partial (16%)
Length = 805
Score = 305 bits (782), Expect = 1e-83
Identities = 147/210 (70%), Positives = 170/210 (80%)
Frame = +1
Query: 81 VSDSMDSVEDLLRLSAENANADSYLNMLRLHVSEAAVKFDFLKKQSVSVYNRNVMSFLRE 140
V+D +DSVE+LL L+A N + DSY ++L H SEA+ KF+FLK+ +VS + RN MSFLRE
Sbjct: 1 VTDCIDSVEELLMLNASNVS-DSYKSLLLEHASEASEKFEFLKEGNVSSHRRNAMSFLRE 177
Query: 141 KGHNAAICKTRWDSSGGLTAGNHEFIDVVRMRSGSSTWQNRYFVELDFAVQFEIARPTSR 200
KGHNAAICKTRWDSSGG+TAGN+EFIDVV+ SG +TW RYFV+LDF QFEIARPTS
Sbjct: 178 KGHNAAICKTRWDSSGGVTAGNYEFIDVVQ--SGPATWHKRYFVDLDFVAQFEIARPTSE 351
Query: 201 YSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLSIPPWRKNRYMQNKWFGPYRR 260
Y E ++YVP IFVG EELKRTV LCG + C RGLS+PPWRKNRYMQNKWFGPYRR
Sbjct: 352 YLEFLNYVPRIFVGTEEELKRTVRVLCGVARRCFGKRGLSLPPWRKNRYMQNKWFGPYRR 531
Query: 261 TTNPVHGNPVPDVVSSFSGVKCRLVGFDNA 290
T NPVHGNPVP VVS+ SG KCR VGFD+A
Sbjct: 532 TANPVHGNPVPTVVSALSGAKCRFVGFDDA 621
>TC232990 similar to UP|Q9LSF2 (Q9LSF2) Gb|AAF02145.1, partial (12%)
Length = 817
Score = 240 bits (613), Expect = 5e-64
Identities = 138/259 (53%), Positives = 175/259 (67%), Gaps = 3/259 (1%)
Frame = +2
Query: 42 GECDSSPSLSELVHGFLEEDDGNV-CDSTGNDFDSERVDSVSDSMDSVEDLLRLS-AENA 99
G+ DS SLS L+HGFLE+D N DS +D D + VDSV DS DS + LS +
Sbjct: 14 GDSDSL-SLSCLIHGFLEQDTTNDDSDSVIHDSDWDPVDSVDDSPDSPSNSPSLSFLHSN 190
Query: 100 NADSYLNMLRLHVSEAAVKFDFLKKQSVSVYNRNVMSFLREKGHNAAICKTRWDSSGGLT 159
NAD Y N+L HVSEA FL++++ S++ R+V +FLRE+ H+AA+C+T DSSGG
Sbjct: 191 NADPYRNLLIAHVSEALESLAFLRERNASLFRRSVAAFLRERRHDAAVCETARDSSGG-- 364
Query: 160 AGNHEFIDVVRMRSGSSTWQNRYFVELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSEEL 219
+HEFIDVV+ +GS+T RYFV+LDF QFEIARPT R+SE ++ VPG+FVG +EEL
Sbjct: 365 --SHEFIDVVQ--TGSATC--RYFVDLDFRAQFEIARPTRRFSEALAAVPGVFVGGAEEL 526
Query: 220 KRTVLALCGAVKLCLRSRGLSIPPWRKNRYMQNKWFGPYRRTTNPVHGNPVPDVVSSFS- 278
KRTV C A + C RSRGL +PPWRKNR+MQNKWFGP RRT D F+
Sbjct: 527 KRTVSTACDAARRCFRSRGLPVPPWRKNRFMQNKWFGPCRRTAR--------DTSMGFNG 682
Query: 279 GVKCRLVGFDNAMSEIKHG 297
GV CR+VGFD+ +SE G
Sbjct: 683 GVSCRVVGFDDVVSEAGRG 739
>TC221089
Length = 583
Score = 119 bits (299), Expect = 1e-27
Identities = 59/146 (40%), Positives = 87/146 (59%)
Frame = +3
Query: 123 KKQSVSVYNRNVMSFLREKGHNAAICKTRWDSSGGLTAGNHEFIDVVRMRSGSSTWQNRY 182
K S + + +MS LR +G +A +CK +W+ + AG++E+IDV + NRY
Sbjct: 153 KDNSSPQFKQQLMSLLRYRGFDAGLCKCKWEKNTRFPAGDYEYIDV-------NFAGNRY 311
Query: 183 FVELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLSIP 242
VE+ +FEIAR T +Y+ ++ P IFVG EELK+ V +C A+K ++S + IP
Sbjct: 312 IVEISLVTEFEIARSTDQYAALLDVFPLIFVGKMEELKQVVRLMCTAIKGSMKSMNMYIP 491
Query: 243 PWRKNRYMQNKWFGPYRRTTNPVHGN 268
PWR+ YMQ KWF Y+R T+ V N
Sbjct: 492 PWRRIGYMQAKWFSSYKRITDEVATN 569
>TC221602
Length = 998
Score = 109 bits (272), Expect = 2e-24
Identities = 64/205 (31%), Positives = 102/205 (49%)
Frame = +3
Query: 50 LSELVHGFLEEDDGNVCDSTGNDFDSERVDSVSDSMDSVEDLLRLSAENANADSYLNMLR 109
L ++V F+E + + ST ++ + + ++D+LR + A L +
Sbjct: 36 LVQMVQDFIESESTSPTSSTSSNCHTLNHRT---QYFILQDILRSDGDTACEAKVLKCVL 206
Query: 110 LHVSEAAVKFDFLKKQSVSVYNRNVMSFLREKGHNAAICKTRWDSSGGLTAGNHEFIDVV 169
H+ + + +R ++ ++ G NA+IC T W +S G AG +E+I+V+
Sbjct: 207 KHMRGRK------GAEKTTSLSRWLVMRMKMDGLNASICHTSWATSLGCPAGEYEYIEVI 368
Query: 170 RMRSGSSTWQNRYFVELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSEELKRTVLALCGA 229
+ R V++DF QFE+ARPT Y E+ VP IFV +L + + LC A
Sbjct: 369 TEDDENYAKPMRLIVDIDFRSQFEVARPTQHYKELTDSVPVIFVAIESKLCKIISLLCSA 548
Query: 230 VKLCLRSRGLSIPPWRKNRYMQNKW 254
K CLR +GL +PPWR YMQ KW
Sbjct: 549 AKQCLREKGLHVPPWRTTSYMQAKW 623
>TC217359 similar to GB|AAL31246.1|16974485|AY061919 AT4g32480/F8B4_180
{Arabidopsis thaliana;} , partial (31%)
Length = 695
Score = 108 bits (269), Expect = 4e-24
Identities = 46/126 (36%), Positives = 78/126 (61%)
Frame = +2
Query: 138 LREKGHNAAICKTRWDSSGGLTAGNHEFIDVVRMRSGSSTWQNRYFVELDFAVQFEIARP 197
L++ G+++AICKT+W SS + +G H F+DV+ RS + R +EL+F +FE+AR
Sbjct: 155 LQKSGYDSAICKTKWSSSPSIPSGEHTFLDVIDSRSKKQ--EIRVIIELNFRAEFEMARA 328
Query: 198 TSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLSIPPWRKNRYMQNKWFGP 257
+ Y+ ++ +P ++VG E L + LC K C++ + + PWRK++Y+ KW GP
Sbjct: 329 SEEYNGLVRKLPEVYVGKIERLSNIIKVLCMGAKRCMKENKMHMGPWRKHKYVHAKWLGP 508
Query: 258 YRRTTN 263
+R T+
Sbjct: 509 CKRNTS 526
>TC217360 similar to GB|AAL31246.1|16974485|AY061919 AT4g32480/F8B4_180
{Arabidopsis thaliana;} , partial (31%)
Length = 1173
Score = 106 bits (264), Expect = 1e-23
Identities = 49/127 (38%), Positives = 78/127 (60%), Gaps = 1/127 (0%)
Frame = +1
Query: 138 LREKGHNAAICKTRWDSS-GGLTAGNHEFIDVVRMRSGSSTWQNRYFVELDFAVQFEIAR 196
L+ G+N+AICKT+W SS + +G H F+DV+ S S + R +EL+F +FE+AR
Sbjct: 493 LQNSGYNSAICKTKWRSSPSNIPSGEHTFLDVID--STSKKQEVRVIIELNFRAEFEMAR 666
Query: 197 PTSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLSIPPWRKNRYMQNKWFG 256
+ Y+ ++S +P ++VG E L + LC K C++ + + PWRK++YMQ KW G
Sbjct: 667 ASEEYNGLVSKLPEVYVGKIERLSNIIKVLCMGAKKCMKENKMHMGPWRKHKYMQAKWLG 846
Query: 257 PYRRTTN 263
+R T+
Sbjct: 847 SCKRNTS 867
>TC230458 weakly similar to UP|Q9LIJ8 (Q9LIJ8) Arabidopsis thaliana genomic
DNA, chromosome 3, BAC clone:F5N5, partial (33%)
Length = 795
Score = 104 bits (260), Expect = 4e-23
Identities = 52/138 (37%), Positives = 78/138 (55%)
Frame = +2
Query: 124 KQSVSVYNRNVMSFLREKGHNAAICKTRWDSSGGLTAGNHEFIDVVRMRSGSSTWQNRYF 183
K+ S + V L G++A+ICK+RW+ S AG +E+IDV+ + R
Sbjct: 68 KRKDSFCRKIVTDGLLALGYDASICKSRWEKSPSYPAGGYEYIDVMMGKE-------RVV 226
Query: 184 VELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLSIPP 243
+++DF +FEIAR T Y I+ +P IFVG E L+ V + A K L+ +G+ +PP
Sbjct: 227 IDIDFRSEFEIARSTKAYKTILQNLPYIFVGTCERLQSIVALVSEAAKQSLKKKGMHVPP 406
Query: 244 WRKNRYMQNKWFGPYRRT 261
WR+ Y++ KW PY RT
Sbjct: 407 WRRTEYVKAKWLSPYTRT 460
>TC229246 similar to UP|Q9LIJ8 (Q9LIJ8) Arabidopsis thaliana genomic DNA,
chromosome 3, BAC clone:F5N5, partial (42%)
Length = 1016
Score = 95.5 bits (236), Expect = 3e-20
Identities = 51/145 (35%), Positives = 75/145 (51%)
Frame = +3
Query: 134 VMSFLREKGHNAAICKTRWDSSGGLTAGNHEFIDVVRMRSGSSTWQNRYFVELDFAVQFE 193
V L G++++IC ++WD + AG +E+IDVV R +++DF +FE
Sbjct: 135 VTESLSSLGYDSSICTSKWDKTPTCPAGEYEYIDVV-------VEGERLIIDIDFRSEFE 293
Query: 194 IARPTSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLSIPPWRKNRYMQNK 253
IAR T Y I+ +P IFVG S+ L + V A+ A K L+ +G+ +PPWRK YM K
Sbjct: 294 IARSTGTYKAILQSLPFIFVGKSDRLCQIVAAVSEAAKQSLKKKGMHVPPWRKAEYMLVK 473
Query: 254 WFGPYRRTTNPVHGNPVPDVVSSFS 278
W N + V D + S
Sbjct: 474 WLSSSCTRANLTSSSAVNDSTENLS 548
>TC209610
Length = 941
Score = 93.6 bits (231), Expect = 1e-19
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Frame = +1
Query: 139 REKGHNAAICKTRWDSSGGLTAGNHEFIDVV-RMRSGSSTWQNRYFVELDFAVQFEIARP 197
R G +A +C ++W SG + G+HE+ID++ SGSS R V++DF FEIAR
Sbjct: 10 RLSGPDAGVCASKWQGSGKVPGGDHEYIDIIIDNNSGSS---ERLIVDIDFRSHFEIARA 180
Query: 198 TSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLSIPPWRKNRYMQNKWFGP 257
Y I+ +P +VG+ LK+ + + A + L+ + +PPWR Y+Q KW P
Sbjct: 181 VDSYDRILHSLPFFYVGSFTRLKQFLGIMEEATRSSLKQNSMPLPPWRSLAYLQAKWQSP 360
Query: 258 YRRTTNPVHGNPVPD 272
Y R T+ GN + D
Sbjct: 361 YERYTHS-EGNNISD 402
>BE440416
Length = 475
Score = 93.2 bits (230), Expect = 1e-19
Identities = 54/77 (70%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Frame = +2
Query: 4 ARKKRVTDPFNDEAKARLV-GADLRRLSDVSSGSEHSGTGECDSSPSLSELVHGFLEED- 61
ARKKRVTDPF+DEAKARLV G D R+LS VSSGSEHSG G+ SP LSELVH FLE++
Sbjct: 248 ARKKRVTDPFDDEAKARLVGGGDHRQLSYVSSGSEHSGNGD-GHSPCLSELVHDFLEDNG 424
Query: 62 DGNVCDSTGNDFDSERV 78
D +S GN+FDSERV
Sbjct: 425 DSENNNSAGNEFDSERV 475
>BF424519
Length = 322
Score = 88.6 bits (218), Expect = 3e-18
Identities = 38/46 (82%), Positives = 41/46 (88%)
Frame = -3
Query: 245 RKNRYMQNKWFGPYRRTTNPVHGNPVPDVVSSFSGVKCRLVGFDNA 290
RKNRYMQNKWFGPYRRT NPVHGNPVP VVS+ SG KCR VGF++A
Sbjct: 320 RKNRYMQNKWFGPYRRTANPVHGNPVPTVVSALSGPKCRFVGFEHA 183
>TC223145
Length = 646
Score = 88.2 bits (217), Expect = 4e-18
Identities = 42/103 (40%), Positives = 56/103 (53%)
Frame = +3
Query: 158 LTAGNHEFIDVVRMRSGSSTWQNRYFVELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSE 217
L +E+I V+ + R V++DF QFE+ARPT Y E+ VP I VG
Sbjct: 3 LXXXXYEYIXVIIEDXQNCGXXTRLIVDIDFRSQFEVARPTQNYKELTDSVPVILVGTEN 182
Query: 218 ELKRTVLALCGAVKLCLRSRGLSIPPWRKNRYMQNKWFGPYRR 260
+L + + LC A K CLR +GL +PPWR YMQ KW R+
Sbjct: 183 KLCKIISLLCSAAKQCLREKGLHVPPWRTASYMQAKWLSVSRK 311
>TC213379 weakly similar to UP|ERV4_YEAST (P53173) ER-derived vesicles
protein ERV14, partial (14%)
Length = 682
Score = 86.3 bits (212), Expect = 2e-17
Identities = 42/99 (42%), Positives = 57/99 (57%)
Frame = +3
Query: 160 AGNHEFIDVVRMRSGSSTWQNRYFVELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSEEL 219
AG +E+IDV+ + R V++DF +FEIARPT Y I+ +P +FVG E L
Sbjct: 15 AGEYEYIDVIMGKE-------RVVVDVDFRSEFEIARPTKTYKAILQTLPYVFVGTCERL 173
Query: 220 KRTVLALCGAVKLCLRSRGLSIPPWRKNRYMQNKWFGPY 258
+ V A KL L+ RG+ +PPWRK Y+ KW PY
Sbjct: 174 QSIVAIASEAAKLSLKKRGMHVPPWRKVEYVTAKWLSPY 290
>TC210274
Length = 874
Score = 85.9 bits (211), Expect = 2e-17
Identities = 45/142 (31%), Positives = 80/142 (55%), Gaps = 4/142 (2%)
Frame = +1
Query: 119 FDFLKKQS---VSVYNRNVMSFLREKGHNAAICKTRWDSSGGLTAGNHEFIDVVRMRSGS 175
F LK S ++ R V+ L E+G + +C ++W ++ G HE+I+V+ + +
Sbjct: 61 FSCLKANSSDCITCLRRRVVDGLCERGFSTNLCISKWRTTKKFPGGCHEYIEVI---ANT 231
Query: 176 STWQNRYF-VELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCL 234
ST + +F VEL+ QF+IA+ + Y +++S +P ++G E L V +C A K +
Sbjct: 232 STRKKIHFLVELELREQFQIAKASENYRKLVSCLPEFYIGKLEYLTAIVRVMCNAAKKSM 411
Query: 235 RSRGLSIPPWRKNRYMQNKWFG 256
+ + + + PWRK+ +MQ KW G
Sbjct: 412 KEKKMHVGPWRKSSFMQMKWSG 477
>TC219431
Length = 972
Score = 82.8 bits (203), Expect = 2e-16
Identities = 40/126 (31%), Positives = 71/126 (55%), Gaps = 1/126 (0%)
Frame = +3
Query: 132 RNVMSFLREKGHNAAICKTRWDSSGGLTAGNHEFIDVVRMRSGSSTWQNRYF-VELDFAV 190
R V+ L G + +C ++W+++ G HE+I+V+ + +ST + +F VEL+
Sbjct: 342 RRVVDGLCRTGFSTNLCISKWETTKKFPGGCHEYIEVI---ANTSTMKKIHFLVELELKE 512
Query: 191 QFEIARPTSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLSIPPWRKNRYM 250
QF+IA+ + Y + S +P ++G E L V +C A K ++ + + + PWRK+ +M
Sbjct: 513 QFQIAKASENYQNLESCLPEFYIGKPEYLTAIVRVMCNAAKKSMKEKKMHVGPWRKSSFM 692
Query: 251 QNKWFG 256
Q KW G
Sbjct: 693 QMKWSG 710
>TC230457 similar to UP|Q9LIJ8 (Q9LIJ8) Arabidopsis thaliana genomic DNA,
chromosome 3, BAC clone:F5N5, partial (23%)
Length = 699
Score = 82.4 bits (202), Expect = 2e-16
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +2
Query: 181 RYFVELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLS 240
R +++DF +FEIAR T Y I+ +P IFVG E L+ V + A K L+ +G+
Sbjct: 2 RILIDIDFRSEFEIARSTKAYKTILQNLPYIFVGTCERLQSIVALVSEAAKQSLKKKGMH 181
Query: 241 IPPWRKNRYMQNKWFGPYRRTTN 263
+PPWR+ Y++ KW PY RTTN
Sbjct: 182 VPPWRRAEYVKAKWLSPYTRTTN 250
>TC206865 similar to UP|Q9LIJ8 (Q9LIJ8) Arabidopsis thaliana genomic DNA,
chromosome 3, BAC clone:F5N5, partial (56%)
Length = 1761
Score = 73.9 bits (180), Expect(2) = 6e-16
Identities = 36/97 (37%), Positives = 51/97 (52%)
Frame = +3
Query: 161 GNHEFIDVVRMRSGSSTWQNRYFVELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSEELK 220
G +EFID + R V++DF +FE+AR T Y ++ +P +VG SE L
Sbjct: 933 GEYEFIDAI-------VEGERLIVDVDFRSEFEVARSTGTYKAMLQSLPFTYVGKSERLT 1091
Query: 221 RTVLALCGAVKLCLRSRGLSIPPWRKNRYMQNKWFGP 257
V + A K L+ +G+ +PPWRK YM KW P
Sbjct: 1092 EIVAIVSEAAKQSLKKKGMHVPPWRKRDYMLAKWLSP 1202
Score = 27.3 bits (59), Expect(2) = 6e-16
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Frame = +2
Query: 46 SSPSLSELVHGFLEEDDGNVCDSTGNDFDSERVDSVSDSMDSVEDLLRLSAENANADSYL 105
SS L+++V F+EE N + +S SD D + E++NAD+
Sbjct: 473 SSVCLAKMVQNFMEEQPPAPPKCGRNRCNCFNANS-SDEDDFDLFGAAPAPESSNADATE 649
Query: 106 NMLRLHVSEAAVKFDFLKKQSVSVYNRNVMSFLREK-------------GHNAAICKTRW 152
++ L + A+V L + +N SF R+ G++++ICK++W
Sbjct: 650 SLKSL-IPCASVGERNLLADVARIVEKNGKSFKRKDDLRKVVAEALSSLGYDSSICKSKW 826
Query: 153 DSSGGLTAG 161
+ + AG
Sbjct: 827 EKTSSCPAG 853
>BE824349
Length = 706
Score = 75.1 bits (183), Expect = 4e-14
Identities = 40/109 (36%), Positives = 58/109 (52%)
Frame = -3
Query: 180 NRYFVELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGL 239
N VE+ + EI T +Y+ ++ IFVG EE K+ V +C A+K ++S +
Sbjct: 677 NXXIVEISXVTEXEIXXSTDQYAALLDVFXLIFVGKMEEXKQVVRLMCTAIKGXMKSMNM 498
Query: 240 SIPPWRKNRYMQNKWFGPYRRTTNPVHGNPVPDVVSSFSGVKCRLVGFD 288
IPPWR+ YMQ KWF Y+R T+ V N +S + R +GFD
Sbjct: 497 YIPPWRRIGYMQAKWFSSYKRITDEVATNR-----ASSAFFTTRSIGFD 366
>BF595826
Length = 416
Score = 68.2 bits (165), Expect = 4e-12
Identities = 30/67 (44%), Positives = 41/67 (60%)
Frame = +1
Query: 191 QFEIARPTSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLSIPPWRKNRYM 250
+FEIAR T Y ++ +P IFVGNSE L + + + A K L+ +G+ +PPWRK YM
Sbjct: 4 EFEIARSTGTYKAMLQSLPFIFVGNSERLTQILAIVSDAAKQSLKKKGMHVPPWRKRDYM 183
Query: 251 QNKWFGP 257
KW P
Sbjct: 184 LAKWLSP 204
>BE820981
Length = 737
Score = 61.6 bits (148), Expect = 4e-10
Identities = 31/89 (34%), Positives = 46/89 (50%)
Frame = -3
Query: 184 VELDFAVQFEIARPTSRYSEIMSYVPGIFVGNSEELKRTVLALCGAVKLCLRSRGLSIPP 243
+++DF +FE AR T I+ + IFVG S+ L + V A+ A K L+ +G+ +P
Sbjct: 729 IDIDFRSEFEXARSTGXXKAILQSLXFIFVGKSDRLCQIVAAVSEAAKQSLKKKGMHVPX 550
Query: 244 WRKNRYMQNKWFGPYRRTTNPVHGNPVPD 272
WRK Y+ KW NP + V D
Sbjct: 549 WRKAEYILAKWLSSSCTRANPPSSSAVND 463
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,351,647
Number of Sequences: 63676
Number of extensions: 165340
Number of successful extensions: 903
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of query: 304
length of database: 12,639,632
effective HSP length: 97
effective length of query: 207
effective length of database: 6,463,060
effective search space: 1337853420
effective search space used: 1337853420
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC145513.12