TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145331.13 + phase: 0 /partial
         (365 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC231101 similar to UP|Q93Z70 (Q93Z70) At2g19940/F6F22.3, partia...   449  e-127
TC212645 weakly similar to UP|Q93Z70 (Q93Z70) At2g19940/F6F22.3,...   125  4e-29
AW472483 weakly similar to GP|16604368|gb| At2g19940/F6F22.3 {Ar...   112  3e-25
BI347338                                                               29  2.9
TC214107 similar to PIR|T49142|T49142 CCR4-associated factor 1-l...    29  3.8
TC226011 similar to UP|Q93X45 (Q93X45) Xaa-Pro aminopeptidase 2 ...    28  6.5

>TC231101 similar to UP|Q93Z70 (Q93Z70) At2g19940/F6F22.3, partial (63%)
          Length = 1073

 Score =  449 bits (1155), Expect = e-127
 Identities = 219/244 (89%), Positives = 236/244 (95%)
 Frame = +3

Query: 122 FRLRDVSEYEEWYGQPHRAPDLQKEAIYGLTEVLREEIKNARLVANPGCYPTSIQLPLVP 181
           FRL+D+SEYEEWYGQPHRAPDLQKEAIYGLTEVLREEI+NARLVANPGCYPTS+QLPLVP
Sbjct: 18  FRLKDLSEYEEWYGQPHRAPDLQKEAIYGLTEVLREEIQNARLVANPGCYPTSVQLPLVP 197

Query: 182 LIKANLIQTTNIIVDAKSGVSGAGRSAKENLLFTEVTEGMSSYGVTRHRHAPEIEQGLAD 241
           LIKA+LI+  NII+DAKSGVSGAGRSAKENLLFTEVTEG++SYGVTRHRH PEIEQGLAD
Sbjct: 198 LIKASLIELKNIIIDAKSGVSGAGRSAKENLLFTEVTEGLNSYGVTRHRHVPEIEQGLAD 377

Query: 242 AAGSKVTISFTPHLIPMSRGMQSTIYVEMAPGVRIDDLRHQLQLSYEDEEFVVLLENGVI 301
           A+GSKVT+SFTPHLIPMSRGMQSTIYVEMAPGVRI+DL  QL+LSYE+EEFVV+LENG I
Sbjct: 378 ASGSKVTVSFTPHLIPMSRGMQSTIYVEMAPGVRIEDLYQQLKLSYENEEFVVVLENGAI 557

Query: 302 PRTHSVKGSNYCLFNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNLIMGFPENLGLQY 361
           PRTHSVKG+NYCL NVFPDRIPGRAIIISVIDNLVKGASGQALQNLNL+MGFPENLGL Y
Sbjct: 558 PRTHSVKGTNYCLINVFPDRIPGRAIIISVIDNLVKGASGQALQNLNLLMGFPENLGLHY 737

Query: 362 LPLF 365
           LPLF
Sbjct: 738 LPLF 749


>TC212645 weakly similar to UP|Q93Z70 (Q93Z70) At2g19940/F6F22.3, partial
           (15%)
          Length = 490

 Score =  125 bits (313), Expect = 4e-29
 Identities = 63/78 (80%), Positives = 68/78 (86%), Gaps = 5/78 (6%)
 Frame = +1

Query: 13  IKCSIKSS-----QNNVRVGVLGASGYTGSEILRLLANHPQFGVALMTADRKAGQAISSV 67
           +KCS KS      QN VRVGVLGASGYTGSE++RLLANHPQFG+ALMTADRKAGQ ISSV
Sbjct: 256 VKCSSKSGNPTSLQNGVRVGVLGASGYTGSEVMRLLANHPQFGIALMTADRKAGQPISSV 435

Query: 68  FPHLGTQDLPDLIAIKDA 85
           FPHL T+DLPDLIAIKDA
Sbjct: 436 FPHLSTRDLPDLIAIKDA 489


>AW472483 weakly similar to GP|16604368|gb| At2g19940/F6F22.3 {Arabidopsis
           thaliana}, partial (13%)
          Length = 407

 Score =  112 bits (280), Expect = 3e-25
 Identities = 57/72 (79%), Positives = 62/72 (85%), Gaps = 5/72 (6%)
 Frame = +2

Query: 13  IKCSIKS-----SQNNVRVGVLGASGYTGSEILRLLANHPQFGVALMTADRKAGQAISSV 67
           +KCS +S     SQN VRVGV+GASGYTGSE+LRLLANHPQFG+ALMTADRKAGQ ISSV
Sbjct: 191 VKCSSQSGNPSSSQNAVRVGVVGASGYTGSEVLRLLANHPQFGIALMTADRKAGQPISSV 370

Query: 68  FPHLGTQDLPDL 79
           FPHL T DLPDL
Sbjct: 371 FPHLSTWDLPDL 406


>BI347338 
          Length = 581

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 325 RAIIISVIDNLVKGASGQALQNLNLIMGFPENLGLQYLPLF 365
           +AI  +V DN+++  S Q L +L L+    +N+G  Y+  F
Sbjct: 263 KAIAAAVYDNILEVPSDQKLPSLYLLDSIVKNIGRDYIKYF 385


>TC214107 similar to PIR|T49142|T49142 CCR4-associated factor 1-like protein
           - Arabidopsis thaliana {Arabidopsis thaliana;} , partial
           (84%)
          Length = 1003

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/38 (39%), Positives = 21/38 (54%), Gaps = 1/38 (2%)
 Frame = -1

Query: 200 GVSGAGRSAKE-NLLFTEVTEGMSSYGVTRHRHAPEIE 236
           G+   G   +E + L TE  +G+ S GVTRH    E+E
Sbjct: 466 GIHAVGGVTREIDALTTEKIDGVGSVGVTRHVEVTEVE 353


>TC226011 similar to UP|Q93X45 (Q93X45) Xaa-Pro aminopeptidase 2  , partial
            (94%)
          Length = 2304

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 31/105 (29%), Positives = 42/105 (39%), Gaps = 8/105 (7%)
 Frame = +3

Query: 205  GRSAKENLLFTEVTEGMSSYGVTR---HRHAPEIEQGLADAAGSKVTISFTPHLI---PM 258
            G  A  N  F   T G S   + R    +   +   G     GS + +   PHLI   P 
Sbjct: 1515 GHIALGNARFPNGTNGHSLDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPQ 1694

Query: 259  SRG--MQSTIYVEMAPGVRIDDLRHQLQLSYEDEEFVVLLENGVI 301
            +R   +QS++ V   PG             YED EF + LEN +I
Sbjct: 1695 ARNVPLQSSMTVTDEPGY------------YEDGEFGIRLENVLI 1793


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.319    0.138    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,204,231
Number of Sequences: 63676
Number of extensions: 167742
Number of successful extensions: 788
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of query: 365
length of database: 12,639,632
effective HSP length: 99
effective length of query: 266
effective length of database: 6,335,708
effective search space: 1685298328
effective search space used: 1685298328
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)