BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145329.11 - phase: 0
(360 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226777 similar to PIR|T01514|T01514 glycosyl transferase homol... 507 e-144
TC226776 similar to GB|AAP68287.1|31711862|BT008848 At1g02720 {A... 399 e-111
TC233363 similar to PIR|T01514|T01514 glycosyl transferase homol... 325 3e-89
TC221725 similar to UP|Q9FX71 (Q9FX71) T6J4.1 protein, partial (... 157 2e-70
TC230983 similar to GB|AAB61117.1|2194142|F20P5 ESTs gb|N38288,g... 228 3e-60
TC231167 similar to UP|Q9FQZ3 (Q9FQZ3) Avr9/Cf-9 rapidly elicite... 218 4e-57
TC231166 similar to UP|Q9FQZ3 (Q9FQZ3) Avr9/Cf-9 rapidly elicite... 206 1e-53
TC226778 similar to GB|AAP68287.1|31711862|BT008848 At1g02720 {A... 206 2e-53
BE803604 193 9e-50
BI893055 similar to GP|2194142|gb| ESTs gb|N38288 gb|T43486 gb|A... 178 3e-45
AW101289 174 6e-44
AI416659 166 2e-41
BQ610828 homologue to PIR|T00647|T006 glycosyl transferase homol... 159 1e-39
TC232966 similar to PIR|T01514|T01514 glycosyl transferase homol... 158 3e-39
BQ133883 similar to GP|4835227|emb glycosyltransferase-like prot... 158 3e-39
BM528328 homologue to GP|28372866|gb At3g06260 {Arabidopsis thal... 157 9e-39
BG790410 155 2e-38
TC221952 homologue to UP|Q8LF94 (Q8LF94) Avr9/Cf-9 rapidly elici... 154 5e-38
BQ630026 similar to GP|2194142|gb| ESTs gb|N38288 gb|T43486 gb|A... 138 3e-33
TC210585 similar to UP|Q9FX71 (Q9FX71) T6J4.1 protein, partial (... 119 2e-27
>TC226777 similar to PIR|T01514|T01514 glycosyl transferase homolog T10M13.14
- Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(83%)
Length = 1247
Score = 507 bits (1306), Expect = e-144
Identities = 248/333 (74%), Positives = 275/333 (82%), Gaps = 8/333 (2%)
Frame = +3
Query: 29 YPALAIRSSIIHHI--------PHHDYRFYFHTSPFFRNADQCEPISREIGACHPSLVHV 80
+PA AIRSS HH+ P +R +PF AD S C PSLVHV
Sbjct: 6 HPAEAIRSS--HHLDGLLRLPPPRLSFR---PAAPFRNAADGKCASSVPTSVCDPSLVHV 170
Query: 81 AITLDVEYLRGSIAAVHSILYHASCPENVFFHFLVTDTDLETLVRTTFPQLRFKVYYFDR 140
AITLDVEYLRGSIAAVHSIL H+ CPEN+FFHFLV++T+LE+LV++TFPQL FKVYYFD
Sbjct: 171 AITLDVEYLRGSIAAVHSILQHSQCPENIFFHFLVSETNLESLVKSTFPQLNFKVYYFDP 350
Query: 141 NIVKNLISTSVRQALEQPLNYARNYLADLLESCVKRVIYLDSDLVLQDDIAKLWNTDLGL 200
IV+NLISTSVRQALEQPLNYARNYLADLLE CV+RVIYLDSDLV+ DDIAKLW+T LG
Sbjct: 351 EIVRNLISTSVRQALEQPLNYARNYLADLLEPCVERVIYLDSDLVVVDDIAKLWSTSLGS 530
Query: 201 NTIGAPQYCHANFTKYFTAAFWSDPVFSTTFEKRKACYFNTGVMVMDLVKWRKKGYTERI 260
TIGAP+YCHANFTKYFTAAFWSD F+ F R+ CYFNTGVMV+DLV+WR+ GY++RI
Sbjct: 531 RTIGAPEYCHANFTKYFTAAFWSDTRFARAFAGRRPCYFNTGVMVIDLVRWRRIGYSKRI 710
Query: 261 ERWMEIQKVERIYELGSLPPFLLVFAGHVAAIEHRWNQHGLGGDNVKGSCRDLHPGPVSL 320
ERWMEIQK +RIYELGSLPPFLLVFAGHVA IEHRWNQHGLGGDNVKGSCRDLH GPVSL
Sbjct: 711 ERWMEIQKNDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVKGSCRDLHAGPVSL 890
Query: 321 LHWSGSGKPWRRLDESKPCPLDALWEPFDLYGH 353
LHWSGSGKPW RLD +PCPLDALW P+DLYGH
Sbjct: 891 LHWSGSGKPWTRLDSKQPCPLDALWAPYDLYGH 989
>TC226776 similar to GB|AAP68287.1|31711862|BT008848 At1g02720 {Arabidopsis
thaliana;} , partial (68%)
Length = 1307
Score = 399 bits (1024), Expect = e-111
Identities = 204/287 (71%), Positives = 233/287 (81%), Gaps = 7/287 (2%)
Frame = +1
Query: 4 IIKFSRFFSAVMTVIIISPSLHSSHYPALAIRSSIIHHIPH----HDYRFYFHTSPFFRN 59
+++FS FFSA M VI++SPSL S H PA AIRSS HH+ R F +P FRN
Sbjct: 454 LMRFSGFFSAAMLVILLSPSLQSFH-PAEAIRSS--HHLDGLLRLPPPRLSFRPAPRFRN 624
Query: 60 A---DQCEPISREIGACHPSLVHVAITLDVEYLRGSIAAVHSILYHASCPENVFFHFLVT 116
A ++C S C PSLVHVAITLDVEYLRGSIAAVHSIL H+ CPEN+FFHFLV+
Sbjct: 625 AADANKCASSSVSTSVCDPSLVHVAITLDVEYLRGSIAAVHSILQHSQCPENIFFHFLVS 804
Query: 117 DTDLETLVRTTFPQLRFKVYYFDRNIVKNLISTSVRQALEQPLNYARNYLADLLESCVKR 176
+T+LE+LV++TFPQL FKVYYFD IV+NLISTSVRQALEQPLNYARNYLADLLE CV+R
Sbjct: 805 ETNLESLVKSTFPQLNFKVYYFDPEIVRNLISTSVRQALEQPLNYARNYLADLLEPCVER 984
Query: 177 VIYLDSDLVLQDDIAKLWNTDLGLNTIGAPQYCHANFTKYFTAAFWSDPVFSTTFEKRKA 236
VIYLDSDLVL DDIAKLW+T LG TIGAP+YCHANFTKYFTA FWSD F++ F R+
Sbjct: 985 VIYLDSDLVLVDDIAKLWSTSLGSRTIGAPEYCHANFTKYFTAGFWSDMRFASAFAGRRP 1164
Query: 237 CYFNTGVMVMDLVKWRKKGYTERIERWMEIQKVERIYELGSLPPFLL 283
CYFNTGVMV+DLV+WRK GY++RIERWMEIQK +RIYELGSLPPFLL
Sbjct: 1165CYFNTGVMVIDLVRWRKIGYSKRIERWMEIQKNDRIYELGSLPPFLL 1305
>TC233363 similar to PIR|T01514|T01514 glycosyl transferase homolog T10M13.14
- Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(52%)
Length = 637
Score = 325 bits (832), Expect = 3e-89
Identities = 146/180 (81%), Positives = 159/180 (88%)
Frame = +3
Query: 174 VKRVIYLDSDLVLQDDIAKLWNTDLGLNTIGAPQYCHANFTKYFTAAFWSDPVFSTTFEK 233
V+RVIYLDSDLV+ DD+AKLW+ L IGAP+YCHANFTKYFTA FWS+ S TF +
Sbjct: 3 VERVIYLDSDLVVVDDVAKLWSASLDSRAIGAPEYCHANFTKYFTAGFWSESRLSGTFAQ 182
Query: 234 RKACYFNTGVMVMDLVKWRKKGYTERIERWMEIQKVERIYELGSLPPFLLVFAGHVAAIE 293
R+ACYFNTGVMVMDLVKWRK+GYT+RIERWMEIQK +RIYELGSLPPFLLVFAGHVA IE
Sbjct: 183 RRACYFNTGVMVMDLVKWRKEGYTKRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIE 362
Query: 294 HRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPWRRLDESKPCPLDALWEPFDLYGH 353
HRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPW RL +PCPLD+LW PFDLY H
Sbjct: 363 HRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPWLRLSSKRPCPLDSLWAPFDLYTH 542
>TC221725 similar to UP|Q9FX71 (Q9FX71) T6J4.1 protein, partial (61%)
Length = 768
Score = 157 bits (397), Expect(2) = 2e-70
Identities = 77/145 (53%), Positives = 102/145 (70%), Gaps = 3/145 (2%)
Frame = +2
Query: 51 FHTSPFFRNADQCEPISREIGACHPSLVHVAITLDVEYLRGSIAAVHSILYHASCPENVF 110
F +P FRN +C R S++H+A+TLD YLRGS+A V S+L HASCPENV
Sbjct: 95 FREAPAFRNGRECRNRPRS-----DSVIHIAMTLDATYLRGSVAGVFSVLQHASCPENVV 259
Query: 111 FHFLVTD---TDLETLVRTTFPQLRFKVYYFDRNIVKNLISTSVRQALEQPLNYARNYLA 167
FHF+ T T+L ++ TFP L F +Y+FD N+V+ IS S+R+AL+QPLNYAR YLA
Sbjct: 260 FHFIATTHRRTELRRIITATFPYLSFHLYHFDANLVRGKISYSIRRALDQPLNYARMYLA 439
Query: 168 DLLESCVKRVIYLDSDLVLQDDIAK 192
DLL + V+R+IY DSDL++ DD+AK
Sbjct: 440 DLLPATVRRIIYFDSDLIVVDDVAK 514
Score = 127 bits (318), Expect(2) = 2e-70
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +3
Query: 192 KLWNTDLGLNTIGAPQYCHANFTKYFTAAFWSDPVFSTTFEKRKACYFNTGVMVMDLVKW 251
KLW+ DL +GAP+YCHANFT YFT FWS+P ++ +F++R ACYFNTGVMV+DL KW
Sbjct: 513 KLWSIDLHARVLGAPEYCHANFTNYFTHRFWSNPSYAASFKRRDACYFNTGVMVIDLWKW 692
Query: 252 RKKGYTERIERWMEIQKVERIYELG 276
R+ YTE++E WM IQK RIYELG
Sbjct: 693 REGRYTEKLETWMRIQKRNRIYELG 767
>TC230983 similar to GB|AAB61117.1|2194142|F20P5 ESTs
gb|N38288,gb|T43486,gb|AA395242 come from this gene.
{Arabidopsis thaliana;} , partial (34%)
Length = 938
Score = 228 bits (581), Expect = 3e-60
Identities = 98/131 (74%), Positives = 109/131 (82%)
Frame = +1
Query: 221 FWSDPVFSTTFEKRKACYFNTGVMVMDLVKWRKKGYTERIERWMEIQKVERIYELGSLPP 280
FW+DP+ S F R+ CYFNTGVMVMDL KWR+ Y +IE WME+Q+ +RIYELGSLPP
Sbjct: 1 FWNDPLLSRVFNTREPCYFNTGVMVMDLAKWREGNYKRKIENWMELQRKKRIYELGSLPP 180
Query: 281 FLLVFAGHVAAIEHRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPWRRLDESKPCP 340
FLLVF G+V AI+HRWNQHGLGGDNV G CR LHPGPVSLLHWSG GKPW RLDE KPCP
Sbjct: 181 FLLVFGGNVEAIDHRWNQHGLGGDNVNGVCRSLHPGPVSLLHWSGKGKPWVRLDEKKPCP 360
Query: 341 LDALWEPFDLY 351
LD LWEP+DLY
Sbjct: 361 LDRLWEPYDLY 393
>TC231167 similar to UP|Q9FQZ3 (Q9FQZ3) Avr9/Cf-9 rapidly elicited protein
231 precursor, partial (39%)
Length = 723
Score = 218 bits (554), Expect = 4e-57
Identities = 94/139 (67%), Positives = 106/139 (75%)
Frame = +3
Query: 213 FTKYFTAAFWSDPVFSTTFEKRKACYFNTGVMVMDLVKWRKKGYTERIERWMEIQKVERI 272
F +Y FWS F F+ ++ CYFNTGVMVM LV+WR YT +IE+WMEIQK RI
Sbjct: 3 FXRYXXXXFWSSVXFXXVFQGKRPCYFNTGVMVMXLVRWRAGDYTRKIEKWMEIQKERRI 182
Query: 273 YELGSLPPFLLVFAGHVAAIEHRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPWRR 332
Y+LGSLPPFLL F G+V AIEHRWNQHGLGGDNV+ SCR LHPGPVSLLHWSG GKPW R
Sbjct: 183 YKLGSLPPFLLAFGGNVEAIEHRWNQHGLGGDNVRNSCRTLHPGPVSLLHWSGKGKPWTR 362
Query: 333 LDESKPCPLDALWEPFDLY 351
LD PC +D LW P+DLY
Sbjct: 363 LDAKMPCSVDFLWAPYDLY 419
>TC231166 similar to UP|Q9FQZ3 (Q9FQZ3) Avr9/Cf-9 rapidly elicited protein
231 precursor, partial (39%)
Length = 421
Score = 206 bits (525), Expect = 1e-53
Identities = 92/139 (66%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
Frame = +3
Query: 183 DLVLQDDIAKLWNTDL-GLNTIGAPQYCHANFTKYFTAAFWSDPVFSTTFEKRKACYFNT 241
D+++ DD+ +LW L G IGAP+YCHANFT+YF+ FWS FS F+ ++ CYFNT
Sbjct: 3 DVIVVDDVQELWKVSLTGSRVIGAPEYCHANFTRYFSYEFWSSAEFSEVFQGKRPCYFNT 182
Query: 242 GVMVMDLVKWRKKGYTERIERWMEIQKVERIYELGSLPPFLLVFAGHVAAIEHRWNQHGL 301
GVMVMDLV+WR YT +IE+WMEIQK RIY+LGSLPPFLL F G+V IEHRWNQHGL
Sbjct: 183 GVMVMDLVRWRAGDYTRKIEKWMEIQKERRIYKLGSLPPFLLAFGGNVEDIEHRWNQHGL 362
Query: 302 GGDNVKGSCRDLHPGPVSL 320
GGDNV+ SCR LHPGPVSL
Sbjct: 363 GGDNVRNSCRTLHPGPVSL 419
>TC226778 similar to GB|AAP68287.1|31711862|BT008848 At1g02720 {Arabidopsis
thaliana;} , partial (25%)
Length = 642
Score = 206 bits (523), Expect = 2e-53
Identities = 113/180 (62%), Positives = 134/180 (73%), Gaps = 4/180 (2%)
Frame = +2
Query: 1 MSSIIKFSRFFSAVMTV---IIISPSLHSSHYPALAIRSSIIHHIPHHDYRFYFHTSPFF 57
M I +FS FFSA M V +I+SPS S AIRSS +RF F +P F
Sbjct: 134 MLRITRFSGFFSAAMFVTVLVILSPSFQSE-----AIRSS---------HRFSFRKAPPF 271
Query: 58 RNADQCEPISREIGA-CHPSLVHVAITLDVEYLRGSIAAVHSILYHASCPENVFFHFLVT 116
RNA +C +S + C PSLVHVAITLDV+YLRGSIAAVHSIL+++ CPEN+FFHFLV+
Sbjct: 272 RNAAECASVSGQTTTVCDPSLVHVAITLDVDYLRGSIAAVHSILHNSLCPENIFFHFLVS 451
Query: 117 DTDLETLVRTTFPQLRFKVYYFDRNIVKNLISTSVRQALEQPLNYARNYLADLLESCVKR 176
DT+L+TLV +TFP L+F VYYFD NIV +LIS+SVRQALEQPLNYARNYL DLLESCV+R
Sbjct: 452 DTNLQTLVESTFPNLKFNVYYFDPNIVAHLISSSVRQALEQPLNYARNYLVDLLESCVER 631
>BE803604
Length = 538
Score = 193 bits (491), Expect = 9e-50
Identities = 97/179 (54%), Positives = 124/179 (69%)
Frame = +2
Query: 74 HPSLVHVAITLDVEYLRGSIAAVHSILYHASCPENVFFHFLVTDTDLETLVRTTFPQLRF 133
+P L HV ITLD LR I +HSIL H+ C +N+ + L + TDL ++ R+TFP L
Sbjct: 2 NPYLAHVDITLDD*SLRCCIRRLHSILQHSQCLQNMTYQLLGSQTDLTSIHRSTFP*LNL 181
Query: 134 KVYYFDRNIVKNLISTSVRQALEQPLNYARNYLADLLESCVKRVIYLDSDLVLQDDIAKL 193
K YYFD IV NL+ST RQAL+QPLNYARN L+DLL+ C +R IYLDS+L DDIAK
Sbjct: 182 KAYYFDPEIVPNLMSTCARQALQQPLNYARNDLSDLLQPCGERDIYLDSELAADDDIAKT 361
Query: 194 WNTDLGLNTIGAPQYCHANFTKYFTAAFWSDPVFSTTFEKRKACYFNTGVMVMDLVKWR 252
+T +IGAP+YCHA+FT+ +T FWSD +F+ + R CY +TGVMV+DLV WR
Sbjct: 362 RSTSSCSISIGAPEYCHAHFTRCYTETFWSDTLFARAYTGRMPCYLHTGVMVIDLVLWR 538
>BI893055 similar to GP|2194142|gb| ESTs gb|N38288 gb|T43486 gb|AA395242 come
from this gene. {Arabidopsis thaliana}, partial (36%)
Length = 426
Score = 178 bits (452), Expect = 3e-45
Identities = 88/142 (61%), Positives = 107/142 (74%), Gaps = 7/142 (4%)
Frame = +1
Query: 80 VAITLDVEYLRGSIAAVHSILYHASCPENVFFHFLVTDTD------LETLVRTTFPQLRF 133
+A+TLD YLRGSIAAVHS+L H+SCPENVFFHF+ + D L LVR+ FP L F
Sbjct: 1 IAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFIAAEFDPASPRVLTRLVRSIFPSLNF 180
Query: 134 KVYYFDRNIVKNLISTSVRQALEQPLNYARNYLADLLESCVKRVIYLDSDLVLQDDIAKL 193
KVY+F + V NLIS+S+RQALE PLNYARNYL D+L++CV RVIYLDSD+V+ DD+ KL
Sbjct: 181 KVYFFREDTVINLISSSIRQALENPLNYARNYLGDMLDTCVSRVIYLDSDVVVVDDVGKL 360
Query: 194 WNTDLGL-NTIGAPQYCHANFT 214
W + I AP+YCHANFT
Sbjct: 361 WRAAITHGRVIAAPEYCHANFT 426
>AW101289
Length = 412
Score = 174 bits (441), Expect = 6e-44
Identities = 86/135 (63%), Positives = 103/135 (75%), Gaps = 3/135 (2%)
Frame = +2
Query: 146 LISTSVRQALEQPLNYARNYLADLLESCVKRVIYLDSDLVLQDDIAKLWNTDLGLNT--- 202
LISTS+R AL+ PLNYARNYLA+LL SCV +++YLDSDLVL DDIAKL T LG N
Sbjct: 8 LISTSIRSALDCPLNYARNYLANLLPSCVLKIVYLDSDLVLVDDIAKLAATPLGDNNNTV 187
Query: 203 IGAPQYCHANFTKYFTAAFWSDPVFSTTFEKRKACYFNTGVMVMDLVKWRKKGYTERIER 262
+ AP+YC+ANF+ YFT +FWS+P S TF R CYFNTGVMV+ L +WR YT +I+
Sbjct: 188 LAAPEYCNANFSAYFTPSFWSNPSLSLTFAGRTPCYFNTGVMVIHLQRWRAGDYTTKIQE 367
Query: 263 WMEIQKVERIYELGS 277
WME+QK RIYELGS
Sbjct: 368 WMELQKRMRIYELGS 412
>AI416659
Length = 384
Score = 166 bits (420), Expect = 2e-41
Identities = 69/88 (78%), Positives = 79/88 (89%)
Frame = -2
Query: 263 WMEIQKVERIYELGSLPPFLLVFAGHVAAIEHRWNQHGLGGDNVKGSCRDLHPGPVSLLH 322
WME+QK RIYELGSLPPFLLVFAG++ +++HRWNQHGLGGDN +G CRDLHPGPVSLLH
Sbjct: 383 WMELQKRMRIYELGSLPPFLLVFAGNIVSVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLH 204
Query: 323 WSGSGKPWRRLDESKPCPLDALWEPFDL 350
WSG GKPW RLD ++PCPLDALW P+DL
Sbjct: 203 WSGKGKPWMRLDANRPCPLDALWAPYDL 120
>BQ610828 homologue to PIR|T00647|T006 glycosyl transferase homolog F3I6.10 -
Arabidopsis thaliana, partial (21%)
Length = 457
Score = 159 bits (403), Expect = 1e-39
Identities = 68/82 (82%), Positives = 74/82 (89%)
Frame = +2
Query: 270 ERIYELGSLPPFLLVFAGHVAAIEHRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKP 329
+RIYELGSLPPFLLVF G+V AI+HRWNQHGLGGDN+ G CR LHPGPVSLLHWSG GKP
Sbjct: 41 KRIYELGSLPPFLLVFGGNVEAIDHRWNQHGLGGDNLNGVCRSLHPGPVSLLHWSGKGKP 220
Query: 330 WRRLDESKPCPLDALWEPFDLY 351
W RLDE KPCPLD+LWEP+DLY
Sbjct: 221 WVRLDEKKPCPLDSLWEPYDLY 286
>TC232966 similar to PIR|T01514|T01514 glycosyl transferase homolog T10M13.14
- Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(23%)
Length = 556
Score = 158 bits (400), Expect = 3e-39
Identities = 68/77 (88%), Positives = 70/77 (90%)
Frame = +1
Query: 277 SLPPFLLVFAGHVAAIEHRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPWRRLDES 336
SLPPFLLVFAGHVA IEHRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPW RL
Sbjct: 1 SLPPFLLVFAGHVAPIEHRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPWIRLSSK 180
Query: 337 KPCPLDALWEPFDLYGH 353
+PCPLD+LW PFDLY H
Sbjct: 181 RPCPLDSLWAPFDLYAH 231
>BQ133883 similar to GP|4835227|emb glycosyltransferase-like protein
{Arabidopsis thaliana}, partial (32%)
Length = 422
Score = 158 bits (400), Expect = 3e-39
Identities = 78/139 (56%), Positives = 98/139 (70%), Gaps = 8/139 (5%)
Frame = +1
Query: 95 AVHSILYHASCPENVFFHFLVTDTD------LETLVRTTFPQLRFKVYYFDRNIVKNLIS 148
A+ S+L H+SCP+N FFHF+ + D L + TFP L F++Y F +V LIS
Sbjct: 1 AILSVLQHSSCPQNTFFHFVCSSNDNTNASLLRATISNTFPYLNFQLYPFHDAVVSGLIS 180
Query: 149 TSVRQALEQPLNYARNYLADLLESCVKRVIYLDSDLVLQDDIAKLWNTDLG--LNTIGAP 206
TS+R AL+ PLNYAR+YLA+L+ CVKRV+YLDSDLVL DDIAKL T LG N + AP
Sbjct: 181 TSIRSALDCPLNYARSYLANLIPPCVKRVVYLDSDLVLVDDIAKLATTSLGENNNVLAAP 360
Query: 207 QYCHANFTKYFTAAFWSDP 225
+YC+ANFT YFT FWS+P
Sbjct: 361 EYCNANFTSYFTPTFWSNP 417
>BM528328 homologue to GP|28372866|gb At3g06260 {Arabidopsis thaliana},
partial (62%)
Length = 425
Score = 157 bits (396), Expect = 9e-39
Identities = 66/100 (66%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
Frame = +3
Query: 259 RIERWMEIQKVE-RIYELGSLPPFLLVFAGHVAAIEHRWNQHGLGGDNVKGSCRDLHPGP 317
++E WM +QK + RIY LGSLPPFLLV AG++ A++HRWNQHGLGGDN +G CR LHPGP
Sbjct: 3 KVEEWMAVQKQQKRIYHLGSLPPFLLVLAGNIKAVDHRWNQHGLGGDNFEGKCRSLHPGP 182
Query: 318 VSLLHWSGSGKPWRRLDESKPCPLDALWEPFDLYGHRRRY 357
+SLLHWSG GKPW RLD KPC +D LW P+DLY R +
Sbjct: 183 ISLLHWSGKGKPWLRLDSRKPCIVDHLWAPYDLYRSSRHF 302
>BG790410
Length = 399
Score = 155 bits (393), Expect = 2e-38
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = -2
Query: 272 IYELGSLPPFLLVFAGHVAAIEHRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPWR 331
IYELGSLPPFLLVFAG V +EHRWNQHGLGGDN++G CRDLHPGPVSLLHWSG GKPW
Sbjct: 398 IYELGSLPPFLLVFAGDVERVEHRWNQHGLGGDNLEGLCRDLHPGPVSLLHWSGKGKPWL 219
Query: 332 RLDESKPCPLDALWEPFDLYGH 353
R+D KPCPLD+LW P+DL+ H
Sbjct: 218 RIDSKKPCPLDSLWAPYDLFRH 153
>TC221952 homologue to UP|Q8LF94 (Q8LF94) Avr9/Cf-9 rapidly elicited protein
231, partial (26%)
Length = 511
Score = 154 bits (390), Expect = 5e-38
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +2
Query: 271 RIYELGSLPPFLLVFAGHVAAIEHRWNQHGLGGDNVKGSCRDLHPGPVSLLHWSGSGKPW 330
RIYELGSLPPFLLVFAG++ ++HRWNQHGLGGDN +G CRDLHPGPVSLLHWSG GKPW
Sbjct: 11 RIYELGSLPPFLLVFAGNIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPW 190
Query: 331 RRLDESKPCPLDALWEPFDL 350
RLD ++PCPLDALW P+DL
Sbjct: 191 ARLDANRPCPLDALWAPYDL 250
>BQ630026 similar to GP|2194142|gb| ESTs gb|N38288 gb|T43486 gb|AA395242 come
from this gene. {Arabidopsis thaliana}, partial (26%)
Length = 351
Score = 138 bits (348), Expect = 3e-33
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +3
Query: 120 LETLVRTTFPQLRFKVYYFDRNIVKNLISTSVRQALEQPLNYARNYLADLLESCVKRVIY 179
L LV + FP L FKVY F + V NLIS+S+RQALE PLNYARNYL D+L++CV RVIY
Sbjct: 33 LTRLVGSIFPSLNFKVYIFREDTVINLISSSIRQALENPLNYARNYLGDMLDACVSRVIY 212
Query: 180 LDSDLVLQDDIAKLWNTDLGL-NTIGAPQYCHANFTKYFTAAFWSD 224
LDSD+V+ DD+ KLW + I AP+YCHANFTKYFT FW+D
Sbjct: 213 LDSDVVVVDDVGKLWRAPITRERVIAAPEYCHANFTKYFTDEFWND 350
>TC210585 similar to UP|Q9FX71 (Q9FX71) T6J4.1 protein, partial (30%)
Length = 440
Score = 119 bits (299), Expect = 2e-27
Identities = 59/118 (50%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Frame = +3
Query: 51 FHTSPFFRNADQCEPISREIGACHPSLVHVAITLDVEYLRGSIAAVHSILYHASCPENVF 110
F +P FRN +C +R S++H+A+TLD YLRGS+A V S+L HASCPEN+
Sbjct: 102 FREAPAFRNGRECRNRARS-----DSVIHIAMTLDATYLRGSVAGVFSVLRHASCPENIV 266
Query: 111 FHFLVT---DTDLETLVRTTFPQLRFKVYYFDRNIVKNLISTSVRQALEQPLNYARNY 165
FHF+ T T+L ++ TFP L F +Y FD N+V+ IS S+R+AL+QPLNYAR Y
Sbjct: 267 FHFIGTTRRSTELRRIITATFPYLAFYLYQFDANLVRGKISYSIRRALDQPLNYARMY 440
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.326 0.140 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,399,660
Number of Sequences: 63676
Number of extensions: 349244
Number of successful extensions: 2490
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 2406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2461
length of query: 360
length of database: 12,639,632
effective HSP length: 98
effective length of query: 262
effective length of database: 6,399,384
effective search space: 1676638608
effective search space used: 1676638608
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC145329.11