BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145222.13 + phase: 0
(411 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC229715 221 6e-58
TC232417 164 5e-41
TC210222 homologue to UP|Q6T2Z8 (Q6T2Z8) Cyclin-dependent kinase... 35 0.047
TC214474 homologue to UP|CDC2_VIGAC (Q41639) Cell division contr... 35 0.061
TC222220 weakly similar to UP|Q9ZP16 (Q9ZP16) Receptor-like prot... 35 0.080
TC227247 UP|Q6T2Z8 (Q6T2Z8) Cyclin-dependent kinases CDKB, complete 34 0.14
TC214549 homologue to UP|O82135 (O82135) Cdc2, complete 33 0.30
BU577397 33 0.30
TC218941 weakly similar to UP|O65470 (O65470) Serine/threonine k... 32 0.52
TC209989 similar to UP|Q9XED4 (Q9XED4) Receptor-like protein kin... 32 0.68
TC226920 weakly similar to UP|Q9LPQ3 (Q9LPQ3) F15H18.14, partial... 31 1.2
TC231396 similar to UP|Q9FGQ5 (Q9FGQ5) Receptor-like protein kin... 31 1.2
TC226922 similar to UP|Q9LPQ3 (Q9LPQ3) F15H18.14, partial (54%) 30 1.5
TC230014 similar to GB|AAP21294.1|30102752|BT006486 At5g49760 {A... 29 3.4
TC217441 homologue to GB|AAK68074.1|14573459|AF384970 somatic em... 29 4.4
BU964840 29 4.4
TC234773 similar to PIR|T02154|T02154 protein kinase homolog T1F... 29 4.4
TC209776 similar to UP|O65470 (O65470) Serine/threonine kinase-l... 28 5.7
TC212274 similar to PIR|T05754|T05754 S-receptor kinase M4I22.1... 28 7.5
TC206120 similar to UP|Q941F6 (Q941F6) Leucine-rich repeat recep... 28 7.5
>TC229715
Length = 661
Score = 221 bits (562), Expect = 6e-58
Identities = 106/121 (87%), Positives = 114/121 (93%)
Frame = +1
Query: 291 WARASAASAFTYLEKRAFGIADDIYEAGLLFAYLAFVPFCEAGVMDGLSLQRLLENTFRL 350
W RA+ A AFT +EKRAFGIADDIYEAGL FAY+AFVPFCEAGVMD LSLQRLLENTF+L
Sbjct: 1 WRRATGAGAFTQMEKRAFGIADDIYEAGLFFAYMAFVPFCEAGVMDSLSLQRLLENTFQL 180
Query: 351 DLEATREYCIADDKLVNAIEFLDLGDGAGWELLQAMLNADFRKRPTAEAVLSHRFMTGEV 410
DLEATREYC+ADD+LVNA+EFLDLGDGAGWELLQAMLNADFRKRPTAEAVL+HRFMTG V
Sbjct: 181 DLEATREYCLADDRLVNAVEFLDLGDGAGWELLQAMLNADFRKRPTAEAVLNHRFMTGAV 360
Query: 411 L 411
L
Sbjct: 361 L 363
>TC232417
Length = 564
Score = 164 bits (416), Expect = 5e-41
Identities = 87/122 (71%), Positives = 98/122 (80%), Gaps = 8/122 (6%)
Frame = +3
Query: 55 IKFITNSDWFQVGRPIGNYGFMNVTTSST------DQYSLG--GGLKTQDVQEGSVKIRL 106
+ F TNSD FQVGRPIG YGF+NVT+ S YSL GGLKTQDV EG+VKIRL
Sbjct: 198 LPFFTNSDSFQVGRPIGTYGFINVTSYSAFPSGPGTDYSLEDLGGLKTQDVGEGNVKIRL 377
Query: 107 YEGRVSQGPLKQTPVLFKVYPGTRAGGVVADMMAANELNSHMFLQSSSKGISQHLMLLLG 166
YEGRVS+GPL TPV FKVYPG RAGGVVAD +AANELN+H+FLQSSSKGI Q+L+LL+G
Sbjct: 378 YEGRVSRGPLTGTPVTFKVYPGRRAGGVVADALAANELNTHLFLQSSSKGIGQNLVLLVG 557
Query: 167 GF 168
GF
Sbjct: 558 GF 563
>TC210222 homologue to UP|Q6T2Z8 (Q6T2Z8) Cyclin-dependent kinases CDKB,
partial (60%)
Length = 781
Score = 35.4 bits (80), Expect = 0.047
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 15/198 (7%)
Frame = +1
Query: 223 LLQGALRGLAYMHDHDRLHQSLGPFSVSLNTISESEAPYLIPRLRDL----AFSVSVRYS 278
L+ +G+A+ H H LH+ L P ++ + + ++ ++ DL AF+V ++
Sbjct: 1 LMYQLCKGIAFCHGHGILHRDLKPHNLLM------DRKTMMLKIADLGLARAFTVPIKKY 162
Query: 279 ELEDSGPLTEGLWARASAASAFTYLEKRAFGIADDIYEAGLLFAYLAFVPFCEAGVMDGL 338
E LT LW RA L + +A DI+ G +FA L AG +
Sbjct: 163 THE---ILT--LWYRAPE----VLLGATHYSMAVDIWSVGCIFAELVTKQALFAGDSE-- 309
Query: 339 SLQRLLENTFRLDLEATREYCIADDKLVNAIEFLDLG-----------DGAGWELLQAML 387
LQ+LL + FRL E KL + E+ D G +LL ML
Sbjct: 310 -LQQLL-HIFRLLGTPNEEVWPGVSKLKDWHEYPQWNPKSLSTAVPGLDELGLDLLSQML 483
Query: 388 NADFRKRPTAEAVLSHRF 405
+ KR +A+ + H +
Sbjct: 484 KYEPSKRISAKKAMEHAY 537
>TC214474 homologue to UP|CDC2_VIGAC (Q41639) Cell division control protein 2
homolog (p34cdc2) , complete
Length = 1204
Score = 35.0 bits (79), Expect = 0.061
Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 15/203 (7%)
Frame = +2
Query: 218 RFIIKLLQGALRGLAYMHDHDRLHQSLGPFSVSLN--TISESEAPYLIPRLRDLAFSVSV 275
R + L L G+AY H H LH+ L P ++ ++ T S A + + R AF + V
Sbjct: 383 RQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLAR----AFGIPV 550
Query: 276 RYSELEDSGPLTEGLWARASAASAFTYLEKRAFGIADDIYEAGLLFAYLA----FVPFCE 331
R E LW RA L R + D++ G +FA + P +
Sbjct: 551 RTFTHE-----VVTLWYRAPE----ILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFP-GD 700
Query: 332 AGVMDGLSLQRLLEN---------TFRLDLEATREYCIADDKLVNAIEFLDLGDGAGWEL 382
+ + + + R+L T D ++T + D L N + L D AG L
Sbjct: 701 SEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPKWPSKD-LANVVPNL---DAAGLNL 868
Query: 383 LQAMLNADFRKRPTAEAVLSHRF 405
L +ML D KR TA + + H +
Sbjct: 869 LSSMLCLDPSKRITARSAVEHEY 937
>TC222220 weakly similar to UP|Q9ZP16 (Q9ZP16) Receptor-like protein kinase,
RLK3 precursor, partial (35%)
Length = 1304
Score = 34.7 bits (78), Expect = 0.080
Identities = 52/222 (23%), Positives = 96/222 (42%), Gaps = 8/222 (3%)
Frame = +3
Query: 107 YEGRVSQGPLKQTPVLFK-VYPGTRAGGVV----ADMMAANELNSHMFLQSSSKGISQHL 161
YE R+ +G V++K V P R V + ANE + + L + + ++L
Sbjct: 231 YEKRIGEGGFG---VVYKGVLPDGREIAVKKLSKSSGQGANEFKNEILLIAKLQ--HRNL 395
Query: 162 MLLLGGFETTTGEQWLAFRDYGKSTAADYAKVASEKVSKLSSWNSFERGQSMKRRRRFII 221
+ LLG F E+ L + ++ + + DY S + SK +W+ ER
Sbjct: 396 VTLLG-FCLEEHEKMLIY-EFVSNKSLDYFLFDSHR-SKQLNWS--ER-----------Y 527
Query: 222 KLLQGALRGLAYMHDHDRL---HQSLGPFSVSLNTISESEAPYLIPRLRDLAFSVSVRYS 278
K+++G +G++Y+H+H RL H+ L P +V L++ + P++ D + V
Sbjct: 528 KIIEGIAQGISYLHEHSRLKVIHRDLKPSNVLLDS-------NMNPKISDFGMARIVAID 686
Query: 279 ELEDSGPLTEGLWARASAASAFTYLEKRAFGIADDIYEAGLL 320
+L+ G + S Y F D++ G++
Sbjct: 687 QLQGKTNRIVGTYGYMSP----EYAMHGQFSEKSDVFSFGVI 800
>TC227247 UP|Q6T2Z8 (Q6T2Z8) Cyclin-dependent kinases CDKB, complete
Length = 1235
Score = 33.9 bits (76), Expect = 0.14
Identities = 49/199 (24%), Positives = 82/199 (40%), Gaps = 15/199 (7%)
Frame = +2
Query: 220 IIKLLQGALRGLAYMHDHDRLHQSLGPFSVSLNTISESEAPYLIPRLRDL----AFSVSV 275
I L+ +G+A+ H H LH+ L P ++ + + ++ ++ DL AF+V +
Sbjct: 401 IKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM------DPKTMMLKIADLGLARAFTVPI 562
Query: 276 RYSELEDSGPLTEGLWARASAASAFTYLEKRAFGIADDIYEAGLLFAYLAFVPFCEAGVM 335
+ E LT LW RA L + +A D++ G +FA L + +
Sbjct: 563 KKYTHE---ILT--LWYRAPE----VLLGATHYSMAVDMWSVGCIFAELV----TKQALF 703
Query: 336 DGLSLQRLLENTFRLDLEATREYCIADDKLVNAIEFLDLG-----------DGAGWELLQ 384
G S + L + FRL + KL+N E+ D G +LL
Sbjct: 704 PGDSELQQLLHIFRLLGTPNEDVWPGVSKLMNWHEYPQWNPQSLSTAVPSLDELGLDLLS 883
Query: 385 AMLNADFRKRPTAEAVLSH 403
ML + KR +A+ + H
Sbjct: 884 QMLKYEPSKRISAKKAMEH 940
>TC214549 homologue to UP|O82135 (O82135) Cdc2, complete
Length = 1216
Score = 32.7 bits (73), Expect = 0.30
Identities = 54/205 (26%), Positives = 80/205 (38%), Gaps = 17/205 (8%)
Frame = +3
Query: 218 RFIIKLLQGALRGLAYMHDHDRLHQSLGP--FSVSLNTISESEAPYLIPRLRDLAFSVSV 275
R + L L G+AY H H LH+ L P + +T + A + + R AF + V
Sbjct: 459 RQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSTNALKLADFGLAR----AFGIPV 626
Query: 276 RYSELEDSGPLTEGLWARASAASAFTYLEKRAFGIADDIYEAGLLFAYLAFVPFCEAGVM 335
R E LW RA L R + DI+ G +FA + + +
Sbjct: 627 RTFTHE-----VVTLWYRAPE----ILLGSRQYSTPVDIWSVGCIFAEMV----NQRPLF 767
Query: 336 DGLSLQRLLENTFRL----------DLEATREYCIADDK-----LVNAIEFLDLGDGAGW 380
G S L FR+ + + ++ A K L N + L + AG
Sbjct: 768 PGDSEIDELFKIFRIMGTPNEDTWPGVTSLPDFKSAFPKWQPKDLKNVVPNL---EPAGL 938
Query: 381 ELLQAMLNADFRKRPTAEAVLSHRF 405
+LL +ML D KR TA + L H +
Sbjct: 939 DLLSSMLYLDPSKRITARSALEHEY 1013
>BU577397
Length = 409
Score = 32.7 bits (73), Expect = 0.30
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = +3
Query: 222 KLLQGALRGLAYMHDHDRL---HQSLGPFSVSLN 252
K+++G RG+ Y+H+H RL H+ L P ++ L+
Sbjct: 216 KIIEGTARGILYLHEHSRLKVIHRDLKPSNILLD 317
>TC218941 weakly similar to UP|O65470 (O65470) Serine/threonine kinase-like
protein , partial (34%)
Length = 1537
Score = 32.0 bits (71), Expect = 0.52
Identities = 26/119 (21%), Positives = 50/119 (41%), Gaps = 3/119 (2%)
Frame = +3
Query: 205 NSFERGQSMKRRRRFIIKLLQGALRGLAYMHDHDRL---HQSLGPFSVSLNTISESEAPY 261
N+F Q K ++ G +G+ Y+H+H RL H+ L P +V L+
Sbjct: 249 NNFADSQPQKLSWSERYNIIGGIAQGILYLHEHSRLKVIHRDLKPSNVLLDEC------- 407
Query: 262 LIPRLRDLAFSVSVRYSELEDSGPLTEGLWARASAASAFTYLEKRAFGIADDIYEAGLL 320
+IP++ D + V ++ + + + G + S Y F D++ G++
Sbjct: 408 MIPKISDFGLARIVEINQDKGNTSVIVGTYGYMSP----EYAMFGQFSEKSDVFSFGVM 572
>TC209989 similar to UP|Q9XED4 (Q9XED4) Receptor-like protein kinase homolog
RK20-1, partial (32%)
Length = 738
Score = 31.6 bits (70), Expect = 0.68
Identities = 24/99 (24%), Positives = 44/99 (44%)
Frame = +3
Query: 222 KLLQGALRGLAYMHDHDRLHQSLGPFSVSLNTISESEAPYLIPRLRDLAFSVSVRYSELE 281
K+++G RGL Y+H+ RL+ S N + + E L P++ D + ++ E
Sbjct: 438 KIIRGIARGLLYLHEDSRLNVVHRDLKTS-NILLDGE---LNPKISDFGMARLFEINQTE 605
Query: 282 DSGPLTEGLWARASAASAFTYLEKRAFGIADDIYEAGLL 320
S G + A Y++ F I D++ G++
Sbjct: 606 ASTTTIVGTF----GYMAPEYIKHGQFSIKSDVFSFGVM 710
>TC226920 weakly similar to UP|Q9LPQ3 (Q9LPQ3) F15H18.14, partial (49%)
Length = 722
Score = 30.8 bits (68), Expect = 1.2
Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 12/126 (9%)
Frame = +2
Query: 220 IIKLLQGALRGLAYMHDHDRLHQSLGPFSVSLNTISESEAPYLIPRLRDLAFSVSVRYSE 279
+ K+ + L GLAY+H + H+ + P ++ +N+ E V+ ++
Sbjct: 59 LAKVARDVLEGLAYLHARNIAHRDIKPANILVNSEGE------------------VKIAD 184
Query: 280 LEDSGPLTEGLWARASAASAFTYLEKRAF----------GIADDIYEAGLLF--AYLAFV 327
S + L A S Y+ F G A DI+ GL Y+
Sbjct: 185 FGVSKLMCRTLEACNSYVGTCAYMSPDRFDPEAYGGNYNGFAADIWSLGLTLFELYVGHF 364
Query: 328 PFCEAG 333
PF +AG
Sbjct: 365 PFLQAG 382
>TC231396 similar to UP|Q9FGQ5 (Q9FGQ5) Receptor-like protein kinase
(At5g67280/K3G17_4), partial (29%)
Length = 832
Score = 30.8 bits (68), Expect = 1.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 221 IKLLQGALRGLAYMHDHDRLHQSLGPFSVSLNTISE 256
+K+ +G RGL Y+H+ +H +L P ++ L E
Sbjct: 98 LKIAKGVARGLTYLHEKKHVHGNLKPSNILLGNDME 205
>TC226922 similar to UP|Q9LPQ3 (Q9LPQ3) F15H18.14, partial (54%)
Length = 1190
Score = 30.4 bits (67), Expect = 1.5
Identities = 28/126 (22%), Positives = 48/126 (37%), Gaps = 12/126 (9%)
Frame = +1
Query: 220 IIKLLQGALRGLAYMHDHDRLHQSLGPFSVSLNTISESEAPYLIPRLRDLAFSVSVRYSE 279
+ K+ + L GLAY+H + H+ + P ++ +N+ + V+ ++
Sbjct: 517 LAKVARDVLEGLAYLHARNIAHRDIKPANILVNSEGD------------------VKIAD 642
Query: 280 LEDSGPLTEGLWARASAASAFTYLEKRAF----------GIADDIYEAGLLF--AYLAFV 327
S + L A S Y+ F G A DI+ GL Y+
Sbjct: 643 FGVSKLMCRSLEACNSYVGTCAYMSPDRFDPEAYGGNYNGFAADIWSLGLTLFELYVGHF 822
Query: 328 PFCEAG 333
PF +AG
Sbjct: 823 PFLQAG 840
>TC230014 similar to GB|AAP21294.1|30102752|BT006486 At5g49760 {Arabidopsis
thaliana;} , partial (29%)
Length = 1087
Score = 29.3 bits (64), Expect = 3.4
Identities = 35/118 (29%), Positives = 50/118 (41%), Gaps = 5/118 (4%)
Frame = +3
Query: 124 KVYPGTRAGG-VVADMMAANE-LNSHMFLQSSSKGISQ-HLMLLLG--GFETTTGEQWLA 178
KVY GT G +VA AA E + + ++ + +S+ H L+G GF GEQ L
Sbjct: 3 KVYQGTLPSGELVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVGLVGFCFEKGEQMLV 182
Query: 179 FRDYGKSTAADYAKVASEKVSKLSSWNSFERGQSMKRRRRFIIKLLQGALRGLAYMHD 236
+ T D K W + R +K+ GA RGLAY+H+
Sbjct: 183 YEHIPNGTLMDSLS------GKSGIWMDWIRR----------LKVALGAARGLAYLHE 308
>TC217441 homologue to GB|AAK68074.1|14573459|AF384970 somatic embryogenesis
receptor-like kinase 3 {Arabidopsis thaliana;} , partial
(54%)
Length = 1008
Score = 28.9 bits (63), Expect = 4.4
Identities = 32/120 (26%), Positives = 48/120 (39%), Gaps = 6/120 (5%)
Frame = +2
Query: 124 KVYPGTRAGGVVADMMAANELNSH---MFLQSSSKGISQHL---MLLLGGFETTTGEQWL 177
KVY G A G + + E + + Q+ + IS + +L L GF T E+ L
Sbjct: 194 KVYKGRLADGSLVAVKRLKEERTQGG*LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 373
Query: 178 AFRDYGKSTAADYAKVASEKVSKLSSWNSFERGQSMKRRRRFIIKLLQGALRGLAYMHDH 237
+ + A + E L W R+R + G+ RGLAY+HDH
Sbjct: 374 VYPYMANGSVASCLRERQESQPPLG-W---------PERKRIAL----GSARGLAYLHDH 511
>BU964840
Length = 454
Score = 28.9 bits (63), Expect = 4.4
Identities = 28/115 (24%), Positives = 50/115 (43%)
Frame = +3
Query: 210 GQSMKRRRRFIIKLLQGALRGLAYMHDHDRLHQSLGPFSVSLNTISESEAPYLIPRLRDL 269
G+ M RRF I + GA +GLAY+H HD + + S N + + E +PR+ D
Sbjct: 39 GELMDWPRRFAIAV--GAAQGLAYLH-HDSVPAIVHRDVKSNNILLDYE---FVPRVADF 200
Query: 270 AFSVSVRYSELEDSGPLTEGLWARASAASAFTYLEKRAFGIADDIYEAGLLFAYL 324
+ +++ + + G + + A+T D+Y G++ L
Sbjct: 201 GLAKTLQREATQGAMSRVAGSYGYIAPEYAYTMKVTE----KSDVYSFGVVLMEL 353
>TC234773 similar to PIR|T02154|T02154 protein kinase homolog T1F15.2 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(21%)
Length = 465
Score = 28.9 bits (63), Expect = 4.4
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +1
Query: 221 IKLLQGALRGLAYMHD---HDRLHQSLGPFSVSLNT 253
+K+++GA RGLAY+H+ +H + P ++ L+T
Sbjct: 358 LKIIKGAARGLAYLHECSPRKFVHGDIKPSNLLLDT 465
>TC209776 similar to UP|O65470 (O65470) Serine/threonine kinase-like protein
, partial (47%)
Length = 1305
Score = 28.5 bits (62), Expect = 5.7
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 208 ERGQSMKRRRRFIIKLLQGALRGLAYMHDHDRL---HQSLGPFSVSLN 252
E+ +S+ RR+ K+++G RG+ Y+H+ RL H+ L +V L+
Sbjct: 347 EKQKSLDWTRRY--KIVEGIARGIQYLHEDSRLKIIHRDLKASNVLLD 484
>TC212274 similar to PIR|T05754|T05754 S-receptor kinase M4I22.110 precursor
- Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (20%)
Length = 553
Score = 28.1 bits (61), Expect = 7.5
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Frame = +2
Query: 207 FERGQSMKRRRRFIIKLLQGALRGLAYMHD---HDRLHQSLGPFSVSLNTISESEAPYLI 263
F+ +SM R ++ G RGL Y+H H +H+ L +V L++ +
Sbjct: 113 FDENKSMLLDRPTRSLIINGVARGLLYLHQDSRHTIVHRDLKAGNVLLDS-------EMN 271
Query: 264 PRLRDLAFSVSVRYSELEDSGPLTEGLWARASAASAFTYLEKRAFGIADDIYEAGLL 320
P++ D + S +E+E + G + Y+ A+ D++ G+L
Sbjct: 272 PKISDSGLARSFGGNEIEATTKHVVGTYGYLPP----EYIIDGAYSTKSDVFSFGVL 430
>TC206120 similar to UP|Q941F6 (Q941F6) Leucine-rich repeat receptor-like
kinase F21M12.36, partial (18%)
Length = 1037
Score = 28.1 bits (61), Expect = 7.5
Identities = 27/143 (18%), Positives = 59/143 (40%), Gaps = 4/143 (2%)
Frame = +3
Query: 186 TAADYAKVASEKVSKLSSWNSFERGQSMKRRRRFIIKLLQGALRGLAYMH---DHDRLHQ 242
T+ D + + E + S W+ + M+ ++ GA +GL Y+H + +H+
Sbjct: 51 TSEDSSLLVYEYLPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCEKPVIHR 230
Query: 243 SLGPFSVSLNTISESEAPYLIPRLRDLAFSVSVRYSELEDSGP-LTEGLWARASAASAFT 301
+ ++ L+ +L PR+ D + ++ + ++DS + G + +T
Sbjct: 231 DVKSSNILLD-------EFLKPRIADFGLAKVIQANVVKDSSTHVIAGTHGYIAPEYGYT 389
Query: 302 YLEKRAFGIADDIYEAGLLFAYL 324
Y D+Y G++ L
Sbjct: 390 YKVNE----KSDVYSFGVVLMEL 446
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,545,315
Number of Sequences: 63676
Number of extensions: 186501
Number of successful extensions: 1076
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of query: 411
length of database: 12,639,632
effective HSP length: 100
effective length of query: 311
effective length of database: 6,272,032
effective search space: 1950601952
effective search space used: 1950601952
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Medicago: description of AC145222.13