TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145218.1 - phase: 0 
         (63 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC222864 similar to GB|AAO64841.1|29028924|BT005906 At5g63450 {A...    55  5e-09
CK769142                                                               54  2e-08
BG043108                                                               49  7e-07

>TC222864 similar to GB|AAO64841.1|29028924|BT005906 At5g63450 {Arabidopsis
           thaliana;} , partial (11%)
          Length = 570

 Score = 55.5 bits (132), Expect = 5e-09
 Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
 Frame = +1

Query: 1   MASLELTSVTVRSYALEIINEEIHTRLIPFMFSFARDEK----IFDLRD 45
           MASLEL SV +R+YA+E++NEEIH RLIP M S AR E     + DL+D
Sbjct: 424 MASLELGSVAIRTYAMELVNEEIHARLIPIMESTARGELNSVCVLDLQD 570


>CK769142 
          Length = 753

 Score = 53.5 bits (127), Expect = 2e-08
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
 Frame = +2

Query: 1   MASLELTSVTVRSYALEIINEEIHTRLIPF-MFSFARDEK-----IFDLRDIMRSSS 51
           MASLEL SV +R+ A+E++NEEIH RLIPF M S   DE      + DL+DI+R  S
Sbjct: 488 MASLELGSVAIRTNAMELVNEEIHARLIPFIMGSVTHDELNDSVCVLDLQDILRRFS 658


>BG043108 
          Length = 451

 Score = 48.5 bits (114), Expect = 7e-07
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +2

Query: 1   MASLELTSVTVRSYALEIINEEIHTRLIPFMFS 33
           MASLEL  V +R+YA+E++N+EIHTRLIP M S
Sbjct: 353 MASLELCGVAMRTYAMELVNKEIHTRLIPIMES 451


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.325    0.135    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,802,031
Number of Sequences: 63676
Number of extensions: 13559
Number of successful extensions: 88
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of query: 63
length of database: 12,639,632
effective HSP length: 39
effective length of query: 24
effective length of database: 10,156,268
effective search space: 243750432
effective search space used: 243750432
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)