BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145202.1 - phase: 0
(383 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215604 similar to UP|Q84WL6 (Q84WL6) At3g23090, partial (44%) 503 e-143
TC215603 similar to UP|Q7XYW3 (Q7XYW3) Seed specific protein Bn1... 192 2e-49
TC228180 similar to UP|Q9SR11 (Q9SR11) F7O18.11 protein, partial... 182 2e-46
TC205939 weakly similar to UP|Q761Z8 (Q761Z8) BRI1-KD interactin... 181 6e-46
TC217190 similar to UP|Q761Z6 (Q761Z6) BRI1-KD interacting prote... 143 1e-34
TC217093 130 1e-30
TC215601 similar to UP|Q7XYW3 (Q7XYW3) Seed specific protein Bn1... 117 9e-27
TC215602 weakly similar to UP|Q84WL6 (Q84WL6) At3g23090, partial... 94 1e-19
CA953137 similar to GP|27765054|gb| At3g23090 {Arabidopsis thali... 79 3e-15
BE608412 79 4e-15
TC205940 similar to UP|Q761Z8 (Q761Z8) BRI1-KD interacting prote... 77 2e-14
TC209230 75 4e-14
TC209231 similar to UP|Q761Z6 (Q761Z6) BRI1-KD interacting prote... 75 5e-14
BM519528 65 5e-11
BI321564 weakly similar to GP|28453880|gb| WAVE-DAMPENED2 {Arabi... 62 4e-10
TC230825 similar to UP|O48683 (O48683) F3I6.9 protein, partial (... 44 1e-04
TC230922 39 0.004
BU547048 PIR|S41689|S41 cytochrome-c oxidase (EC 1.9.3.1) chain ... 38 0.007
BQ298040 38 0.007
TC227495 similar to UP|P93273 (P93273) PAFD103 protein (Fragment... 38 0.009
>TC215604 similar to UP|Q84WL6 (Q84WL6) At3g23090, partial (44%)
Length = 1145
Score = 503 bits (1294), Expect = e-143
Identities = 251/330 (76%), Positives = 282/330 (85%), Gaps = 14/330 (4%)
Frame = +2
Query: 1 MGIEDSDICIIKEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTK 60
MG+ED+DICIIKEPD VVVYSDGIS DSGHE G+D+HN+TESYE INETTEHHSSEES K
Sbjct: 155 MGVEDTDICIIKEPDHVVVYSDGISHDSGHEAGSDHHNITESYEQINETTEHHSSEESAK 334
Query: 61 EYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDT----- 115
EYEVKECTTE+SVK DVSN++K E+KLT D EGVL+ KS K HKTR HKPRDT
Sbjct: 335 EYEVKECTTEISVKVSDVSNVKKCEDKLTSDSEGVLSEKSFKSHKTRCKHKPRDTGKNGS 514
Query: 116 ---------VKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQ 166
++PTVP+PFSLATE+RA+I TRP FEEDNKG + RKS+NKKNVLS N KQ
Sbjct: 515 RPPVTGSAQIRPTVPQPFSLATEKRASIATRPAFEEDNKGSNERKSLNKKNVLSPNLFKQ 694
Query: 167 NQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQR 226
NQLK+P+V RKPL+PDNKKH D+DDSCSVAS TA SV+S KSR TVASAP FRST+RA++
Sbjct: 695 NQLKSPVVSRKPLQPDNKKHPDDDDSCSVASITAASVRSIKSRTTVASAPVFRSTQRAEK 874
Query: 227 RKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKV 286
RKEFY+KLEEKQQAMEAEKNQ+EAR+KEE EEAIKQLR+SL FKASPMPSFYHEGPPPKV
Sbjct: 875 RKEFYTKLEEKQQAMEAEKNQSEARTKEEMEEAIKQLRKSLTFKASPMPSFYHEGPPPKV 1054
Query: 287 DLKKLPPTRAKSPKLGRRKSNSGAVYSSEG 316
+LKKLP TRAKSPKLGRRKSN+GAV SEG
Sbjct: 1055ELKKLPATRAKSPKLGRRKSNNGAVNLSEG 1144
>TC215603 similar to UP|Q7XYW3 (Q7XYW3) Seed specific protein Bn15D14A
(Fragment), partial (29%)
Length = 663
Score = 192 bits (488), Expect = 2e-49
Identities = 104/156 (66%), Positives = 118/156 (74%)
Frame = +3
Query: 228 KEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVD 287
KE KLEEKQQAMEAEKNQ+EAR+KEE EEAIKQLR+SL FKASPMPSFYHEGPPPKV+
Sbjct: 3 KEXXXKLEEKQQAMEAEKNQSEARTKEEMEEAIKQLRKSLTFKASPMPSFYHEGPPPKVE 182
Query: 288 LKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGAAAQRKHRTSNTNNCNLSDVTNGSGL 347
LKKLP TRAKSPKLGRRKSN+GAV SEG KEKGA +RKH T T+N NG
Sbjct: 183 LKKLPATRAKSPKLGRRKSNNGAVNLSEGDKEKGAGIRRKHHTLKTDNYGDKSDVNG--- 353
Query: 348 DGLMSKTENETEHTKLIEEINMIKANGQAGIEISSQ 383
+S +N+T+H IEEI+ + GQA +EI SQ
Sbjct: 354 ---LSDLKNKTKH---IEEIDATEVTGQADLEIGSQ 443
>TC228180 similar to UP|Q9SR11 (Q9SR11) F7O18.11 protein, partial (40%)
Length = 1690
Score = 182 bits (462), Expect = 2e-46
Identities = 124/323 (38%), Positives = 185/323 (56%), Gaps = 2/323 (0%)
Frame = +2
Query: 1 MGIEDSDICII-KEPDRVVVYSDGISQDSGHETGTDNHNMTESYEH-INETTEHHSSEES 58
MG E + + ++ K+P+ V+ S+G S D + ++ +H +NE T+ +S E
Sbjct: 269 MGREVTGMQVVDKKPNGVIPASNGSSNDKVCISPKRTAAKVQAKDHEVNECTKANSFVEK 448
Query: 59 TKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKP 118
++E +S KA + + EE + + + ++K P R H
Sbjct: 449 SQEK-----MDGLSAKATNCNTDLPEEEIEISEVQKMGDSKKLSPPAARKEHTSH----- 598
Query: 119 TVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKP 178
V P L TE+ + E D G + S N N+LS + K +Q +P RK
Sbjct: 599 LVTHPSDLVTEKHGSHTQIVDAEADATGLN--LSPNTNNMLSPISSKNSQPNSPFSSRKT 772
Query: 179 LKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQ 238
L+ D KK+ D++D+ S+AS +A S+++ +S+ T SAP+FR +ERA++R+EFY KLEEK
Sbjct: 773 LQHD-KKNYDDEDNWSIAS-SAMSMRTARSKVTHGSAPTFRCSERAEKRREFYLKLEEKH 946
Query: 239 QAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKS 298
+A+ EKNQ EAR KEE+E AIKQLR++L KA+P+PSFY+E PPPK +LKKLP TR KS
Sbjct: 947 RALREEKNQYEARFKEEQEAAIKQLRKNLVIKANPVPSFYYEAPPPKTELKKLPLTRPKS 1126
Query: 299 PKLGRRKSNSGAVYSSEGVKEKG 321
PKL RR+S A+ S V +G
Sbjct: 1127PKLSRRRSLGDALNPSPEVCSRG 1195
>TC205939 weakly similar to UP|Q761Z8 (Q761Z8) BRI1-KD interacting protein
116 (Fragment), partial (46%)
Length = 1434
Score = 181 bits (458), Expect = 6e-46
Identities = 121/326 (37%), Positives = 172/326 (52%), Gaps = 3/326 (0%)
Frame = +3
Query: 61 EYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTV 120
++E+KE + + ++ K E+ D N K + N K P+
Sbjct: 255 DHEIKE--------SAEANSFEKHHER--KDSLSAKNTKLNAGLPEEENEKSDQVPSPSA 404
Query: 121 PRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLK 180
P+P TE+ T E D G + N N+ S N+ K +Q +P PRK
Sbjct: 405 PQPSDQVTEKHVTHAQAVDTEADASGLNLSPKAN--NIHSPNSSKNSQPNSPFSPRK--- 569
Query: 181 PDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQA 240
+ D++D+ S AS + S ++ KS+ TV SAP+FR ++RA++R+EFY KLEEK +A
Sbjct: 570 ----SYHDDEDNWSAASSSVASARTAKSKVTVGSAPTFRCSDRAEKRREFYLKLEEKHRA 737
Query: 241 MEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPK 300
+E EKNQ EAR KEE++ AIKQLR++L KA P+PSFY+EGPPPK +LKKLP TR KSPK
Sbjct: 738 LEEEKNQYEARKKEEEDAAIKQLRKNLVVKAKPVPSFYYEGPPPKTELKKLPLTRPKSPK 917
Query: 301 LGRRKSNSGAVYSSEGVKEKGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENET-E 359
L RR+S A S + +G R +N + +L N + G S ++T E
Sbjct: 918 LSRRRSCGDAAGISPEISTRG----RHSVGNNPKHGSLVPPKNKDLVTGRNSNGSSKTKE 1085
Query: 360 HTKLIEEINMI--KANGQAGIEISSQ 383
KL +E K Q +IS Q
Sbjct: 1086RPKLDKETKTAPPKITEQTNADISVQ 1163
>TC217190 similar to UP|Q761Z6 (Q761Z6) BRI1-KD interacting protein 118
(Fragment), partial (32%)
Length = 1637
Score = 143 bits (361), Expect = 1e-34
Identities = 106/322 (32%), Positives = 161/322 (49%), Gaps = 8/322 (2%)
Frame = +2
Query: 31 ETGTDNHNMTESYEHINETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTP 90
ET N N+ ++ + T++ S EE + V++ + + I E+L
Sbjct: 2 ETAATNGNLENFIQYDSTATDYSSKEEIKEGSNDNIYMNNVTISKEEEAEIIDRTEQLKV 181
Query: 91 DFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGR 150
+G K++KP RG+H +V + E A+ ++ TF D+ H R
Sbjct: 182 G-KGPAKNKNAKPPSPRGSHAS------SVKKNKDGKDEEVASSVSNGTFASDS---HPR 331
Query: 151 KSVNKKNV------LSSNTLKQNQLKTPLVPRKPLKPDNKK--HSDEDDSCSVASGTATS 202
+ + +++ LS + K N + K +KK H + +S TA
Sbjct: 332 QPIKNRSLSDKQARLSKHPGKSNAAHSEESMEKTRPQLSKKDPHDNLQGEAESSSPTAED 511
Query: 203 VKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQ 262
K + A SF+ ERA+RRKEFY+KLEEK A E E++ +A++KE +E IK
Sbjct: 512 AKPRRVGALPKYGFSFKCDERAERRKEFYTKLEEKIHAKEVEESNLQAKTKENQEAEIKM 691
Query: 263 LRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGA 322
LR+SL FKA+PMPSFY E PPP+ +L+K+P TRAKSPKLGR+KS+ + EG A
Sbjct: 692 LRKSLGFKATPMPSFYQEPPPPRAELRKMPTTRAKSPKLGRKKSSINS--EPEGNTSNSA 865
Query: 323 AAQRKHRTSNTNNCNLSDVTNG 344
R+ R S + ++ TNG
Sbjct: 866 ---RQGRLSLDEKMSQTNPTNG 922
>TC217093
Length = 1829
Score = 130 bits (326), Expect = 1e-30
Identities = 78/183 (42%), Positives = 106/183 (57%), Gaps = 6/183 (3%)
Frame = +2
Query: 156 KNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASA 215
K++ S +L +Q+ P KP K ++ HS T+ R + S
Sbjct: 842 KSLTSEESLPVDQISIPAKTEKPNKEEDDAHS-------------TTSSHTPRRRSSGSG 982
Query: 216 PSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMP 275
SFR ERA++RKEF+SKLEEK Q EAEK + +SKE +E IKQLR+++ FKA+PMP
Sbjct: 983 FSFRLEERAEKRKEFFSKLEEKIQEKEAEKTNQQEKSKENQEAEIKQLRKTMTFKATPMP 1162
Query: 276 SFYHEGPPPKVDLKKLPPTRAKSPKLGRRK------SNSGAVYSSEGVKEKGAAAQRKHR 329
SFY E PPPKV+LKK+P TR KSPKLGR K S + S G +++ + + K +
Sbjct: 1163 SFYKE-PPPKVELKKIPITRPKSPKLGRHKGSAVNNSEDKSSSSPHGKQQQNDSTKAKAK 1339
Query: 330 TSN 332
SN
Sbjct: 1340 GSN 1348
>TC215601 similar to UP|Q7XYW3 (Q7XYW3) Seed specific protein Bn15D14A
(Fragment), partial (12%)
Length = 615
Score = 117 bits (293), Expect = 9e-27
Identities = 67/115 (58%), Positives = 77/115 (66%)
Frame = +2
Query: 269 FKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGAAAQRKH 328
FKASPMPSFYHEGPPPK LP TRAKSPKLGRRKSN+GAV SEG KEKGA +RKH
Sbjct: 14 FKASPMPSFYHEGPPPK-----LPATRAKSPKLGRRKSNNGAVN*SEGDKEKGAGIRRKH 178
Query: 329 RTSNTNNCNLSDVTNGSGLDGLMSKTENETEHTKLIEEINMIKANGQAGIEISSQ 383
T T+N NG +S +N+T+H IEEI+ + GQA +EI SQ
Sbjct: 179 HTLKTDNYGDKSDVNG------LSDLKNKTKH---IEEIDATEVTGQADLEIGSQ 316
>TC215602 weakly similar to UP|Q84WL6 (Q84WL6) At3g23090, partial (17%)
Length = 690
Score = 94.0 bits (232), Expect = 1e-19
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +2
Query: 176 RKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSK 233
R PL+PDNKKH D+DDSCSVAS TA SV+S KSR TVASAP FRST+RA++RKEFYSK
Sbjct: 11 RMPLQPDNKKHPDDDDSCSVASITAASVRSIKSRTTVASAPVFRSTQRAEKRKEFYSK 184
Score = 64.3 bits (155), Expect = 9e-11
Identities = 41/89 (46%), Positives = 50/89 (56%)
Frame = +2
Query: 295 RAKSPKLGRRKSNSGAVYSSEGVKEKGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKT 354
RA+ K KSN+GAV SEG KEKGA +RKH T TNN NG +S
Sbjct: 152 RAEKRKEFYSKSNNGAVNLSEGDKEKGAGIRRKHHTPKTNNYGDKSDVNG------LSDP 313
Query: 355 ENETEHTKLIEEINMIKANGQAGIEISSQ 383
+N+T+H IE IN + GQA +EI SQ
Sbjct: 314 KNKTKH---IEGINATEVTGQANLEIGSQ 391
>CA953137 similar to GP|27765054|gb| At3g23090 {Arabidopsis thaliana},
partial (12%)
Length = 420
Score = 79.0 bits (193), Expect = 3e-15
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +3
Query: 1 MGIEDSDICIIKEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHI 46
MG+ED+DICIIKEPD VVVYSDGIS DSGHE G+D+HN+T S H+
Sbjct: 63 MGVEDTDICIIKEPDHVVVYSDGISHDSGHEAGSDHHNITVSNSHV 200
Score = 78.6 bits (192), Expect = 4e-15
Identities = 39/47 (82%), Positives = 43/47 (90%)
Frame = +2
Query: 199 TATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEK 245
TA SV+S KSR TVASAP FRST+RA++RKEFYSKLEEKQQAMEAEK
Sbjct: 278 TAASVRSIKSRTTVASAPVFRSTQRAEKRKEFYSKLEEKQQAMEAEK 418
>BE608412
Length = 441
Score = 78.6 bits (192), Expect = 4e-15
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +1
Query: 223 RAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGP 282
RA+RRK+FY KLEEK A EAE NQ +A S+E+ E IK+LR+SL FKA+PMPSFY
Sbjct: 1 RAERRKQFYMKLEEKMYAKEAEINQMQAMSQEKTEADIKKLRKSLNFKATPMPSFYCTPS 180
Query: 283 PPKVDLKKLPPTRAKSPKLGRRKSN 307
P + K P + +++ N
Sbjct: 181 PSQPHGNKFQPQAVSNNTRSKKEHN 255
>TC205940 similar to UP|Q761Z8 (Q761Z8) BRI1-KD interacting protein 116
(Fragment), partial (18%)
Length = 876
Score = 76.6 bits (187), Expect = 2e-14
Identities = 44/107 (41%), Positives = 58/107 (54%)
Frame = +1
Query: 256 KEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSE 315
++ AI QLR++L KA P+P+FY+EGPPPK +LKKLP TR KSPKL RR+S A
Sbjct: 10 EDAAINQLRKNLVVKAKPVPNFYYEGPPPKTELKKLPLTRPKSPKLSRRRSCGDAAGVFP 189
Query: 316 GVKEKGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENETEHTK 362
+ +G R S NN + D + + N T TK
Sbjct: 190 EISSRG-------RHSVGNNPKHGSLVPPKNKDLVTGRNSNGTSKTK 309
>TC209230
Length = 670
Score = 75.5 bits (184), Expect = 4e-14
Identities = 39/62 (62%), Positives = 48/62 (76%), Gaps = 5/62 (8%)
Frame = -1
Query: 253 KEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRK-----SN 307
+E +E I+ LR+S+ FKA+PMPSFY E PPPKV+LKK+P TRAKSPKLGR K +N
Sbjct: 490 QENQEAEIRLLRKSMAFKATPMPSFYKE-PPPKVELKKIPTTRAKSPKLGRHKEFAMNNN 314
Query: 308 SG 309
SG
Sbjct: 313 SG 308
>TC209231 similar to UP|Q761Z6 (Q761Z6) BRI1-KD interacting protein 118
(Fragment), partial (14%)
Length = 552
Score = 75.1 bits (183), Expect = 5e-14
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +2
Query: 256 KEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSE 315
+E I+ LR+S+ FKA+PMPSFY E PPPKV+LKK+P TRAKSPKLGR K + A+ ++
Sbjct: 5 QEAEIRLLRKSMAFKATPMPSFYKE-PPPKVELKKIPTTRAKSPKLGRHKES--AMNNNS 175
Query: 316 GVKEKGAAAQRKHRTSNTNN 335
G ++K + R + N +N
Sbjct: 176 G-EDKTCSIPRGKQQQNDSN 232
>BM519528
Length = 428
Score = 65.1 bits (157), Expect = 5e-11
Identities = 32/62 (51%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +3
Query: 193 CSVASG-TATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEAR 251
CS+ + +A S+++ +S+ T SAP+FR +ERA++R+EFY KLEEK +A+ EKNQ EAR
Sbjct: 114 CSLTTNISAMSMRTARSKVTHGSAPTFRCSERAEKRREFYLKLEEKHRALREEKNQYEAR 293
Query: 252 SK 253
K
Sbjct: 294 LK 299
>BI321564 weakly similar to GP|28453880|gb| WAVE-DAMPENED2 {Arabidopsis
thaliana}, partial (19%)
Length = 329
Score = 62.0 bits (149), Expect = 4e-10
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 192 SCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEAR 251
S ++ S A S ++ KS+ TV SAP+FR ++RA+ EFY KLEEK +A+E EKNQ EAR
Sbjct: 98 SLTIISSVA-SARTAKSKVTVGSAPTFRCSDRAEILLEFYLKLEEKHRALEEEKNQYEAR 274
Query: 252 SK 253
K
Sbjct: 275 KK 280
>TC230825 similar to UP|O48683 (O48683) F3I6.9 protein, partial (20%)
Length = 1540
Score = 43.9 bits (102), Expect = 1e-04
Identities = 61/282 (21%), Positives = 99/282 (34%), Gaps = 43/282 (15%)
Frame = +3
Query: 35 DNHNMTESYEHINETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEG 94
+N+ E + I+ + + S E EVK+ K V ++ K +
Sbjct: 660 NNNIEAEDVKEISHVVYKETGKAS--EGEVKDVKLN-HPKESKVKSVSKGSNAARTKKKS 830
Query: 95 VLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVN 154
+L + P T + KP T P S + + LTR + G RK N
Sbjct: 831 MLPTSKASPISTPKSSKPASTTPTKTVTPASSTRKGSSPSLTR---RQITSSGESRKFAN 1001
Query: 155 KKNVLSSNTLKQNQLKTPL-VPRKPLKPDNKKHSD-------------EDDSCSVASGTA 200
K +S + N P R+ L +N D SV +
Sbjct: 1002KPLHMSLSLAPSNPDPAPQSTMRRSLIMENMGDKDIVKRAFKTFQNSFNQPKTSVEDKSL 1181
Query: 201 TSVKSFKSRATVASAPSFRSTE-----------------------------RAQRRKEFY 231
K SR TV+ P+ + RA++ KE
Sbjct: 1182IK-KQVPSRGTVSKVPTSTTLRKENGRPTKVENLYQSGNAVRTTLGPKRDIRAEKGKESS 1358
Query: 232 SKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASP 273
K+EEK E+ + +++ KEEKE +K+L+ ++K +SP
Sbjct: 1359RKIEEKSNTKGVERTRLQSKVKEEKEAEMKRLKHNVKGTSSP 1484
>TC230922
Length = 1013
Score = 38.9 bits (89), Expect = 0.004
Identities = 25/72 (34%), Positives = 39/72 (53%), Gaps = 2/72 (2%)
Frame = +3
Query: 209 RATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARS--KEEKEEAIKQLRRS 266
R T+ P R A++ KE K+EEK A E+ + + + KEEKE +K+L+ +
Sbjct: 60 RTTLGPKPDIR----AEKGKESSRKIEEKSNAKGVERTRLQLKLTVKEEKEAEMKRLKHN 227
Query: 267 LKFKASPMPSFY 278
K +P P+FY
Sbjct: 228 AK--GTPSPAFY 257
>BU547048 PIR|S41689|S41 cytochrome-c oxidase (EC 1.9.3.1) chain I -
Theileria parva mitochondrion (fragment), partial (2%)
Length = 556
Score = 38.1 bits (87), Expect = 0.007
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = -1
Query: 223 RAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASP 273
RA++ KE K+EEK + E+ +++ KEEKE +K + ++K +SP
Sbjct: 544 RAEKGKECSRKIEEKXNSKGVERTXXQSKVKEEKEAEMKXXKHNVKGTSSP 392
>BQ298040
Length = 421
Score = 38.1 bits (87), Expect = 0.007
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 158 VLSSNTLKQNQLKTPLVPRKPLKPDNKKH 186
VL++ TL QLK+P+V RKPL+PDNKKH
Sbjct: 339 VLTAFTL---QLKSPVVSRKPLQPDNKKH 416
>TC227495 similar to UP|P93273 (P93273) PAFD103 protein (Fragment), partial
(58%)
Length = 832
Score = 37.7 bits (86), Expect = 0.009
Identities = 31/131 (23%), Positives = 54/131 (40%), Gaps = 2/131 (1%)
Frame = +2
Query: 138 PTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKP--DNKKHSDEDDSCSV 195
PT +ED+ G +K + K + + K +K K + K+ D+ D
Sbjct: 188 PTGQEDDSNGAEKKEEDPKGAVEKKENATGESKNAKKKKKKDKSSKEQKESQDQLDGLDA 367
Query: 196 ASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEE 255
+G ATS + +A ASA + ER ++ K K+ A NEA ++
Sbjct: 368 GTGNATSETAETEKAEDASAIDVK--ERLKKVASMKKKKSSKEMDAAARAAANEAAARNA 541
Query: 256 KEEAIKQLRRS 266
+ A K+ ++
Sbjct: 542 RLAASKKKEKA 574
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.305 0.123 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,940,725
Number of Sequences: 63676
Number of extensions: 186228
Number of successful extensions: 1389
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of query: 383
length of database: 12,639,632
effective HSP length: 99
effective length of query: 284
effective length of database: 6,335,708
effective search space: 1799341072
effective search space used: 1799341072
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC145202.1