TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145157.11 + phase: 0 
         (74 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC219264 similar to GB|AAO63372.1|28950897|BT005308 At1g30825 {A...   128  5e-31
BM732110                                                               44  2e-05
AW508948 similar to GP|13605793|gb| At1g50300/F14I3_23 {Arabidop...    27  2.5
TC230763                                                               26  3.3
TC230368                                                               26  4.3
TC214108 similar to UP|RK29_ARATH (Q9FJP3) 50S ribosomal protein...    26  4.3
TC205520 ferredoxin:sulfite reductase precursor [Glycine max]          26  4.3
TC210789 similar to UP|Q9SFE9 (Q9SFE9) T26F17.9 (GONST5 Golgi Nu...    25  5.7
TC218907 weakly similar to UP|Q94AW2 (Q94AW2) AT5g39590/MIJ24_60...    25  9.7

>TC219264 similar to GB|AAO63372.1|28950897|BT005308 At1g30825 {Arabidopsis
           thaliana;} , partial (43%)
          Length = 615

 Score =  128 bits (322), Expect = 5e-31
 Identities = 62/67 (92%), Positives = 66/67 (97%)
 Frame = +1

Query: 1   MKNPNIFLLSVSLPTPSSETIFVCGLPFGAIEAIKAAYGSLVQILDPPRDGFNLTLKINL 60
           MKNP++ LLSVSLPTPSSETIFVCGLPFGAIEAIKAAYG+LVQILDPPRDGFNLTLKINL
Sbjct: 307 MKNPHVLLLSVSLPTPSSETIFVCGLPFGAIEAIKAAYGNLVQILDPPRDGFNLTLKINL 486

Query: 61  SKVPANQ 67
           SK+PANQ
Sbjct: 487 SKLPANQ 507


>BM732110 
          Length = 421

 Score = 43.9 bits (102), Expect = 2e-05
 Identities = 20/23 (86%), Positives = 22/23 (94%)
 Frame = +2

Query: 1   MKNPNIFLLSVSLPTPSSETIFV 23
           MKNP++ LLSVSLPTPSSETIFV
Sbjct: 353 MKNPHVLLLSVSLPTPSSETIFV 421


>AW508948 similar to GP|13605793|gb| At1g50300/F14I3_23 {Arabidopsis
           thaliana}, partial (24%)
          Length = 439

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +3

Query: 16  PSSETIFVCGLPFGAIEAIKAAYGSLVQIL 45
           PS+ +++VC LP+G  + + A Y   + ++
Sbjct: 168 PSNGSVYVCNLPYGTDDNMLAEYFGTIGLI 257


>TC230763 
          Length = 1058

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -1

Query: 4   PNIFLL--SVSLPTPSSETIFVCGLP 27
           PN+FLL  + + PTPS    F+C  P
Sbjct: 554 PNLFLL*DAFADPTPSFRFFFICAAP 477


>TC230368 
          Length = 895

 Score = 25.8 bits (55), Expect = 4.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 13  LPTPSSETIFVCGLP 27
           LP+PSS T ++C LP
Sbjct: 384 LPSPSSGTTYICSLP 428


>TC214108 similar to UP|RK29_ARATH (Q9FJP3) 50S ribosomal protein L29,
           chloroplast precursor, partial (68%)
          Length = 1202

 Score = 25.8 bits (55), Expect = 4.3
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 8   LLSVSLPTPSSETIFVCGLPFGAIEAIKAAYGSL 41
           +LS+S+ +PSS TI     PF  I+  ++A  S+
Sbjct: 85  MLSLSVASPSSSTISFLPKPFNGIQLRRSATCSI 186


>TC205520 ferredoxin:sulfite reductase precursor [Glycine max]
          Length = 2633

 Score = 25.8 bits (55), Expect = 4.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 2    KNPNIFLLSVSLPTPSSETIFVC 24
            KNPNI L+   LP  ++  +F C
Sbjct: 2281 KNPNISLVEPELPHSNNRVVFSC 2213


>TC210789 similar to UP|Q9SFE9 (Q9SFE9) T26F17.9 (GONST5 Golgi Nucleotide
           sugar transporter), partial (33%)
          Length = 502

 Score = 25.4 bits (54), Expect = 5.7
 Identities = 9/22 (40%), Positives = 16/22 (71%)
 Frame = -3

Query: 5   NIFLLSVSLPTPSSETIFVCGL 26
           N++ + +SLP  ++ET F+C L
Sbjct: 473 NLYTI*LSLPLQTAETSFICSL 408


>TC218907 weakly similar to UP|Q94AW2 (Q94AW2) AT5g39590/MIJ24_60, partial
           (40%)
          Length = 991

 Score = 24.6 bits (52), Expect = 9.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 4   PNIFLLSVSLPTPSSETIFVCGLPF 28
           P + LLS++L   + E I + GLPF
Sbjct: 878 PRLCLLSIALSNATLEMIQLSGLPF 804


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.321    0.141    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,345,141
Number of Sequences: 63676
Number of extensions: 39544
Number of successful extensions: 181
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of query: 74
length of database: 12,639,632
effective HSP length: 50
effective length of query: 24
effective length of database: 9,455,832
effective search space: 226939968
effective search space used: 226939968
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)