BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145024.28 - phase: 0
(1155 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC232528 weakly similar to UP|Q6WAY5 (Q6WAY5) Gag/pol polyprotei... 145 1e-34
CF922341 103 3e-22
BU084093 91 2e-18
TC219643 weakly similar to UP|Q6WAY7 (Q6WAY7) Gag/pol polyprotei... 59 9e-09
AW706233 59 2e-08
BI674393 52 1e-06
TC228885 49 1e-05
TC215424 similar to UP|Q9MA04 (Q9MA04) F20B17.16, partial (26%) 48 3e-05
TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 47 5e-05
CF922207 45 1e-04
TC224765 similar to UP|Q09082 (Q09082) Extensin (Class I), parti... 45 2e-04
TC204052 homologue to UP|Q39835 (Q39835) Extensin, partial (67%) 45 2e-04
TC224723 hydroxyproline-rich glycoprotein 45 2e-04
TC224645 homologue to UP|Q41707 (Q41707) Extensin class 1 protei... 44 3e-04
TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein ... 44 3e-04
TC233960 similar to UP|OPSD_SEPOF (O16005) Rhodopsin, partial (10%) 44 4e-04
TC224792 homologue to UP|Q39865 (Q39865) Hydroxyproline-rich gly... 43 7e-04
TC221951 UP|NO75_SOYBN (P08297) Early nodulin 75 precursor (N-75... 43 0.001
TC214303 similar to UP|Q9T0K5 (Q9T0K5) Extensin-like protein, pa... 43 0.001
TC204046 UP|Q39835 (Q39835) Extensin, complete 42 0.002
>TC232528 weakly similar to UP|Q6WAY5 (Q6WAY5) Gag/pol polyprotein
(Fragment), partial (3%)
Length = 449
Score = 145 bits (365), Expect = 1e-34
Identities = 71/138 (51%), Positives = 100/138 (72%)
Frame = +1
Query: 826 AKISIMALLSSSGAHRDALRKVLDQAFVDYDVTLGQFESIVGNVTACNSLTFSDEDLPAE 885
A++S++ LL SS HR L KVL++A V D+++ F +V N+TA N L F++E++PAE
Sbjct: 31 ARVSLLELLMSSEPHRALLVKVLNEAHVAQDISVEGFGGLVNNITANNYLAFAEEEIPAE 210
Query: 886 GNKHNQALLISVLCRTDSLSNVLIDTGSALNVMPKSTLDQLAYSEAPLRLSKVTVRAFDG 945
G HN+AL +SV C ++ VLID G +LNVMPKSTLD+L ++ + L+ S + VRAFDG
Sbjct: 211 GRGHNKALHVSVKCMDHIVAKVLIDNGYSLNVMPKSTLDKLPFNASHLKPSSMVVRAFDG 390
Query: 946 TRRSVYGEVDLPISVGPH 963
TRR V GE+DLP+ +GPH
Sbjct: 391 TRREVRGEIDLPVQIGPH 444
>CF922341
Length = 675
Score = 103 bits (258), Expect = 3e-22
Identities = 60/152 (39%), Positives = 90/152 (58%), Gaps = 6/152 (3%)
Frame = +1
Query: 163 GPQHEEQIYHSDSIMGDDKAIDWEERFGALEKKMSNMR----GKEAVVQSIYDLCLVPDV 218
GPQ+ Q++ S + + E G L+ +R G++ ++ +L LVP++
Sbjct: 226 GPQYHPQLHLLHSTTSKNPHVMAE--MGKLDHLEEGLRAIEGGEDYAFANLEELFLVPNI 399
Query: 219 NIPPKFKMPVFEKYQGDTCPQNHLTMYISKMIAYKNNVPLLIHCFQDSLTGPAHTWFMGL 278
PPKFK+ F+KY+G TCP+NHL MY KM AY + LLIH FQ+SLTG A TW+ L
Sbjct: 400 ITPPKFKVLDFDKYKGTTCPKNHLKMYCQKMGAYAKDEELLIHSFQESLTGVAVTWYTNL 579
Query: 279 K--GVTTFEQLAEAFMQQYKYNTYLAPSRKEL 308
+ V +++ L AF++QY+YN + SR +L
Sbjct: 580 EPSRVHSWKDLMVAFVRQYQYNFDMVLSRMQL 675
>BU084093
Length = 421
Score = 91.3 bits (225), Expect = 2e-18
Identities = 50/118 (42%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Frame = -1
Query: 476 SQQPYYPQQPYQQR-PYNPPQQQPRPQAPYNQQNQK-----QQFDPLPMTYGALLPSLLA 529
S P P+ P Q+ P P RP N Q+F PLPMTY LLPSL+A
Sbjct: 355 SSTPVQPKAPAQREAPQVPTPNTTRPVGNSNTTRNFPPRPFQEFTPLPMTYEDLLPSLIA 176
Query: 530 QNLVQTIPPPRIPDPLPRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLINSKELTF 587
+L P + P P+WY P+ C YH G PGH VE+C ALK +VQ L+++ LTF
Sbjct: 175 NHLAVVTPGRVLQPPFPKWYDPNATCKYHGGVPGHSVEKCLALKYKVQHLMDAGWLTF 2
>TC219643 weakly similar to UP|Q6WAY7 (Q6WAY7) Gag/pol polyprotein (Fragment),
partial (8%)
Length = 1320
Score = 59.3 bits (142), Expect = 9e-09
Identities = 46/134 (34%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Frame = +1
Query: 985 PWIHDAGAVTSTLHQKLKFVSRGKLITVSGESAFLISNLSAFSVI-GGSSSDGPSFQGF- 1042
PWIH G V STLHQKLKFV G L+ VSGE L+S S+ + S +FQ F
Sbjct: 1 PWIHSVGVVPSTLHQKLKFVVEGHLVIVSGEEDILVSCPSSMPYVEAAEESLETAFQSFE 180
Query: 1043 -----SAEESVGKIETCMASLKDARRVIQEG---------KTGGWGQLVELPENKRKEGI 1088
S + G+ A++ AR ++ G GG L+ N+ K G+
Sbjct: 181 VVSISSVDSLFGQPCLSDAAVMMARVMLGNGYEPGMGLGKDNGGITSLINTQGNRGKYGL 360
Query: 1089 GFLNSKPGMFDPTR 1102
G+ KP D R
Sbjct: 361 GY---KPTQADMKR 393
>AW706233
Length = 376
Score = 58.5 bits (140), Expect = 2e-08
Identities = 30/67 (44%), Positives = 43/67 (63%)
Frame = -3
Query: 186 EERFGALEKKMSNMRGKEAVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQNHLTMY 245
+ERF A+E G++ ++ +L LV ++ PPKFK+ F+KY+G TCP+NHL MY
Sbjct: 329 KERFKAIEG------GQDYAFANLEELFLVXNIISPPKFKVLNFDKYKGTTCPKNHLKMY 168
Query: 246 ISKMIAY 252
KM AY
Sbjct: 167 CQKMGAY 147
>BI674393
Length = 152
Score = 52.4 bits (124), Expect = 1e-06
Identities = 24/49 (48%), Positives = 39/49 (78%)
Frame = +1
Query: 801 EDADEVLKLIKKSEYRVVDQLLQTPAKISIMALLSSSGAHRDALRKVLD 849
E+A E L++I++SE++V++QL +TPA++S++ LL SS HR L KVL+
Sbjct: 4 EEASEFLRIIQQSEFKVIEQLNKTPARVSLLELLMSSEPHRALLVKVLN 150
>TC228885
Length = 901
Score = 49.3 bits (116), Expect = 1e-05
Identities = 28/78 (35%), Positives = 41/78 (51%)
Frame = -3
Query: 512 QFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDPLPRWYRPDLHCIYHQGAPGHDVERCFA 571
+F P+P++Y LLP LL ++V P R Y + C H APG +E A
Sbjct: 620 EFTPIPVSYADLLPYLLDNSMVAITLAKVHQPPFLREYDSNAMCACHGEAPGRSIEHYRA 441
Query: 572 LKKEVQKLINSKELTFTD 589
LK++VQ LI++ L F +
Sbjct: 440 LKRKVQGLIDAGWLKFEE 387
>TC215424 similar to UP|Q9MA04 (Q9MA04) F20B17.16, partial (26%)
Length = 1030
Score = 47.8 bits (112), Expect = 3e-05
Identities = 33/102 (32%), Positives = 43/102 (41%)
Frame = +3
Query: 420 VAHGGPQPVYSNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQP 479
V + P P + ++P+ P P +YQ P P PAP Y P + Q S QP
Sbjct: 93 VPYAPPNPHHPHYPYPP---PPPPPPPEASYQPPPPPPPAPMYYP------SNNQYSNQP 245
Query: 480 YYPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYG 521
P P P PP P P P Q N+++ F P T G
Sbjct: 246 PPPPPPLSPPP-PPPPVSPPPPPPVTQNNEERHFKE-PSTSG 365
>TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (22%)
Length = 1296
Score = 47.0 bits (110), Expect = 5e-05
Identities = 39/130 (30%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
Frame = +1
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNY---QSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY 481
P PVYS P P P +P Y P P P P PP P+++ Q Y
Sbjct: 37 PPPVYSPPP-----PPPSPPPPSPTYCVRSPPPPSPPPPSPPPPPPPVFSPPPPVQYYYS 201
Query: 482 PQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPPRI 541
P Q P PP P P P P P Y L P PPP +
Sbjct: 202 SPPPPQHSPPPPPPHSPPPPPP----------SPPPPVYPYLSPP----------PPPPV 321
Query: 542 PDPLPRWYRP 551
P P Y P
Sbjct: 322 HSPPPPVYSP 351
Score = 40.4 bits (93), Expect = 0.005
Identities = 36/131 (27%), Positives = 49/131 (36%), Gaps = 4/131 (3%)
Frame = +1
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYYPQQ 484
P PVY P+++ P P SP P P+P PP +P + P P
Sbjct: 274 PPPVY---PYLSPPPPPPVHSPPPPVYSPPPPPPSP--PPCIEPPPPPPPCIEPPPPPPS 438
Query: 485 PYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNL----VQTIPPPR 540
P ++PP P P APY+ P P+ Y + P + PPP
Sbjct: 439 PPPCEEHSPPPPSPHP-APYHPPPSPSP-PPPPVQYNSPPPPSPPPPTPVYHYNSPPPPS 612
Query: 541 IPDPLPRWYRP 551
P P P + P
Sbjct: 613 FPPPTPVYEGP 645
Score = 38.9 bits (89), Expect = 0.013
Identities = 37/138 (26%), Positives = 44/138 (31%), Gaps = 20/138 (14%)
Frame = +1
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNP----------------NYQSPRPQGP--APYYP 463
H P PVYS P + P + P P SP P P APY+P
Sbjct: 322 HSPPPPVYSPPPPPPSPPPCIEPPPPPPPCIEPPPPPPSPPPCEEHSPPPPSPHPAPYHP 501
Query: 464 PLYQPLYNLQQLSQQPYYPQQPYQQRPYNPPQQQPRPQAPYNQQNQ--KQQFDPLPMTYG 521
P P P P Q +PP P P P N F P Y
Sbjct: 502 P------------PSPSPPPPPVQYN--SPPPPSPPPPTPVYHYNSPPPPSFPPPTPVYE 639
Query: 522 ALLPSLLAQNLVQTIPPP 539
LP ++ + PPP
Sbjct: 640 GPLPPVIGVSYASPPPPP 693
Score = 31.2 bits (69), Expect = 2.7
Identities = 34/127 (26%), Positives = 41/127 (31%)
Frame = +1
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYYPQQ 484
P PV+S P V ++P P + P P +P PP P LS P P
Sbjct: 154 PPPVFSPPPPVQYY---YSSPPPPQHSPPPPPPHSPPPPPPSPPPPVYPYLSPPPPPPVH 324
Query: 485 PYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDP 544
Y+PP P P P P P + PPP P P
Sbjct: 325 SPPPPVYSPPPPPPSPPPCIEPP------PPPPPCIEPPPPPPSPPPCEEHSPPPPSPHP 486
Query: 545 LPRWYRP 551
P Y P
Sbjct: 487 AP--YHP 501
>CF922207
Length = 616
Score = 45.4 bits (106), Expect = 1e-04
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -1
Query: 523 LLPSLLAQNLVQTIPPPRIPDP-LPRWYRPDLHCIYHQGAPGHDVERCFALKKEVQKLIN 581
L+P L ++V I P ++P P R Y + C YH GAPGH +E C K +V LI+
Sbjct: 532 LIPYPLDNSMV-AITPTKVPQPPFFREYDSNATCAYHGGAPGHSIEHCMTPKHKV*SLID 356
Query: 582 SKELTFTD 589
+ L F +
Sbjct: 355 TG*LKFEE 332
>TC224765 similar to UP|Q09082 (Q09082) Extensin (Class I), partial (46%)
Length = 708
Score = 45.1 bits (105), Expect = 2e-04
Identities = 44/153 (28%), Positives = 59/153 (37%), Gaps = 15/153 (9%)
Frame = +3
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNY-QSPRPQGPAPYY--PPLYQPLYNLQQ----LSQ 477
P P Y + P P +P +P Y +SP P P Y PP P Y + +
Sbjct: 27 PTPYYYHSP-----PPPSPSPPSPYYYKSPPPPSPVYIYKSPPPPSPTYVYKSPPPPVKS 191
Query: 478 QPYY-----PQQPYQQRPY---NPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLA 529
PYY P P + PY +PP P+P+ PY Q+ P+P P
Sbjct: 192 PPYYYQSPPPPSPKPKPPYYYKSPPPPSPKPKPPYYYQSPPPP-SPVPK------PPYYY 350
Query: 530 QNLVQTIPPPRIPDPLPRWYRPDLHCIYHQGAP 562
++ PPP P P P +Y YH P
Sbjct: 351 KS-----PPPPSPVPKPPYY-------YHSPPP 413
Score = 43.1 bits (100), Expect = 7e-04
Identities = 34/126 (26%), Positives = 45/126 (34%), Gaps = 1/126 (0%)
Frame = +3
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNY-QSPRPQGPAPYYPPLYQPLYNLQQLSQQPYYPQ 483
P PV S + + P P+ P Y +SP P P P +P Y Q P+
Sbjct: 174 PPPVKSPPYYYQSPPPPSPKPKPPYYYKSPPPPSPKP------KPPYYYQSPPPPSPVPK 335
Query: 484 QPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPD 543
PY + PP P+P Y+ P P Y + PPP P
Sbjct: 336 PPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKS--------------PPPPSPS 473
Query: 544 PLPRWY 549
P P +Y
Sbjct: 474 PPPPYY 491
Score = 40.8 bits (94), Expect = 0.003
Identities = 37/139 (26%), Positives = 46/139 (32%), Gaps = 1/139 (0%)
Frame = +3
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNY-QSPRPQGPAPYYPPLYQPLYNLQQLSQQPYYPQ 483
P+P Y + + P P+ P Y QSP P P P P Y+ + + PYY
Sbjct: 234 PKPPY----YYKSPPPPSPKPKPPYYYQSPPPPSPVPKPPYYYKSPPPPSPVPKPPYYYH 401
Query: 484 QPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPD 543
P PP P P Y P P Y + PPP P
Sbjct: 402 SP------PPPSPSPPPPYYYKSPPPPSPSPPPPYYYKS--------------PPPPSPS 521
Query: 544 PLPRWYRPDLHCIYHQGAP 562
P P +Y YH P
Sbjct: 522 PPPPYY-------YHSPPP 557
>TC204052 homologue to UP|Q39835 (Q39835) Extensin, partial (67%)
Length = 1083
Score = 44.7 bits (104), Expect = 2e-04
Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 13/141 (9%)
Frame = +3
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNPNYQSPRP---QGPAPYY-----PPLYQPLYNLQ 473
H P P Y + P P+ + P Y SP P P PYY PP + P
Sbjct: 195 HSPPPPYYYHSP----PPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYY 362
Query: 474 QLSQQP--YYPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLP---SLL 528
S P + P PY PP+ P P Y+ + P P Y +L P S
Sbjct: 363 YHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSLPPPKHSPP 542
Query: 529 AQNLVQTIPPPRIPDPLPRWY 549
+ PPP+ P P +Y
Sbjct: 543 PPYYYHSPPPPKHSPPPPYYY 605
Score = 39.7 bits (91), Expect = 0.008
Identities = 31/109 (28%), Positives = 39/109 (35%), Gaps = 10/109 (9%)
Frame = +3
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNPNYQSPRP---QGPAPYY-----PPLYQPL--YN 471
H P P Y + P P+ + P Y SP P P PYY PP + P Y
Sbjct: 339 HSPPPPYYYHSP----PPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYY 506
Query: 472 LQQLSQQPYYPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTY 520
L + P PY PP+ P P Y+ + P P Y
Sbjct: 507 YHSLPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYY 653
Score = 36.6 bits (83), Expect = 0.065
Identities = 34/121 (28%), Positives = 42/121 (34%), Gaps = 11/121 (9%)
Frame = +3
Query: 440 PQMTAPQNPNYQSPRP---QGPAPYY-----PPLYQPLYNLQQLSQQPYYPQQPYQQRPY 491
P T N Y SP P P PYY PP + P PYY P
Sbjct: 93 PSQTLADNYIYSSPPPPKHSPPPPYYYHSPPPPKHSP--------PPPYYYHSP------ 230
Query: 492 NPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLP---SLLAQNLVQTIPPPRIPDPLPRW 548
PP+ P P Y+ + P P Y + P S + PPP+ P P +
Sbjct: 231 PPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYY 410
Query: 549 Y 549
Y
Sbjct: 411 Y 413
Score = 34.3 bits (77), Expect = 0.32
Identities = 26/94 (27%), Positives = 33/94 (34%), Gaps = 10/94 (10%)
Frame = +3
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY 481
H P P Y + P P+ + P Y SP P +P P Y L + PYY
Sbjct: 387 HSPPPPYYYHSP----PPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSLPPPKHSPPPPYY 554
Query: 482 ----------PQQPYQQRPYNPPQQQPRPQAPYN 505
P PY PP+ P P Y+
Sbjct: 555 YHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYH 656
>TC224723 hydroxyproline-rich glycoprotein
Length = 2345
Score = 44.7 bits (104), Expect = 2e-04
Identities = 41/153 (26%), Positives = 54/153 (34%), Gaps = 12/153 (7%)
Frame = +1
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNPN---YQSPRPQGPAPYYPPLYQPLYNLQQLSQQ 478
H P P S P +P +P P+ Y+SP P P+P P YQ S
Sbjct: 925 HSPPPPSPSPPPPYYYHSPPPPSPSPPSPYYYKSPPPPSPSPPPPYYYQSPPPPSPTSHP 1104
Query: 479 PYYPQQP-----YQQRPY---NPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQ 530
PYY + P Y PY +PP P P PY+
Sbjct: 1105 PYYYKSPPPPTSYPPPPYHYVSPPPPSPSPPPPYH------------------------- 1209
Query: 531 NLVQTIPPPRIPDPLPRW-YRPDLHCIYHQGAP 562
T PPP P P P++ Y+ +Y +P
Sbjct: 1210 ---YTSPPPPSPAPAPKYIYKSPPPPVYIYASP 1299
Score = 38.9 bits (89), Expect = 0.013
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 4/133 (3%)
Frame = +1
Query: 422 HGGPQPVYSNHP-FVANITPQMTAPQNPN---YQSPRPQGPAPYYPPLYQPLYNLQQLSQ 477
H P P HP + + P +P P Y+SP P P+P P Y S
Sbjct: 778 HSPPPPKEHVHPPYYYHSPPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYH--------SP 933
Query: 478 QPYYPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIP 537
P P P ++PP P P +PY ++ P P + PS Q+ P
Sbjct: 934 PPPSPSPPPPYYYHSPPPPSPSPPSPYYYKS------PPPPS-----PSPPPPYYYQSPP 1080
Query: 538 PPRIPDPLPRWYR 550
PP P +Y+
Sbjct: 1081PPSPTSHPPYYYK 1119
Score = 38.9 bits (89), Expect = 0.013
Identities = 34/133 (25%), Positives = 45/133 (33%), Gaps = 20/133 (15%)
Frame = +1
Query: 450 YQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY-----------PQQPYQQRPYNPPQQQP 498
Y+SP P P+P P Y ++ PYY P PY + PP P
Sbjct: 727 YKSPPPPSPSPPPPYYYHSPPPPKEHVHPPYYYHSPPPPPSPSPPPPYYYKSPPPPSPSP 906
Query: 499 RPQAPYNQQNQKQQFDPLPMTYGALLPSLLA--QNLVQTIPPPRIPDPLPRWY------- 549
P Y+ P P Y + P + PPP P P P +Y
Sbjct: 907 PPPYYYHSPPPPSPSPPPPYYYHSPPPPSPSPPSPYYYKSPPPPSPSPPPPYYYQSPPPP 1086
Query: 550 RPDLHCIYHQGAP 562
P H Y+ +P
Sbjct: 1087SPTSHPPYYYKSP 1125
Score = 36.2 bits (82), Expect = 0.085
Identities = 30/114 (26%), Positives = 39/114 (33%), Gaps = 1/114 (0%)
Frame = -3
Query: 450 YQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYYPQQPYQQRPYNPPQQQPRPQAPYNQQNQ 509
Y+SP P P+P P YQ PYY + P + PP P P
Sbjct: 558 YKSPPPPSPSPPPPYYYQSPPPPSPTPHPPYYYKSPPPPTSHPPPYHYVSPPPP------ 397
Query: 510 KQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDPLPRW-YRPDLHCIYHQGAP 562
P P Y T PPP P P P++ Y+ +Y +P
Sbjct: 396 -SPSPPPPYHY--------------TSPPPPSPAPAPKYIYKSPPPPVYIYASP 280
Score = 33.5 bits (75), Expect = 0.55
Identities = 26/90 (28%), Positives = 31/90 (33%), Gaps = 10/90 (11%)
Frame = -3
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNY-QSPRPQGPAPYYPPLYQ---------PLYNLQQ 474
P P Y P P +P P Y QSP P P P+ P Y+ P Y+
Sbjct: 573 PPPYYYKSP-----PPPSPSPPPPYYYQSPPPPSPTPHPPYYYKSPPPPTSHPPPYHYVS 409
Query: 475 LSQQPYYPQQPYQQRPYNPPQQQPRPQAPY 504
P PY PP P P+ Y
Sbjct: 408 PPPPSPSPPPPYHYTSPPPPSPAPAPKYIY 319
>TC224645 homologue to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (58%)
Length = 856
Score = 44.3 bits (103), Expect = 3e-04
Identities = 38/135 (28%), Positives = 46/135 (33%), Gaps = 10/135 (7%)
Frame = +2
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNY-QSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY-- 481
P P Y P P +P +P Y +SP P PY+PP Y S P Y
Sbjct: 71 PPPYYYKSP-----PPPSPSPPSPYYYKSPPPPHKDPYHPPYYYKSPPPPSPSPPPPYYY 235
Query: 482 ----PQQPYQQRPY---NPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQ 534
P P PY +PP P P PY ++ P Y
Sbjct: 236 KSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPY------------YY 379
Query: 535 TIPPPRIPDPLPRWY 549
PPP P P P +Y
Sbjct: 380 KSPPPPSPSPPPPYY 424
Score = 41.2 bits (95), Expect = 0.003
Identities = 37/134 (27%), Positives = 45/134 (32%), Gaps = 9/134 (6%)
Frame = +2
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNY-QSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY-- 481
P P Y P P +P P Y +SP P P+P P Y+ PYY
Sbjct: 266 PPPYYYKSP-----PPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYK 430
Query: 482 ---PQQPYQQRPY---NPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQT 535
P P PY +PP P P PY ++ P Y
Sbjct: 431 SPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPDPSPPPPY------------YYK 574
Query: 536 IPPPRIPDPLPRWY 549
PPP P P P +Y
Sbjct: 575 SPPPPSPSPPPPYY 616
Score = 40.8 bits (94), Expect = 0.003
Identities = 36/136 (26%), Positives = 43/136 (31%), Gaps = 11/136 (8%)
Frame = +2
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNY-QSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY-- 481
P P Y P P +P P Y +SP P P+P P Y+ PYY
Sbjct: 314 PPPYYYKSP-----PPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYK 478
Query: 482 --------PQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLV 533
P PY + PP P P Y P P Y +
Sbjct: 479 SPPPPSPSPPPPYYYKSPPPPDPSPPPPYYYKSPPPPSPSPPPPYYYKS----------- 625
Query: 534 QTIPPPRIPDPLPRWY 549
PPP P P P +Y
Sbjct: 626 ---PPPPSPSPPPPYY 664
Score = 40.8 bits (94), Expect = 0.003
Identities = 36/136 (26%), Positives = 43/136 (31%), Gaps = 11/136 (8%)
Frame = +2
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNY-QSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY-- 481
P P Y P P +P P Y +SP P P+P P Y+ PYY
Sbjct: 410 PPPYYYKSP-----PPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPDPSPPPPYYYK 574
Query: 482 --------PQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLV 533
P PY + PP P P Y P P Y +
Sbjct: 575 SPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKS----------- 721
Query: 534 QTIPPPRIPDPLPRWY 549
PPP P P P +Y
Sbjct: 722 ---PPPPSPSPPPPYY 760
Score = 39.7 bits (91), Expect = 0.008
Identities = 36/140 (25%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Frame = +2
Query: 425 PQPVYSN--HPFVANITPQMTAPQNPN---YQSPRPQGPAPYYPPLYQPLYNLQQLSQQP 479
P P + + HP +P +P P Y+SP P P+P P Y+ P
Sbjct: 143 PPPPHKDPYHPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPP 322
Query: 480 YY----------PQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLA 529
YY P PY + PP P P Y P P Y +
Sbjct: 323 YYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKS------- 481
Query: 530 QNLVQTIPPPRIPDPLPRWY 549
PPP P P P +Y
Sbjct: 482 -------PPPPSPSPPPPYY 520
Score = 37.4 bits (85), Expect = 0.038
Identities = 31/120 (25%), Positives = 40/120 (32%), Gaps = 14/120 (11%)
Frame = +2
Query: 444 APQNPNYQSPRPQGPAPYYPPLY------------QPLY--NLQQLSQQPYYPQQPYQQR 489
+P P+Y P P+P PP Y P Y + + PY+P PY +
Sbjct: 17 SPPPPSYYYKSPPPPSPSPPPYYYKSPPPPSPSPPSPYYYKSPPPPHKDPYHP--PYYYK 190
Query: 490 PYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDPLPRWY 549
PP P P Y P P Y + PPP P P P +Y
Sbjct: 191 SPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKS--------------PPPPSPSPPPPYY 328
Score = 37.4 bits (85), Expect = 0.038
Identities = 34/133 (25%), Positives = 42/133 (31%), Gaps = 8/133 (6%)
Frame = +2
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY--- 481
P P Y P P + P Y+SP P P+P P Y+ PYY
Sbjct: 506 PPPYYYKSP----PPPDPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKS 673
Query: 482 --PQQPYQQRPY---NPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTI 536
P P PY +PP P P PY ++
Sbjct: 674 PPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKS---------------------------- 769
Query: 537 PPPRIPDPLPRWY 549
PPP P P P +Y
Sbjct: 770 PPPPSPSPPPPYY 808
>TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (67%)
Length = 1240
Score = 44.3 bits (103), Expect = 3e-04
Identities = 35/135 (25%), Positives = 48/135 (34%), Gaps = 10/135 (7%)
Frame = +3
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY--- 481
P+P Y H + P + P Y+SP P P+P P Y+ + + PYY
Sbjct: 84 PKPPYYYH---SPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYYHS 254
Query: 482 -------PQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQ 534
P PY + PP P+P Y+ P P Y +
Sbjct: 255 PPPPSPSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKS------------ 398
Query: 535 TIPPPRIPDPLPRWY 549
PPP P P P +Y
Sbjct: 399 --PPPPSPSPPPPYY 437
Score = 42.7 bits (99), Expect = 0.001
Identities = 37/141 (26%), Positives = 47/141 (33%), Gaps = 13/141 (9%)
Frame = +3
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNPN---YQSPRPQGPAPYYPPLYQPLYNLQQLSQQ 478
H P P S P +P +P P Y+SP P P+P P Y ++
Sbjct: 345 HSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYHSPPPPKEHVHP 524
Query: 479 PYY----------PQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLL 528
PYY P PY + PP P P Y+ P P Y +
Sbjct: 525 PYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYHSPPPPSPSPPPPYYYHS------ 686
Query: 529 AQNLVQTIPPPRIPDPLPRWY 549
PPP P P P +Y
Sbjct: 687 --------PPPPSPSPPPPYY 725
Score = 42.4 bits (98), Expect = 0.001
Identities = 37/138 (26%), Positives = 46/138 (32%), Gaps = 13/138 (9%)
Frame = +3
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNY-QSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY-- 481
P P Y P P P+ P Y SP P P+P P Y+ + + PYY
Sbjct: 183 PPPYYYKSP-----PPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYYH 347
Query: 482 --------PQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLP--SLLAQN 531
P PY + PP P P Y P P Y + P +
Sbjct: 348 SPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYHSPPPPKEHVHPP 527
Query: 532 LVQTIPPPRIPDPLPRWY 549
PPP P P P +Y
Sbjct: 528 YYYHSPPPPSPSPPPPYY 581
Score = 41.6 bits (96), Expect = 0.002
Identities = 43/156 (27%), Positives = 56/156 (35%), Gaps = 15/156 (9%)
Frame = +3
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNPN---YQSPRPQGPAPYYPPLYQPLYNLQQLSQQ 478
H P P S P +P +P P Y SP P P+P P Y
Sbjct: 537 HSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYHSPPPPSPSPPPPYYYHSPPPPSPSPPP 716
Query: 479 PYY-----PQQPYQQRPY---NPPQQQPRPQAPYNQQNQKQQFD-PLPMTYGALLPSLLA 529
PYY P P PY +PP P P PY ++ P P Y + P +
Sbjct: 717 PYYYKSPPPPSPSPPPPYYYQSPPPPSPTPHPPYYYKSPPPPTSHPPPYHYVSPPPPSPS 896
Query: 530 QN--LVQTIPPPRIPDPLPRW-YRPDLHCIYHQGAP 562
T PPP P P P++ Y+ +Y +P
Sbjct: 897 PPPPYHYTSPPPPSPAPAPKYIYKSPPPPVYIYASP 1004
Score = 41.6 bits (96), Expect = 0.002
Identities = 40/142 (28%), Positives = 49/142 (34%), Gaps = 14/142 (9%)
Frame = +3
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNPN---YQSPRPQGPAPYYPPLYQPLYNLQQLSQQ 478
H P P HP +P +P P Y+SP P P+P P Y
Sbjct: 489 HSPPPPKEHVHPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYHSPPPPSPSPPP 668
Query: 479 PYY-----PQQPYQQRPY---NPPQQQPRPQAPYNQQNQKQQF-DPLPMTY--GALLPSL 527
PYY P P PY +PP P P PY Q+ P P Y P+
Sbjct: 669 PYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYQSPPPPSPTPHPPYYYKSPPPPTS 848
Query: 528 LAQNLVQTIPPPRIPDPLPRWY 549
PPP P P P ++
Sbjct: 849 HPPPYHYVSPPPPSPSPPPPYH 914
Score = 40.8 bits (94), Expect = 0.003
Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 8/108 (7%)
Frame = +3
Query: 450 YQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY-----PQQPYQQRPY---NPPQQQPRPQ 501
Y+SP P P P P YQ + + PYY P P PY +PP P P
Sbjct: 6 YKSPPPPSPVPKPPYYYQSPPPPSPIPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPP 185
Query: 502 APYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDPLPRWY 549
PY ++ P+P P + PPP P P P +Y
Sbjct: 186 PPYYYKSPPPP-SPVPK------PPYYYHS-----PPPPSPSPPPPYY 293
Score = 40.4 bits (93), Expect = 0.005
Identities = 34/123 (27%), Positives = 41/123 (32%), Gaps = 13/123 (10%)
Frame = +3
Query: 440 PQMTAPQNPNY-QSPRPQGPAPYYPPLYQPLYNLQQLSQQPYY----------PQQPYQQ 488
P P+ P Y QSP P P P P Y PYY P PY
Sbjct: 21 PPSPVPKPPYYYQSPPPPSPIPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYY 200
Query: 489 RPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLP--SLLAQNLVQTIPPPRIPDPLP 546
+ PP P+P Y+ P P Y + P + PPP P P P
Sbjct: 201 KSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPP 380
Query: 547 RWY 549
+Y
Sbjct: 381 PYY 389
>TC233960 similar to UP|OPSD_SEPOF (O16005) Rhodopsin, partial (10%)
Length = 862
Score = 43.9 bits (102), Expect = 4e-04
Identities = 36/112 (32%), Positives = 42/112 (37%), Gaps = 3/112 (2%)
Frame = +2
Query: 396 GVSSSGNKKFGNGYPKRNAQEVGMVAHGGPQPVYSNHPFVANITPQMTAPQNPNYQSPRP 455
G +G+GYP + G G P P S P+ + PQ P Y S P
Sbjct: 500 GAPYGSQAPYGSGYPPQG----GYPPQGYPAPYGSQAPYGSGYPPQGGYPPADQYGSQAP 667
Query: 456 QGPAPYYPPL--YQPL-YNLQQLSQQPYYPQQPYQQRPYNPPQQQPRPQAPY 504
G YPP Y P Y Q Y PQ Y + PP Q QAPY
Sbjct: 668 YGSG--YPPQGGYPPQGYPSPQAYGSGYPPQGGYPPQGGYPPADQYGSQAPY 817
>TC224792 homologue to UP|Q39865 (Q39865) Hydroxyproline-rich glycoprotein
(Fragment), partial (86%)
Length = 688
Score = 43.1 bits (100), Expect = 7e-04
Identities = 38/143 (26%), Positives = 45/143 (30%), Gaps = 5/143 (3%)
Frame = +2
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNYQS----PRPQGPAPYYPPLYQPLYNLQQLSQQPY 480
P P Y P P +P P Y P P P PYY P Y Q
Sbjct: 179 PPPYYYKSP-----PPPSPSPPPPYYYHSPPPPSPSPPPPYYYHSPPPPYYYQSPPPPSP 343
Query: 481 YPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPPR 540
P PY + PP P P Y P P Y T PPP
Sbjct: 344 TPHPPYYYKSPPPPTSHPPPPYHYVSPPPPSPSPPPPYHY--------------TSPPPP 481
Query: 541 IPDPLPRW-YRPDLHCIYHQGAP 562
P P P++ Y+ +Y +P
Sbjct: 482 SPAPAPKYIYKSPPPPVYIYASP 550
Score = 37.0 bits (84), Expect = 0.050
Identities = 31/110 (28%), Positives = 39/110 (35%)
Frame = +2
Query: 440 PQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYYPQQPYQQRPYNPPQQQPR 499
P+ P +P Y P P P PP P Y + S P P P ++PP P
Sbjct: 107 PKKYPPVSPPYHYPSPPPPPSPSPP---PPYYYK--SPPPPSPSPPPPYYYHSPPPPSPS 271
Query: 500 PQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDPLPRWY 549
P PY + P P Y + PPP P P P +Y
Sbjct: 272 PPPPYYYHS-----PPPPYYYQS--------------PPPPSPTPHPPYY 364
>TC221951 UP|NO75_SOYBN (P08297) Early nodulin 75 precursor (N-75) (NGM-75),
complete
Length = 1179
Score = 42.7 bits (99), Expect = 0.001
Identities = 30/104 (28%), Positives = 43/104 (40%), Gaps = 5/104 (4%)
Frame = +1
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQN---PNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQ 478
H P P Y P P+ P P YQ P + P Y PP +P Q ++
Sbjct: 388 HEKPPPEYE--PPHEKPPPEYQPPHEKPPPEYQPPHEKPPPEYQPPHEKPPPEHQPPHEK 561
Query: 479 PYYPQQPYQQRP--YNPPQQQPRPQAPYNQQNQKQQFDPLPMTY 520
P Q P+++ P Y PP ++P P+ Y +K + P Y
Sbjct: 562 PPEHQPPHEKPPPEYQPPHEKPPPE--YQPPQEKPPHEKPPPEY 687
Score = 37.0 bits (84), Expect = 0.050
Identities = 20/69 (28%), Positives = 31/69 (43%), Gaps = 10/69 (14%)
Frame = +1
Query: 448 PNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYYPQQPYQQRP--------YNPPQQQPR 499
P YQ P + P Y PP +P + QP + + P + +P Y PP ++P
Sbjct: 598 PEYQPPHEKPPPEYQPPQEKPPHEKPPPEYQPPHEKPPPEHQPPHEKPPPVYPPPYEKPP 777
Query: 500 P--QAPYNQ 506
P + PY +
Sbjct: 778 PVYEPPYEK 804
Score = 36.6 bits (83), Expect = 0.065
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +1
Query: 433 PFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYYPQQPYQQRPYN 492
P +AN+ P+ P + P + P Y PP Y P + QP + + P + P
Sbjct: 64 PVLANLKPRFFYEPPPIEKPPTYEPPPFYKPPYYPPPVHHPPPEYQPPHEKTPPEYLP-- 237
Query: 493 PPQQQPRPQAPYNQQNQKQQFDP 515
PP ++P P+ + ++ P
Sbjct: 238 PPHEKPPPEYLPPHEKPPPEYQP 306
Score = 36.6 bits (83), Expect = 0.065
Identities = 19/75 (25%), Positives = 30/75 (39%), Gaps = 7/75 (9%)
Frame = +1
Query: 448 PNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPYYPQQPYQQRP-------YNPPQQQPRP 500
P Y P + P Y PP +P + QP + + P Q P Y PP ++P P
Sbjct: 259 PEYLPPHEKPPPEYQPPHEKPPHENPPPEHQPPHEKPPEHQPPHEKPPPEYEPPHEKPPP 438
Query: 501 QAPYNQQNQKQQFDP 515
+ + ++ P
Sbjct: 439 EYQPPHEKPPPEYQP 483
Score = 31.6 bits (70), Expect = 2.1
Identities = 32/117 (27%), Positives = 44/117 (37%), Gaps = 12/117 (10%)
Frame = +1
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQN---PNYQSPRPQGPAPYYPP------LYQPLYNL 472
H P P Y PQ P P YQ P + P + PP +Y P Y
Sbjct: 616 HEKPPPEYQ--------PPQEKPPHEKPPPEYQPPHEKPPPEHQPPHEKPPPVYPPPY-- 765
Query: 473 QQLSQQPYYPQQPYQQRP---YNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPS 526
+ P + PY++ P Y PP ++P P + ++P P YG PS
Sbjct: 766 ---EKPPPVYEPPYEKPPPVVYPPPHEKPPIYEP-PPLEKPPVYNPPP--YGRYPPS 918
>TC214303 similar to UP|Q9T0K5 (Q9T0K5) Extensin-like protein, partial (18%)
Length = 1014
Score = 42.7 bits (99), Expect = 0.001
Identities = 38/129 (29%), Positives = 47/129 (35%), Gaps = 11/129 (8%)
Frame = +2
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNP------NYQSPRPQGP--APYYPPLYQPLYNLQ 473
H P PVYS P + P + +P P SP P P APY+PP
Sbjct: 152 HSPPPPVYSPPPPPPSPPPCIESPPPPPPPPPCEEHSPPPPSPHSAPYHPP--------- 304
Query: 474 QLSQQPYYPQQPYQQRPYNPPQQQPRPQAP---YNQQNQKQQFDPLPMTYGALLPSLLAQ 530
P P P Q +PP P P P YN P P+ Y LP ++
Sbjct: 305 ---PSPSPPPPPIQYN--SPPPPSPPPPTPVYHYNSPPPPSSPPPAPV-YEGPLPPVIGV 466
Query: 531 NLVQTIPPP 539
+ PPP
Sbjct: 467 SYASPPPPP 493
Score = 34.3 bits (77), Expect = 0.32
Identities = 36/144 (25%), Positives = 48/144 (33%), Gaps = 6/144 (4%)
Frame = +2
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNYQSPRPQGPA-PYY-----PPLYQPLYNLQQLSQQ 478
P PVYS +P P P SP P P PY PP++ P +
Sbjct: 11 PPPVYSPPAPPPTYSPPPPPPSPPPPHSPPPPPPVYPYLSPPPPPPVHSPPPPVYSPPPP 190
Query: 479 PYYPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPP 538
P P + P PP +P + P P + P + N + PP
Sbjct: 191 PPSPPPCIESPPPPPPPPPCEEHSPPPPSPHSAPYHPPPSP--SPPPPPIQYN---SPPP 355
Query: 539 PRIPDPLPRWYRPDLHCIYHQGAP 562
P P P P +YH +P
Sbjct: 356 PSPPPPTP---------VYHYNSP 400
Score = 30.4 bits (67), Expect = 4.7
Identities = 25/91 (27%), Positives = 32/91 (34%), Gaps = 1/91 (1%)
Frame = +2
Query: 455 PQGPAPYYPPLYQPLYNLQQLSQQPYYPQQPYQQRPYNPPQQQPRPQAPY-NQQNQKQQF 513
P P Y PP P Y+ P P P++PP P P PY +
Sbjct: 5 PPPPPVYSPPAPPPTYSPP--------PPPPSPPPPHSPP--PPPPVYPYLSPPPPPPVH 154
Query: 514 DPLPMTYGALLPSLLAQNLVQTIPPPRIPDP 544
P P Y P +++ PPP P P
Sbjct: 155 SPPPPVYSPPPPPPSPPPCIESPPPPPPPPP 247
>TC204046 UP|Q39835 (Q39835) Extensin, complete
Length = 1627
Score = 42.0 bits (97), Expect = 0.002
Identities = 37/139 (26%), Positives = 49/139 (34%), Gaps = 10/139 (7%)
Frame = +1
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNPNYQSPRP---QGPAPYY-----PPLYQPLYNLQ 473
H P P Y + P P+ + P Y SP P P PYY PP + P
Sbjct: 262 HSPPPPYYYHSP----PPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYY 429
Query: 474 QLSQQP--YYPQQPYQQRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQN 531
S P + P PY PP+ P P Y+ + P P Y
Sbjct: 430 YHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYY----------- 576
Query: 532 LVQTIPPPRIPDPLPRWYR 550
+ PPP+ P P +Y+
Sbjct: 577 --HSPPPPKHSPPPPYYYK 627
Score = 38.9 bits (89), Expect = 0.013
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 2/131 (1%)
Frame = +1
Query: 422 HGGPQPVYSNHPFVANITPQMTAPQNPNYQSPRPQGPAPY-YPPLYQPLYNLQQLSQQPY 480
H P P Y + P P+ + P Y+SP P PY YP P+Y +
Sbjct: 550 HSPPPPYYYHSP----PPPKHSPPPPYYYKSPPPPPKKPYKYPSPPPPVYKYKS------ 699
Query: 481 YPQQPYQ-QRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPP 539
P PY+ P PP + P P P + P P Y P + PP
Sbjct: 700 -PPPPYKYPSPPPPPYKYPSPPPPVYKYK-----SPPPPVYKYKSPPPPYKYPSPPPPPY 861
Query: 540 RIPDPLPRWYR 550
+ P P P Y+
Sbjct: 862 KYPSPPPPVYK 894
Score = 36.6 bits (83), Expect = 0.065
Identities = 34/121 (28%), Positives = 42/121 (34%), Gaps = 11/121 (9%)
Frame = +1
Query: 440 PQMTAPQNPNYQSPRP---QGPAPYY-----PPLYQPLYNLQQLSQQPYYPQQPYQQRPY 491
P T N Y SP P P PYY PP + P PYY P
Sbjct: 64 PSQTLADNYIYSSPPPPKHSPPPPYYYHSPPPPKHSP--------PPPYYYHSP------ 201
Query: 492 NPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLP---SLLAQNLVQTIPPPRIPDPLPRW 548
PP+ P P Y+ + P P Y + P S + PPP+ P P +
Sbjct: 202 PPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYYYHSPPPPKHSPPPPYY 381
Query: 549 Y 549
Y
Sbjct: 382 Y 384
Score = 35.8 bits (81), Expect = 0.11
Identities = 35/130 (26%), Positives = 46/130 (34%), Gaps = 4/130 (3%)
Frame = +1
Query: 425 PQPVYSNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPY---Y 481
P PVY + + P P Y+ P P P YP P+Y + Y
Sbjct: 877 PPPVYKYKSPPPPVYKYKSPP--PPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVYKYKS 1050
Query: 482 PQQPYQ-QRPYNPPQQQPRPQAPYNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPPR 540
P PY+ P PP + P P P K + P P Y + P PP +
Sbjct: 1051PPPPYKYPSPPPPPYKYPSPPPPV----YKYKSPPPPYKYPSPPP-----------PPYK 1185
Query: 541 IPDPLPRWYR 550
P P P Y+
Sbjct: 1186YPSPPPPVYK 1215
Score = 33.5 bits (75), Expect = 0.55
Identities = 29/107 (27%), Positives = 38/107 (35%), Gaps = 4/107 (3%)
Frame = +1
Query: 448 PNYQSPRPQGPAPYYPPLYQPLYNLQQLSQQPY---YPQQPYQ-QRPYNPPQQQPRPQAP 503
P Y+ P P P YP P+Y + Y P PY+ P PP + P P P
Sbjct: 706 PPYKYPSPPPPPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPP 885
Query: 504 YNQQNQKQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDPLPRWYR 550
+ P P Y P + PP + P P P Y+
Sbjct: 886 VYKYK-----SPPPPVYKYKSPPPPYKYPSPPPPPYKYPSPPPPVYK 1011
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,776,689
Number of Sequences: 63676
Number of extensions: 794408
Number of successful extensions: 8347
Number of sequences better than 10.0: 298
Number of HSP's better than 10.0 without gapping: 6231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7377
length of query: 1155
length of database: 12,639,632
effective HSP length: 108
effective length of query: 1047
effective length of database: 5,762,624
effective search space: 6033467328
effective search space used: 6033467328
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Medicago: description of AC145024.28