BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144806.12 - phase: 1 /pseudo
(316 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC230189 similar to UP|Q9SCR0 (Q9SCR0) Scarecrow-like 7 (SCL7), ... 243 8e-65
BQ296629 similar to GP|17064924|gb SCARECROW gene regulator {Ara... 192 2e-49
TC230188 similar to UP|Q8W4I8 (Q8W4I8) SCARECROW gene regulator,... 117 3e-45
TC204219 similar to UP|Q7Y1B6 (Q7Y1B6) GAI-like protein, partial... 170 7e-43
TC228139 similar to UP|Q8GVE1 (Q8GVE1) Chitin-inducible gibberel... 168 3e-42
TC226166 similar to UP|O23724 (O23724) GAI protein, partial (70%) 160 5e-40
TC228546 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partia... 146 1e-35
TC227564 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-... 140 6e-34
TC227563 similar to PIR|E96542|E96542 scarecrow-like protein [im... 106 7e-34
TC209743 similar to PIR|E86347|E86347 scarecrow-like 1 protein F... 131 3e-31
TC219179 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-... 131 5e-31
CO981442 126 1e-29
TC226165 GAI1 [Glycine max] 124 4e-29
TC231668 homologue to UP|Q9AVK4 (Q9AVK4) SCARECROW, partial (28%) 124 7e-29
TC220187 similar to PIR|E86347|E86347 scarecrow-like 1 protein F... 119 1e-27
TC226882 similar to UP|O81316 (O81316) F6N15.20 protein (Scarecr... 105 2e-23
TC220762 similar to UP|Q6S5L6 (Q6S5L6) GAI protein, partial (27%) 105 3e-23
TC229255 similar to UP|Q7X9T5 (Q7X9T5) SCARECROW-like protein, p... 102 3e-23
TC226881 similar to UP|O81316 (O81316) F6N15.20 protein (Scarecr... 103 1e-22
TC217781 similar to UP|O81316 (O81316) F6N15.20 protein (Scarecr... 97 7e-21
>TC230189 similar to UP|Q9SCR0 (Q9SCR0) Scarecrow-like 7 (SCL7), partial
(25%)
Length = 973
Score = 243 bits (620), Expect = 8e-65
Identities = 129/159 (81%), Positives = 139/159 (87%), Gaps = 4/159 (2%)
Frame = +3
Query: 162 LDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNM 221
LDE ++V+ ALRLAKSLNP+IVTLGEYEAS+T RVGFV RF TAF YF+A FESLEPN+
Sbjct: 3 LDEPPSAVDTALRLAKSLNPRIVTLGEYEASVT-RVGFVNRFRTAFKYFSAVFESLEPNL 179
Query: 222 ALDSPERFQVESLLLGRRIDGVIG---VRERMEDKEQWKVLMENCGFESVGLSHYAISQA 278
A DSPERFQVESLLLGRRI VIG VRE MEDKEQW+VLME GFESV LSHYAISQA
Sbjct: 180 AADSPERFQVESLLLGRRIAAVIGPGAVRESMEDKEQWRVLMERAGFESVSLSHYAISQA 359
Query: 279 KILLWNYSYSSLYSLVESQ-PAFLSLAWKDVPLLTVSSW 316
KILLWNYSYSSL+SLVES+ P FLSLAWKDVPLLTVSSW
Sbjct: 360 KILLWNYSYSSLFSLVESKPPGFLSLAWKDVPLLTVSSW 476
>BQ296629 similar to GP|17064924|gb SCARECROW gene regulator {Arabidopsis
thaliana}, partial (19%)
Length = 437
Score = 192 bits (487), Expect = 2e-49
Identities = 93/113 (82%), Positives = 105/113 (92%)
Frame = +1
Query: 18 TTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQA 77
++WEELTLSYKALNDACPYSKFAHLTANQAILEATE ++NIHI+DFGIVQGIQWAALLQA
Sbjct: 97 SSWEELTLSYKALNDACPYSKFAHLTANQAILEATENASNIHILDFGIVQGIQWAALLQA 276
Query: 78 FATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPI 130
FATR+SGKPN + ISGIPA++LG SP S+SATGNRLS+FA+LL LNF FTPI
Sbjct: 277 FATRASGKPNKITISGIPAVSLGPSPGPSLSATGNRLSDFARLLDLNFVFTPI 435
>TC230188 similar to UP|Q8W4I8 (Q8W4I8) SCARECROW gene regulator, partial
(18%)
Length = 393
Score = 117 bits (294), Expect(2) = 3e-45
Identities = 59/68 (86%), Positives = 61/68 (88%), Gaps = 1/68 (1%)
Frame = +2
Query: 247 RERMEDKEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVES-QPAFLSLAW 305
RE MEDKEQW+VLME GFESV LSHYAISQAKILLWNYSYSSL+SLVES P FLSLAW
Sbjct: 188 RESMEDKEQWRVLMERAGFESVSLSHYAISQAKILLWNYSYSSLFSLVESTPPGFLSLAW 367
Query: 306 KDVPLLTV 313
KDVPLLTV
Sbjct: 368 KDVPLLTV 391
Score = 82.0 bits (201), Expect(2) = 3e-45
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = +1
Query: 196 RVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIG 245
R GFV RF+TAF YF+A FESLEPN+A DSPERFQVESLLLGRRI VIG
Sbjct: 19 RFGFVNRFKTAFKYFSAVFESLEPNLAADSPERFQVESLLLGRRIAAVIG 168
>TC204219 similar to UP|Q7Y1B6 (Q7Y1B6) GAI-like protein, partial (50%)
Length = 1208
Score = 170 bits (431), Expect = 7e-43
Identities = 111/296 (37%), Positives = 165/296 (55%), Gaps = 11/296 (3%)
Frame = +1
Query: 32 DACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRI 91
++CPY KFAH TANQAILEA + +H++DFG+ QG+QW AL+QA A R G P + R+
Sbjct: 22 ESCPYLKFAHFTANQAILEAFATAGKVHVIDFGLKQGMQWPALMQALALRPGGPP-TFRL 198
Query: 92 SGI-PAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTP-ILTPIELLDESSFCIQPDEA 149
+GI P T + + G +L++ A+ +G+ FEF + + LD I+P EA
Sbjct: 199 TGIGPPQPDNTDALQQV---GWKLAQLAQNIGVQFEFRGFVCNSLADLDPKMLEIRPGEA 369
Query: 150 LAVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNY 209
+AVN + +L+ +L SV+K L K + PKIVT+ E EA+ GF++RF A +Y
Sbjct: 370 VAVNSVFELHRML-ARPGSVDKVLDTVKKIKPKIVTIVEQEAN-HNGPGFLDRFTEALHY 543
Query: 210 FAAFFESLE---PNMALDSPER-FQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLM 260
+++ F+SLE + L SP + + L LGR+I V+ ER E QW+ +
Sbjct: 544 YSSLFDSLEGSSSSTGLGSPNQDLLMSELYLGRQICNVVANEGADRVERHETLSQWRGRL 723
Query: 261 ENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
++ GF+ V L A QA +LL ++ Y VE L L W PL+ S+W
Sbjct: 724 DSAGFDPVHLGSNAFKQASMLLALFAGGDGYR-VEENNGCLMLGWHTRPLIATSAW 888
>TC228139 similar to UP|Q8GVE1 (Q8GVE1) Chitin-inducible
gibberellin-responsive protein, partial (47%)
Length = 1497
Score = 168 bits (426), Expect = 3e-42
Identities = 116/294 (39%), Positives = 160/294 (53%), Gaps = 13/294 (4%)
Frame = +1
Query: 36 YSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIP 95
Y KF ++ AN AI +A ++IHI+DF I QG QW LLQA A R G P+ VRI+GI
Sbjct: 4 YLKFGYMAANGAIAQACRNEDHIHIIDFQIAQGTQWMTLLQALAARPGGAPH-VRITGID 180
Query: 96 AMALGTSPVSSISATGNRLSEFAKLLGLNFEF--TPILTP---IELLDESSFCIQPDEAL 150
+ + G RL+ ++ G+ EF P+ P E+LD I+P EAL
Sbjct: 181 DPVSKYARGDGLEVVGKRLALMSEKFGIPVEFHGVPVFAPNVTREMLD-----IRPGEAL 345
Query: 151 AVNFMLQLYNLLDEN---TNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAF 207
AVNF LQL++ DE+ +N + LRL +SL+PK+ TL E E++ T F RF
Sbjct: 346 AVNFPLQLHHTADESVHVSNPRDGLLRLVRSLSPKVTTLVEQESN-TNTTPFFNRFIETL 522
Query: 208 NYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGV--RERMEDKE---QWKVLMEN 262
+Y+ A FES++ + DS ER VE L R I +I +ER+E E +WK ++
Sbjct: 523 DYYLAIFESIDVTLPRDSKERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLKM 702
Query: 263 CGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
GF+ LS Y S + LL YS Y+LVE A L L WKD L++ S+W
Sbjct: 703 AGFQQCPLSSYVNSVIRSLL--MCYSEHYTLVEKDGAML-LGWKDRNLISASAW 855
>TC226166 similar to UP|O23724 (O23724) GAI protein, partial (70%)
Length = 1613
Score = 160 bits (406), Expect = 5e-40
Identities = 102/291 (35%), Positives = 156/291 (53%), Gaps = 6/291 (2%)
Frame = +1
Query: 32 DACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRI 91
+ CPY KFAH TANQ ILEA +G N +H++DFGI QG+QW AL+QA A R+ G P R+
Sbjct: 328 ETCPYLKFAHFTANQVILEAFQGKNRVHVIDFGINQGMQWPALMQALAVRTGGPP-VFRL 504
Query: 92 SGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTP-ILTPIELLDESSFCIQPDEAL 150
+GI A S + G +L++ A+ + + FE+ + + LD S ++ DE++
Sbjct: 505 TGIGPPAADNS--DHLQEVGWKLAQLAEEINVQFEYRGFVANSLADLDASMLDLREDESV 678
Query: 151 AVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYF 210
AVN + + + LL +VEK L + + + P+I+T+ E EA+ + FV+RF + +Y+
Sbjct: 679 AVNSVFEFHKLL-ARPGAVEKVLSVVRQIRPEILTVVEQEAN-HNGLSFVDRFTESLHYY 852
Query: 211 AAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGF 265
+ F+SLE + +P + + LG++I V+ ER E QW+ + GF
Sbjct: 853 STLFDSLEGSPV--NPNDKAMSEVYLGKQICNVVACEGMDRVERHETLNQWRNRFGSTGF 1026
Query: 266 ESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
V L A QA +LL + Y VE L L W PL+ S W
Sbjct: 1027SPVHLGSNAYKQASMLLSLFGGGDGYR-VEENNGCLMLGWHTRPLIATSVW 1176
>TC228546 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial (60%)
Length = 1493
Score = 146 bits (368), Expect = 1e-35
Identities = 102/308 (33%), Positives = 152/308 (49%), Gaps = 10/308 (3%)
Frame = +3
Query: 19 TWEELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAF 78
T +L L CPY KFA+ +AN I EA + I I+DF I QG QW L+QA
Sbjct: 159 TSNDLMTYMHILYQICPYWKFAYTSANAVIGEAMLNESRIRIIDFQIAQGTQWLLLIQAL 338
Query: 79 ATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLD 138
A+R G P V ++G+ + + G RLS++AK G+ FEF L+
Sbjct: 339 ASRPGGPP-FVHVTGVDDSQSFHARGGGLHIVGKRLSDYAKSCGVPFEFHSAAMCGSELE 515
Query: 139 ESSFCIQPDEALAVNFMLQLYNLLDENT---NSVEKALRLAKSLNPKIVTLGEYEASLTT 195
+ IQP EAL VNF L+++ DE+ N ++ LRL KSL+PK+VTL E E++ T
Sbjct: 516 LENLVIQPGEALVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNT 695
Query: 196 RVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR--ERMEDK 253
F +RF +Y+ A FES++ + D +R E + R I ++ ER+E
Sbjct: 696 S-PFFQRFVETLSYYTAMFESIDVALPRDDKQRINAEQHCVARDIVNMVACEGDERLERH 872
Query: 254 E---QWKVLMENCGFESVGLSHYAISQAKILL--WNYSYSSLYSLVESQPAFLSLAWKDV 308
E +W+ GF LS + + +L +N +Y ++ + L L WK
Sbjct: 873 ELLGKWRSRFSMAGFAPCPLSSSVTAAVRNMLNEFNENYR-----LQHRDGALYLGWKSR 1037
Query: 309 PLLTVSSW 316
+ T S+W
Sbjct: 1038AMCTSSAW 1061
>TC227564 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-like
(Phytochrome A signal transduction 1 protein), partial
(53%)
Length = 1107
Score = 140 bits (354), Expect = 6e-34
Identities = 96/267 (35%), Positives = 136/267 (49%), Gaps = 8/267 (2%)
Frame = +3
Query: 58 IHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEF 117
+HIVDF I QG QW +L+QA A R G P +RISG+ + + G RLS
Sbjct: 6 VHIVDFQIGQGTQWVSLIQALARRPVGPPK-IRISGVDDSYSAYARRGGLDIVGKRLSAL 182
Query: 118 AKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLDENTNS---VEKALR 174
A+ + FEF + P+ + ++P EA+AVNF + L+++ DE+ NS ++ LR
Sbjct: 183 AQSCHVPFEFNAVRVPVTEVQLEDLELRPYEAVAVNFAISLHHVPDESVNSHNHRDRLLR 362
Query: 175 LAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESL 234
LAK L+PK+VTL E E S T F++RF NY+ A FES++ + + ER VE
Sbjct: 363 LAKQLSPKVVTLVEQEFS-TNNAPFLQRFVETMNYYLAVFESIDTVLPREHKERINVEQH 539
Query: 235 LLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSS 289
L R + +I ER E +W++ GF LS S K LL SY
Sbjct: 540 CLAREVVNLIACEGEERVERHELLNKWRMRFTKAGFTPYPLSSVINSSIKDLL--QSYHG 713
Query: 290 LYSLVESQPAFLSLAWKDVPLLTVSSW 316
Y+L E A L L W + L+ +W
Sbjct: 714 HYTLEERDGA-LFLGWMNQVLVASCAW 791
>TC227563 similar to PIR|E96542|E96542 scarecrow-like protein [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(71%)
Length = 1274
Score = 106 bits (264), Expect(2) = 7e-34
Identities = 77/239 (32%), Positives = 113/239 (47%), Gaps = 8/239 (3%)
Frame = +2
Query: 86 PNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQ 145
P +RI+G + + G RLS A+ + FEF I ++ +Q
Sbjct: 449 PPKIRITGFDDSTSAYAREGGLEIVGARLSRLAQSYNVPFEFHAIRAAPTEVELKDLALQ 628
Query: 146 PDEALAVNFMLQLYNLLDE---NTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVER 202
P EA+AVNF + L+++ DE + N ++ +RLAK L+PKIVTL E E S T + F R
Sbjct: 629 PGEAIAVNFAMMLHHVPDECVDSRNHRDRLVRLAKCLSPKIVTLVEQE-SHTNNLPFFPR 805
Query: 203 FETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWK 257
F NY+ A FES++ + + ER VE L R + +I ER E ++W+
Sbjct: 806 FVETMNYYLAIFESIDVALPREHKERINVEQHCLAREVVNLIACEGAERVERHELLKKWR 985
Query: 258 VLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
GF L+ + K L SY Y+L E A L L W + L+T +W
Sbjct: 986 SRFTMAGFTPYPLNSFVTCSIKNL--QQSYQGHYTLEERDGA-LCLGWMNQVLITSCAW 1153
Score = 55.5 bits (132), Expect(2) = 7e-34
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = +3
Query: 19 TWEELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAF 78
T EL L + CPY KF +++AN AI E + + +HI+DF I QGIQW +L+ +
Sbjct: 249 TGSELLSHMHLLYEICPYLKFGYMSANGAIAEVMKEESEVHIIDFQINQGIQWVSLIPSC 428
Query: 79 ATRSSGKP 86
++ P
Sbjct: 429 CWQTWSTP 452
>TC209743 similar to PIR|E86347|E86347 scarecrow-like 1 protein F24J8.8 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(47%)
Length = 1078
Score = 131 bits (330), Expect = 3e-31
Identities = 86/281 (30%), Positives = 138/281 (48%), Gaps = 8/281 (2%)
Frame = +1
Query: 44 ANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSP 103
AN AI E +HI+DF I QG Q+ L+Q A+ G+P VR++ +
Sbjct: 13 ANGAIAEVVRDEKKVHIIDFDISQGTQYITLIQTLASMP-GRPPHVRLTAVDDPESVQRS 189
Query: 104 VSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLD 163
+ I+ G RL + A+ L L FEF + + + +S +P EAL VNF QL+++ D
Sbjct: 190 IGGINIIGQRLEKLAEELRLPFEFRAVASRTSNVTQSMLNCRPGEALVVNFAFQLHHMRD 369
Query: 164 ENTNSV---EKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPN 220
E ++V ++ LR+ KSLNPKIVT+ E + + T F+ RF +NY++A F +L+
Sbjct: 370 ETVSTVNERDQLLRMVKSLNPKIVTVVEQDMNTNTS-PFLPRFIETYNYYSAVFNTLDAT 546
Query: 221 MALDSPERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAI 275
+ +S +R VE L + I ++ ER E +W+ + GF +S
Sbjct: 547 LPRESQDRMNVERQCLAKDIVNIVACEGEERIERYEVAGKWRARLSMAGFTPSPMSTNVR 726
Query: 276 SQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
+ L+ Y + + E L W+D L+ S+W
Sbjct: 727 EAIRNLIIK-QYCDKFKIKEEMGG-LHFGWEDKNLIVASAW 843
>TC219179 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-like
(Phytochrome A signal transduction 1 protein), partial
(52%)
Length = 1025
Score = 131 bits (329), Expect = 5e-31
Identities = 94/269 (34%), Positives = 134/269 (48%), Gaps = 8/269 (2%)
Frame = +3
Query: 56 NNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLS 115
+ +HI+DF I QG QW L+QAFA R G P+ +RI+GI + + G RLS
Sbjct: 9 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPH-IRITGIDDSTSAYARGGGLHIVGRRLS 185
Query: 116 EFAKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLDENT---NSVEKA 172
+ A+ + FEF + + ++P EALAVNF L+++ DE+ N ++
Sbjct: 186 KLAEHFKVPFEFHAAAISGFDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRL 365
Query: 173 LRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVE 232
LRL +SL+PK+VTL E E++ T F RF NY+ A FES++ + + ER VE
Sbjct: 366 LRLVRSLSPKVVTLVEQESN-TNTAAFFPRFLETLNYYTAMFESIDVTLPREHKERINVE 542
Query: 233 SLLLGRRIDGVIGVR--ERMEDKE---QWKVLMENCGFESVGLSHYAISQAKILLWNYSY 287
L R + +I ER+E E +W+ GF LS K LL N Y
Sbjct: 543 QHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLEN--Y 716
Query: 288 SSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
S Y L E A L L W + L+ +W
Sbjct: 717 SDRYRLEERDGA-LYLGWMNRDLVASCAW 800
>CO981442
Length = 791
Score = 126 bits (316), Expect = 1e-29
Identities = 86/257 (33%), Positives = 125/257 (48%), Gaps = 8/257 (3%)
Frame = -2
Query: 58 IHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEF 117
IHI+DFGI G +W AL+ + RS G P +RI+GI G P + TG RL+ F
Sbjct: 769 IHIIDFGIRYGFKWPALISRLSRRSGGPPK-LRITGIDVPQPGLRPQERVLETGRRLANF 593
Query: 118 AKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLDEN---TNSVEKALR 174
K + FEF I + + I+P+E +AVN + Q +LLDE NS + LR
Sbjct: 592 CKRFNVPFEFNAIAQRWDTIRVEDLKIEPNEFVAVNCLFQFEHLLDETVVLNNSRDAVLR 413
Query: 175 LAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESL 234
L K+ NP I G S FV RF A ++ A F+ L+ N+A P R E
Sbjct: 412 LIKNANPDIFVHGIVNGSYDVPF-FVSRFREALFHYTALFDMLDTNVARQDPMRLMFEKE 236
Query: 235 LLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSS 289
L GR I +I ER + +QW++ GF + L H I + K L + ++++
Sbjct: 235 LFGREIVNIIACEGFERVERPQTYKQWQLRNMRNGFRLLPLDHRIIGKLKDRLRDDAHNN 56
Query: 290 LYSLVESQPAFLSLAWK 306
+ L+E ++ WK
Sbjct: 55 NF-LLEVDGDWVLQGWK 8
>TC226165 GAI1 [Glycine max]
Length = 1313
Score = 124 bits (312), Expect = 4e-29
Identities = 70/181 (38%), Positives = 111/181 (60%), Gaps = 1/181 (0%)
Frame = +3
Query: 32 DACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRI 91
+ CPY KFAH TANQAILEA +G N +H++DFGI QG+QW AL+QA A R+ G P R+
Sbjct: 783 ETCPYLKFAHFTANQAILEAFQGKNRVHVIDFGINQGMQWPALMQALALRNDGPP-VFRL 959
Query: 92 SGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTP-ILTPIELLDESSFCIQPDEAL 150
+GI A S + G +L++ A+ + + FE+ + + LD S ++ DE++
Sbjct: 960 TGIGPPAADNS--DHLQEVGWKLAQLAERIHVQFEYRGFVANSLADLDASMLDLREDESV 1133
Query: 151 AVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYF 210
AVN + + + LL +VEK L + + + P+I+T+ E EA+ + FV+RF + +Y+
Sbjct: 1134AVNSVFEFHKLL-ARPGAVEKVLSVVRQIRPEILTVVEQEAN-HNGLSFVDRFTESLHYY 1307
Query: 211 A 211
+
Sbjct: 1308S 1310
>TC231668 homologue to UP|Q9AVK4 (Q9AVK4) SCARECROW, partial (28%)
Length = 706
Score = 124 bits (310), Expect = 7e-29
Identities = 88/233 (37%), Positives = 128/233 (54%), Gaps = 5/233 (2%)
Frame = +3
Query: 89 VRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQPDE 148
VR++G LGTS + ++ ATG RLS+FA LGL FEF P+ + LD + E
Sbjct: 18 VRLTG-----LGTS-MEALEATGKRLSDFANKLGLPFEFFPVAEKVGNLDPERLNVSKTE 179
Query: 149 ALAVNFML-QLYNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAF 207
A+AV+++ LY++ +TN+ L L + L PK+VT+ E + S T F+ RF A
Sbjct: 180 AVAVHWLQHSLYDVTGSDTNT----LWLLQRLAPKVVTVVEQDLSNTG--SFLGRFVEAI 341
Query: 208 NYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGV----RERMEDKEQWKVLMENC 263
+Y++A F+SL + +S ER VE LL R I V+ V R W+ ++ C
Sbjct: 342 HYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQC 521
Query: 264 GFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
GF + L+ A +QA +LL + S Y+LVE L L WKD+ LLT S+W
Sbjct: 522 GFRGISLAGNAATQASLLLGMFP-SEGYTLVEDN-GILKLGWKDLCLLTASAW 674
>TC220187 similar to PIR|E86347|E86347 scarecrow-like 1 protein F24J8.8 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(39%)
Length = 810
Score = 119 bits (299), Expect = 1e-27
Identities = 77/221 (34%), Positives = 113/221 (50%), Gaps = 8/221 (3%)
Frame = +3
Query: 104 VSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLD 163
V + G RL + A+ LGL FEF + + ++ S PDEAL VNF QL+++ D
Sbjct: 36 VGGLQNIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCSPDEALVVNFAFQLHHMPD 215
Query: 164 EN---TNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPN 220
E+ N ++ LRL KSLNPK+VT+ E + + T F+ RF A+NY++A FESL+
Sbjct: 216 ESVSTANERDQLLRLVKSLNPKLVTVVEQDVN-TNTTPFLPRFVEAYNYYSAVFESLDAT 392
Query: 221 MALDSPERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAI 275
+ +S +R VE L R I V+ ER E +W+ M GF S +S
Sbjct: 393 LPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVT 572
Query: 276 SQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
+ + L+ Y Y + E A L W+D L+ S+W
Sbjct: 573 DEIRKLI-KTVYCDRYKIKEEMGA-LHFGWEDKNLIVASAW 689
>TC226882 similar to UP|O81316 (O81316) F6N15.20 protein (Scarecrow-like 6)
(SCL6) (AT4g00150/F6N15_20), partial (32%)
Length = 1423
Score = 105 bits (263), Expect = 2e-23
Identities = 88/302 (29%), Positives = 148/302 (48%), Gaps = 11/302 (3%)
Frame = +3
Query: 26 SYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGK 85
+YK+ ++ P +FA+ T NQA++EA E S+ IH++DF I G+QW++ +Q A RSSG
Sbjct: 135 AYKSFSEISPVLQFANFTCNQALIEAVERSDRIHVIDFDIGFGVQWSSFMQEIALRSSGA 314
Query: 86 PNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQ 145
P S++++ I ++ T ++ T L ++AK + ++FEF + IE L+ S +
Sbjct: 315 P-SLKVTAI--VSPSTCDEVELNFTRENLIQYAKDINVSFEFN--VLSIESLNSPSCPLL 479
Query: 146 ----PDEALAVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIVT-----LGEYEASLTTR 196
+EA+ VN + + SV L K L PK+V + + L T
Sbjct: 480 GKFFDNEAIVVNMPVSSFTNYPSLFPSV---LHFVKQLRPKVVVTLDRICDQMDVPLPTN 650
Query: 197 VGFVERFETAFNYFAAFFESLEP-NMALDSPERFQVESLLLGRRIDGVI-GVRERMEDKE 254
V V ++A ESL+ N+ LD ++ +E + I +I G E
Sbjct: 651 VVHV------LQCYSALLESLDAVNVNLDVLQK--IERHFIQPAIKKIILGHHHFQEKLP 806
Query: 255 QWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVS 314
W+ L GF S++ +QA+ L+ + VE +P+ L L W+ L++VS
Sbjct: 807 PWRNLFMQSGFSPFTFSNFTEAQAECLVQRAPVRGFH--VERKPSSLVLCWQKKELISVS 980
Query: 315 SW 316
+W
Sbjct: 981 TW 986
>TC220762 similar to UP|Q6S5L6 (Q6S5L6) GAI protein, partial (27%)
Length = 725
Score = 105 bits (262), Expect = 3e-23
Identities = 62/168 (36%), Positives = 100/168 (58%), Gaps = 1/168 (0%)
Frame = +1
Query: 3 KITAQSSIASSNSSSTTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVD 62
+I Q + +SSS +E+ L Y +ACPY KFAH TANQAILEA G + +H++D
Sbjct: 205 RILGQGVFQTLSSSSYPYEDNVL-YHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVID 381
Query: 63 FGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLG 122
F ++QG+QW AL+QA A R G P +R++GI + + ++ G RL+E A+ +
Sbjct: 382 FNLMQGLQWPALIQALALRPGGPP-LLRLTGIGPPS--SDNRDTLREIGLRLAELARSVN 552
Query: 123 LNFEFTPILT-PIELLDESSFCIQPDEALAVNFMLQLYNLLDENTNSV 169
+ F F + +E + + P+EA+AVN ++QL+ LL +++ +
Sbjct: 553 VRFAFRGVAAWRLEDVKPWMLQVNPNEAVAVNSIMQLHRLLASDSDPI 696
>TC229255 similar to UP|Q7X9T5 (Q7X9T5) SCARECROW-like protein, partial (37%)
Length = 1561
Score = 102 bits (254), Expect(2) = 3e-23
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 7/238 (2%)
Frame = +1
Query: 18 TTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQA 77
TT ++ +YK + P + + A + I+ E ++HI+DFGI G QW L++
Sbjct: 166 TTSADMLKAYKLYVTSSPLQRLTNYLATKTIVSLVENEGSVHIIDFGICYGFQWPCLIKK 345
Query: 78 FATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELL 137
+ R G P +RI+GI G P + TG RL+ + K + FE+ + E +
Sbjct: 346 LSERHGGPPR-LRITGIELPQPGFRPAERVEETGRRLANYCKKFKVPFEYNCLAQKWETI 522
Query: 138 DESSFCIQPDEALAVNFMLQLYNLLDENT---NSVEKALRLAKSLNPKI----VTLGEYE 190
+ I +E V+ +L NL DE + + L+L + +NP + V G Y
Sbjct: 523 KLADLKIDRNEVTVVSCFYRLKNLPDETVDVKSPRDAVLKLIRRINPNMFIHGVVNGTYN 702
Query: 191 ASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVRE 248
A F+ RF A +F++ F+ E N+ + PER L R+ G+ G+R+
Sbjct: 703 APF-----FLTRFREALYHFSSLFDMFEANVPREDPERVMPSML---*RVKGLRGLRD 852
Score = 23.5 bits (49), Expect(2) = 3e-23
Identities = 10/32 (31%), Positives = 16/32 (49%)
Frame = +3
Query: 248 ERMEDKEQWKVLMENCGFESVGLSHYAISQAK 279
ER E +QW+V + GF+ V ++ K
Sbjct: 846 ERPETYKQWQVRNQRAGFKQVRFDPLLVNDEK 941
>TC226881 similar to UP|O81316 (O81316) F6N15.20 protein (Scarecrow-like 6)
(SCL6) (AT4g00150/F6N15_20), partial (26%)
Length = 871
Score = 103 bits (256), Expect = 1e-22
Identities = 87/301 (28%), Positives = 147/301 (47%), Gaps = 11/301 (3%)
Frame = +2
Query: 27 YKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKP 86
YK+ ++ P +FA+ T NQA++EA E + IH++DF I G+QW++ +Q A RSSG P
Sbjct: 2 YKSFSEISPVLQFANFTCNQALIEAVERFDRIHVIDFDIGFGVQWSSFMQELALRSSGAP 181
Query: 87 NSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQ- 145
S++++ I ++ T ++ T L ++AK + ++FE + IE L+ +S +
Sbjct: 182 -SLKVTAI--VSPSTCDEVELNFTRENLIQYAKDINVSFELN--VFSIESLNSASCPLLG 346
Query: 146 ---PDEALAVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIVT-----LGEYEASLTTRV 197
+EA+AVN + + SV L K L PK+V + L T V
Sbjct: 347 QFFDNEAIAVNMPVSSFTNYPSLFPSV---LHFVKQLRPKVVVTLDRICDRIDVPLPTNV 517
Query: 198 GFVERFETAFNYFAAFFESLEP-NMALDSPERFQVESLLLGRRIDGVI-GVRERMEDKEQ 255
V ++A ESL+ N+ LD+ ++ +E + I +I G E
Sbjct: 518 VHV------LQCYSALLESLDAVNVNLDALQK--IERHFIQPAIKKIILGHHHSQEKLPP 673
Query: 256 WKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSS 315
W+ L GF S++ +QA+ L+ + VE +P+ L L W+ L++VS+
Sbjct: 674 WRNLFIQSGFSPFTFSNFTEAQAECLVQRAPVRGFH--VERKPSSLVLCWQRKELISVST 847
Query: 316 W 316
W
Sbjct: 848 W 850
>TC217781 similar to UP|O81316 (O81316) F6N15.20 protein (Scarecrow-like 6)
(SCL6) (AT4g00150/F6N15_20), partial (42%)
Length = 1762
Score = 97.4 bits (241), Expect = 7e-21
Identities = 90/321 (28%), Positives = 158/321 (49%), Gaps = 16/321 (4%)
Frame = +1
Query: 12 SSNSSSTTWEELTL-----SYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIV 66
++N+SS T+ L +YK+ ++ P +FA+ T NQA+LEA EG + IHI+DF I
Sbjct: 580 NANNSSFTFSPTGLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVEGFDRIHIIDFDIG 759
Query: 67 QGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFE 126
G QW++ +Q A R+ P ++I+ ++ +S + L ++A L ++FE
Sbjct: 760 LGGQWSSFMQELALRNGSAP-ELKITAF--VSPSHHDEIELSFSQESLKQYAGELHMSFE 930
Query: 127 FTPILTPIELLDESSF--CIQPDEALAVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIV 184
+ +E L+ +S+ ++ EA+ VN + ++ + + LR K L PKIV
Sbjct: 931 LE--ILSLESLNSASWPQPLRDCEAVVVNMPIGSFS---NYPSYLPLVLRFVKQLMPKIV 1095
Query: 185 TLGEYEASLTTRVGFVERFETAFNYFAAFFESLE-----PNMALDSPERF----QVESLL 235
+ T F + A ++ ESL+ P++ L E++ +E L+
Sbjct: 1096VTLDRSCD-RTDAPFPQHLIFALQSYSGLLESLDAVNVHPDV-LQMIEKYYLQPSMEKLV 1269
Query: 236 LGRRIDGVIGVRERMEDKEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVE 295
LGR G++ER WK L+ + GF + S++ SQA+ L+ + VE
Sbjct: 1270LGRH-----GLQER---ALPWKNLLLSSGFSPLTFSNFTESQAECLVQRTPSKGFH--VE 1419
Query: 296 SQPAFLSLAWKDVPLLTVSSW 316
+ + L L W+ L++VS+W
Sbjct: 1420KRQSSLVLCWQRKDLISVSTW 1482
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.131 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,825,018
Number of Sequences: 63676
Number of extensions: 159049
Number of successful extensions: 937
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of query: 316
length of database: 12,639,632
effective HSP length: 97
effective length of query: 219
effective length of database: 6,463,060
effective search space: 1415410140
effective search space used: 1415410140
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC144806.12