TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144766.5 + phase: 0 
         (393 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC223666 UP|O81532 (O81532) Mariner transposase, complete             434  e-122
TC224818 UP|Q6S4R7 (Q6S4R7) ADP-ribosylation factor, complete          28  5.5
TC228488 similar to UP|Q8LF96 (Q8LF96) PRL1 protein, partial (70%)     28  7.2

>TC223666 UP|O81532 (O81532) Mariner transposase, complete
          Length = 1278

 Score =  434 bits (1116), Expect = e-122
 Identities = 215/390 (55%), Positives = 294/390 (75%), Gaps = 2/390 (0%)
 Frame = +1

Query: 5   VASQFSLHIRYVQRIWKLAENKGVHADVSSKRAGNCGRKRV-VDLDRVRDIPLKKRTTIR 63
           VAS FS+  + + RIWK A+    H DVS K+  N GRKRV +DL ++R+IPL +RTT+R
Sbjct: 109 VASSFSVCRKTIDRIWKRAKESETH-DVSHKKTKNSGRKRVEIDLSQLREIPLSQRTTVR 285

Query: 64  DLSEALDVSRGTLSRCIRSKEIRKNSNAIKPALTE-GNKARLQFCISMLDSASIDHDPIF 122
            L+ A+  +   + R I+S  I+++S+AIKP LTE G + RL+FC+SML+   I HDP+F
Sbjct: 286 TLAVAMKTNTSAMYRLIQSGAIKRHSSAIKPQLTEEGKRLRLEFCLSMLEG--IPHDPMF 459

Query: 123 KGMYNTVHIDEKWFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRFDAQG 182
           + MYN +HIDEKWFY+ +KS+++YL+ DE+ P  SC+SKN++PK+MFL A+ARPRFD++ 
Sbjct: 460 QSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTAVARPRFDSEK 639

Query: 183 KEIFSGKIGAFPLITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVPSMMELW 242
              FSGKIG FP +T+EPA+R+SVNR AGT+ETK I  I R++I+   +E+V+P+  E+W
Sbjct: 640 NVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSVFIEKVLPATKEVW 819

Query: 243 PIEERGQPIFIQQDNAKTHIDSEDQDFRCVASQNGFDIRLVRQPPNSPDLNVLDLGFFRS 302
           P +E G  IFIQQDNA+THI+ +D +F   A+Q+GFDIRL+ QPPNSPD NVLDLGFF +
Sbjct: 820 PRDELGSTIFIQQDNARTHINPDDPEFVQAATQDGFDIRLMCQPPNSPDFNVLDLGFFSA 999

Query: 303 IQALQHKKSPNSVDDLVDAVQKSFEEYDTILSNRIFLSLQSCMIEIMKVKGTHNYKIPHM 362
           IQ+L +K++P ++D+LV+AV KSFE Y  + SN IFLSLQ CMIE MK KG++ Y   HM
Sbjct: 1000IQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCMIETMKAKGSNRYTSQHM 1179

Query: 363 KKEQLERRKELPTQRKCDIQLVQEVLSYLD 392
           +KE+LE  ++LP Q KCD  LVQE L YL+
Sbjct: 1180QKEKLETEEQLPIQLKCDPILVQETLDYLN 1269


>TC224818 UP|Q6S4R7 (Q6S4R7) ADP-ribosylation factor, complete
          Length = 1067

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 16/118 (13%)
 Frame = -3

Query: 135 WFYLKEKSKKFYLVHDEEDPIFSCQSKNYIPKIMFLVAIARPRFDAQGKEIFSG------ 188
           W Y++ K K+      + +    C+  NY  K   + AI + +   + + + +       
Sbjct: 936 WKYIQSKIKQTRCKQTQHERTRGCKRSNYS*KY*LI*AIIQTQVTQKKRILLASILLLQH 757

Query: 189 ---KIGAFPL-------ITREPARRSSVNRPAGTLETKPIQLITRNVIKKCVLEQVVP 236
              KI  F         ITR+    S+V+  AG +  KP+Q +   + + C     +P
Sbjct: 756 SLEKISIFLQEPPDSHEITRQDQNFSNVSCFAGNVVRKPVQTLIETLSRSCTSALDIP 583


>TC228488 similar to UP|Q8LF96 (Q8LF96) PRL1 protein, partial (70%)
          Length = 1303

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 15/64 (23%), Positives = 30/64 (46%)
 Frame = +1

Query: 213  LETKPIQLITRNVIKKCVLEQVVPSMMELWPIEERGQPIFIQQDNAKTHIDSEDQDFRCV 272
            L T P +  T +++K+C L Q + ++ E WP   + + + + Q         + ++F   
Sbjct: 946  LMTLPSRCGTLDMVKQCQLLQTIKNLFEQWPSIPKSKLLHLLQLTILKSSTFQKENFATT 1125

Query: 273  ASQN 276
             S N
Sbjct: 1126 CSLN 1137


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.321    0.136    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,856,434
Number of Sequences: 63676
Number of extensions: 202394
Number of successful extensions: 861
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of query: 393
length of database: 12,639,632
effective HSP length: 99
effective length of query: 294
effective length of database: 6,335,708
effective search space: 1862698152
effective search space used: 1862698152
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)