BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144766.10 + phase: 2 /partial
(1162 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC228839 similar to UP|Q93ZC7 (Q93ZC7) AT4g32920/F26P21_40, part... 583 e-166
TC223101 282 7e-76
TC233465 similar to UP|Q9VAQ7 (Q9VAQ7) CG1420-PA, partial (3%) 186 4e-47
TC223905 182 7e-46
TC229036 similar to UP|Q93ZC7 (Q93ZC7) AT4g32920/F26P21_40, part... 182 7e-46
BE823060 similar to GP|9711826|dbj P0512G09.7 {Oryza sativa (jap... 160 2e-39
TC218088 similar to UP|Q9FJQ9 (Q9FJQ9) Emb|CAB87688.1, partial (... 91 2e-38
TC222909 similar to UP|Q9FJQ9 (Q9FJQ9) Emb|CAB87688.1, partial (8%) 140 4e-33
TC218087 similar to UP|Q9FJQ9 (Q9FJQ9) Emb|CAB87688.1, partial (5%) 121 2e-27
BQ612705 66 1e-10
TC204285 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 57 5e-08
BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvo... 57 6e-08
TC214476 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 50 4e-06
TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 50 8e-06
TC215890 similar to PIR|F96770|F96770 protein RNA-binding protei... 49 1e-05
TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxida... 49 2e-05
TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 49 2e-05
TC219649 weakly similar to UP|Q95JD1 (Q95JD1) Basic proline-rich... 47 6e-05
TC204083 similar to UP|O48567 (O48567) Glycine-rich RNA-binding ... 44 3e-04
TC219461 homologue to UP|Q9AR19 (Q9AR19) Histone acetyltransfera... 44 4e-04
>TC228839 similar to UP|Q93ZC7 (Q93ZC7) AT4g32920/F26P21_40, partial (45%)
Length = 1316
Score = 583 bits (1502), Expect = e-166
Identities = 288/334 (86%), Positives = 307/334 (91%)
Frame = +3
Query: 829 SYTSPFSLHSDNILTSIMSQSVPPTIWYRLVAGLNAQLRLVRRGHLKITFGPVISWLDVY 888
SY SPFSLHSDNILTSIMSQSVPPTIWYRLVAGLNAQLRLVRRGHLKITFGPVISWLDVY
Sbjct: 3 SYMSPFSLHSDNILTSIMSQSVPPTIWYRLVAGLNAQLRLVRRGHLKITFGPVISWLDVY 182
Query: 889 ANPKLATYGVRVDLAWCQPTASGYCQFGLVVHATENENMSSSGESYDDSRVTEKQSGFLR 948
ANPKLATYGV VDLAW QPTASGY QFGLVV+ATENE+MSSS E YDDSR+TEKQ+ L
Sbjct: 183 ANPKLATYGVCVDLAWLQPTASGY*QFGLVVYATENESMSSSCEGYDDSRITEKQTCLLS 362
Query: 949 SPRNPVHHLTNNEQLLMPRRMSGGLLNGKILRTLKEKKTIYYPLALIMYNTKPIGHQDLV 1008
SPRNPVHH+ +NE L+MPRRMSGG+L+ K LRTLKEKKT YYP A I+YNTKP+ HQDLV
Sbjct: 363 SPRNPVHHIRSNEHLMMPRRMSGGILHAKSLRTLKEKKTAYYPFAFIIYNTKPVSHQDLV 542
Query: 1009 GLVISILLLGDFILVLLTLLQMYSLSLVNFFLVLFILPLGVLFPFPSGISALFSQGPRRS 1068
GLVISI+LLGDFILVLLTLLQMYSLSL++FFLVLF+LPLGVLFPFPSGISALFSQGPRRS
Sbjct: 543 GLVISIILLGDFILVLLTLLQMYSLSLLSFFLVLFVLPLGVLFPFPSGISALFSQGPRRS 722
Query: 1069 AGLARLYALWNMTSLVNVVVAFICGFIHYTVHSHDKHPNVQSWSFSMDESEWWMLPSGLF 1128
AGLARLYALWN+ SLVNVVVAF CGFIHYT SH K N QSW+FSMDESEWW+LPSGL
Sbjct: 723 AGLARLYALWNLMSLVNVVVAFFCGFIHYTARSH-KLSNFQSWNFSMDESEWWILPSGLA 899
Query: 1129 LCKIIQARLIDFHVANQEIQDPSLYSSDTNVFWN 1162
LCKIIQARL+D HVANQEIQDPSLYSSDTNVFWN
Sbjct: 900 LCKIIQARLVDCHVANQEIQDPSLYSSDTNVFWN 1001
>TC223101
Length = 672
Score = 282 bits (721), Expect = 7e-76
Identities = 141/193 (73%), Positives = 164/193 (84%)
Frame = +3
Query: 42 SLGCAGNAGAAGTYYDAVPRSLTICNHNLSTETDTLILEFPKVPLWTNIYVQNQAKALFP 101
SLGC NAGAAGT YDAVPRSL + N N++T+T+TL+LEFP PLWTN+YV+N+A+A P
Sbjct: 3 SLGCPENAGAAGTLYDAVPRSLIVDNFNMTTDTETLLLEFPNQPLWTNVYVRNKARATVP 182
Query: 102 LYWSRVQVGGLISLSSGAVLSFGLAHYGSSEFELMAEELLMRDSVIKIFGALRMSVKIHL 161
L WSRVQV G IS+ G VLSFGL HY +SEFEL+AEELLM DSV+K++GALRMSVK+ L
Sbjct: 183 LLWSRVQVQGQISILQGGVLSFGLRHYATSEFELLAEELLMSDSVMKVYGALRMSVKMFL 362
Query: 162 MQNSKILIDAKEDLLVATSLLEASNLVVLKDSSIIHSNANLGVHGQGYLNLSGPGDLIEA 221
M NSK+LID ED+ VATSLLEASNL+VL+ +S+IHSNANLGVHGQG LNLSGPGD IEA
Sbjct: 363 MWNSKMLIDGGEDITVATSLLEASNLIVLRGASVIHSNANLGVHGQGLLNLSGPGDWIEA 542
Query: 222 QHLVLSLFYSISV 234
Q LVLSLFYSI V
Sbjct: 543 QRLVLSLFYSIHV 581
>TC233465 similar to UP|Q9VAQ7 (Q9VAQ7) CG1420-PA, partial (3%)
Length = 719
Score = 186 bits (473), Expect = 4e-47
Identities = 80/112 (71%), Positives = 98/112 (87%)
Frame = +2
Query: 537 EECPVGTYKNVSGSDKALCQKCPLHELPRRAIYVAVRGGVAETPCPYKCTSDRYHMPNCY 596
+ECP GTYKNV+GSDK+LC CP++ELP RA+Y++VRGG+ ETPCPY+C SDRY MP+CY
Sbjct: 17 QECPAGTYKNVTGSDKSLCHSCPVNELPHRAVYISVRGGITETPCPYQCASDRYLMPDCY 196
Query: 597 TAFEELVYTFGGPWFFGLILLGLLIVLALVLSVARMKYVAVDDLPALAPARN 648
TA EEL+YTFGGPW FGL L+GLLI+LALVLSVARMK+V VD+LP AP ++
Sbjct: 197 TALEELIYTFGGPWLFGLFLIGLLILLALVLSVARMKFVGVDELPGPAPTQH 352
>TC223905
Length = 561
Score = 182 bits (462), Expect = 7e-46
Identities = 99/190 (52%), Positives = 130/190 (68%), Gaps = 12/190 (6%)
Frame = +1
Query: 852 PTIWYRLVAGLNAQLRLVRRGHLKITFGPVISWLDVYANPKLATYGVRVDLAWCQPTASG 911
PT WYRLVAGLNAQLRLVRRG L++TF PV+ WL+ +ANP L+ +GVR+DLAW T+SG
Sbjct: 4 PTTWYRLVAGLNAQLRLVRRGRLRVTFRPVLGWLETHANPALSVHGVRIDLAWFHATSSG 183
Query: 912 YCQFGLVVHATENENMSSSGESYDDSRVTEKQS------------GFLRSPRNPVHHLTN 959
YC +GL+V+A E E ++G S D + TE++S R+ +P + +
Sbjct: 184 YCHYGLMVYALE-EGYPATGGSTDGALRTEERSRVQSVNKEHLGLAISRAHLSPDGRIED 360
Query: 960 NEQLLMPRRMSGGLLNGKILRTLKEKKTIYYPLALIMYNTKPIGHQDLVGLVISILLLGD 1019
N M R+M G L+ L+ L +K+ I+Y L+ I+ NTKP+GHQDLVGLVIS+LLLGD
Sbjct: 361 N---YMRRQMHGAALDVNNLQMLDKKRDIFYLLSFILQNTKPVGHQDLVGLVISMLLLGD 531
Query: 1020 FILVLLTLLQ 1029
F LVLLTLLQ
Sbjct: 532 FSLVLLTLLQ 561
>TC229036 similar to UP|Q93ZC7 (Q93ZC7) AT4g32920/F26P21_40, partial (33%)
Length = 894
Score = 182 bits (462), Expect = 7e-46
Identities = 85/125 (68%), Positives = 103/125 (82%), Gaps = 2/125 (1%)
Frame = +1
Query: 1039 FLVLFILPLGVLFPFPSGISALFSQGPRRSAGLARLYALWNMTSLVNVVVAFICGFIHYT 1098
FLVLFILP G+L PFP GI+ALFS GPRRSAGLARLYALWN+TS +NVVVAF+CG+IHY
Sbjct: 10 FLVLFILPFGILLPFPVGINALFSHGPRRSAGLARLYALWNLTSFMNVVVAFLCGYIHYN 189
Query: 1099 VHSHD--KHPNVQSWSFSMDESEWWMLPSGLFLCKIIQARLIDFHVANQEIQDPSLYSSD 1156
S +HP++Q WS MDESEWW+ P+GL LCK+ Q++LI++HVAN EIQD SLYS+D
Sbjct: 190 SQSSSSKRHPSIQPWSI-MDESEWWIFPAGLVLCKLFQSQLINWHVANLEIQDRSLYSND 366
Query: 1157 TNVFW 1161
+FW
Sbjct: 367 FELFW 381
>BE823060 similar to GP|9711826|dbj P0512G09.7 {Oryza sativa (japonica
cultivar-group)}, partial (1%)
Length = 451
Score = 160 bits (406), Expect = 2e-39
Identities = 77/93 (82%), Positives = 82/93 (87%)
Frame = -1
Query: 1070 GLARLYALWNMTSLVNVVVAFICGFIHYTVHSHDKHPNVQSWSFSMDESEWWMLPSGLFL 1129
GLARLYAL N+ SLVNVVVAF CGFIHYT SH + N QSW+FSMDESEWW+LPSGL L
Sbjct: 451 GLARLYALXNLMSLVNVVVAFFCGFIHYTARSHKLY-NFQSWNFSMDESEWWILPSGLAL 275
Query: 1130 CKIIQARLIDFHVANQEIQDPSLYSSDTNVFWN 1162
CKIIQARL+D HVANQEIQDPSLYSSDTNVFWN
Sbjct: 274 CKIIQARLVDCHVANQEIQDPSLYSSDTNVFWN 176
>TC218088 similar to UP|Q9FJQ9 (Q9FJQ9) Emb|CAB87688.1, partial (10%)
Length = 984
Score = 90.5 bits (223), Expect(2) = 2e-38
Identities = 42/90 (46%), Positives = 66/90 (72%)
Frame = +1
Query: 980 RTLKEKKTIYYPLALIMYNTKPIGHQDLVGLVISILLLGDFILVLLTLLQMYSLSLVNFF 1039
++L ++ +PL+L++ NT+P+G QD V L+I+++LL D + LL LLQ Y ++L F
Sbjct: 1 KSLDFRRDFLFPLSLLLCNTRPVGRQDTVQLLITLMLLADLSVTLLMLLQFYWIALAAFL 180
Query: 1040 LVLFILPLGVLFPFPSGISALFSQGPRRSA 1069
VL ILPL +L PFP+G++ALFS+ PRR++
Sbjct: 181 SVLLILPLSLLSPFPAGLNALFSKEPRRAS 270
Score = 88.6 bits (218), Expect(2) = 2e-38
Identities = 44/91 (48%), Positives = 62/91 (67%), Gaps = 1/91 (1%)
Frame = +2
Query: 1072 ARLYALWNMTSLVNVVVAFICGFIHYTVHSHDKHPNVQSW-SFSMDESEWWMLPSGLFLC 1130
+R+YALWN TSL N+ VAFIC +HY + SH HP+ S + ++ + W+LP LFL
Sbjct: 275 SRVYALWNATSLSNIGVAFICCLLHYAL-SHFHHPDETSTRNVKREDDKCWLLPIILFLF 451
Query: 1131 KIIQARLIDFHVANQEIQDPSLYSSDTNVFW 1161
K IQAR +++H+AN EI+D SL+ D + FW
Sbjct: 452 KSIQARFVNWHIANLEIEDFSLFCPDPDAFW 544
>TC222909 similar to UP|Q9FJQ9 (Q9FJQ9) Emb|CAB87688.1, partial (8%)
Length = 421
Score = 140 bits (352), Expect = 4e-33
Identities = 60/106 (56%), Positives = 83/106 (77%)
Frame = +2
Query: 814 LHQRFPMSIIFGGDGSYTSPFSLHSDNILTSIMSQSVPPTIWYRLVAGLNAQLRLVRRGH 873
+ +RFPM IIFGGDGSY +P++LH+D +LT+++ Q VP T+W RLVAGLNAQLR VR G
Sbjct: 8 IQKRFPMCIIFGGDGSYMAPYNLHNDTLLTNLLGQHVPATVWNRLVAGLNAQLRTVRHGS 187
Query: 874 LKITFGPVISWLDVYANPKLATYGVRVDLAWCQPTASGYCQFGLVV 919
++ GPV+ W++ +ANP+L +GV+++L W Q TASGY Q G+VV
Sbjct: 188 IRTALGPVVDWINSHANPQLEFHGVKIELGWFQATASGYYQLGIVV 325
>TC218087 similar to UP|Q9FJQ9 (Q9FJQ9) Emb|CAB87688.1, partial (5%)
Length = 766
Score = 121 bits (303), Expect = 2e-27
Identities = 62/125 (49%), Positives = 88/125 (69%), Gaps = 1/125 (0%)
Frame = +1
Query: 1038 FFLVLFILPLGVLFPFPSGISALFSQGPRRSAGLARLYALWNMTSLVNVVVAFICGFIHY 1097
F VL ILPL +L PFP+G++ALFS+ P R A L+R+YALWN TSL N+ VAFIC +HY
Sbjct: 94 FLSVLLILPLSLLSPFPAGLNALFSKEPSR-ASLSRVYALWNATSLSNIGVAFICCLLHY 270
Query: 1098 TVHSHDKHPNVQSW-SFSMDESEWWMLPSGLFLCKIIQARLIDFHVANQEIQDPSLYSSD 1156
++ SH HP+ S + ++ + W+LP LFL K +QAR +++H+AN E++D SL+ D
Sbjct: 271 SL-SHFYHPDEASTRNVKREDDKCWLLPIILFLFKSVQARFVNWHIANLEMEDYSLFCPD 447
Query: 1157 TNVFW 1161
+ FW
Sbjct: 448 PDAFW 462
>BQ612705
Length = 330
Score = 65.9 bits (159), Expect = 1e-10
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2
Query: 1131 KIIQARLIDFHVANQEIQDPSLYSSDTNVFWN 1162
KIIQARL+D HVANQEIQDPSLYSSDTNVFWN
Sbjct: 2 KIIQARLVDCHVANQEIQDPSLYSSDTNVFWN 97
>TC204285 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (32%)
Length = 1539
Score = 57.0 bits (136), Expect = 5e-08
Identities = 66/213 (30%), Positives = 79/213 (36%), Gaps = 6/213 (2%)
Frame = -2
Query: 318 SGVISASGLGCTGGLGKGRYFENGIGGG-GGHGGYGGDGYYNGNFIEGGTTYGDVDLPCE 376
SG + G G GG+G G + G+GG GG GG GG G++ G GGTT+G +
Sbjct: 725 SGFLKIGGHGFFGGVGGGSF--GGVGGSFGGFGGRGG-GFFGGFGGSGGTTFGGLGGFFG 555
Query: 377 LGSGSGNDSIAGATAGGGIIVMGSLEH-----SLTSLTLNGSLRSDGESFGDDIRRQDGR 431
G G + G GG+ G T G G +FG G
Sbjct: 554 GFGG*GGSTFGGFGGCGGLTFGGHGGFFGGFGG*GGSTFGGFGGCGGLTFG-------GL 396
Query: 432 TSSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGD 491
G GG GG L F G S T GG G +GG GGG
Sbjct: 395 GGFFGGCGG*GG--LTFGGFGG*GGS----TFGGHGGLTGGFGGG--------------- 279
Query: 492 EYITLASVEGSIITGGGFGGGQGLPGKNGSISG 524
+TGGGFGGG G G SG
Sbjct: 278 ------------LTGGGFGGGTTFGGHGGGFSG 216
Score = 40.8 bits (94), Expect = 0.003
Identities = 63/199 (31%), Positives = 74/199 (36%), Gaps = 5/199 (2%)
Frame = -2
Query: 322 SASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGS 381
S LG +GG G + G G GG+ G GG G F+ GT +L GS
Sbjct: 950 SGGNLG-SGGRGGSGFL*IGTG*SGGNLGSGGRG--GSGFL*IGTG*SGGNLGSGGRGGS 780
Query: 382 GNDSIAGATAGGGIIVMGS-----LEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIG 436
G I +GG + + GS H GS G SFG R G G
Sbjct: 779 GFL*IGTGGSGGNLGIGGSGFLKIGGHGFFGGVGGGSFGGVGGSFGGFGGRGGG---FFG 609
Query: 437 PGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITL 496
GGSGGT G GG G + GG GG G + F G +
Sbjct: 608 GFGGSGGTTF-------GGLGGFFGGFGG*GGSTFGGFGGCGGLTFGGH----GGFFGGF 462
Query: 497 ASVEGSIITGGGFGGGQGL 515
GS T GGFGG GL
Sbjct: 461 GG*GGS--TFGGFGGCGGL 411
Score = 37.4 bits (85), Expect = 0.039
Identities = 63/215 (29%), Positives = 82/215 (37%), Gaps = 11/215 (5%)
Frame = -2
Query: 321 ISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSG 380
+S LG +GG G + G G GG+ G GG G I G + G++ GSG
Sbjct: 1019 LSGGNLG-SGGRGGSGFL*IGTG*SGGNLGSGGRGGSGFL*IGTG*SGGNLGSGGRGGSG 843
Query: 381 --------SGNDSIAGATAGGGIIVMGSLEHSLTSLTLNGS--LRSDGESFGDDIRRQDG 430
SG + +G G G + +G+ S +L + GS L+ G F
Sbjct: 842 FL*IGTG*SGGNLGSGGRGGSGFL*IGT-GGSGGNLGIGGSGFLKIGGHGFFG------- 687
Query: 431 RTSSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVG 490
G GGGS G G GG+G GG GG G F +G
Sbjct: 686 -----GVGGGSFG-----------GVGGSFGGFGGRGGGFFGGFGGSGGTTFG----GLG 567
Query: 491 DEYITLASVEGSIITGGGFGGGQGLP-GKNGSISG 524
+ GS T GGFGG GL G +G G
Sbjct: 566 GFFGGFGG*GGS--TFGGFGGCGGLTFGGHGGFFG 468
>BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvox carteri f.
nagariensis}, partial (25%)
Length = 407
Score = 56.6 bits (135), Expect = 6e-08
Identities = 52/161 (32%), Positives = 57/161 (35%), Gaps = 1/161 (0%)
Frame = +1
Query: 319 GVISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELG 378
G + G G GG G G G GGGGG GG GG+G G GG G
Sbjct: 7 GEVCPGGGGGGGGGGGG----GGGGGGGGGGGRGGEGGGGGGGGGGG------------G 138
Query: 379 SGSGNDSIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESF-GDDIRRQDGRTSSIGP 437
G G + G GGG G G F G + R+ G G
Sbjct: 139 GGGGGEGGGGGGGGGG----------------GGGGGGGGGVF*GGERXREGGERGGGGG 270
Query: 438 GGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGG 478
GGG GG G GG G GGGGGGGG
Sbjct: 271 GGGGGG-----------GGGGXGGGGGGGGRGGGGGGGGGG 360
Score = 54.3 bits (129), Expect = 3e-07
Identities = 56/186 (30%), Positives = 58/186 (31%)
Frame = +2
Query: 335 GRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAGGG 394
G F G GGGGG GG GG G G GG G G G G G GGG
Sbjct: 5 GERFARGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGG-----GGGGGGGGGGGGKGGGG 169
Query: 395 IIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLAL 454
G G G R + G GGG GG
Sbjct: 170 G---------------GGGGGGGGGGGGGGFFRGERXXGRGGRGGGGGGG---------- 274
Query: 455 GDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQG 514
GG G GGGGGGGG EG GGG GGG G
Sbjct: 275 ---------GGGGGGGGGGGGGGG---------------------EGGGGGGGGGGGGGG 364
Query: 515 LPGKNG 520
G+ G
Sbjct: 365 GGGRGG 382
Score = 53.9 bits (128), Expect = 4e-07
Identities = 52/155 (33%), Positives = 53/155 (33%)
Frame = +1
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGND 384
G G GG G GR E G GGGGG GG GG G EGG G G G
Sbjct: 58 GGGGGGGGGGGRGGEGGGGGGGGGGGGGGGGG------EGG------------GGGGGGG 183
Query: 385 SIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGT 444
G GGG+ G G R G G G G GGG GG
Sbjct: 184 GGGGGGGGGGVF*GGERXRE-------GGERGGGGGGGGG----GGGGGGXGGGGGGGGR 330
Query: 445 VLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGR 479
GG G GGGGGG GR
Sbjct: 331 G------------------GGGGGGGGGGGGGEGR 381
Score = 53.1 bits (126), Expect = 7e-07
Identities = 56/190 (29%), Positives = 59/190 (30%)
Frame = +3
Query: 335 GRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAGGG 394
GR G GGGGG GG GG G G EGG G G G G GGG
Sbjct: 6 GRGLPGGGGGGGGGGGGGGGGGGGGGGGEGG------------GGGGGGGGGGGGGGGGG 149
Query: 395 IIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLAL 454
G G G G GGG GG L +
Sbjct: 150 -----------------GGRGGGGGGGGG------------GGGGGGGGGGFLGGREXXG 242
Query: 455 GDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQG 514
G GG+G GGGGGGGG GGG GGG G
Sbjct: 243 G--------GGEGGGGGGGGGGGG---------------------------GGGXGGGGG 317
Query: 515 LPGKNGSISG 524
G+ G G
Sbjct: 318 GRGEGGGGGG 347
Score = 52.4 bits (124), Expect = 1e-06
Identities = 50/154 (32%), Positives = 52/154 (33%)
Frame = +3
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGND 384
G G GG G G G GGGGG GG GG+G G GG G G G G
Sbjct: 6 GRGLPGGGGGGGGGGGG-GGGGGGGGGGGEGGGGGGGGGGGGGGG--------GGGGGGR 158
Query: 385 SIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGT 444
G GGG G G G G G GGG GG
Sbjct: 159 GGGGGGGGGG----------------GGGGGGGGGFLGGREXXGGGGEGGGGGGGGGGG- 287
Query: 445 VLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGG 478
G GG+G GGGGGGGG
Sbjct: 288 ----------GGGGXGGGGGGRGEGGGGGGGGGG 359
Score = 50.4 bits (119), Expect = 4e-06
Identities = 52/155 (33%), Positives = 54/155 (34%)
Frame = +3
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGND 384
G G GG G G G GGGGG GG GG G G GG G G G G
Sbjct: 21 GGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGR-------GGGGGGG 179
Query: 385 SIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGT 444
G GGG +G E G G G G G GGG GG
Sbjct: 180 GGGGGGGGGGGGFLGGREXX------GGGGEGGGGGGGG------GGGGGGGXGGGGGGR 323
Query: 445 VLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGR 479
G+ GG G GGGG GGGR
Sbjct: 324 ----------GEGG--GGGGGGGGGGGGGGEGGGR 392
Score = 43.5 bits (101), Expect = 5e-04
Identities = 54/193 (27%), Positives = 55/193 (27%)
Frame = +1
Query: 333 GKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAG 392
G G G GGGGG GG GG G G GG G G G G G
Sbjct: 1 GGGEVCPGGGGGGGGGGGGGGGGGGGGGGGRGGE-----------GGGGG-----GGGGG 132
Query: 393 GGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTL 452
GG G GGG GG
Sbjct: 133 GG-----------------------------------------GGGGGEGGG-------- 165
Query: 453 ALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGG 512
GG G GGGGGGGG V G E G GGG GGG
Sbjct: 166 -----------GGGGGGGGGGGGGGGGVF*GGERXREGGE-------RGGGGGGGGGGGG 291
Query: 513 QGLPGKNGSISGK 525
G G G G+
Sbjct: 292 GGGXGGGGGGGGR 330
Score = 42.0 bits (97), Expect = 0.002
Identities = 46/161 (28%), Positives = 48/161 (29%)
Frame = +1
Query: 316 EYSGVISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPC 375
E G G G GG G+G G GGGGG GG GG EGG G
Sbjct: 100 EGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGVF*GGERXREGGERGGG----- 264
Query: 376 ELGSGSGNDSIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSI 435
G G G G GGG GR
Sbjct: 265 --GGGGGGGGGGGGXGGGG--------------------------------GGGGRGGGG 342
Query: 436 GPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGG 476
G GGG GG GG+G GGGGGG
Sbjct: 343 GGGGGGGG--------------------GGEGREEGGGGGG 405
>TC214476 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (14%)
Length = 642
Score = 50.4 bits (119), Expect = 4e-06
Identities = 57/186 (30%), Positives = 64/186 (33%)
Frame = -3
Query: 339 ENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAGGGIIVM 398
E G G GG G GG GY G GG + G G G+ +G +AGGG
Sbjct: 637 EGGGGSAGGGGSKGGGGYGGGGSQGGGGSAG----------GGGS*GGSGGSAGGG---- 500
Query: 399 GSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLALGDSS 458
GS G S G Q G + S G G G GG+ G S
Sbjct: 499 ------------EGSGSQGGGSGGGG--SQGGGSGSGGGGYGGGGS----------GGSE 392
Query: 459 IISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQGLPGK 518
GG S GGGGGGGG GGG+GGG K
Sbjct: 391 -----GGGSSGGGGGGGGGGG--------------------------GGGYGGG---GDK 314
Query: 519 NGSISG 524
G I G
Sbjct: 313 GGGIGG 296
Score = 44.7 bits (104), Expect = 2e-04
Identities = 32/74 (43%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -3
Query: 322 SASGLGCTGGLGKGRYFENGI-GGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSG 380
S SG G GG G G G GGGGG GG GG G Y G +GG GD G G
Sbjct: 442 SGSGGGGYGGGGSGGSEGGGSSGGGGGGGGGGGGGGYGGGGDKGGGIGGDKG-DYHHGKG 266
Query: 381 SGNDSIAGATAGGG 394
D G GGG
Sbjct: 265 GKGDKDGGDKGGGG 224
Score = 42.0 bits (97), Expect = 0.002
Identities = 49/166 (29%), Positives = 53/166 (31%), Gaps = 4/166 (2%)
Frame = -3
Query: 317 YSGVISASGLGCTGGLGKGRYFENGIGGGGGH----GGYGGDGYYNGNFIEGGTTYGDVD 372
Y G S G G GG G GGG G GG GG G G GG YG
Sbjct: 586 YGGGGSQGGGGSAGGGGS*GGSGGSAGGGEGSGSQGGGSGGGGSQGGGSGSGGGGYG--- 416
Query: 373 LPCELGSGSGNDSIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRT 432
G GSG G++ GGG G G +G
Sbjct: 415 -----GGGSGGSEGGGSSGGGG----------------GGGGGGGGGGYG---------- 329
Query: 433 SSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGG 478
GGG GG GD GG+G GG GGGG
Sbjct: 328 GGGDKGGGIGGD---------KGDYH--HGKGGKGDKDGGDKGGGG 224
Score = 36.6 bits (83), Expect = 0.066
Identities = 32/91 (35%), Positives = 35/91 (38%)
Frame = -3
Query: 434 SIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEY 493
S G GG +GG G S GG GS GGG GGG G
Sbjct: 640 SEGGGGSAGG-----------GGSKGGGGYGGGGSQGGGGSAGGGG--------S*GGSG 518
Query: 494 ITLASVEGSIITGGGFGGGQGLPGKNGSISG 524
+ EGS GGG GGG G +GS G
Sbjct: 517 GSAGGGEGSGSQGGGSGGGGSQGGGSGSGGG 425
>TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (11%)
Length = 678
Score = 49.7 bits (117), Expect = 8e-06
Identities = 52/167 (31%), Positives = 57/167 (33%), Gaps = 3/167 (1%)
Frame = -3
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGND 384
G+G GG G G G GGGG G GGDG + G G GD G G G D
Sbjct: 454 GIG-NGGSGGGGGASGGNGGGGASG--GGDGRFGGEGDGGKGGGGDG------GKGGGVD 302
Query: 385 SIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGT 444
S G GGG DG + G DG G GG GG
Sbjct: 301 SGIGGGKGGG---------------------GDGGNGGGG----DGGNGGGGDGGNGGGG 197
Query: 445 VLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHF---HWSHIP 488
S +GG G GGGGG +H WS P
Sbjct: 196 A---------------SGIGGGGHSLGGGGGSSHSLHIMCGTWSSFP 101
Score = 36.6 bits (83), Expect = 0.066
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = -3
Query: 318 SGVISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGG 365
SG+ G G GG G G NG GG GG+GG G G G GG
Sbjct: 301 SGIGGGKGGGGDGGNGGGGDGGNGGGGDGGNGGGGASGIGGGGHSLGG 158
Score = 29.6 bits (65), Expect = 8.0
Identities = 19/53 (35%), Positives = 21/53 (38%), Gaps = 1/53 (1%)
Frame = -3
Query: 2 GTGTISATGGGGFAGGGGGRISIH-VFSRHDNTDFFIHGGVSLGCAGNAGAAG 53
G G GGGG +GGG GR + D GGV G G G G
Sbjct: 427 GGGASGGNGGGGASGGGDGRFGGEGDGGKGGGGDGGKGGGVDSGIGGGKGGGG 269
>TC215890 similar to PIR|F96770|F96770 protein RNA-binding protein F1O17.10
[imported] - Arabidopsis thaliana {Arabidopsis
thaliana;} , partial (17%)
Length = 913
Score = 49.3 bits (116), Expect = 1e-05
Identities = 43/146 (29%), Positives = 51/146 (34%), Gaps = 13/146 (8%)
Frame = +2
Query: 311 RSVKVEYSGV----ISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGY---------Y 357
R ++V Y+ G G G +G G Y GG GGYGGD Y Y
Sbjct: 74 RPIRVNYANERPRGYGGGGFGSYGAVGGGGYE----GGSSYRGGYGGDNYSRNDGSGYGY 241
Query: 358 NGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSD 417
G G YGD SGSGN+ G G + S +GS+
Sbjct: 242 GGGRYGSGGNYGD--------SGSGNNYSGGYAGNAGGVGNHESSTGFASNGYDGSVVDG 397
Query: 418 GESFGDDIRRQDGRTSSIGPGGGSGG 443
G G DG S G GS G
Sbjct: 398 GVGAGSGTSFADGYDGSAGSEFGSSG 475
>TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxidase ATP26a
{Arabidopsis thaliana;} , partial (49%)
Length = 731
Score = 48.5 bits (114), Expect = 2e-05
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 10/207 (4%)
Frame = -2
Query: 282 LAFTLQICRVEDVSVEGTITGSVLHFHWIRSVKVEYSGVISASGLGCTGGL----GKGRY 337
++F + ++ +SV + G + + V+ E V + G+G T G G+ +
Sbjct: 718 VSFVICTSLLKPLSVARVVGGGSV----VGEVRDELGAVRESDGVGPTEGDEFFDGEAAF 551
Query: 338 FE------NGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATA 391
E +G GGGG GGYGG EGG+ + E G+ + +AG
Sbjct: 550 GEELGDLRDGHGGGGEVGGYGGG--------EGGSAVAAAEEDGEEGAAEHGEEVAG--- 404
Query: 392 GGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQT 451
GGG V + + L G L +D E G + ++GPG G GG V
Sbjct: 403 GGGENV--GAGDGVGAGELKGGLGADDEVEGVAGEGEVDVGVALGPGEGRGGEEDGGV-- 236
Query: 452 LALGDSSIISTVGGQGSPSGGGGGGGG 478
A+G+ +++ + + GGGGGG G
Sbjct: 235 TAVGEEAVVE----EEAERGGGGGGAG 167
>TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (22%)
Length = 1296
Score = 48.5 bits (114), Expect = 2e-05
Identities = 61/202 (30%), Positives = 76/202 (37%), Gaps = 5/202 (2%)
Frame = -2
Query: 324 SGLGCTGGLGKGRYFENGIGGGGGHGG-YGGDGYYNGNFIEGG--TTYGDVDLPCELGSG 380
+G+G G G G + G GGG G GG + G G +G GG +++G D G
Sbjct: 581 TGVGGGGDGGGGELY*TGGGGGDGDGGGW*GAGCGDGG---GGECSSHGGGD------GG 429
Query: 381 SGNDSIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGG 440
G SI G GGG S++ G+ G G G GGG
Sbjct: 428 GGGGSIQGGGGGGG------------------SIQGGGDGGGGGGE*TGGGGE*TGGGGG 303
Query: 441 SGGTVLLFVQTLALGDSSIISTVGGQGSPSGG--GGGGGGRVHFHWSHIPVGDEYITLAS 498
GD + GG+G GG GGGGGG G E +
Sbjct: 302 --------------GDK*G*TGGGGEGGGGGGECGGGGGGEC------CGGGGEL**YCT 183
Query: 499 VEGSIITGGGFGGGQGLPGKNG 520
G TGGG GGG G G+ G
Sbjct: 182 GGGGENTGGGGGGGDGGGGEGG 117
Score = 40.4 bits (93), Expect = 0.005
Identities = 46/152 (30%), Positives = 51/152 (33%)
Frame = -2
Query: 327 GCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSI 386
G TGG G+G GGGGG G GG G G GG G++ C G G
Sbjct: 290 G*TGGGGEG-------GGGGGECGGGGGGECCG----GG---GEL**YCTGGGGENTGGG 153
Query: 387 AGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVL 446
G GGG GE G D+ + G G GGG GG
Sbjct: 152 GGGGDGGG-----------------------GEGGGGDLTQYVGEGGG-GEGGGGGGE*T 45
Query: 447 LFVQTLALGDSSIISTVGGQGSPSGGGGGGGG 478
G G GGG GGGG
Sbjct: 44 ------------------GGGGEGGGGDGGGG 3
Score = 35.4 bits (80), Expect = 0.15
Identities = 44/136 (32%), Positives = 46/136 (33%), Gaps = 6/136 (4%)
Frame = -2
Query: 349 GGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAG------ATAGGGIIVMGSLE 402
GG GGD Y + GG P G G GND G GGG G L
Sbjct: 692 GGGGGDAYETP--MTGGKG------PSYTGVGGGNDGGGGEL***TGVGGGGDGGGGELY 537
Query: 403 HSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLALGDSSIIST 462
T G DG + G GGG GG G SI
Sbjct: 536 *-----TGGGGGDGDGGGW*GAGCGDGGGGECSSHGGGDGGG----------GGGSIQGG 402
Query: 463 VGGQGSPSGGGGGGGG 478
GG GS GGG GGGG
Sbjct: 401 GGGGGSIQGGGDGGGG 354
Score = 33.5 bits (75), Expect = 0.56
Identities = 27/67 (40%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Frame = -2
Query: 463 VGGQGSPSGG-----GGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQGLPG 517
VGG G GG GGGGG W GD S G GGG G QG G
Sbjct: 575 VGGGGDGGGGELY*TGGGGGDGDGGGW*GAGCGDGGGGECSSHGGGDGGGGGGSIQGGGG 396
Query: 518 KNGSISG 524
GSI G
Sbjct: 395 GGGSIQG 375
>TC219649 weakly similar to UP|Q95JD1 (Q95JD1) Basic proline-rich protein,
partial (37%)
Length = 750
Score = 46.6 bits (109), Expect = 6e-05
Identities = 65/212 (30%), Positives = 72/212 (33%), Gaps = 6/212 (2%)
Frame = -1
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGND 384
G+G GG G + G GGG G GG G G+ GG G P G G G
Sbjct: 729 GVGPGGGGPVGGGYGGGPGGGAGSGGGSYGGGPGGDAGPGGGGPGGSAGPGSGGYGGGPG 550
Query: 385 SIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGT 444
G GGG G+ GS G GD G GPGGG G+
Sbjct: 549 GDTG--PGGGEPGSGAGP---------GSGGYGGGPGGDAGPGGGGPGGGAGPGGGEPGS 403
Query: 445 VLLFVQTLALGDSSIISTVGGQGSPSGGG-GGGGGRVHFHWSHIPVGDEYITLASVEGSI 503
G GG P GGG GGG GR G + A G
Sbjct: 402 ------GAGPGSGGYGGGPGGGVGPGGGGPGGGAGR---------GGGGPGSGAGPSGGG 268
Query: 504 ITGGGF-----GGGQGLPGKNGSISGKACPKG 530
GG + GGG G G G G A P G
Sbjct: 267 PGGGSYGGEPGGGGPGGDGYGGGPGGGAGPDG 172
>TC204083 similar to UP|O48567 (O48567) Glycine-rich RNA-binding protein,
partial (95%)
Length = 1019
Score = 44.3 bits (103), Expect = 3e-04
Identities = 27/64 (42%), Positives = 34/64 (52%), Gaps = 5/64 (7%)
Frame = +2
Query: 311 RSVKVEYSGVISASGLGCTGGLGKGRYFENG---IGGGGGHGGYGG--DGYYNGNFIEGG 365
R++ V + ++ G G GG G G + G GGGGG GGYGG +G YN N GG
Sbjct: 266 RNITVNEAQTRASRGGGGGGGFGSGGGYNRGSGGYGGGGGGGGYGGRREGGYNRNGGGGG 445
Query: 366 TTYG 369
YG
Sbjct: 446 GGYG 457
Score = 40.0 bits (92), Expect = 0.006
Identities = 27/60 (45%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Frame = +2
Query: 319 GVISASGLGCTGGLGKGRYFENGIGGGGGHG-----GYGGDG---YYNGNFIEGGTTYGD 370
G G G GG +G Y NG GGGGG+G GYGGDG Y G EGG + G+
Sbjct: 365 GYGGGGGGGGYGGRREGGYNRNGGGGGGGYGGGRDRGYGGDGGSRYSRGG--EGGGSDGN 538
Score = 33.1 bits (74), Expect = 0.73
Identities = 48/180 (26%), Positives = 67/180 (36%), Gaps = 10/180 (5%)
Frame = +2
Query: 352 GGDGYYNGN--FIEGGTTYGDVDLPCELGSGSGNDSIAGATAGGGIIVMGSLEHSLTSLT 409
GG + GN + + YGD+ + S ND G + G G + S + ++
Sbjct: 74 GGLAWVTGNDALEKAFSIYGDI-----VESKVINDRETGRSRGFGFVTFASEQSMKDAIA 238
Query: 410 -LNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGS 468
+NG + G +I + +T + GGG GG + GG
Sbjct: 239 GMNGQ-----DLDGRNITVNEAQTRASRGGGGGGG----------------FGSGGGYNR 355
Query: 469 PSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIIT-----GGGFGGG--QGLPGKNGS 521
SGG GGGGG G Y EG GGG+GGG +G G GS
Sbjct: 356 GSGGYGGGGG-----------GGGY--GGRREGGYNRNGGGGGGGYGGGRDRGYGGDGGS 496
>TC219461 homologue to UP|Q9AR19 (Q9AR19) Histone acetyltransferase GCN5
(At3g54610) (Expressed protein), partial (12%)
Length = 853
Score = 43.9 bits (102), Expect = 4e-04
Identities = 36/129 (27%), Positives = 55/129 (41%), Gaps = 22/129 (17%)
Frame = -2
Query: 414 LRSDGESFGDD--IRRQDGRTSSIGPGGGSGGTVLLFVQTL------------------- 452
L DG FG + + GR + G G G+ G V++ V +
Sbjct: 513 LNFDGGVFGLELGVAGSGGRVAEPGGGEGAHGGVVVVVVVVVVLVVVDDGVLGFGVGVGV 334
Query: 453 -ALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGG 511
A G ++ VGG+G+ +G GG GGG G+ + E +++ GGG GG
Sbjct: 333 GAAGGDALEVVVGGEGTVAGVGGEGGG-----------GEGRRVVLGHELALVDGGGGGG 187
Query: 512 GQGLPGKNG 520
G G+ G+ G
Sbjct: 186 GGGVRGRRG 160
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.140 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,641,312
Number of Sequences: 63676
Number of extensions: 960526
Number of successful extensions: 13508
Number of sequences better than 10.0: 279
Number of HSP's better than 10.0 without gapping: 7067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10579
length of query: 1162
length of database: 12,639,632
effective HSP length: 108
effective length of query: 1054
effective length of database: 5,762,624
effective search space: 6073805696
effective search space used: 6073805696
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Medicago: description of AC144766.10