TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144765.9 + phase: 0 
         (273 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE210951 similar to GP|9711921|dbj| Adenine phosphoribosyltransf...    30  1.5
CA952954 homologue to GP|21616072|emb Tic62 protein {Pisum sativ...    28  3.4
TC229487 similar to UP|Q6ZIG4 (Q6ZIG4) Receptor protein kinase P...    27  7.6
TC219851 similar to UP|Q9LQR3 (Q9LQR3) T4O12.26, partial (56%)         27  9.9

>BE210951 similar to GP|9711921|dbj| Adenine phosphoribosyltransferase
           {Hordeum vulgare subsp. vulgare}, partial (19%)
          Length = 367

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 5   VYARGSFFSDCLNVCAKGGLLDTGSHYIQCWKQNERADPGWANSHDLYA 53
           +Y      S C+  C+K G LD  + YI C     R   G  N+HD+YA
Sbjct: 133 IYTLHILSSHCIICCSKIGPLDE-TKYIDC*CYLIRVYNGLLNTHDVYA 276


>CA952954 homologue to GP|21616072|emb Tic62 protein {Pisum sativum}, partial
           (7%)
          Length = 424

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 195 KVELSNKHDNIFEIVNQLKSSRIHSSIRGEILCLWEL 231
           K+ + NKHD+  ++     +S  H  I    LCLW L
Sbjct: 27  KIVMDNKHDH*SKLFTSSHNSSSHF*ISSFYLCLWRL 137


>TC229487 similar to UP|Q6ZIG4 (Q6ZIG4) Receptor protein kinase PERK1-like
           protein, partial (53%)
          Length = 1004

 Score = 27.3 bits (59), Expect = 7.6
 Identities = 28/91 (30%), Positives = 41/91 (44%), Gaps = 2/91 (2%)
 Frame = +1

Query: 121 TMGDILREADLLGKAGEFLDAYELVFFYVFAKSLWSGGSKAWPLKQFTQ--KAGLLGKAL 178
           T+G +  E  +LGKA E  D Y    F +    L SG     PL++ +   K  +   AL
Sbjct: 256 TLGYLAPEYAMLGKANESCDVYS---FGILLLELASGKK---PLEKLSSAVKRSINDWAL 417

Query: 179 TFAKEVSSSFYELASTKVELSNKHDNIFEIV 209
             A E    F ELA  K+E +   + +  +V
Sbjct: 418 PLACE--KKFSELADPKLEGNYAEEELKRVV 504


>TC219851 similar to UP|Q9LQR3 (Q9LQR3) T4O12.26, partial (56%)
          Length = 590

 Score = 26.9 bits (58), Expect = 9.9
 Identities = 20/60 (33%), Positives = 30/60 (49%)
 Frame = +3

Query: 189 YELASTKVELSNKHDNIFEIVNQLKSSRIHSSIRGEILCLWELLDSHFRLNSSKYVWQDS 248
           +E   T  EL  +H    +  NQL++ R  +S R E LCL+  +    RL    ++W DS
Sbjct: 99  HEGPDTVEELLERHLVKNKNENQLENQRQLTSTRREALCLYRDILRATRL----FIWPDS 266


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.322    0.135    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,581,215
Number of Sequences: 63676
Number of extensions: 158175
Number of successful extensions: 834
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of query: 273
length of database: 12,639,632
effective HSP length: 96
effective length of query: 177
effective length of database: 6,526,736
effective search space: 1155232272
effective search space used: 1155232272
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)