TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144765.18 - phase: 2 /pseudo
         (374 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC222068 similar to GB|CAA80380.1|1673365|ATTRNASYA mitochondria...   294  5e-80
TC216957 similar to PIR|D96538|D96538 cytosolic tRNA-Ala synthet...   135  3e-32
TC228048 homologue to UP|Q8LA44 (Q8LA44) Receptor protein kinase...    28  5.1
BG510271                                                               28  5.1
TC217874 similar to UP|Q8GTM7 (Q8GTM7) Putataive glucan 1,3-beta...    28  8.8

>TC222068 similar to GB|CAA80380.1|1673365|ATTRNASYA mitochondrial tRNA-Ala
           synthetase {Arabidopsis thaliana;} , partial (19%)
          Length = 600

 Score =  294 bits (752), Expect = 5e-80
 Identities = 145/178 (81%), Positives = 162/178 (90%)
 Frame = +1

Query: 179 LGDVFPELKQQEVHIRNVIQEEEESFGRTLVKGIAKFKTAVGHVQGNILSGEATFELWDT 238
           +GDVFPELKQQE HIRN+I+EEEESFGRTL+KGI KF+ AV  VQGNILSGE  F LWDT
Sbjct: 7   MGDVFPELKQQETHIRNIIEEEEESFGRTLIKGIEKFEAAVRQVQGNILSGEEAFVLWDT 186

Query: 239 YGFPLDLTQLMAEEKKLKVDVEGFNSAMEAARERSRTAQNKQAGGAIVMDADATSALQKR 298
           YGFPLDLTQLMAEEK L VDV+GF+SAMEAARERSR+AQ KQAGGAIVMDADATSAL K+
Sbjct: 187 YGFPLDLTQLMAEEKGLVVDVKGFDSAMEAARERSRSAQTKQAGGAIVMDADATSALHKK 366

Query: 299 SIVPTDDSFKFASFRDHETVVKAIYTGSEFVDSVNTDGDVGVILESTSFYAEQGGQVF 356
            IVPT+DSFK+A F+DHE+VVKAIYTGSEFVD+VNT  D+GV+LESTSFYAEQGGQ+F
Sbjct: 367 GIVPTNDSFKYAWFKDHESVVKAIYTGSEFVDTVNTGDDIGVVLESTSFYAEQGGQIF 540


>TC216957 similar to PIR|D96538|D96538 cytosolic tRNA-Ala synthetase
           [imported] - Arabidopsis thaliana {Arabidopsis
           thaliana;} , partial (49%)
          Length = 1722

 Score =  135 bits (340), Expect = 3e-32
 Identities = 66/84 (78%), Positives = 75/84 (88%)
 Frame = +2

Query: 273 SRTAQNKQAGGAIVMDADATSALQKRSIVPTDDSFKFASFRDHETVVKAIYTGSEFVDSV 332
           S +   KQAGGAIVMDADATSAL KR IVPT+DSFK+A F+DHE+VVKAIYTGSEFVD+V
Sbjct: 23  SLSPXTKQAGGAIVMDADATSALHKRGIVPTNDSFKYAWFKDHESVVKAIYTGSEFVDTV 202

Query: 333 NTDGDVGVILESTSFYAEQGGQVF 356
           NT  D+GV+LESTSFYAEQGGQ+F
Sbjct: 203 NTGDDIGVVLESTSFYAEQGGQIF 274


>TC228048 homologue to UP|Q8LA44 (Q8LA44) Receptor protein kinase-like
           protein, partial (46%)
          Length = 1208

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 21/81 (25%), Positives = 40/81 (48%)
 Frame = +2

Query: 176 ANVLGDVFPELKQQEVHIRNVIQEEEESFGRTLVKGIAKFKTAVGHVQGNILSGEATFEL 235
           AN+L D + E    +  +  ++ + ++S   T V+G       VGH+    LS   + E 
Sbjct: 332 ANILLDDYCEAVVGDFGLAKLL-DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEK 490

Query: 236 WDTYGFPLDLTQLMAEEKKLK 256
            D +GF + L +L+  ++ L+
Sbjct: 491 TDVFGFGILLLELITGQRALE 553


>BG510271 
          Length = 420

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 14/46 (30%), Positives = 23/46 (49%)
 Frame = +1

Query: 211 GIAKFKTAVGHVQGNILSGEATFELWDTYGFPLDLTQLMAEEKKLK 256
           G+ KF  AVG+V   +  G    E  D Y F + L +L+   + ++
Sbjct: 184 GLTKFHNAVGYVAPELAQGLRQSEKCDVYSFGVILLELVTGRRPVE 321


>TC217874 similar to UP|Q8GTM7 (Q8GTM7) Putataive glucan
           1,3-beta-glucosidase, partial (46%)
          Length = 1616

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
 Frame = +3

Query: 278 NKQAGGAIVMDADATSALQKRSIVPTDDSFKFASFRD---------HETVVKAIYTGSEF 328
           N+  G  +V D+D+ S ++   I+ +DD       R           E VV A Y GS +
Sbjct: 390 NQNGGSNLVADSDSPSDMETFEILRSDDDPNMVRIRAPNGQFLQAISENVVLANYEGSSW 569

Query: 329 VDS 331
            DS
Sbjct: 570 DDS 578


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.322    0.138    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,998,131
Number of Sequences: 63676
Number of extensions: 148342
Number of successful extensions: 640
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of query: 374
length of database: 12,639,632
effective HSP length: 99
effective length of query: 275
effective length of database: 6,335,708
effective search space: 1742319700
effective search space used: 1742319700
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)