TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144765.14 - phase: 0 
         (113 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC225113 similar to UP|Q8LDN5 (Q8LDN5) Topoisomerase-like protei...    28  0.64
TC228434 similar to UP|Q8LDN5 (Q8LDN5) Topoisomerase-like protei...    28  0.64
TC225131 similar to UP|Q9FMK4 (Q9FMK4) Topoisomerase-like protei...    28  0.64
TC229523 similar to UP|Q6IEL5 (Q6IEL5) WRKY transcription factor...    27  1.1
BE824460                                                               27  1.4
TC212697 weakly similar to UP|O13633 (O13633) HLJ1 PROTEIN (SPBC...    27  1.4
TC203888 homologue to UP|DHSA_ARATH (O82663) Succinate dehydroge...    27  1.9
CO985754                                                               27  1.9
TC211467                                                               26  3.2
BE211605 homologue to SP|O24543|AX2E_ Auxin-induced protein 22E ...    26  3.2
TC223547                                                               25  4.2
AW597133                                                               25  4.2
TC223257                                                               25  5.5
TC231415 homologue to UP|Q7X084 (Q7X084) Ribulose-1,5-bisphospha...    25  5.5
TC235010 homologue to GB|AAD04176.1|4139230|AF109243 mismatch re...    25  7.1
AI443260 weakly similar to GP|18072829|emb prenylated Rab recept...    25  7.1
TC207611 UP|Q9S7N8 (Q9S7N8) Seed maturation protein PM21 (Seed m...    25  7.1
TC207930 similar to UP|O49459 (O49459) Predicted protein, partia...    24  9.3
TC209973                                                               24  9.3
TC206408 similar to UP|Q9LRY5 (Q9LRY5) Gb|AAF16548.1 (AT3g24740/...    24  9.3

>TC225113 similar to UP|Q8LDN5 (Q8LDN5) Topoisomerase-like protein, partial
           (22%)
          Length = 793

 Score = 28.1 bits (61), Expect = 0.64
 Identities = 13/32 (40%), Positives = 18/32 (55%)
 Frame = +1

Query: 35  LEDANAILREAAEIFEGLGMVDSAAQCFTDLG 66
           +EDA   + +  E +E  G+V  A QC  DLG
Sbjct: 109 VEDAKDKIMKLLEEYESGGVVSEACQCIRDLG 204


>TC228434 similar to UP|Q8LDN5 (Q8LDN5) Topoisomerase-like protein, partial
           (34%)
          Length = 1078

 Score = 28.1 bits (61), Expect = 0.64
 Identities = 13/32 (40%), Positives = 18/32 (55%)
 Frame = +2

Query: 35  LEDANAILREAAEIFEGLGMVDSAAQCFTDLG 66
           +EDA   + +  E +E  G+V  A QC  DLG
Sbjct: 347 VEDAKDKIMKLLEEYESGGVVSEACQCIRDLG 442


>TC225131 similar to UP|Q9FMK4 (Q9FMK4) Topoisomerase-like protein, partial
           (47%)
          Length = 1421

 Score = 28.1 bits (61), Expect = 0.64
 Identities = 13/32 (40%), Positives = 18/32 (55%)
 Frame = +2

Query: 35  LEDANAILREAAEIFEGLGMVDSAAQCFTDLG 66
           +EDA   + +  E +E  G+V  A QC  DLG
Sbjct: 698 VEDAKDKIMKLLEEYESGGVVSEACQCIRDLG 793


>TC229523 similar to UP|Q6IEL5 (Q6IEL5) WRKY transcription factor 66, partial
           (13%)
          Length = 523

 Score = 27.3 bits (59), Expect = 1.1
 Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
 Frame = +2

Query: 14  WGKKSKAASLRATAIRLHDLNLEDANAILREAAEIFEGLGMVDSAAQCFTDLGDYERAGI 73
           W  K   A+LR        L LE+      +   I +GL  V    + F+     E    
Sbjct: 272 WQAKE*RATLRF-------LVLEEIWTKTNQRVSISKGLLQVQHIQRLFSQKASREMQNG 430

Query: 74  NFNFGIHVYSFM--SFSIKKHYDILEHK 99
            FN   H+Y +   S S   HY I  HK
Sbjct: 431 CFNAHNHIYLYT*PSMSHSHHYKIYHHK 514


>BE824460 
          Length = 654

 Score = 26.9 bits (58), Expect = 1.4
 Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 14/48 (29%)
 Frame = -2

Query: 80  HVYSFMSFSI--------------KKHYDILEHKYQVYPTWSYIVFIC 113
           H+++F+ +SI              K H ++   +++V P W  I+ +C
Sbjct: 485 HIFNFIYYSIVVIICVVINIFFFFKSHEEVKRFRFKVIPNWDDIIDLC 342


>TC212697 weakly similar to UP|O13633 (O13633) HLJ1 PROTEIN (SPBC17A3.05c
           protein) (Pi041 protein), partial (10%)
          Length = 741

 Score = 26.9 bits (58), Expect = 1.4
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 8   RAGDSYWGKKSKAASLRATAIRLHDLNLEDANAILREAAEIFEGLGM 54
           R G   W   ++ A LRA    L  LNL+ A A+ R A++    +G+
Sbjct: 477 RCGQRRW---ARLAYLRADLALLEALNLDSAMALRRSASDSASAIGI 608


>TC203888 homologue to UP|DHSA_ARATH (O82663) Succinate dehydrogenase
           [ubiquinone] flavoprotein subunit, mitochondrial  (FP)
           (Flavoprotein subunit of complex II) , partial (94%)
          Length = 2344

 Score = 26.6 bits (57), Expect = 1.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 70  RAGINFNFGIHVYSFMSFSIKKHYDILEHKY 100
           R+  N + G H Y F S      Y +++H Y
Sbjct: 219 RSTSNHSLGSHFYRFFSSGANSSYTVVDHTY 311


>CO985754 
          Length = 823

 Score = 26.6 bits (57), Expect = 1.9
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -2

Query: 82  YSFMSFSIKKHYDILEHKYQVYPTWSYIVF 111
           +S +S +IKKHY I+++KY VY  +  + +
Sbjct: 126 HSLLSCNIKKHY*IIKNKY-VYSKFXXLCY 40


>TC211467 
          Length = 669

 Score = 25.8 bits (55), Expect = 3.2
 Identities = 8/26 (30%), Positives = 15/26 (56%)
 Frame = +3

Query: 88  SIKKHYDILEHKYQVYPTWSYIVFIC 113
           S K H ++   +++V P W  I+ +C
Sbjct: 216 SYKSHEEVKRFRFKVIPNWDDIIDLC 293


>BE211605 homologue to SP|O24543|AX2E_ Auxin-induced protein 22E
           (Indole-3-acetic acid induced protein ARG14). [Mung bean
            Vigna radiata], partial (26%)
          Length = 411

 Score = 25.8 bits (55), Expect = 3.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 90  KKHYDILEHKYQVYPTWSYIVFI 112
           K  ++I ++KY +Y T  YI+FI
Sbjct: 312 KXSHNIFKYKYPLYYTSKYIIFI 380


>TC223547 
          Length = 461

 Score = 25.4 bits (54), Expect = 4.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 82  YSFMSFSIKKHYDILEHKYQVYPTWSYIVFI 112
           Y ++S    K Y I+EH    Y +W Y  ++
Sbjct: 350 YCYLSDCFLKQYTIVEHSPIRYHSWVYWTYV 442


>AW597133 
          Length = 218

 Score = 25.4 bits (54), Expect = 4.2
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = -2

Query: 69  ERAGINFNFGIH-----VYSFMSFSIKKHYDI-LEHKYQVYPTWSYIVF 111
           +R GI+  + +H      Y+ +S  IK HY + L  +   Y  W ++ F
Sbjct: 184 QRRGISVQWQVHKLV*HYYNALSLQIKHHYIVSLNLQISAYKEWFWLNF 38


>TC223257 
          Length = 518

 Score = 25.0 bits (53), Expect = 5.5
 Identities = 12/28 (42%), Positives = 16/28 (56%), Gaps = 1/28 (3%)
 Frame = +2

Query: 73 INFNFGIHVYSFMS-FSIKKHYDILEHK 99
          ++ N  + +Y F   FSIK H  IL HK
Sbjct: 26 VSLNLIVKIYCFFHLFSIKSHKIILHHK 109


>TC231415 homologue to UP|Q7X084 (Q7X084) Ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit (Fragment), partial
           (5%)
          Length = 699

 Score = 25.0 bits (53), Expect = 5.5
 Identities = 10/29 (34%), Positives = 16/29 (54%)
 Frame = +3

Query: 84  FMSFSIKKHYDILEHKYQVYPTWSYIVFI 112
           ++S  + K Y ILEH+   Y  W Y  ++
Sbjct: 525 YLSDCLLKQYTILEHRPIRYHPWVYWTYV 611


>TC235010 homologue to GB|AAD04176.1|4139230|AF109243 mismatch repair
          protein {Arabidopsis thaliana;} , partial (7%)
          Length = 760

 Score = 24.6 bits (52), Expect = 7.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 55 VDSAAQCFTDLGDYERAGINFNFGIHVYSFMSF 87
          +DS+ +  T L   E    + +FGIHV  F +F
Sbjct: 57 IDSSXRKLTMLYKVEPGACDQSFGIHVAEFANF 155


>AI443260 weakly similar to GP|18072829|emb prenylated Rab receptor 4
           {Arabidopsis thaliana}, partial (22%)
          Length = 385

 Score = 24.6 bits (52), Expect = 7.1
 Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 2/30 (6%)
 Frame = +3

Query: 78  GIHVYSF--MSFSIKKHYDILEHKYQVYPT 105
           G H+ SF  + FSIK H+     K+Q+ PT
Sbjct: 45  GQHLSSFFILKFSIKSHHIPFMPKFQI*PT 134


>TC207611 UP|Q9S7N8 (Q9S7N8) Seed maturation protein PM21 (Seed maturation
           protein PM35), complete
          Length = 614

 Score = 24.6 bits (52), Expect = 7.1
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 50  EGLGMVDSAAQCFTDLGDYERAG 72
           EGL M DS    + DL DY+R G
Sbjct: 96  EGLPMEDSPYVKYKDLEDYKRQG 164


>TC207930 similar to UP|O49459 (O49459) Predicted protein, partial (62%)
          Length = 1474

 Score = 24.3 bits (51), Expect = 9.3
 Identities = 9/21 (42%), Positives = 15/21 (70%)
 Frame = +2

Query: 74   NFNFGIHVYSFMSFSIKKHYD 94
            +FNF +HVYS   F + ++Y+
Sbjct: 1292 DFNFRVHVYS*NVFILYRYYN 1354


>TC209973 
          Length = 889

 Score = 24.3 bits (51), Expect = 9.3
 Identities = 9/22 (40%), Positives = 13/22 (58%)
 Frame = -1

Query: 80  HVYSFMSFSIKKHYDILEHKYQ 101
           H +S + +   KH+ IL H YQ
Sbjct: 634 HHFSHLFYGQAKHFPILGHSYQ 569


>TC206408 similar to UP|Q9LRY5 (Q9LRY5) Gb|AAF16548.1 (AT3g24740/K7P8_3),
           partial (44%)
          Length = 903

 Score = 24.3 bits (51), Expect = 9.3
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = +3

Query: 8   RAGDSYWGKKSKAASLRA-----TAIRLHDLNLEDANAILREAAE 47
           RA  S W +  +++  R      + + LHD ++ED   I R+A E
Sbjct: 561 RAHSSAWTRHRRSSERRRYLWGESLLGLHDNDIEDDLRIFRDAGE 695


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.325    0.138    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,086,909
Number of Sequences: 63676
Number of extensions: 53457
Number of successful extensions: 383
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of query: 113
length of database: 12,639,632
effective HSP length: 89
effective length of query: 24
effective length of database: 6,972,468
effective search space: 167339232
effective search space used: 167339232
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)