TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144724.5 - phase: 0 /pseudo
         (534 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC219850 weakly similar to UP|Q9FKI5 (Q9FKI5) Emb|CAB69839.1, pa...    31  1.6
TC205629 similar to UP|Q9LEX1 (Q9LEX1) CaLB protein (At3g61050),...    30  2.7
TC227185 homologue to UP|Q6RUF6 (Q6RUF6) Fructose-bisphosphate a...    30  3.5
TC208851 UP|Q7PG82 (Q7PG82) ENSANGP00000024412 (Fragment), parti...    30  3.5
BG840084                                                               29  4.6
TC206966 similar to UP|Q94EI3 (Q94EI3) AT5g17550/K10A8_30, parti...    29  4.6
TC206421 homologue to UP|Q93XV7 (Q93XV7) Hydroxypyruvate reducta...    29  6.0
TC232573                                                               28  7.8

>TC219850 weakly similar to UP|Q9FKI5 (Q9FKI5) Emb|CAB69839.1, partial (53%)
          Length = 1153

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 465  IFNYLQKDLRCTTSNFFPTMELSMSDLIGICIIKK 499
            IF Y  K L+   SN+ P   +S SDL  +C I++
Sbjct: 1063 IFXYTSKCLKKQASNYSPVSNISASDLATVCKIER 959


>TC205629 similar to UP|Q9LEX1 (Q9LEX1) CaLB protein (At3g61050), partial (92%)
          Length = 1766

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/69 (26%), Positives = 24/69 (34%)
 Frame = +3

Query: 369  WTWC*ACRG*IPWVRY*WIGRLSLCNSCMKEKW*RCWGKVASRRNTVISTHFWGTNKVGW 428
            W WC  CR                C SC K  W  CW +   +R+   S + W  +   W
Sbjct: 1230 WYWC-CCR----------------CRSCGKWYW--CWSRACWKRHRCWSWYCWEWSWSRW 1352

Query: 429  EWIGGGLNI 437
             W   G  +
Sbjct: 1353 *WTEQGREV 1379


>TC227185 homologue to UP|Q6RUF6 (Q6RUF6) Fructose-bisphosphate aldolase  ,
           complete
          Length = 1435

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/59 (28%), Positives = 25/59 (41%), Gaps = 8/59 (13%)
 Frame = -1

Query: 401 W*RCWGKVASRRNTVISTHFW--------GTNKVGWEWIGGGLNIISLRVMKLQCQKSF 451
           W R W   A   N V+S H W        G+N VG E      +++ +  +   C+ SF
Sbjct: 826 WHRSWDSPAECLNCVLSNHLWWYLWAIRAGSNHVGLEKSSFKKDMLLIECLVNSCKHSF 650


>TC208851 UP|Q7PG82 (Q7PG82) ENSANGP00000024412 (Fragment), partial (25%)
          Length = 482

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 186 KKKERTRQDLRSGKGSATSTTTRWRKEGPRAYASSVGVSI 225
           +++ER R+  R    S  STT   R  GPR+ A+ V VS+
Sbjct: 65  RERERERERERERASSKPSTTGESRGRGPRSSATPVTVSL 184


>BG840084 
          Length = 381

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 420 FWGTNKVGWEWIGGGLNII 438
           FW  N  GWEW G G++++
Sbjct: 227 FWYCNGTGWEWPGDGVDLL 283


>TC206966 similar to UP|Q94EI3 (Q94EI3) AT5g17550/K10A8_30, partial (87%)
          Length = 1018

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/32 (46%), Positives = 17/32 (52%), Gaps = 2/32 (6%)
 Frame = +3

Query: 43  WKILSKNWQH*NRVEMLKNLWRP--LNFCPRR 72
           WKI S N      +     LWRP  +NFCPRR
Sbjct: 384 WKIGSNNLSSLLALRTWNLLWRP*CINFCPRR 479


>TC206421 homologue to UP|Q93XV7 (Q93XV7) Hydroxypyruvate reductase  , complete
          Length = 1550

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = +1

Query: 434  GLNIISLRVMKLQCQKSFL---QPWNSTLQFLRIIFNYLQKDLRCTTSNFFPTMELSMSD 490
            GLN  S+R++  Q     L   +PW   LQ  +  + Y  +   CT   F      S++ 
Sbjct: 1114 GLNHSSMRMLNHQLHPQALLMQKPWVCQLQSYKHTWFYPTRAFNCTNDQFLSVELGSVAS 1293

Query: 491  LIGICI 496
            L+  C+
Sbjct: 1294 LLFFCV 1311


>TC232573 
          Length = 497

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 386 WIGRLSLCNSCMKEKW*RCWGKVASRRNTV 415
           W+   S   SC+  K  RCW KVAS + T+
Sbjct: 336 WLLHWSQGISCVAHKRIRCWKKVASSQTTI 247


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.357    0.157    0.630 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,040,890
Number of Sequences: 63676
Number of extensions: 447457
Number of successful extensions: 5010
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2712
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 2228
Number of HSP's gapped (non-prelim): 3030
length of query: 534
length of database: 12,639,632
effective HSP length: 102
effective length of query: 432
effective length of database: 6,144,680
effective search space: 2654501760
effective search space used: 2654501760
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.7 bits)
S2: 61 (28.1 bits)