
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144720.4 + phase: 0
(83 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC203421 similar to GB|AAO63375.1|28950903|BT005311 At3g10360 {A... 120 1e-28
TC204308 similar to GB|AAG31805.1|11139702|AF315590 Pumilio 2 {M... 105 5e-24
TC204305 similar to GB|AAG31805.1|11139702|AF315590 Pumilio 2 {M... 104 7e-24
TC204306 similar to GB|AAG31805.1|11139702|AF315590 Pumilio 2 {M... 102 3e-23
TC204309 77 2e-15
TC203289 similar to GB|AAB61025.1|2191138|IG002N01 coded for by ... 74 1e-14
TC219194 similar to UP|Q9SVZ7 (Q9SVZ7) Pumilio-like protein, par... 74 2e-14
TC209647 weakly similar to UP|Q9SVZ7 (Q9SVZ7) Pumilio-like prote... 71 8e-14
AW830951 weakly similar to GP|9293981|dbj RNA binding protein-li... 36 0.003
AW472289 similar to GP|8809626|dbj| contains similarity to RNA-b... 36 0.004
BE823345 31 0.13
BM528619 31 0.13
TC206771 similar to UP|Q9NYU2 (Q9NYU2) UDP-glucose:glycoprotein ... 30 0.22
CF921964 29 0.48
TC203834 weakly similar to UP|Q8LLB9 (Q8LLB9) BPM, partial (26%) 28 0.82
TC222765 27 1.4
BE473416 25 6.9
TC229923 weakly similar to UP|Q93Z11 (Q93Z11) AT5g37360/MNJ8_150... 25 6.9
TC232258 similar to UP|Q9SBS1 (Q9SBS1) Ran GTPase activating pro... 25 6.9
>TC203421 similar to GB|AAO63375.1|28950903|BT005311 At3g10360 {Arabidopsis
thaliana;} , partial (86%)
Length = 1218
Score = 120 bits (301), Expect = 1e-28
Identities = 60/67 (89%), Positives = 62/67 (91%)
Frame = +3
Query: 1 MQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTG 60
+QAMMKDPFGNYVVQKVLETCDD+SLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTG
Sbjct: 654 LQAMMKDPFGNYVVQKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTG 833
Query: 61 GNECKLL 67
LL
Sbjct: 834 ERRIGLL 854
Score = 38.9 bits (89), Expect = 5e-04
Identities = 17/52 (32%), Positives = 32/52 (60%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 AMMKDPFGNYVVQKVLETCDDQSL-ELILSRIKVHLNALKRYTYGKHIVSRV 53
A+ P+G V+Q+VLE CDDQ+ ++I+ I ++ L + YG +++ +
Sbjct: 315 ALSTHPYGCRVIQRVLEHCDDQNTQQIIMEEIMQSVSTLAQDQYGNYVIQHI 470
Score = 34.3 bits (77), Expect = 0.011
Identities = 15/49 (30%), Positives = 27/49 (54%)
Frame = +3
Query: 5 MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRV 53
++D GN+V+QK +E ++ I+S + AL + YG ++ RV
Sbjct: 213 VRDQNGNHVIQKCIECVPQDKIQFIVSSFYGQVVALSTHPYGCRVIQRV 359
Score = 30.8 bits (68), Expect = 0.13
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 7 DPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLI 57
D FGNYV+QK E + + + +++ H+ L YG ++ + +++
Sbjct: 3 DVFGNYVIQKFFEHGTESQRKELANQLTGHVLPLSLQMYGCRVIQKALEVV 155
Score = 28.5 bits (62), Expect = 0.63
Identities = 13/63 (20%), Positives = 31/63 (48%)
Frame = +3
Query: 1 MQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTG 60
+ + +D +GNYV+Q ++E I+S++ + + + + ++ +EK + G
Sbjct: 420 VSTLAQDQYGNYVIQHIVEHGKPHERTTIISKLAGQIVKMSQQKFASNV---IEKCLAFG 590
Query: 61 GNE 63
E
Sbjct: 591 SPE 599
>TC204308 similar to GB|AAG31805.1|11139702|AF315590 Pumilio 2 {Mus
musculus;} , partial (15%)
Length = 1311
Score = 105 bits (261), Expect = 5e-24
Identities = 50/60 (83%), Positives = 54/60 (89%)
Frame = +2
Query: 1 MQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTG 60
+QAMMKD F NYVVQKVLETCDDQ ELILSRIKVHLNALK+YTYGKHIV+RVEKL+ G
Sbjct: 608 LQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAG 787
Score = 32.7 bits (73), Expect = 0.033
Identities = 14/49 (28%), Positives = 27/49 (54%)
Frame = +2
Query: 5 MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRV 53
++D GN+V+QK +E + ++ I+S + L + YG ++ RV
Sbjct: 167 VRDQNGNHVIQKCIECVPEDAINFIVSTFFDQVVTLSTHPYGCRVIQRV 313
Score = 31.2 bits (69), Expect = 0.097
Identities = 17/58 (29%), Positives = 29/58 (49%)
Frame = +2
Query: 4 MMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGG 61
+ +D +GNYVVQ VLE I+ + + + + + ++ VEK +T GG
Sbjct: 383 LAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNV---VEKCLTFGG 547
Score = 30.0 bits (66), Expect = 0.22
Identities = 15/47 (31%), Positives = 27/47 (56%), Gaps = 1/47 (2%)
Frame = +2
Query: 8 PFGNYVVQKVLETC-DDQSLELILSRIKVHLNALKRYTYGKHIVSRV 53
P+G V+Q+VLE C D + + ++ I ++ L + YG ++V V
Sbjct: 284 PYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHV 424
>TC204305 similar to GB|AAG31805.1|11139702|AF315590 Pumilio 2 {Mus
musculus;} , partial (15%)
Length = 1359
Score = 104 bits (260), Expect = 7e-24
Identities = 50/60 (83%), Positives = 54/60 (89%)
Frame = +3
Query: 1 MQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTG 60
+QAMMKD F NYVVQKVLETCDDQ ELILSRIKVHLNALK+YTYGKHIV+RVEKL+ G
Sbjct: 693 LQAMMKDQFANYVVQKVLETCDDQHRELILSRIKVHLNALKKYTYGKHIVTRVEKLVAAG 872
Score = 33.5 bits (75), Expect = 0.020
Identities = 14/49 (28%), Positives = 28/49 (56%)
Frame = +3
Query: 5 MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRV 53
++D GN+V+QK +E + +++ I+S + L + YG ++ RV
Sbjct: 252 VRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRV 398
Score = 33.1 bits (74), Expect = 0.025
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Frame = +3
Query: 3 AMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIV----------SR 52
A+M D FGNYVVQK E + +++ H+ L YG ++ +
Sbjct: 30 ALMTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEVVDLDQK 209
Query: 53 VEKLITTGGNECKLLRYMNSHLLSLNC 79
+E + GN + +R N + + C
Sbjct: 210 IEMVQELDGNVMRCVRDQNGNHVIQKC 290
Score = 31.2 bits (69), Expect = 0.097
Identities = 15/47 (31%), Positives = 28/47 (58%), Gaps = 1/47 (2%)
Frame = +3
Query: 8 PFGNYVVQKVLETCDDQSL-ELILSRIKVHLNALKRYTYGKHIVSRV 53
P+G V+Q+VLE C+D + + ++ I ++ L + YG ++V V
Sbjct: 369 PYGCRVIQRVLEHCEDPTTQQKVMDEILGAVSMLAQDQYGNYVVQHV 509
Score = 30.8 bits (68), Expect = 0.13
Identities = 17/58 (29%), Positives = 29/58 (49%)
Frame = +3
Query: 4 MMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGG 61
+ +D +GNYVVQ VLE I+ + + + + + ++ VEK +T GG
Sbjct: 468 LAQDQYGNYVVQHVLEHGKPHERSSIIKELAGKIVQMSQQKFASNV---VEKCLTFGG 632
>TC204306 similar to GB|AAG31805.1|11139702|AF315590 Pumilio 2 {Mus
musculus;} , partial (3%)
Length = 689
Score = 102 bits (255), Expect = 3e-23
Identities = 49/60 (81%), Positives = 53/60 (87%)
Frame = +2
Query: 1 MQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTG 60
+QAMMKD F NYVVQKVLETCDDQ ELIL RIKVHLNALK+YTYGKHIV+RVEKL+ G
Sbjct: 80 LQAMMKDQFANYVVQKVLETCDDQQRELILYRIKVHLNALKKYTYGKHIVARVEKLVAAG 259
>TC204309
Length = 634
Score = 77.0 bits (188), Expect = 2e-15
Identities = 36/42 (85%), Positives = 38/42 (89%)
Frame = +1
Query: 19 ETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTG 60
ETCDDQ ELILSRIKVHLNALK+YTYGKHIVSRVEKL+ G
Sbjct: 1 ETCDDQQRELILSRIKVHLNALKKYTYGKHIVSRVEKLVAAG 126
>TC203289 similar to GB|AAB61025.1|2191138|IG002N01 coded for by A. thaliana
cDNA T46771; coded for by A. thaliana cDNA N97218; coded
for by A. thaliana cDNA T41776; coded for by A. thaliana
cDNA T42436; coded for by A. thaliana cDNA H37214; coded
for by A. thaliana cDNA AA042240; coded for by A.
thaliana cDNA T21099; coded for by A. thaliana cDNA
T21088; coded for by A. thaliana cDNA R65156; coded for
by A. thaliana cDNA H36209; coded for by A. thaliana
cDNA T20742 {Arabidopsis thaliana;} , partial (65%)
Length = 1399
Score = 73.9 bits (180), Expect = 1e-14
Identities = 38/44 (86%), Positives = 39/44 (88%)
Frame = -3
Query: 24 QSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGGNECKLL 67
+SLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTG LL
Sbjct: 533 RSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGLL 402
>TC219194 similar to UP|Q9SVZ7 (Q9SVZ7) Pumilio-like protein, partial (38%)
Length = 1941
Score = 73.6 bits (179), Expect = 2e-14
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +1
Query: 4 MMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLI 57
MMKD F NYV+QKV E C + +LSRI++H +ALK+YTYGKHIV+R E+L+
Sbjct: 1426 MMKDQFANYVIQKVFEICSENQRATLLSRIRLHAHALKKYTYGKHIVARFEQLL 1587
Score = 36.2 bits (82), Expect = 0.003
Identities = 14/49 (28%), Positives = 30/49 (60%)
Frame = +1
Query: 5 MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRV 53
++D GN+V+QK +E+ ++++ I+S + + L + YG ++ RV
Sbjct: 976 VRDQNGNHVIQKCIESIPTKNIDFIISAFRGQIALLSMHPYGCRVIQRV 1122
Score = 33.9 bits (76), Expect = 0.015
Identities = 14/49 (28%), Positives = 27/49 (54%)
Frame = +1
Query: 4 MMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSR 52
+ +D +GNYV Q VLE Q I+ ++ H+ L ++ + ++V +
Sbjct: 1192 LAQDQYGNYVTQHVLERGKPQERSQIIHKLSGHIFQLSQHKFASNVVEK 1338
Score = 31.6 bits (70), Expect = 0.074
Identities = 15/54 (27%), Positives = 27/54 (49%)
Frame = +1
Query: 4 MMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLI 57
+M D FGNYV+QK E + + + +R+ + L YG ++ + + I
Sbjct: 757 LMTDVFGNYVIQKFFEYGSPEQRKELANRLLGQIPPLSLQMYGCRVIQKALEAI 918
>TC209647 weakly similar to UP|Q9SVZ7 (Q9SVZ7) Pumilio-like protein, partial
(20%)
Length = 684
Score = 71.2 bits (173), Expect = 8e-14
Identities = 29/51 (56%), Positives = 41/51 (79%)
Frame = +1
Query: 4 MMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVE 54
MMKD F NYVVQKV++ C + ++LS +++H +ALK+YTYGKHIV+R+E
Sbjct: 364 MMKDQFANYVVQKVIDICSENQRAMLLSHVRIHAHALKKYTYGKHIVARLE 516
Score = 38.1 bits (87), Expect = 8e-04
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 3 AMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSR 52
A+ +D +GNYV Q VLE Q ILS++ H+ L ++ + ++V +
Sbjct: 127 ALAQDQYGNYVTQHVLERGKPQERSQILSKLSGHIVQLSQHKFASNVVEK 276
Score = 33.1 bits (74), Expect = 0.025
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 8 PFGNYVVQKVLETCDDQS-LELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGGNECKL 66
P+G V+Q+VLE C D+S + I+ I + AL + YG ++ V + ++
Sbjct: 31 PYGCRVIQRVLEHCTDESQCQFIVDEILESVCALAQDQYGNYVTQHVLER-GKPQERSQI 207
Query: 67 LRYMNSHLLSLNCSDFS 83
L ++ H++ L+ F+
Sbjct: 208 LSKLSGHIVQLSQHKFA 258
>AW830951 weakly similar to GP|9293981|dbj RNA binding protein-like
{Arabidopsis thaliana}, partial (12%)
Length = 358
Score = 36.2 bits (82), Expect = 0.003
Identities = 15/49 (30%), Positives = 30/49 (60%)
Frame = +2
Query: 5 MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRV 53
++D GN+V+QK +E+ ++++ ILS + + L + YG ++ RV
Sbjct: 107 VRDQNGNHVIQKCIESIPTKNIDFILSAFRGQIALLSMHPYG*RVIHRV 253
>AW472289 similar to GP|8809626|dbj| contains similarity to RNA-binding
protein~gene_id:MKN22.2 {Arabidopsis thaliana}, partial
(12%)
Length = 435
Score = 35.8 bits (81), Expect = 0.004
Identities = 14/28 (50%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +3
Query: 4 MMKDPFGNYVVQKVLETCDD-QSLELIL 30
+M +PFGNY++QK+L+ CD+ Q +++IL
Sbjct: 348 LMMNPFGNYLMQKLLDVCDEKQRMQIIL 431
>BE823345
Length = 588
Score = 30.8 bits (68), Expect = 0.13
Identities = 14/51 (27%), Positives = 25/51 (48%)
Frame = -3
Query: 2 QAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSR 52
+ +++DP NYV+Q L + L++ I+ H + Y K I S+
Sbjct: 319 EQLLQDPHANYVIQSALRHSEGHVHNLLVEAIESHKAISRNSPYSKKIFSQ 167
Score = 26.6 bits (57), Expect = 2.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -3
Query: 6 KDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSR 52
+D FGNYVVQ L+ + + + + L +G H+V +
Sbjct: 529 QDQFGNYVVQXXLDLRIPSATATLSLQFERKYVXLSMQKFGSHVVEK 389
>BM528619
Length = 426
Score = 30.8 bits (68), Expect = 0.13
Identities = 15/48 (31%), Positives = 24/48 (49%)
Frame = +1
Query: 4 MMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVS 51
+++DP NYVVQ L + + L++ I+ H + Y K I S
Sbjct: 283 LLQDPHANYVVQSALRHSEGRLHNLLVEAIESHKAISRNSPYSKKIFS 426
Score = 26.9 bits (58), Expect = 1.8
Identities = 14/49 (28%), Positives = 25/49 (50%)
Frame = +1
Query: 4 MMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSR 52
+ +D FGNYVVQ +L+ + I + + + L R +G +V +
Sbjct: 61 LAQDQFGNYVVQFILDLKIPSATACIRLQFEGNYAHLSRQKFGSLVVEK 207
>TC206771 similar to UP|Q9NYU2 (Q9NYU2) UDP-glucose:glycoprotein
glucosyltransferase 1 precursor, partial (7%)
Length = 885
Score = 30.0 bits (66), Expect = 0.22
Identities = 16/53 (30%), Positives = 25/53 (46%)
Frame = +1
Query: 31 SRIKVHLNALKRYTYGKHIVSRVEKLITTGGNECKLLRYMNSHLLSLNCSDFS 83
S + HLN+L YT + + ++ G EC +L N ++ L C FS
Sbjct: 727 SNLSGHLNSLMLYTSNQPLTFFFRTIV*YNGEECWIL*MSNITVIVLTCYKFS 885
>CF921964
Length = 836
Score = 28.9 bits (63), Expect = 0.48
Identities = 14/47 (29%), Positives = 26/47 (54%)
Frame = -1
Query: 15 QKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGG 61
Q VL+ CD + L R+ +HL+AL ++ ++ V +++ GG
Sbjct: 179 QSVLQVCDQAARFLAFRRVLMHLHALCQWLELFFLLPPVHTVLSNGG 39
>TC203834 weakly similar to UP|Q8LLB9 (Q8LLB9) BPM, partial (26%)
Length = 974
Score = 28.1 bits (61), Expect = 0.82
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 2 QAMMKDPFGNYVVQKVLE 19
+A+M D FGNYV+QK E
Sbjct: 452 RALMTDVFGNYVIQKFFE 505
Score = 26.2 bits (56), Expect = 3.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 5 MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSR 52
++D GN+V+QK +E ++ I+S L + YG + R
Sbjct: 678 VRDQNGNHVIQKSIECRPQDKIQFIVSSFNGQDALLSTHPYGCRDIHR 821
>TC222765
Length = 959
Score = 27.3 bits (59), Expect = 1.4
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 27 ELILSRIKVHLNALKR-YTYGKHIVSRVEK 55
+L +S+ K+ + L+R Y YGKHI+ ++ K
Sbjct: 69 DLCISKDKLWVKVLRRKYDYGKHIIPQMNK 158
>BE473416
Length = 476
Score = 25.0 bits (53), Expect = 6.9
Identities = 13/29 (44%), Positives = 19/29 (64%)
Frame = -2
Query: 28 LILSRIKVHLNALKRYTYGKHIVSRVEKL 56
L+ SRI+ N ++RY +GK VS+ KL
Sbjct: 349 LLKSRIETRFN-IQRYNWGKSWVSQCHKL 266
>TC229923 weakly similar to UP|Q93Z11 (Q93Z11) AT5g37360/MNJ8_150, partial
(39%)
Length = 707
Score = 25.0 bits (53), Expect = 6.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 49 IVSRVEKLITTGGNECKLLRYMNSHLLSLNCS 80
+V+ V+ T N C LL+Y+ H++ C+
Sbjct: 464 LVNGVDARSTFVSNNCILLKYLTHHMVVKQCT 559
>TC232258 similar to UP|Q9SBS1 (Q9SBS1) Ran GTPase activating protein,
partial (48%)
Length = 985
Score = 25.0 bits (53), Expect = 6.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 20 TCDDQSLELILSRIKVHLNALKRYT 44
TC + LEL+ ++ +HL L+RYT
Sbjct: 189 TCLVKKLELL*VKLYLHLQILQRYT 263
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.322 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,855,332
Number of Sequences: 63676
Number of extensions: 44561
Number of successful extensions: 243
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of query: 83
length of database: 12,639,632
effective HSP length: 59
effective length of query: 24
effective length of database: 8,882,748
effective search space: 213185952
effective search space used: 213185952
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)
Medicago: description of AC144720.4