BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144645.5 - phase: 0
(254 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC219896 myb 320 3e-88
BM092559 homologue to GP|13346186|gb GHMYB10 {Gossypium hirsutum... 176 9e-45
TC203404 GmMYB16 169 1e-42
TC227045 homologue to UP|Q43525 (Q43525) Transcription factor, p... 161 3e-40
TC211252 similar to UP|Q9ATD3 (Q9ATD3) GHMYB36, partial (37%) 160 4e-40
TC207828 homologue to UP|Q6SL45 (Q6SL45) MYB6, partial (52%) 159 1e-39
TC217107 homologue to UP|Q7X9I1 (Q7X9I1) MYB transcription facto... 158 3e-39
TC218770 UP|Q9XIU5 (Q9XIU5) GmMYB29B2 protein, complete 157 4e-39
CA802875 similar to GP|13346190|gb GHMYB36 {Gossypium hirsutum},... 154 4e-38
TC218769 UP|Q9XIU8 (Q9XIU8) GmMYB29A2 protein, complete 154 4e-38
TC210216 homologue to UP|Q70KC5 (Q70KC5) MYB transcription facto... 152 1e-37
TC229681 UP|Q9S7E3 (Q9S7E3) GmMYB29A1 protein, complete 152 2e-37
TC211951 similar to GB|AAS10022.1|41619094|AY519552 MYB transcri... 150 7e-37
TC229682 UP|Q9XIU9 (Q9XIU9) GmMYB29A2 protein, complete 150 7e-37
TC216477 homologue to UP|P93474 (P93474) Myb26, partial (67%) 150 7e-37
TC211840 homologue to UP|Q8LBF0 (Q8LBF0) Myb-related protein M4,... 149 2e-36
TC229093 homologue to PIR|T51621|T51621 myb-like protein [import... 146 8e-36
TC232753 GmMYB10 145 1e-35
TC216478 similar to UP|P93474 (P93474) Myb26, partial (83%) 145 1e-35
TC218951 homologue to UP|P93474 (P93474) Myb26, partial (77%) 145 2e-35
>TC219896 myb
Length = 842
Score = 320 bits (821), Expect = 3e-88
Identities = 178/268 (66%), Positives = 197/268 (73%), Gaps = 19/268 (7%)
Frame = +3
Query: 6 KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGH 65
KE+NKGAWSREED+ LSKYV IHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGH
Sbjct: 3 KEINKGAWSREEDETLSKYVSIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGH 182
Query: 66 ISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTSSSSLPSP 125
IS DEEDMIIRLHRLLGNRW+LIAKRLPGRTDNEIKNYWNTNLS+KLQK PTSS S
Sbjct: 183 ISVDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSRKLQKHPTSSVS---- 350
Query: 126 SSVSLRHNHGKCG--HVAPEAPKPRRLKAVHQYKILEKN----------SGSEYDQG-SD 172
S RH K HVAPEAP+ RR+ AV K LE S S ++G S+
Sbjct: 351 SLQHKRHEKEKTKQMHVAPEAPRRRRVNAVEYSKNLENGGCGNRPSTTPSPSNKEEGSSE 530
Query: 173 ETSIADFFIDFDHQDQLMVGDDESNSKIPQM-EDHKVSS----TNSTHSSSSPSDHC-HL 226
E S +DF +D D D+SNSK+PQ EDH + TN++ SSSS SDHC HL
Sbjct: 531 EASFSDFLMDIDQ-------IDDSNSKVPQKEEDHHHNKVELITNNSPSSSSLSDHCHHL 689
Query: 227 LAEKFDPQEILLDVELKKMASFLGLEND 254
L EKFDP E LDVEL++MASFLG+END
Sbjct: 690 LPEKFDPFETFLDVELQRMASFLGVEND 773
>BM092559 homologue to GP|13346186|gb GHMYB10 {Gossypium hirsutum}, partial
(38%)
Length = 421
Score = 176 bits (446), Expect = 9e-45
Identities = 79/123 (64%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
Frame = +2
Query: 4 SPKEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKR 63
S + +N+GAW+ ED IL +Y+ +HGEG+W+ + + AGLKRCGKSCR RWLNYL+P IKR
Sbjct: 20 SKEGLNRGAWTAHEDKILREYIRVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKR 199
Query: 64 GHISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQK-QPTSSSSL 122
G+IS DEE++IIRLH+LLGNRWSLIA RLPGRTDNEIKNYWNTNL KK++ T++++
Sbjct: 200 GNISPDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDGHQTTANNT 379
Query: 123 PSP 125
+P
Sbjct: 380 QNP 388
>TC203404 GmMYB16
Length = 1138
Score = 169 bits (428), Expect = 1e-42
Identities = 82/162 (50%), Positives = 111/162 (67%)
Frame = +1
Query: 8 VNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGHIS 67
++KG W+ +ED +L+KY+ HGEG+W+ + + AGL RCGKSCR RW+NYL+P IKRG+I+
Sbjct: 139 LHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNIA 318
Query: 68 TDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTSSSSLPSPSS 127
+E+D+IIR+H LLGNRWSLIA RLPGRTDNEIKNYWNT+LSKKL+ Q T + +
Sbjct: 319 PEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLKIQGTEDTD----TH 486
Query: 128 VSLRHNHGKCGHVAPEAPKPRRLKAVHQYKILEKNSGSEYDQ 169
L + + K ++ K K +KN G E D+
Sbjct: 487 KMLENPQEEAASDGGNNNKKKKKKKNGGKKNKQKNKGKENDE 612
>TC227045 homologue to UP|Q43525 (Q43525) Transcription factor, partial (55%)
Length = 560
Score = 161 bits (407), Expect = 3e-40
Identities = 79/151 (52%), Positives = 102/151 (67%), Gaps = 12/151 (7%)
Frame = +3
Query: 1 MVRSP----KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNY 56
M RSP NKGAW++EED L Y+ HGEG W+ + + AGL RCGKSCR RW+NY
Sbjct: 15 MGRSPCCEKAHTNKGAWTKEEDHRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 194
Query: 57 LKPGIKRGHISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKL---- 112
L+P +KRG+ S +E+ +II+LH LLGN+WSLIA RLPGRTDNEIKNYWNT++ +KL
Sbjct: 195 LRPDLKRGNFSLEEDQLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 374
Query: 113 ----QKQPTSSSSLPSPSSVSLRHNHGKCGH 139
+P + SS P++VS H + H
Sbjct: 375 IDPATHRPLNDSSHQEPAAVSAPPKHQESFH 467
>TC211252 similar to UP|Q9ATD3 (Q9ATD3) GHMYB36, partial (37%)
Length = 819
Score = 160 bits (406), Expect = 4e-40
Identities = 71/115 (61%), Positives = 89/115 (76%)
Frame = +1
Query: 12 AWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGHISTDEE 71
AWS ED+IL YV + GEG W+ + + AGLKRCG+SC+QRWLNYLKP I RG+IS DE
Sbjct: 34 AWSSHEDEILLNYVQVRGEGNWRNLPKRAGLKRCGESCKQRWLNYLKPTISRGNISLDEH 213
Query: 72 DMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTSSSSLPSPS 126
++IIRLH+LLGNRWS+IA RLPGRT+ EIKNYWNT L K+ ++ + + PS S
Sbjct: 214 ELIIRLHKLLGNRWSIIAGRLPGRTEEEIKNYWNTYLRKEAEENQNNKNEFPSTS 378
>TC207828 homologue to UP|Q6SL45 (Q6SL45) MYB6, partial (52%)
Length = 999
Score = 159 bits (402), Expect = 1e-39
Identities = 95/249 (38%), Positives = 137/249 (54%), Gaps = 15/249 (6%)
Frame = +2
Query: 1 MVRSP----KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNY 56
M RSP + NKGAW++EED+ L Y+ +HGEG W+ + + AGL RCGKSCR RW+NY
Sbjct: 41 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINY 220
Query: 57 LKPGIKRGHISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQK-- 114
L+P +KRG+ + +E+++II LH LLGN+WSLIA RLPGRTDNEIKNYWNT++ +KL
Sbjct: 221 LRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRG 400
Query: 115 ------QPTSSSSLPSPSSVSLRHNHGKCGHVAPEAPKPRRLKAVHQYKILEKNSGSEYD 168
+P +++S ++V+ A P K KI N+ +
Sbjct: 401 IDPQTHRPLNAASATPATTVT-----------ATAVPSSNSKK-----KIKNNNNNNNGF 532
Query: 169 QGSDETSIADFFIDFDHQDQLMVGDDESNSKIPQMED---HKVSSTNSTHSSSSPSDHCH 225
Q + ++ A+ I D + D S+S + E H+++ S S P
Sbjct: 533 QLVNNSAYANTKIG---TDMIAAEDSNSSSGVTTEESFPHHQLNLDLSIGLPSQPQVSSS 703
Query: 226 LLAEKFDPQ 234
L EK P+
Sbjct: 704 LNPEKLKPE 730
>TC217107 homologue to UP|Q7X9I1 (Q7X9I1) MYB transcription factor R2R3 type,
partial (68%)
Length = 1058
Score = 158 bits (399), Expect = 3e-39
Identities = 71/116 (61%), Positives = 91/116 (78%), Gaps = 4/116 (3%)
Frame = +2
Query: 1 MVRSP----KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNY 56
M RSP NKGAW++EEDD L Y+ HGEG W+ + + AGL RCGKSCR RW+NY
Sbjct: 266 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 445
Query: 57 LKPGIKRGHISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKL 112
L+P +KRG+ + +E+++II+LH LLGN+WSLIA RLPGRTDNEIKNYWNT++ +KL
Sbjct: 446 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 613
>TC218770 UP|Q9XIU5 (Q9XIU5) GmMYB29B2 protein, complete
Length = 1316
Score = 157 bits (397), Expect = 4e-39
Identities = 75/171 (43%), Positives = 103/171 (59%), Gaps = 4/171 (2%)
Frame = +1
Query: 1 MVRSP----KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNY 56
MVR+P + KG W+ EED IL+ Y+ HG G W+ + + AGL RCGKSCR RW+NY
Sbjct: 112 MVRAPCCEKMGLKKGPWATEEDQILTSYIQKHGHGNWRALPKQAGLLRCGKSCRLRWINY 291
Query: 57 LKPGIKRGHISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQP 116
L+P IKRG+ + +EE+ II+LH +LGNRWS IA +LPGRTDNEIKN W+TNL K+L K
Sbjct: 292 LRPDIKRGNFTIEEEETIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTNLKKRLLKSD 471
Query: 117 TSSSSLPSPSSVSLRHNHGKCGHVAPEAPKPRRLKAVHQYKILEKNSGSEY 167
S S + ++ + + P R + + S S++
Sbjct: 472 QSKPSSKRATKPKIKRSDSNSSIITQSEPAHLRFREMDTTSTACNTSSSDF 624
>CA802875 similar to GP|13346190|gb GHMYB36 {Gossypium hirsutum}, partial
(37%)
Length = 457
Score = 154 bits (389), Expect = 4e-38
Identities = 71/121 (58%), Positives = 89/121 (72%), Gaps = 6/121 (4%)
Frame = +1
Query: 12 AWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGHISTDEE 71
AWS ED+IL YV + GEG W+ + + AGLKRCG+SC+QRWLNYLKP I RG+IS DE
Sbjct: 34 AWSSHEDEILLNYVQVRGEGNWRNLPKRAGLKRCGESCKQRWLNYLKPTISRGNISLDEH 213
Query: 72 DMIIRLHRLLGN------RWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTSSSSLPSP 125
++IIRLH+LLGN RWS+IA RLPGRT+ EIKNYWNT L K+ ++ + + PS
Sbjct: 214 ELIIRLHKLLGNSNYTCRRWSIIAGRLPGRTEEEIKNYWNTYLRKEAEENQNNKNEFPST 393
Query: 126 S 126
S
Sbjct: 394 S 396
>TC218769 UP|Q9XIU8 (Q9XIU8) GmMYB29A2 protein, complete
Length = 828
Score = 154 bits (389), Expect = 4e-38
Identities = 72/132 (54%), Positives = 93/132 (69%), Gaps = 4/132 (3%)
Frame = +1
Query: 1 MVRSP----KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNY 56
MVR+P + KG W+ EED IL+ Y+ HG G W+ + + AGL RCGKSCR RW+NY
Sbjct: 1 MVRAPCCEKMGLKKGPWAPEEDQILTSYIDKHGHGNWRALPKQAGLLRCGKSCRLRWINY 180
Query: 57 LKPGIKRGHISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQP 116
L+P IKRG+ + +EE+ II+LH +LGNRWS IA +LPGRTDNEIKN W+TNL K+L K
Sbjct: 181 LRPDIKRGNFTIEEEETIIKLHDMLGNRWSAIAAKLPGRTDNEIKNVWHTNLKKRLLKSD 360
Query: 117 TSSSSLPSPSSV 128
S S S ++
Sbjct: 361 QSKSKPSSKRAI 396
>TC210216 homologue to UP|Q70KC5 (Q70KC5) MYB transcription factor, partial
(33%)
Length = 1252
Score = 152 bits (385), Expect = 1e-37
Identities = 70/115 (60%), Positives = 89/115 (76%), Gaps = 1/115 (0%)
Frame = +3
Query: 14 SREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGHISTDEEDM 73
S EEDD L Y++ HG+G W VA+NAGL+RCGKSCR RW+NYL+P +KRG S EE++
Sbjct: 9 SPEEDDKLMNYMLNHGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEEL 188
Query: 74 IIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQK-QPTSSSSLPSPSS 127
II H LLGNRWS IA RLPGRTDNEIKN+WN+ + K+L+ T++++ PSPSS
Sbjct: 189 IIHFHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLRNMSSTTTTTSPSPSS 353
>TC229681 UP|Q9S7E3 (Q9S7E3) GmMYB29A1 protein, complete
Length = 795
Score = 152 bits (383), Expect = 2e-37
Identities = 69/122 (56%), Positives = 90/122 (73%), Gaps = 4/122 (3%)
Frame = +1
Query: 1 MVRSP----KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNY 56
MVR+P + KG W+ EED IL Y+ HG G W+ + + AGL RCGKSCR RW+NY
Sbjct: 1 MVRAPCCEKMGLKKGPWTPEEDQILMSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINY 180
Query: 57 LKPGIKRGHISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQP 116
L+P IKRG+ S++EE++II++H LLGNRWS IA +LPGRTDNEIKN W+T+L K+L
Sbjct: 181 LRPDIKRGNFSSEEEEIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLMNSD 360
Query: 117 TS 118
T+
Sbjct: 361 TN 366
>TC211951 similar to GB|AAS10022.1|41619094|AY519552 MYB transcription factor
{Arabidopsis thaliana;} , partial (38%)
Length = 776
Score = 150 bits (378), Expect = 7e-37
Identities = 83/204 (40%), Positives = 114/204 (55%), Gaps = 17/204 (8%)
Frame = +2
Query: 6 KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGH 65
+++ KG WS EED+ L Y+ HG G W V + AGL+RCGKSCR RW+NYL+P +KRG
Sbjct: 119 QKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGA 298
Query: 66 ISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQK--------QPT 117
S EE+ II LH +LGNRWS IA +LPGRTDNEIKN WN+ L KKL++ QP
Sbjct: 299 FSQQEENSIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHQPL 478
Query: 118 SSSSLPSPSSVSLRHNHGKCGH-----VAPEAPKPRRLKAVHQYKI----LEKNSGSEYD 168
S ++ ++ K + V P PKP A + LE +S S+
Sbjct: 479 SEIENDKDKPLTADKSNQKASNEVISLVEPPKPKPIATTATTSMPMDRHPLEVSSTSKIS 658
Query: 169 QGSDETSIADFFIDFDHQDQLMVG 192
G++ +++ F D + +G
Sbjct: 659 SGNNNSTLDRFDSSITSSDMMGMG 730
>TC229682 UP|Q9XIU9 (Q9XIU9) GmMYB29A2 protein, complete
Length = 1249
Score = 150 bits (378), Expect = 7e-37
Identities = 68/116 (58%), Positives = 88/116 (75%), Gaps = 4/116 (3%)
Frame = +3
Query: 1 MVRSP----KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNY 56
MVR+P + KG W+ EED IL Y+ HG G W+ + + AGL RCGKSCR RW+NY
Sbjct: 84 MVRAPCCEKMGLKKGPWTPEEDQILMSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINY 263
Query: 57 LKPGIKRGHISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKL 112
L+P IKRG+ S++EE++II++H LLGNRWS IA +LPGRTDNEIKN W+T+L K+L
Sbjct: 264 LRPDIKRGNFSSEEEEIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRL 431
>TC216477 homologue to UP|P93474 (P93474) Myb26, partial (67%)
Length = 1001
Score = 150 bits (378), Expect = 7e-37
Identities = 85/192 (44%), Positives = 108/192 (55%)
Frame = +2
Query: 7 EVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGHI 66
EV KG W+ EED IL Y+ HGEG W +A+ AGLKR GKSCR RWLNYL+P ++RG+I
Sbjct: 65 EVRKGPWTMEEDLILITYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNI 244
Query: 67 STDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTSSSSLPSPS 126
+ +E+ +I+ LH GNRWS IAK LPGRTDNEIKNYW T + K L KQ +SS S +
Sbjct: 245 TPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHL-KQASSSFQQQSSN 421
Query: 127 SVSLRHNHGKCGHVAPEAPKPRRLKAVHQYKILEKNSGSEYDQGSDETSIADFFIDFDHQ 186
S + H V+ A + +E S Y D SI F H
Sbjct: 422 SEIIYHPQACTSQVSTMA------------QPIETYSPPSYQGMLDPFSIQ--FPTNPHH 559
Query: 187 DQLMVGDDESNS 198
DD++N+
Sbjct: 560 SSCCTNDDDNNN 595
>TC211840 homologue to UP|Q8LBF0 (Q8LBF0) Myb-related protein M4, partial
(38%)
Length = 516
Score = 149 bits (375), Expect = 2e-36
Identities = 65/103 (63%), Positives = 80/103 (77%)
Frame = +2
Query: 10 KGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGHISTD 69
KG W+ EED L Y+ HG G W+ + +NAGL+RCGKSCR RW NYL+P IKRG S +
Sbjct: 2 KGPWTTEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFE 181
Query: 70 EEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKL 112
EE+ II+LH +LGN+WS IA RLPGRTDNEIKNYWNT++ K+L
Sbjct: 182 EEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRL 310
>TC229093 homologue to PIR|T51621|T51621 myb-like protein [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(44%)
Length = 964
Score = 146 bits (369), Expect = 8e-36
Identities = 75/143 (52%), Positives = 86/143 (59%)
Frame = +3
Query: 6 KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGH 65
K V KG W+ EED IL Y+ HG G W+ V N GL RC KSCR RW NYL+PGIKRG+
Sbjct: 177 KGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPANTGLSRCSKSCRLRWTNYLRPGIKRGN 356
Query: 66 ISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTSSSSLPSP 125
+ EE MII L LLGNRW+ IA LP RTDN+IKNYWNT L KKL K+ + S S
Sbjct: 357 FTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLNKKLEAGSDQGS- 533
Query: 126 SSVSLRHNHGKCGHVAPEAPKPR 148
L H G + P R
Sbjct: 534 ---LLGGGHNNIGFSSVSQPMSR 593
>TC232753 GmMYB10
Length = 423
Score = 145 bits (367), Expect = 1e-35
Identities = 67/116 (57%), Positives = 84/116 (71%)
Frame = +2
Query: 6 KEVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGH 65
+++ KG WS EED+ L Y+ G G W V + AGL+RCGKSCR RW+NYL+P +KRG
Sbjct: 59 QKLRKGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGM 238
Query: 66 ISTDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTSSSS 121
S EED+II LH +LGNRW+ IA +LPGRTDNEIKN+WN+ L KKL KQ S+
Sbjct: 239 FSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLLKQGIDPST 406
>TC216478 similar to UP|P93474 (P93474) Myb26, partial (83%)
Length = 925
Score = 145 bits (367), Expect = 1e-35
Identities = 65/123 (52%), Positives = 86/123 (69%)
Frame = +1
Query: 7 EVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGHI 66
EV KG W+ EED IL Y+ HGEG W +A+ AGLKR GKSCR RWLNYL+P ++RG+I
Sbjct: 97 EVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNI 276
Query: 67 STDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTSSSSLPSPS 126
+ +E+ +I+ LH GNRWS IAK LPGRTDNEIKNYW T + K +++ + + S
Sbjct: 277 TPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENFQQQISNNS 456
Query: 127 SVS 129
++
Sbjct: 457 EIN 465
>TC218951 homologue to UP|P93474 (P93474) Myb26, partial (77%)
Length = 866
Score = 145 bits (366), Expect = 2e-35
Identities = 65/112 (58%), Positives = 83/112 (74%)
Frame = +3
Query: 7 EVNKGAWSREEDDILSKYVVIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGHI 66
EV KG W+ EED IL Y+ HGEG W +A+ +GLKR GKSCR RWLNYL+P ++RG+I
Sbjct: 45 EVRKGPWTMEEDLILINYIANHGEGVWNSLAKASGLKRTGKSCRLRWLNYLRPDVRRGNI 224
Query: 67 STDEEDMIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTNLSKKLQKQPTS 118
+ +E+ +II LH GNRWS IAK LPGRTDNEIKN+W T + K +++ TS
Sbjct: 225 TPEEQLLIIELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQAETS 380
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.131 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,818,045
Number of Sequences: 63676
Number of extensions: 204239
Number of successful extensions: 1433
Number of sequences better than 10.0: 177
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of query: 254
length of database: 12,639,632
effective HSP length: 95
effective length of query: 159
effective length of database: 6,590,412
effective search space: 1047875508
effective search space used: 1047875508
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144645.5