Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144618.9 + phase: 0 
         (313 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC231086 weakly similar to GB|AAM78072.1|21928087|AY125562 AT3g0...   177  7e-45
CO980430                                                              116  1e-26
BI316319 similar to GP|19699077|gb AT5g28150/T24G3_80 {Arabidops...   114  4e-26
TC223925 similar to GB|AAM78072.1|21928087|AY125562 AT3g04860/T9...   102  3e-22
TC209628                                                              101  5e-22
TC208063 similar to UP|Q9SJQ8 (Q9SJQ8) Expressed protein, partia...    99  2e-21
TC210012                                                               99  3e-21
TC220909 similar to UP|Q8RX84 (Q8RX84) AT5g28150/T24G3_80, parti...    90  1e-18
BQ452545                                                               79  2e-15
BU549340                                                               72  3e-13
TC210013 homologue to UP|O36954 (O36954) MA-p17 (Fragment), part...    67  8e-12
BE822210                                                               66  2e-11
AW666232                                                               64  7e-11
AW620775                                                               60  2e-09
TC221990 similar to GB|AAM51579.1|21436003|AY116945 AT5g11000/T3...    49  4e-06
BI969676 similar to PIR|F95341|F9534 protein [imported] - Sinorh...    47  9e-06
BE804123                                                               40  0.001
CO984543                                                               38  0.005
TC208064                                                               35  0.057
BE805893                                                               34  0.098

>TC231086 weakly similar to GB|AAM78072.1|21928087|AY125562
           AT3g04860/T9J14_19 {Arabidopsis thaliana;} , partial
           (72%)
          Length = 822

 Score =  177 bits (448), Expect = 7e-45
 Identities = 93/238 (39%), Positives = 145/238 (60%), Gaps = 2/238 (0%)
 Frame = +2

Query: 54  ISVLWCKNLINHTLNLKVDSARGEQFHQNCKIEVKPWCFWNRKGYRSFDVDGNQIDVYWD 113
           I+V W K L+   L++ +D       H  CK+E+KPW F  RKG ++ +V   ++D++WD
Sbjct: 32  ITVWWTKTLMGQGLSVGIDDLGN---HCLCKVEIKPWLFSKRKGSKNLEVQSGKVDIFWD 202

Query: 114 LRSAKFAGNCPEPCSDYYVMLVSDEEVVLLLGDYKKKAYKRMKMRQALVE--ATLLVKRE 171
           L  AKF G+ PEP   +Y+ +V ++E+VLLLGD KK+A K+++   A     A  + KRE
Sbjct: 203 LSCAKF-GSGPEPLEGFYLAVVFNKEMVLLLGDLKKEACKKIESDCAFSHCGAVCIAKRE 379

Query: 172 NVFAKKSFSTKAKFDEKRKESDIVVESSTAGNKDPEMWISIDGIVLIHIKNLQWKFRGNQ 231
           ++  KK +  KA+F +K +  D+ +E  T G  DP + I ID   ++ +K L+WKFRGN 
Sbjct: 380 HIIGKKFYGAKAQFCDKGQVHDVTIECDTLGPSDPSLVIRIDSKTVMQVKRLKWKFRGNH 559

Query: 232 TVMVNKQPVHVFWDVYDWLFSVSGSGPGLFIFKPGPTEVESDKEEKGLEGESDDGSAT 289
           T++V+  PV VFWDV+ WLF  +  G  +F+F+   T + +DK  +G +  SD  + T
Sbjct: 560 TILVDGVPVEVFWDVHSWLFG-NAMGNAVFMFQ---TCISNDKMWEG-QSVSDPSALT 718


>CO980430 
          Length = 805

 Score =  116 bits (290), Expect = 1e-26
 Identities = 69/227 (30%), Positives = 116/227 (50%), Gaps = 16/227 (7%)
 Frame = -1

Query: 54  ISVLWCKNLINHTLNLKVDSARGEQFHQNCKIEVKPWCFWNRKGYR---SFDVDGNQIDV 110
           ++V WC++  N  L +  +      F  N         F  +KG +   S D   +++++
Sbjct: 763 VTVTWCRSHSNQGLTITFNDEDPPLFRLNTNSRF----FRKKKGSKILESSDSSSSKVEI 596

Query: 111 YWDLRSAKFAGNCPEPCSDYYVMLVSDEEVVLLLGDY-------KKKAYKRMKMRQA-LV 162
            WDL SAK+    PEP   ++V+++ D E+ L+LGD        K++ +K        L 
Sbjct: 595 LWDLSSAKYESG-PEPVQGFHVVIIIDSEIGLVLGDTAAEEIVSKRQNFKSNNNNNTPLA 419

Query: 163 EATLLVKRENVFAKKSFSTKAKFDEKRKESDIVVESSTAGN-----KDPEMWISIDGIVL 217
           + +LL +RE+      ++TKA+F +     D+++  S         K P + + ID   +
Sbjct: 418 KVSLLSRREHCSGNTLYTTKAQFCDTGTWHDVMIRCSVENENEGLFKSPVLCVCIDKKTV 239

Query: 218 IHIKNLQWKFRGNQTVMVNKQPVHVFWDVYDWLFSVSGSGPGLFIFK 264
           I +K LQW FRGNQT+ V+   V + WDV+DW F+ S SG  +F+F+
Sbjct: 238 IRVKRLQWNFRGNQTIFVDGLLVDLLWDVHDWFFNPSSSGYAVFMFR 98


>BI316319 similar to GP|19699077|gb AT5g28150/T24G3_80 {Arabidopsis
           thaliana}, partial (43%)
          Length = 394

 Score =  114 bits (286), Expect = 4e-26
 Identities = 58/134 (43%), Positives = 84/134 (62%)
 Frame = +2

Query: 52  RNISVLWCKNLINHTLNLKVDSARGEQFHQNCKIEVKPWCFWNRKGYRSFDVDGNQIDVY 111
           R I+V W KNL+   L + +D +  +     CK+++KPW F  R+G +S +V   ++DVY
Sbjct: 5   RLITVTWSKNLMGQGLGVGIDDSSSQSL---CKVDIKPWGFSKRRGCKSLEVHSCKVDVY 175

Query: 112 WDLRSAKFAGNCPEPCSDYYVMLVSDEEVVLLLGDYKKKAYKRMKMRQALVEATLLVKRE 171
           WDL SAKF G+ PEP   +YV  V D ++VLLLGD +K+A+K+         A L+ K+E
Sbjct: 176 WDLSSAKF-GSGPEPLGGFYVGAVVDGQMVLLLGDLRKEAFKKTNANPLPHNAALVAKKE 352

Query: 172 NVFAKKSFSTKAKF 185
           +VF KK + TKA F
Sbjct: 353 HVFGKKLYGTKAVF 394


>TC223925 similar to GB|AAM78072.1|21928087|AY125562 AT3g04860/T9J14_19
           {Arabidopsis thaliana;} , partial (43%)
          Length = 415

 Score =  102 bits (253), Expect = 3e-22
 Identities = 51/121 (42%), Positives = 78/121 (64%)
 Frame = +2

Query: 32  TKTAQSTVTCLYQTSIGGQWRNISVLWCKNLINHTLNLKVDSARGEQFHQNCKIEVKPWC 91
           +KTAQ+ V C+YQ  I G+   I++ W K+L+   L++ +D     Q    CK+++KPW 
Sbjct: 62  SKTAQNLVICVYQCRIRGKCCFITITWTKSLMGQGLSVGIDD*SSNQCL--CKVDIKPWV 235

Query: 92  FWNRKGYRSFDVDGNQIDVYWDLRSAKFAGNCPEPCSDYYVMLVSDEEVVLLLGDYKKKA 151
           F  R+GY+S +    +IDVYWDL +A+  G  PEP   +YV +V D ++VLLLGD +K+A
Sbjct: 236 FSKRRGYKSLEAYSCKIDVYWDLSNARL-GVGPEPLEGFYVGVVVDRQMVLLLGDLRKEA 412

Query: 152 Y 152
           +
Sbjct: 413 F 415


>TC209628 
          Length = 342

 Score =  101 bits (251), Expect = 5e-22
 Identities = 52/109 (47%), Positives = 74/109 (67%), Gaps = 6/109 (5%)
 Frame = +2

Query: 161 LVEATLLVKRENVFAKKSFSTKAKFDEKRKESDIVVE---SSTAGNKD---PEMWISIDG 214
           L++  L+ K+E++F K+ FST+AKF EK +  +I +E   ++  G+ D   PEM I +DG
Sbjct: 2   LIDPILVSKKEHIFGKRKFSTRAKFHEKGRCHEISIECKSNNIGGDGDKIQPEMEIKLDG 181

Query: 215 IVLIHIKNLQWKFRGNQTVMVNKQPVHVFWDVYDWLFSVSGSGPGLFIF 263
            V+IH+K LQWKFRGN+++ +NK    V+WDVY WLFS  G    LFIF
Sbjct: 182 HVVIHVKRLQWKFRGNESIHLNKMRSEVYWDVYXWLFS-PGLKHALFIF 325


>TC208063 similar to UP|Q9SJQ8 (Q9SJQ8) Expressed protein, partial (20%)
          Length = 1403

 Score = 99.0 bits (245), Expect = 2e-21
 Identities = 64/240 (26%), Positives = 113/240 (46%), Gaps = 9/240 (3%)
 Frame = +2

Query: 34  TAQSTVTCLYQTSIGGQWRN--ISVLWCKNLINHTLNLKVDSARGEQFHQNCKIEVKPWC 91
           + + +VTC+Y+ ++    +   I++ W K L+     + +  A  E      K   +   
Sbjct: 287 STRDSVTCMYKLTLIETQKQLFITLTWSKKLLGQGFTITI--ANSEHSLSPSKSNARQ-- 454

Query: 92  FWNRKGYRSFDVDGNQIDVYWDLRSAKFAGNCPEPCSDYYVMLVSDEEVVLLLGDYKKKA 151
               KG  +      ++ V WDL  AK+    PEP   +YV+++ D E+ L LGD     
Sbjct: 455 LRKIKGNETLQSQNFKVQVLWDLSDAKYEEG-PEPVGAFYVVVLVDSELGLRLGDKNSLI 631

Query: 152 YKRMKMRQALVEATLLVKRENVFAKKS-FSTKAKFDEKRKESDIVVESSTA------GNK 204
            + +    A      LV R   F+  + ++TKAKF E     +I+++            K
Sbjct: 632 EELLSNLDAKEANFSLVSRSETFSGTAVYATKAKFSETGISHEILIKCGAEVVEGGEAKK 811

Query: 205 DPEMWISIDGIVLIHIKNLQWKFRGNQTVMVNKQPVHVFWDVYDWLFSVSGSGPGLFIFK 264
              + + +D   +  +K L+W FRGNQT+ V+   V + WDV+DWLF+ + +   +F+F+
Sbjct: 812 GHVLSVCVDKKTIFQVKRLRWNFRGNQTIFVDGLVVDMMWDVHDWLFNSNSASSAVFMFR 991


>TC210012 
          Length = 952

 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 61/240 (25%), Positives = 117/240 (48%), Gaps = 5/240 (2%)
 Frame = +2

Query: 32  TKTAQSTVTCLYQTSIGGQWRNISVLWCKNLINHTLNLKVDSARGEQFHQNCKIEVKPWC 91
           ++  Q+ VTC Y T +      +++ W + L +H+L +         F     +    + 
Sbjct: 59  SQVPQNVVTCTYLTQLCNSPTYLTLSWSRTLFSHSLTISATDI----FSITISLNSSTFF 226

Query: 92  FWNRKGYRSFDVDGNQIDVYWDLRSAKFAGNCPEPCSDYYVMLVSDEEVVLLLGDYKKKA 151
           F  R G +S  ++  +I ++W+   A+F  N  EP S +Y+ +  + ++   LGD  +  
Sbjct: 227 FRTRHGSKS--INNRKIKLHWNFTRAEFIQNSAEPESRFYLAISHNGKLQFFLGDLVRDL 400

Query: 152 YKRMKMRQA----LVEATLLVKRENVFAKKSFSTKAKFDEKRKESDIVVESSTAGNKDPE 207
            +R K        +V+  L+ +RE+VF ++ + ++A F      S  V+E    G     
Sbjct: 401 TRRHKKLDVKANNVVDPVLVSRREHVFGRRCYVSRAVF----MGSKHVIEIECGGGV--- 559

Query: 208 MWISIDGIVLIHIKNLQWKFRGNQTVMVNKQPVHVFWDVYDWLFS-VSGSGPGLFIFKPG 266
           + + +DG   + +K L WKFRG + + ++   V  +WDV  W+ +  S +G G+F+F+ G
Sbjct: 560 LGVKVDGETRLVVKRLAWKFRGYEKIFIDGVEVEFYWDVLSWVVNRDSNNGHGVFVFQVG 739


>TC220909 similar to UP|Q8RX84 (Q8RX84) AT5g28150/T24G3_80, partial (22%)
          Length = 782

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 43/99 (43%), Positives = 64/99 (64%)
 Frame = +2

Query: 166 LLVKRENVFAKKSFSTKAKFDEKRKESDIVVESSTAGNKDPEMWISIDGIVLIHIKNLQW 225
           L+ K+++VF K+ F  KA F +  +  D+V+E  T G  DP + I ID   ++ +K L+W
Sbjct: 26  LVPKKKHVFGKEMFGNKAVFCDNGQIHDLVIECDTLGVSDPCLIIRIDSKTVMQVKRLKW 205

Query: 226 KFRGNQTVMVNKQPVHVFWDVYDWLFSVSGSGPGLFIFK 264
           KFRGN T++V+   V VFWDVY+WLF  S  G  +F+F+
Sbjct: 206 KFRGNHTILVDGLAVEVFWDVYNWLFGTS-LGNAVFMFR 319


>BQ452545 
          Length = 460

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
 Frame = +3

Query: 127 CSDYYVMLVSDEEVVLLLGDY--------KKKAYKRMKMRQALVEATLLVKRENVFAKKS 178
           CS ++V+++ D E+ L+LGD         K++ +K  K    L + +LL +RE+      
Sbjct: 51  CSGFHVLIIIDSEIGLVLGDTAAAEETVSKRQNFKNNK-NTPLAKVSLLSRREHCSGNTL 227

Query: 179 FSTKAKFDEKRKESDIVVESSTAGN------KDPEMWISIDGIVLIHIKNLQWKFRGNQT 232
           ++TKA+F +     D+++  S          K P + + ID   +I +K L W FRGNQT
Sbjct: 228 YTTKAQFCDTGTWHDVMIRCSVEKENEGLLFKSPVLCVCIDKKTVIRVKRLHWNFRGNQT 407

Query: 233 VMVNKQPVHVFWDVYDW 249
           + V+   V + WDV+DW
Sbjct: 408 IFVDGLLVDLLWDVHDW 458


>BU549340 
          Length = 628

 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 33/72 (45%), Positives = 47/72 (64%)
 Frame = -2

Query: 193 DIVVESSTAGNKDPEMWISIDGIVLIHIKNLQWKFRGNQTVMVNKQPVHVFWDVYDWLFS 252
           D V+E  TA   DP + I ID   ++ +K L+WKFRGN T++V+   V VFWDV++WLF 
Sbjct: 609 DXVIECGTASVGDPSLVIRIDSKTVMQVKRLRWKFRGNHTILVDGLAVEVFWDVHNWLFG 430

Query: 253 VSGSGPGLFIFK 264
            S  G  +F+F+
Sbjct: 429 TS-LGNAVFMFR 397


>TC210013 homologue to UP|O36954 (O36954) MA-p17 (Fragment), partial (11%)
          Length = 583

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 4/178 (2%)
 Frame = +3

Query: 12  FSKQNLASLMSQRITEEPLPTKTAQSTVTCLYQTSIGGQWRNISVLWCKNLINHTLNLKV 71
           FS+ N  S  S   +   +P    Q+ +TC+Y+T +      +++ W K L +H+L +  
Sbjct: 66  FSQPNTPSSSSSSSSSSQVP----QNLITCIYKTQLCNSPTYLTLSWSKTLFSHSLTISA 233

Query: 72  DSARGEQFHQNCKIEVKPWCFWNRKGYRSFDVDGNQIDVYWDLRSAKFAGNCPEPCSDYY 131
                  F     +    + F+ R+   S  ++  +I ++W+   A+F  N  EP S +Y
Sbjct: 234 TDI----FSITISLNSSTFSFFRRR-QGSKSINKRKIKLHWNFTRAEFIQNSAEPESRFY 398

Query: 132 VMLVSDEEVVLLLGDYKKKAYKRMKM----RQALVEATLLVKRENVFAKKSFSTKAKF 185
           + +  ++++   LGD  +   +R K        +V+  LL +RE+VF ++ + ++A F
Sbjct: 399 LAISHNDKLQFFLGDLLRDLNRRNKRVDVEANNVVDPVLLSRREHVFGRRCYVSRAVF 572


>BE822210 
          Length = 619

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
 Frame = -2

Query: 167 LVKRENVFAKKS-FSTKAKFDEKRKESDIVV----ESSTAGNKDPEMWISIDGIVLIHIK 221
           +V R   F+  + ++TKAK  +     DI++    E+     K   + + +D   +  +K
Sbjct: 582 MVSRSETFSGTAVYATKAKXXQTGSSHDILIRCGAEAERGEPKGHVLSVCVDKKTMFQVK 403

Query: 222 NLQWKFRGNQTVMVNKQPVHVFWDVYDWLFSVSGSGPGLFIFK 264
            L+W FRGNQT+ V+   V + WDV+DWLF+ + +   +F+F+
Sbjct: 402 RLRWNFRGNQTIFVDGLVVDMMWDVHDWLFNSNSASSAVFMFR 274



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 93  WNRKGYRSFDVDGNQIDVYWDLRSAKFAGN 122
           WN +G ++  VDG  +D+ WD+    F  N
Sbjct: 393 WNFRGNQTIFVDGLVVDMMWDVHDWLFNSN 304


>AW666232 
          Length = 417

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 40/144 (27%), Positives = 70/144 (47%), Gaps = 12/144 (8%)
 Frame = +2

Query: 42  LYQTSIGGQWRNISVLWCKNLINHTLNLKVDSARGE------------QFHQNCKIEVKP 89
           +Y T  G     +S+ W ++++  +L++++   +               FH +    ++P
Sbjct: 20  IYHTDTGP----VSLTWSRSIVGRSLHIQLHQNQNPLDSPPYPNPTTLSFHHH----IRP 175

Query: 90  WCFWNRKGYRSFDVDGNQIDVYWDLRSAKFAGNCPEPCSDYYVMLVSDEEVVLLLGDYKK 149
           + FW + G +    D     ++W+L  AKF G  PEP S +YV LV    + LL+GD  K
Sbjct: 176 FLFWKKHGSKKLAPD---TFLFWNLSRAKF-GAAPEPLSGFYVALVVHNHMTLLIGDSTK 343

Query: 150 KAYKRMKMRQALVEATLLVKRENV 173
            A+ + K R       LL+K+E+V
Sbjct: 344 DAFSKSKARHPNTPQLLLLKKEHV 415


>AW620775 
          Length = 431

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 26/62 (41%), Positives = 39/62 (61%)
 Frame = +2

Query: 32  TKTAQSTVTCLYQTSIGGQWRNISVLWCKNLINHTLNLKVDSARGEQFHQNCKIEVKPWC 91
           T++ QS    +Y+T I  Q R I++ WCKN+I H L++ V+   G+     CK+E+KPW 
Sbjct: 248 TRSGQSVHMSVYRTKIADQCRLITITWCKNMILHGLSVSVEGPEGKA-QYCCKVELKPWY 424

Query: 92  FW 93
           FW
Sbjct: 425 FW 430


>TC221990 similar to GB|AAM51579.1|21436003|AY116945 AT5g11000/T30N20_270
           {Arabidopsis thaliana;} , partial (11%)
          Length = 619

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 18/41 (43%), Positives = 29/41 (69%)
 Frame = +3

Query: 211 SIDGIVLIHIKNLQWKFRGNQTVMVNKQPVHVFWDVYDWLF 251
           S+DG  ++ +  L+WKFRG++ V ++   V + WDV+DWLF
Sbjct: 252 SVDGEKVLEVARLKWKFRGSERVEIDGVHVQISWDVHDWLF 374


>BI969676 similar to PIR|F95341|F9534 protein [imported] - Sinorhizobium
           meliloti (strain 1021) magaplasmid pSymA, partial (18%)
          Length = 728

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = -3

Query: 223 LQWKFRGNQTVMVNKQPVHVFWDVYDWLFSVSGSGP----GLFIFKPGPTEVESDKEEKG 278
           L+WKFRGN  V V+   V + WD+Y+WLF  + +       +F+FK    EVE+  +   
Sbjct: 726 LKWKFRGNXXVQVDGVXVQISWDLYNWLFDKNNNSAADAHAIFMFKFEEDEVEAVGDRNN 547

Query: 279 LEG 281
           + G
Sbjct: 546 VVG 538


>BE804123 
          Length = 406

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 22/70 (31%), Positives = 35/70 (49%)
 Frame = +1

Query: 85  IEVKPWCFWNRKGYRSFDVDGNQIDVYWDLRSAKFAGNCPEPCSDYYVMLVSDEEVVLLL 144
           + VKPW    +KG +      +     W+L SA+F    PEP S +Y+ +  +  + LL+
Sbjct: 10  LHVKPW---RKKGSKKLS---HNTVFLWNLSSARFESGRPEPRSRFYLAIEVEHSLHLLV 171

Query: 145 GDYKKKAYKR 154
           GDY  +   R
Sbjct: 172 GDYPPRVRPR 201


>CO984543 
          Length = 674

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = -3

Query: 237 KQPVHVFWDVYDWLFSVSGSGPGLFIFKP 265
           K  V V+WDV+DWLFS  G    LFIFKP
Sbjct: 672 KMRVEVYWDVHDWLFS-PGLKHALFIFKP 589


>TC208064 
          Length = 539

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = +1

Query: 124 PEPCSDYYVMLVSDEEVVLLLGDYKKKAYKRMKMRQALVEATL-LVKRENVFAKKS-FST 181
           PEP   +YV ++ D E+ L LGD K  + + +       EAT  +V R   F+  + ++T
Sbjct: 325 PEPVGGFYVDVLVDSELGLRLGD-KNSSMEELLPNFDAKEATFSMVSRSETFSGTAVYAT 501

Query: 182 KAKFDEKRKESD 193
           KAKF +     D
Sbjct: 502 KAKFSQTGSSHD 537


>BE805893 
          Length = 414

 Score = 33.9 bits (76), Expect = 0.098
 Identities = 14/32 (43%), Positives = 21/32 (64%)
 Frame = +3

Query: 32  TKTAQSTVTCLYQTSIGGQWRNISVLWCKNLI 63
           T++ QS    +Y+T I  Q R I++ WCKN+I
Sbjct: 318 TRSGQSVHMSVYRTKIADQCRLITMTWCKNMI 413


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.317    0.133    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,215,137
Number of Sequences: 63676
Number of extensions: 226250
Number of successful extensions: 1203
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of query: 313
length of database: 12,639,632
effective HSP length: 97
effective length of query: 216
effective length of database: 6,463,060
effective search space: 1396020960
effective search space used: 1396020960
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)


Medicago: description of AC144618.9