BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144541.17 - phase: 0 /pseudo
(375 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BU763861 195 5e-56
TC219384 94 1e-19
TC211100 similar to GB|AAM91352.1|22137014|AY133522 At5g23340/MK... 87 2e-17
TC215544 78 6e-15
TC209901 weakly similar to UP|Q6RZU4 (Q6RZU4) F-box-like protein... 77 1e-14
TC229610 weakly similar to UP|O22512 (O22512) Grr1, partial (52%) 77 1e-14
TC209931 UP|PTCA_HUMAN (Q14761) Protein tyrosine phosphatase rec... 75 4e-14
TC215543 similar to UP|Q8LDN3 (Q8LDN3) F-box protein AtFBL5, par... 74 1e-13
TC226686 homologue to UP|O22512 (O22512) Grr1, complete 70 1e-12
TC216301 similar to UP|O22512 (O22512) Grr1, partial (38%) 69 3e-12
BI427115 similar to GP|13605655|gb AT4g15470/dl3775w {Arabidopsi... 69 4e-12
TC215542 65 5e-11
TC233063 60 2e-09
TC221380 59 3e-09
TC218546 similar to GB|AAM91352.1|22137014|AY133522 At5g23340/MK... 59 5e-09
AI900426 58 6e-09
BM887272 57 1e-08
BE806321 similar to GP|2407790|gb| grr1 {Glycine max}, partial (... 45 5e-08
TC214530 52 4e-07
BM308976 weakly similar to GP|13605809|gb At2g17020 {Arabidopsis... 52 4e-07
>BU763861
Length = 463
Score = 195 bits (495), Expect(2) = 5e-56
Identities = 91/108 (84%), Positives = 103/108 (95%)
Frame = +3
Query: 104 LDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSG 163
LDLTCCRF++DAAISTIA+SCP+L CLKLESCDMVTE LYQ+G +C +L+ELDLTDCSG
Sbjct: 18 LDLTCCRFISDAAISTIADSCPDLVCLKLESCDMVTENCLYQLGLNCSLLKELDLTDCSG 197
Query: 164 VNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYR 211
V+DIAL+YLSRCS+LVRLKLGLCTNISDIGLAHIACNCPK+TELDLYR
Sbjct: 198 VDDIALRYLSRCSELVRLKLGLCTNISDIGLAHIACNCPKMTELDLYR 341
Score = 78.2 bits (191), Expect = 6e-15
Identities = 52/140 (37%), Positives = 70/140 (49%), Gaps = 2/140 (1%)
Frame = +3
Query: 61 VSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQV-VGCCNLTTLDLTCCRFVTDAAIST 119
+SD + I +C LV L L C VT + Q+ + C L LDLT C V D A+
Sbjct: 42 ISDAAISTIADSCPDLVCLKLESCDMVTENCLYQLGLNCSLLKELDLTDCSGVDDIALRY 221
Query: 120 IANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYL-SRCSKL 178
++ C L LKL C +++IGL I +C + ELDL C + D L L S C L
Sbjct: 222 LSR-CSELVRLKLGLCTNISDIGLAHIACNCPKMTELDLYRCVRIGDDGLAALTSGCKGL 398
Query: 179 VRLKLGLCTNISDIGLAHIA 198
L L C I+D GL +I+
Sbjct: 399 TNLNLSYCNRITDRGLEYIS 458
Score = 42.4 bits (98), Expect = 3e-04
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 61 VSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVV-GCCNLTTLDLTCCRFVTDAAIST 119
+SD L I NC + EL L +C+ + + G+ + GC LT L+L+ C +TD +
Sbjct: 273 ISDIGLAHIACNCPKMTELDLYRCVRIGDDGLAALTSGCKGLTNLNLSYCNRITDRGLEY 452
Query: 120 IAN 122
I++
Sbjct: 453 ISH 461
Score = 41.2 bits (95), Expect(2) = 5e-56
Identities = 23/38 (60%), Positives = 26/38 (67%)
Frame = +2
Query: 210 YRR*WASSTDNRMQQVGHAQPSILQ*DYRRRVEVYQQS 247
Y R*WAS T+ MQ V Q ILQ*+YR+RV VYQ S
Sbjct: 350 YWR*WASGTNEWMQGVDKPQLVILQ*NYRQRVGVYQPS 463
>TC219384
Length = 1313
Score = 93.6 bits (231), Expect = 1e-19
Identities = 46/96 (47%), Positives = 64/96 (65%)
Frame = +2
Query: 116 AISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRC 175
+I++I+NSC L LK+ESC +V IG C +EELDLTD + ++D L +S C
Sbjct: 8 SIASISNSCAGLTSLKMESCTLVPSEAFVLIGEKCHYIEELDLTD-NEIDDEGLMSISSC 184
Query: 176 SKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYR 211
S+L LK+G+C NI+D GL ++ +C KL ELDLYR
Sbjct: 185 SRLSSLKIGICLNITDRGLTYVGMHCSKLKELDLYR 292
Score = 83.6 bits (205), Expect = 1e-16
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Frame = +2
Query: 59 VRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVV-GCCNLTTLDLTCCRFVTDAAI 117
+ ++D L +G +C L EL L + GV ++GI + GC L ++ + C +TD A+
Sbjct: 218 LNITDRGLTYVGMHCSKLKELDLYRSTGVDDLGISAIARGCPGLEMINTSYCTSITDRAL 397
Query: 118 STIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVND---IALKYLSR 174
T++ C NL L++ C +VT IGL I +C L LD+ C ++D IAL + S+
Sbjct: 398 ITLSK-CSNLKTLEIRGCLLVTSIGLAAIAMNCRQLSRLDIKKCYNIDDSGMIALAHFSQ 574
Query: 175 CSKLVRLKLGLCTNISDIGLAHIAC 199
+ + L T++ + LA+I+C
Sbjct: 575 NLRQINLSYSSVTDVGLLSLANISC 649
Score = 82.8 bits (203), Expect = 2e-16
Identities = 53/171 (30%), Positives = 86/171 (49%)
Frame = +2
Query: 39 APLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVVGC 98
A ++N L L + V F+L IG C + EL L+ + + G+M + C
Sbjct: 14 ASISNSCAGLTSLKMESCTLVPSEAFVL--IGEKCHYIEELDLTDN-EIDDEGLMSISSC 184
Query: 99 CNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDL 158
L++L + C +TD ++ + C L L L V ++G+ I C LE ++
Sbjct: 185 SRLSSLKIGICLNITDRGLTYVGMHCSKLKELDLYRSTGVDDLGISAIARGCPGLEMINT 364
Query: 159 TDCSGVNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDL 209
+ C+ + D AL LS+CS L L++ C ++ IGLA IA NC +L+ LD+
Sbjct: 365 SYCTSITDRALITLSKCSNLKTLEIRGCLLVTSIGLAAIAMNCRQLSRLDI 517
Score = 40.0 bits (92), Expect = 0.002
Identities = 22/66 (33%), Positives = 35/66 (52%)
Frame = +2
Query: 310 LLMSNLKRLQDAKLVYLVNVTIQGLELALISCCGRIKKVKLQRSLEFSISSEILETIHER 369
L ++N+ LQ L++L + GL AL++C G + KVKL SL + ++ + R
Sbjct: 626 LSLANISCLQSFTLLHLQGLVPGGLAAALLAC-GGLTKVKLHLSLRSLLPELLIRHVEAR 802
Query: 370 GCKVRW 375
GC W
Sbjct: 803 GCVFEW 820
>TC211100 similar to GB|AAM91352.1|22137014|AY133522 At5g23340/MKD15_20
{Arabidopsis thaliana;} , partial (61%)
Length = 815
Score = 86.7 bits (213), Expect = 2e-17
Identities = 49/141 (34%), Positives = 74/141 (51%), Gaps = 3/141 (2%)
Frame = +1
Query: 61 VSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVV-GCCNLTTLDLTCCRFVTDAAIST 119
++D ++ IG + L L +S C +T+ G+ V GCC+L L + CRFVTD +
Sbjct: 391 ITDAGMKAIGEHLSLLQSLDVSYCRKLTDKGLSAVAKGCCDLRILHMAGCRFVTDGVLEA 570
Query: 120 IANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRC--SK 177
++ +C NL L L C +T+ GL + S C + LD+ CS V D+ + +SR S
Sbjct: 571 LSKNCGNLEELGLHGCTSITDNGLINLASGCRRIRFLDINKCSNVTDVGVSSVSRACSSS 750
Query: 178 LVRLKLGLCTNISDIGLAHIA 198
L LKL C I D + +A
Sbjct: 751 LKTLKLLDCYKIGDETILSLA 813
Score = 77.8 bits (190), Expect = 7e-15
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Frame = +1
Query: 61 VSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVVG--CCNLTTLDLTCCRFVTDAAIS 118
V+D L +I + L L L C G+T+ G M+ +G L +LD++ CR +TD +S
Sbjct: 313 VTDSDLAVIATAFTCLKILNLHNCKGITDAG-MKAIGEHLSLLQSLDVSYCRKLTDKGLS 489
Query: 119 TIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYL-SRCSK 177
+A C +L L + C VT+ L + +C LEEL L C+ + D L L S C +
Sbjct: 490 AVAKGCCDLRILHMAGCRFVTDGVLEALSKNCGNLEELGLHGCTSITDNGLINLASGCRR 669
Query: 178 LVRLKLGLCTNISDIGLAHIACNCPK----LTELDLYR 211
+ L + C+N++D+G++ ++ C L LD Y+
Sbjct: 670 IRFLDINKCSNVTDVGVSSVSRACSSSLKTLKLLDCYK 783
>TC215544
Length = 1377
Score = 78.2 bits (191), Expect = 6e-15
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 3/206 (1%)
Frame = +3
Query: 2 IDVSRCNCVSPSGLLSVISGHEGLEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGV-- 59
+D+S+ ++ L ++ G + L ++N C + L + L V+ + G
Sbjct: 513 LDLSKSFKLTDRSLYAIALGCQDLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVK 692
Query: 60 RVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVV-GCCNLTTLDLTCCRFVTDAAIS 118
SD LQ IG C L L L C V+++G+M + GC +L TLDL C +TD ++
Sbjct: 693 AASDTALQAIGHYCNQLQFLNLGWCENVSDVGVMSLAYGCRDLRTLDLCGCVLITDDSVI 872
Query: 119 TIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKL 178
+AN CP+L L L C +T+ +Y + S + G ND L
Sbjct: 873 ALANRCPHLRSLGLYFCQNITDRAMYSLAQSKVNNRMWGSMKGGGNND------DNDDGL 1034
Query: 179 VRLKLGLCTNISDIGLAHIACNCPKL 204
L + CT ++ + + +CP L
Sbjct: 1035RTLNISQCTALTPSAVQAVCDSCPSL 1112
Score = 63.9 bits (154), Expect = 1e-10
Identities = 51/167 (30%), Positives = 72/167 (42%), Gaps = 30/167 (17%)
Frame = +3
Query: 73 CKSLVELGLSKCI-GVTNMGIMQVVGCCNLTTLDLTCCR-FVTDAAISTIANSCPNLACL 130
C L L LS C + N+ + L TL L + + D A+ TIAN C +L L
Sbjct: 336 CLGLTRLSLSWCSKNMNNLVLSLSPKFTKLQTLILRQDKPQLEDNAVETIANFCHDLQIL 515
Query: 131 KLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSR---------------- 174
L +T+ LY I C L +L+++ CS +D AL YL+
Sbjct: 516 DLSKSFKLTDRSLYAIALGCQDLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVKA 695
Query: 175 ------------CSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDL 209
C++L L LG C N+SD+G+ +A C L LDL
Sbjct: 696 ASDTALQAIGHYCNQLQFLNLGWCENVSDVGVMSLAYGCRDLRTLDL 836
>TC209901 weakly similar to UP|Q6RZU4 (Q6RZU4) F-box-like protein, partial
(14%)
Length = 1246
Score = 77.4 bits (189), Expect = 1e-14
Identities = 52/183 (28%), Positives = 90/183 (48%), Gaps = 9/183 (4%)
Frame = +1
Query: 33 CLSELSAPLTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGI 92
C S PL++ K G + F L + + L L LS C +++ G+
Sbjct: 58 CSSTALRPLSSSTK-----------GFDIHTFHLHRLLRRFQHLKSLSLSNCSELSDSGL 204
Query: 93 MQVVGC-CNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCL 151
+++ NL L+L CC VTD +S +A+ CP+L + L C +T+ GL + S+CL
Sbjct: 205 TRLLSYGSNLQKLNLDCCLKVTDYGLSLVASGCPSLMSISLYRCPGITDKGLDTLASACL 384
Query: 152 MLEELDLTDCSGVNDIALKYLSR-CSKLVRLKLGLCTNISDIG-------LAHIACNCPK 203
++ ++L+ CS ++D LK ++ C +L + + C +S +G LA+I K
Sbjct: 385 SMKYVNLSYCSQISDNGLKAITHWCRQLQAINISHCEGLSGVGFERYSKTLAYIEAKSYK 564
Query: 204 LTE 206
L +
Sbjct: 565 LKQ 573
Score = 68.9 bits (167), Expect = 3e-12
Identities = 49/234 (20%), Positives = 100/234 (41%), Gaps = 25/234 (10%)
Frame = +1
Query: 1 AIDVSRCNCVSPSGLLSVISGHEGLEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGVR 60
++ +S C+ +S SGL ++S L+++N CL +
Sbjct: 160 SLSLSNCSELSDSGLTRLLSYGSNLQKLNLDCCL-------------------------K 264
Query: 61 VSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVVGCC-NLTTLDLTCCRFVTDAAIST 119
V+D+ L ++ S C SL+ + L +C G+T+ G+ + C ++ ++L+ C ++D +
Sbjct: 265 VTDYGLSLVASGCPSLMSISLYRCPGITDKGLDTLASACLSMKYVNLSYCSQISDNGLKA 444
Query: 120 IANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEE----------LDLTDCSGVNDIAL 169
I + C L + + C+ ++ +G + + +E + + G+ + +
Sbjct: 445 ITHWCRQLQAINISHCEGLSGVGFERYSKTLAYIEAKSYKLKQERVMGIVSGGGIEYLDV 624
Query: 170 KYLS--------------RCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDL 209
LS C K++ +L C +SD + IA CP L E +L
Sbjct: 625 SCLSWSVLGDPLPGIGFASCLKILNFRL--CRTVSDTSIVAIAKGCPLLEEWNL 780
Score = 47.0 bits (110), Expect = 1e-05
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 153 LEELDLTDCSGVNDIAL-KYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYR 211
L+ L L++CS ++D L + LS S L +L L C ++D GL+ +A CP L + LYR
Sbjct: 154 LKSLSLSNCSELSDSGLTRLLSYGSNLQKLNLDCCLKVTDYGLSLVASGCPSLMSISLYR 333
>TC229610 weakly similar to UP|O22512 (O22512) Grr1, partial (52%)
Length = 1428
Score = 77.0 bits (188), Expect = 1e-14
Identities = 67/266 (25%), Positives = 104/266 (38%), Gaps = 58/266 (21%)
Frame = +2
Query: 2 IDVSRCNCVSPSGLLSVISGHEGLEQINAGHC--------------------LSELSAPL 41
+D+ C+ +S GL+++ G L + C +S PL
Sbjct: 302 LDLCHCSSISNKGLIAIAEGCPNLTTLTIESCPNIGNEGLQAIARLCTKLQSISLKDCPL 481
Query: 42 TNG------LKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQV 95
L + +LS +++ ++++DF L +I K++ L LS VT G +
Sbjct: 482 VGDHGVSSLLASASNLSRVKLQTLKITDFSLAVICHYGKAITNLVLSGLKNVTERGFWVM 661
Query: 96 ---VGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLM 152
G L +L +T CR +TD +I I C NL L L C V++ GL + +
Sbjct: 662 GAAQGLQKLVSLTVTSCRGITDTSIEAIGKGCINLKQLCLHRCCFVSDSGLVAFAKAAVS 841
Query: 153 LEELDLTDCS---------------------------GVNDIALK--YLSRCSKLVRLKL 183
LE L L +C+ GV DI ++ LS C L L +
Sbjct: 842 LESLQLEECNRFTQSGIIVALANIKTKLKSLSLVKCMGVKDIDMEVCMLSPCESLRSLVI 1021
Query: 184 GLCTNISDIGLAHIACNCPKLTELDL 209
C LA I CP+L L+L
Sbjct: 1022QKCPGFGSASLAMIGKLCPRLQHLNL 1099
Score = 68.2 bits (165), Expect = 6e-12
Identities = 49/151 (32%), Positives = 70/151 (45%), Gaps = 2/151 (1%)
Frame = +2
Query: 61 VSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVVGCCN-LTTLDLTCCRFVTDAAIST 119
V++ L + C SL L L + + G+ Q+ C+ L LDL C +++ +
Sbjct: 170 VTNLGLSAVAHGCPSLRSLSLWNVSTIGDEGVSQIAKRCHILEKLDLCHCSSISNKGLIA 349
Query: 120 IANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIAL-KYLSRCSKL 178
IA CPNL L +ESC + GL I C L+ + L DC V D + L+ S L
Sbjct: 350 IAEGCPNLTTLTIESCPNIGNEGLQAIARLCTKLQSISLKDCPLVGDHGVSSLLASASNL 529
Query: 179 VRLKLGLCTNISDIGLAHIACNCPKLTELDL 209
R+KL I+D LA I +T L L
Sbjct: 530 SRVKL-QTLKITDFSLAVICHYGKAITNLVL 619
Score = 63.9 bits (154), Expect = 1e-10
Identities = 36/101 (35%), Positives = 55/101 (53%), Gaps = 1/101 (0%)
Frame = +2
Query: 110 RFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIAL 169
R VT+ +S +A+ CP+L L L + + + G+ QI C +LE+LDL CS +++ L
Sbjct: 164 RGVTNLGLSAVAHGCPSLRSLSLWNVSTIGDEGVSQIAKRCHILEKLDLCHCSSISNKGL 343
Query: 170 KYLSR-CSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDL 209
++ C L L + C NI + GL IA C KL + L
Sbjct: 344 IAIAEGCPNLTTLTIESCPNIGNEGLQAIARLCTKLQSISL 466
Score = 45.1 bits (105), Expect = 5e-05
Identities = 53/215 (24%), Positives = 83/215 (37%), Gaps = 59/215 (27%)
Frame = +2
Query: 6 RCNCVSPSGLLSVISGHEGLEQINAGHC----LSELSAPLTNGLKNLKHLSVIRIDGVRV 61
RC VS SGL++ LE + C S + L N LK LS+++ GV+
Sbjct: 785 RCCFVSDSGLVAFAKAAVSLESLQLEECNRFTQSGIIVALANIKTKLKSLSLVKCMGVKD 964
Query: 62 SDF-------------------------ILQIIGSNCKSLVELGLSKCIGVTNMGIMQVV 96
D L +IG C L L L+ G+T+ G++ ++
Sbjct: 965 IDMEVCMLSPCESLRSLVIQKCPGFGSASLAMIGKLCPRLQHLNLTGLYGITDAGLLPLL 1144
Query: 97 -------------GCCNLT----------------TLDLTCCRFVTDAAISTIANSCPNL 127
GC NLT L+L C +TDA++ IAN+ L
Sbjct: 1145ENCEAGLVNVNLTGCWNLTDKVVSALARLHGGTLEVLNLDGCWKITDASLVAIANNFLVL 1324
Query: 128 ACLKLESCDMVTEIGLYQIGSSCL-MLEELDLTDC 161
L + C +++ G+ + + L L+ L L+ C
Sbjct: 1325NDLDVSKC-AISDAGIALLSRASLPSLQVLSLSGC 1426
>TC209931 UP|PTCA_HUMAN (Q14761) Protein tyrosine phosphatase receptor type
C-associated protein (PTPRC-associated protein)
(CD45-associated protein) (CD45-AP) (Lymphocyte
phosphatase-associated phosphoprotein), partial (5%)
Length = 883
Score = 75.5 bits (184), Expect = 4e-14
Identities = 55/173 (31%), Positives = 86/173 (48%), Gaps = 3/173 (1%)
Frame = +3
Query: 41 LTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVV-GCC 99
+T+ LK S+ VRV+D LQ I NCK +++L +S C +++ G V
Sbjct: 15 ITSCCPQLKSFSIYW--NVRVTDRGLQHIVKNCKHIIDLNISGCKNISDQGAQLVADNYP 188
Query: 100 NLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLM--LEELD 157
L +L+LT C +TD + ++ + C L L L + T+ +I CL+ L+ LD
Sbjct: 189 ELESLNLTRCIKLTDDGLKSLLHKCLFLQSLNLYALSSFTDEAYRKI---CLLARLKFLD 359
Query: 158 LTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLY 210
L ++D AL +S+C L L L C ++D G+ IA C L L L+
Sbjct: 360 LCGAQNLSDEALSCISKCKNLESLNLTWCVRVTDEGVISIAKGCTSLEFLSLF 518
Score = 54.7 bits (130), Expect = 7e-08
Identities = 47/169 (27%), Positives = 75/169 (43%), Gaps = 6/169 (3%)
Frame = +3
Query: 2 IDVSRCNCVSPSGLLSVISGHEGLEQINAGHCLSELSAPLTNGLKNLKH--LSVIRIDGV 59
+++S C +S G V + LE +N C+ +GLK+L H L + ++
Sbjct: 123 LNISGCKNISDQGAQLVADNYPELESLNLTRCIKLTD----DGLKSLLHKCLFLQSLNLY 290
Query: 60 RVSDFILQIIGSNCKSLVELGLSKCIGVTNMG---IMQVVGCCNLTTLDLTCCRFVTDAA 116
+S F + C L L G N+ + + C NL +L+LT C VTD
Sbjct: 291 ALSSFTDEAYRKICL-LARLKFLDLCGAQNLSDEALSCISKCKNLESLNLTWCVRVTDEG 467
Query: 117 ISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCL-MLEELDLTDCSGV 164
+ +IA C +L L L VT+ L ++ SC + LD+ C G+
Sbjct: 468 VISIAKGCTSLEFLSLFGIVGVTDKCLEELSKSCSNKITTLDVNGCIGI 614
Score = 42.4 bits (98), Expect = 3e-04
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 29/163 (17%)
Frame = +3
Query: 1 AIDVSRCNCVSPSGLLSVISGHEGLEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGVR 60
+++++RC ++ GL S++ L+ +N + LS + + L L + + G +
Sbjct: 198 SLNLTRCIKLTDDGLKSLLHKCLFLQSLNL-YALSSFTDEAYRKICLLARLKFLDLCGAQ 374
Query: 61 -VSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVV-GCCNLTTLDLTCCRFVTDAAIS 118
+SD L I S CK+L L L+ C+ VT+ G++ + GC +L L L VTD +
Sbjct: 375 NLSDEALSCI-SKCKNLESLNLTWCVRVTDEGVISIAKGCTSLEFLSLFGIVGVTDKCLE 551
Query: 119 TIANSCPN---------------------------LACLKLES 134
++ SC N L C K+ S
Sbjct: 552 ELSKSCSNKITTLDVNGCIGIKKRSREELLQLFPYLKCFKVHS 680
Score = 37.0 bits (84), Expect = 0.014
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 142 GLYQIGSSCLMLEELDLTDCSGVNDIALKYLSR-CSKLVRLKLGLCTNISDIGLAHIACN 200
G+ I S C L+ + V D L+++ + C ++ L + C NISD G +A N
Sbjct: 3 GIEAITSCCPQLKSFSIYWNVRVTDRGLQHIVKNCKHIIDLNISGCKNISDQGAQLVADN 182
Query: 201 CPKLTELDLYR 211
P+L L+L R
Sbjct: 183 YPELESLNLTR 215
>TC215543 similar to UP|Q8LDN3 (Q8LDN3) F-box protein AtFBL5, partial (46%)
Length = 549
Score = 73.9 bits (180), Expect = 1e-13
Identities = 52/184 (28%), Positives = 81/184 (43%), Gaps = 3/184 (1%)
Frame = +3
Query: 25 LEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGV--RVSDFILQIIGSNCKSLVELGLS 82
L ++N C + L + L V+ + G SD LQ IG C L L L
Sbjct: 15 LTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVKAASDTALQAIGHYCNQLQFLNLG 194
Query: 83 KCIGVTNMGIMQVV-GCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEI 141
C V+++G+M + GC +L TLDL C +TD ++ +AN CP+L L L C +T+
Sbjct: 195 WCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIVLANRCPHLRSLGLYYCQSITDK 374
Query: 142 GLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISDIGLAHIACNC 201
+Y + S L G +D L+ L + CT ++ + + +C
Sbjct: 375 AMYSLAQSKLNNRMWGSVKGGGNDDDGLR---------TLNISQCTALTPSAVQAVCDSC 527
Query: 202 PKLT 205
P T
Sbjct: 528 PSFT 539
Score = 53.9 bits (128), Expect = 1e-07
Identities = 30/86 (34%), Positives = 46/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 126 NLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDC-SGVNDIALKYLSR-CSKLVRLKL 183
+L L + C ++ L + S C L+ L+L C +D AL+ + C++L L L
Sbjct: 12 DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVKAASDTALQAIGHYCNQLQFLNL 191
Query: 184 GLCTNISDIGLAHIACNCPKLTELDL 209
G C N+SD+G+ +A CP L LDL
Sbjct: 192 GWCENVSDVGVMSLAYGCPDLRTLDL 269
>TC226686 homologue to UP|O22512 (O22512) Grr1, complete
Length = 2818
Score = 70.5 bits (171), Expect = 1e-12
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Frame = +1
Query: 2 IDVSRCNCVSPSGLLSVIS----------------GHEGLEQINAGHCLSELSAPLTN-- 43
+D+ +C +S L++V G+EGL+ I G C + S + N
Sbjct: 790 LDLCKCPNISDKTLIAVAKNCPNLAELSIESCPNIGNEGLQAI--GKCPNLRSISIKNCS 963
Query: 44 -----GLKNLKH-----LSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIM 93
G+ L L+ ++++ + VSD L +IG ++ +L LS V+ G
Sbjct: 964 GVGDQGVAGLLSSASFALTKVKLESLNVSDLSLAVIGHYGIAVTDLVLSCLPNVSEKGFW 1143
Query: 94 QVV---GCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSC 150
+ G LT++ + CCR VTD + I CPN+ KL C +++ GL +
Sbjct: 1144 VMGNGHGLQKLTSITIDCCRGVTDVGLEAIGRGCPNVQNFKLRKCAFLSDKGLVSFARAA 1323
Query: 151 LMLEELDLTDCSGVNDIAL--KYLSRCSKLVRLKLGLCTNISDIGL 194
+E L L +C + I L + + +KL L L C I D+ +
Sbjct: 1324 PSVESLQLQECHRITQIGLFGVFFNCGAKLKVLTLISCYGIKDLNM 1461
Score = 65.1 bits (157), Expect = 5e-11
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Frame = +1
Query: 41 LTNGLKNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVVGCCN 100
+ +G L+ L + + + SD L + NC +L EL + C + N G+ + C N
Sbjct: 760 IASGCHQLEKLDLCKCPNI--SDKTLIAVAKNCPNLAELSIESCPNIGNEGLQAIGKCPN 933
Query: 101 LTTLDLTCCRFVTDAAISTIANSCP-NLACLKLESCDMVTEIGLYQIGSSCLMLEELDLT 159
L ++ + C V D ++ + +S L +KLES + V+++ L IG + + +L L+
Sbjct: 934 LRSISIKNCSGVGDQGVAGLLSSASFALTKVKLESLN-VSDLSLAVIGHYGIAVTDLVLS 1110
Query: 160 DCSGVNDIALKYLSR---CSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRR*WAS 216
V++ + KL + + C ++D+GL I CP + L R A
Sbjct: 1111CLPNVSEKGFWVMGNGHGLQKLTSITIDCCRGVTDVGLEAIGRGCPNVQNFKL--RKCAF 1284
Query: 217 STDNRMQQVGHAQPSI 232
+D + A PS+
Sbjct: 1285LSDKGLVSFARAAPSV 1332
Score = 63.2 bits (152), Expect = 2e-10
Identities = 38/114 (33%), Positives = 55/114 (47%), Gaps = 1/114 (0%)
Frame = +1
Query: 97 GCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEEL 156
G LT R VT+ + IA+ CP+L L V ++GL +I S C LE+L
Sbjct: 613 GLGKLTIRGCNSDRGVTNVGLKAIAHGCPSLKVCSLWDVATVGDVGLIEIASGCHQLEKL 792
Query: 157 DLTDCSGVNDIALKYLSR-CSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDL 209
DL C ++D L +++ C L L + C NI + GL I CP L + +
Sbjct: 793 DLCKCPNISDKTLIAVAKNCPNLAELSIESCPNIGNEGLQAIG-KCPNLRSISI 951
Score = 58.9 bits (141), Expect = 4e-09
Identities = 53/223 (23%), Positives = 93/223 (40%), Gaps = 31/223 (13%)
Frame = +1
Query: 10 VSPSGLLSVISGHEGLEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGV-RVSDFILQI 68
V GL+ + SG LE+++ C + L KN +L+ + I+ + + LQ
Sbjct: 736 VGDVGLIEIASGCHQLEKLDLCKCPNISDKTLIAVAKNCPNLAELSIESCPNIGNEGLQA 915
Query: 69 IGSNCKSLVELGLSKCIGVTNMGIMQVVGCCN---------------------------L 101
IG C +L + + C GV + G+ ++ + +
Sbjct: 916 IGK-CPNLRSISIKNCSGVGDQGVAGLLSSASFALTKVKLESLNVSDLSLAVIGHYGIAV 1092
Query: 102 TTLDLTCCRFVTDAAISTIANS--CPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLT 159
T L L+C V++ + N L + ++ C VT++GL IG C ++ L
Sbjct: 1093TDLVLSCLPNVSEKGFWVMGNGHGLQKLTSITIDCCRGVTDVGLEAIGRGCPNVQNFKLR 1272
Query: 160 DCSGVNDIALKYLSRCSKLVR-LKLGLCTNISDIGLAHIACNC 201
C+ ++D L +R + V L+L C I+ IGL + NC
Sbjct: 1273KCAFLSDKGLVSFARAAPSVESLQLQECHRITQIGLFGVFFNC 1401
>TC216301 similar to UP|O22512 (O22512) Grr1, partial (38%)
Length = 1688
Score = 68.9 bits (167), Expect = 3e-12
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 7/241 (2%)
Frame = +3
Query: 1 AIDVSRCNCVSPSGLLSVISGHEGLEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGV- 59
++ V+ C V+ GL +V G L+ + C L + K L +R++
Sbjct: 60 SLTVASCKGVTDIGLEAVGKGCPNLKIAHLHKCAFLSDNGLISFAKAASSLESLRLEECH 239
Query: 60 RVSDFILQIIGSNCKS-LVELGLSKCIGVTNMGIM--QVVGCCNLTTLDLTCCRFVTDAA 116
R++ + NC + L + L C G+ ++ ++ V C +L +L ++ C +A+
Sbjct: 240 RITQLGFFGVLFNCGAKLKAISLVSCYGIKDLNLVLPTVSPCESLRSLSISNCPGFGNAS 419
Query: 117 ISTIANSCPNLACLKLESCDMVTEIGLYQI-GSSCLMLEELDLTDCSGVNDIALKYLSRC 175
+S + CP L ++L + VT+ GL + SS L +++L+ C+ + D + L+
Sbjct: 420 LSVLGKLCPQLQHVELSGLEGVTDAGLLPLLESSEAGLVKVNLSGCTNITDKVVSSLANL 599
Query: 176 S--KLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRR*WASSTDNRMQQVGHAQPSIL 233
L L L C NISD L IA NC L +LD+ + + TD + + HA+ L
Sbjct: 600 HGWTLENLNLDGCKNISDASLMAIAENCALLCDLDVSK---CTITDAGIAVLAHAEQINL 770
Query: 234 Q 234
Q
Sbjct: 771 Q 773
Score = 53.5 bits (127), Expect = 1e-07
Identities = 34/142 (23%), Positives = 58/142 (39%), Gaps = 29/142 (20%)
Frame = +3
Query: 97 GCCNLTTLDLTCCRFVTDAAISTIANSCPN--------------------------LACL 130
G L +L + C+ VTD + + CPN L L
Sbjct: 42 GLQKLKSLTVASCKGVTDIGLEAVGKGCPNLKIAHLHKCAFLSDNGLISFAKAASSLESL 221
Query: 131 KLESCDMVTEIGLYQIGSSC-LMLEELDLTDCSGVND--IALKYLSRCSKLVRLKLGLCT 187
+LE C +T++G + + +C L+ + L C G+ D + L +S C L L + C
Sbjct: 222 RLEECHRITQLGFFGVLFNCGAKLKAISLVSCYGIKDLNLVLPTVSPCESLRSLSISNCP 401
Query: 188 NISDIGLAHIACNCPKLTELDL 209
+ L+ + CP+L ++L
Sbjct: 402 GFGNASLSVLGKLCPQLQHVEL 467
Score = 27.7 bits (60), Expect = 8.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 177 KLVRLKLGLCTNISDIGLAHIACNCPKLTELDLYRR*WASSTDNRMQQVGHAQPSI 232
KL L + C ++DIGL + CP L L++ A +DN + A S+
Sbjct: 51 KLKSLTVASCKGVTDIGLEAVGKGCPNLKIAHLHK--CAFLSDNGLISFAKAASSL 212
>BI427115 similar to GP|13605655|gb AT4g15470/dl3775w {Arabidopsis thaliana},
partial (22%)
Length = 421
Score = 68.6 bits (166), Expect = 4e-12
Identities = 33/123 (26%), Positives = 66/123 (52%), Gaps = 1/123 (0%)
Frame = +2
Query: 69 IGSNCKSLVELGLSKCIGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLA 128
+G +CKSL +L + C V + + + C+L L+++ C + DA + IA CP L
Sbjct: 53 VGKHCKSLTDLSIRFCDRVGDGALTAIAEGCSLHYLNVSGCHQIGDAGVIAIARGCPQLC 232
Query: 129 CLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSR-CSKLVRLKLGLCT 187
L + + ++ + ++G C +L+E+ L+ C + D+ L +L + C+ L ++ C+
Sbjct: 233 YLDVSVLQNLGDMAMAELGEHCTLLKEIVLSHCRQITDVGLTHLVKSCTLLESCQMVYCS 412
Query: 188 NIS 190
I+
Sbjct: 413 GIT 421
>TC215542
Length = 1695
Score = 65.1 bits (157), Expect = 5e-11
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 26/224 (11%)
Frame = +3
Query: 2 IDVSRCNCVSPSGLLSVISGHEGLEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGV-- 59
+D+S+ ++ L + G L ++N C + L + L V+ + G
Sbjct: 510 LDLSKSFKLTDRSLYELALGCRDLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVR 689
Query: 60 RVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVV-GCCNLTTLDLTCCRFVTDAAIS 118
SD LQ IG C L L L C V ++G+ + GC +L +DL C +TD ++
Sbjct: 690 AASDTALQAIGQYCNQLQSLNLGWCDNVGDVGVTTLAYGCPDLRIVDLCGCVRITDDSVI 869
Query: 119 TIANSCPNLACLKLESCDMVTEIGLYQIGSSCLM----------------LEELDLTDCS 162
+A CP+L L L C +T+ +Y + S + L L+++ C+
Sbjct: 870 ALATRCPHLRSLGLYYCKNITDRAMYSLAHSKVNNRMWGTVKGGGNDEDGLRTLNISQCT 1049
Query: 163 GVNDIALK-------YLSRCSKLVRLKLGLCTNISDIGLAHIAC 199
+ A++ L CS L + C N++ + H AC
Sbjct: 1050ALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSV---HCAC 1172
Score = 62.8 bits (151), Expect = 2e-10
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 30/164 (18%)
Frame = +3
Query: 76 LVELGLSKCI-GVTNMGIMQVVGCCNLTTLDLTCCR-FVTDAAISTIANSCPNLACLKLE 133
L L LS C + N+ + V L TL L + + D A+ TIA C L L L
Sbjct: 342 LARLSLSWCSKNMNNLVLSLVPKFAKLQTLILRQDKPQLEDNAVETIAKCCHELQILDLS 521
Query: 134 SCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSR------------------- 174
+T+ LY++ C L +L+++ CS +D AL YL+
Sbjct: 522 KSFKLTDRSLYELALGCRDLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAASD 701
Query: 175 ---------CSKLVRLKLGLCTNISDIGLAHIACNCPKLTELDL 209
C++L L LG C N+ D+G+ +A CP L +DL
Sbjct: 702 TALQAIGQYCNQLQSLNLGWCDNVGDVGVTTLAYGCPDLRIVDL 833
>TC233063
Length = 775
Score = 60.1 bits (144), Expect = 2e-09
Identities = 48/151 (31%), Positives = 68/151 (44%), Gaps = 10/151 (6%)
Frame = +3
Query: 69 IGSNCKSLVELGLSKCIGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLA 128
I C L + L + +NM + V+ C L LD+ C + DAAI A SCP L
Sbjct: 78 IAVRCPQLETMSLKR----SNMAQV-VLNCPLLHELDIGSCHKLPDAAIRAAATSCPQLV 242
Query: 129 CLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTN 188
L + +C V++ L +I SC L LD + CS ++ ++ R L LKL C
Sbjct: 243 SLDMSNCSCVSDETLREIALSCANLSFLDASYCSNISLESV----RLPMLTVLKLHSCEG 410
Query: 189 ISDIGLAHIA----------CNCPKLTELDL 209
I+ +A IA NC LT + L
Sbjct: 411 ITSASMAAIAHSYMLEVLELDNCSLLTSVSL 503
Score = 41.2 bits (95), Expect = 8e-04
Identities = 36/177 (20%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Frame = +3
Query: 1 AIDVSRCNCVSPSGLLSVISGHEGLEQINAGHC----LSELSAPLTNGLKNLKHLSVIRI 56
++D+S C+CVS L + L ++A +C L + P+ LK +
Sbjct: 243 SLDMSNCSCVSDETLREIALSCANLSFLDASYCSNISLESVRLPMLTVLKLHSCEGITSA 422
Query: 57 DGVRVS-DFILQIIG-SNCKSLVELGLSKCIGVTNMGIMQVVGCCNLTTLDLTCCRFVTD 114
++ ++L+++ NC L + L + + +++V C L+L T
Sbjct: 423 SMAAIAHSYMLEVLELDNCSLLTSVSLD----LPRLQTIRLVHCRKFADLNLR-----TM 575
Query: 115 AAISTIANSCP-----NLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVND 166
S + ++CP N+ L+ + + L + C L+E+DL++C + +
Sbjct: 576 MLSSILVSNCPALHRINITSNSLQKLALQKQDSLTTLALQCQSLQEVDLSECESLTN 746
>TC221380
Length = 307
Score = 59.3 bits (142), Expect = 3e-09
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +2
Query: 344 RIKKVKLQRSLEFSISSEILETIHERGCKVRW 375
RIKKVKLQRSL FS+SSE+LET+H RGCK+RW
Sbjct: 2 RIKKVKLQRSLRFSLSSEMLETMHARGCKIRW 97
>TC218546 similar to GB|AAM91352.1|22137014|AY133522 At5g23340/MKD15_20
{Arabidopsis thaliana;} , partial (20%)
Length = 696
Score = 58.5 bits (140), Expect = 5e-09
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Frame = +2
Query: 50 HLSVIRIDGVR-VSDFILQIIGSNC-KSLVELGLSKCIGVTNMGIMQVVGCC-NLTTLDL 106
+L + I G R VS ++ + + C SL L + C+ +++ + V+ C NL LD+
Sbjct: 35 NLETLIIGGCRDVSADAIRSLAAACGSSLKNLRMDWCLNISDSSLSCVLSQCRNLEALDI 214
Query: 107 TCCRFVTDAAISTIANSCPNLA--CLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGV 164
CC +TDAA ++N P L+ LK+ +C +T G+ I C L+ LD+ C +
Sbjct: 215 GCCEELTDAAFQLLSNEEPGLSLKILKISNCPKITVAGIGIIVGKCTSLQYLDVRSCPHI 394
Query: 165 NDIAL 169
L
Sbjct: 395 TKAGL 409
Score = 38.9 bits (89), Expect = 0.004
Identities = 27/104 (25%), Positives = 47/104 (44%), Gaps = 15/104 (14%)
Frame = +2
Query: 117 ISTIANSCPNLACLKLESCDMVTEIGLYQIGSSC-LMLEELDLTDCSGVNDIALK-YLSR 174
I ++A C NL L + C V+ + + ++C L+ L + C ++D +L LS+
Sbjct: 8 ILSLAEFCGNLETLIIGGCRDVSADAIRSLAAACGSSLKNLRMDWCLNISDSSLSCVLSQ 187
Query: 175 CSKLVRLKLGLCTNISDIGLAHIA-------------CNCPKLT 205
C L L +G C ++D ++ NCPK+T
Sbjct: 188 CRNLEALDIGCCEELTDAAFQLLSNEEPGLSLKILKISNCPKIT 319
Score = 34.3 bits (77), Expect = 0.094
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 143 LYQIGSSCLMLEELDLTDCSGVNDIALKYLSRC--SKLVRLKLGLCTNISDIGLAHIACN 200
+ + C LE L + C V+ A++ L+ S L L++ C NISD L+ +
Sbjct: 8 ILSLAEFCGNLETLIIGGCRDVSADAIRSLAAACGSSLKNLRMDWCLNISDSSLSCVLSQ 187
Query: 201 CPKLTELDL 209
C L LD+
Sbjct: 188 CRNLEALDI 214
>AI900426
Length = 366
Score = 58.2 bits (139), Expect = 6e-09
Identities = 36/107 (33%), Positives = 52/107 (47%), Gaps = 3/107 (2%)
Frame = +3
Query: 59 VRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQV---VGCCNLTTLDLTCCRFVTDA 115
+ ++DF L +I K++ L LS VT G + G L +L +T CR VTD
Sbjct: 12 LNITDFSLAVICHYGKAITNLVLSGLKNVTERGFWVMGAAQGLQKLLSLTVTACRXVTDT 191
Query: 116 AISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCS 162
+I I C NL L L C V++ GL + + LE L L +C+
Sbjct: 192 SIEAIGKGCINLKHLCLRRCCFVSDNGLVAFAKAAISLESLQLEECN 332
Score = 42.4 bits (98), Expect = 3e-04
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +3
Query: 46 KNLKHLSVIRIDGVRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQV-VGCCNLTTL 104
K + +L + + V F + + L+ L ++ C VT+ I + GC NL L
Sbjct: 57 KAITNLVLSGLKNVTERGFWVMGAAQGLQKLLSLTVTACRXVTDTSIEAIGKGCINLKHL 236
Query: 105 DLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGL 143
L C FV+D + A + +L L+LE C+ T+ G+
Sbjct: 237 CLRRCCFVSDNGLVAFAKAAISLESLQLEECNRFTQSGI 353
>BM887272
Length = 436
Score = 57.4 bits (137), Expect = 1e-08
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Frame = +1
Query: 43 NGLKNLKHLSVIRIDG-VRVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVV-GCCN 100
N + L+HL + ++ + + D L + ++CKS+ L LSKC + ++GI + G N
Sbjct: 43 NHILQLEHLEDLILEHCLGIEDHGLATLQASCKSMKMLNLSKCQNIGHIGIASLTSGSQN 222
Query: 101 LTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTD 160
L L L+ VT ++ S L +KL+SC + T+ GL IG+ L+EL+L+
Sbjct: 223 LEKLILSSSVIVT-TDLAKCLQSFSRLQSVKLDSC-LGTKSGLKAIGNLGASLKELNLSK 396
Query: 161 CSGVNDIALKYL 172
C GV D L +L
Sbjct: 397 CVGVTDENLPFL 432
Score = 45.1 bits (105), Expect = 5e-05
Identities = 26/88 (29%), Positives = 49/88 (55%)
Frame = +1
Query: 2 IDVSRCNCVSPSGLLSVISGHEGLEQINAGHCLSELSAPLTNGLKNLKHLSVIRIDGVRV 61
+++S+C + G+ S+ SG + LE++ + ++ L L++ L +++D
Sbjct: 154 LNLSKCQNIGHIGIASLTSGSQNLEKLILSSSVI-VTTDLAKCLQSFSRLQSVKLDSCLG 330
Query: 62 SDFILQIIGSNCKSLVELGLSKCIGVTN 89
+ L+ IG+ SL EL LSKC+GVT+
Sbjct: 331 TKSGLKAIGNLGASLKELNLSKCVGVTD 414
Score = 28.1 bits (61), Expect = 6.7
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 126 NLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSK 177
+L L LE C + + GL + +SC ++ L+L+ C + I + L+ S+
Sbjct: 64 HLEDLILEHCLGIEDHGLATLQASCKSMKMLNLSKCQNIGHIGIASLTSGSQ 219
>BE806321 similar to GP|2407790|gb| grr1 {Glycine max}, partial (19%)
Length = 434
Score = 44.7 bits (104), Expect(2) = 5e-08
Identities = 24/67 (35%), Positives = 37/67 (54%), Gaps = 1/67 (1%)
Frame = +2
Query: 120 IANSCPNLACLKLESCDMVTEIGLYQ-IGSSCLMLEELDLTDCSGVNDIALKYLSRCSKL 178
IA +C NL L ESC + G+Y+ +G C L+ + + DC+GV+D + L + L
Sbjct: 221 IAKNCQNLTELSFESCPNIGNEGVYELLGKLCSNLKSISIKDCTGVSDHGIAGLLSSTSL 400
Query: 179 VRLKLGL 185
V K+ L
Sbjct: 401 VLSKVKL 421
Score = 43.9 bits (102), Expect = 1e-04
Identities = 21/57 (36%), Positives = 30/57 (51%)
Frame = +3
Query: 110 RFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVND 166
R VT + +A CP+L L L + V + GL +I + C LE+LDL C + D
Sbjct: 33 RGVTSHGLKAVARGCPSLKALSLWNVATVGDEGLIEIANGCHQLEKLDLCKCPAITD 203
Score = 30.0 bits (66), Expect(2) = 5e-08
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 66 LQIIGSNCKSLVELGLSKCIGVTNMGIMQVV-GCCNLTTLDLTCCRFVTD 114
L+ + C SL L L V + G++++ GC L LDL C +TD
Sbjct: 54 LKAVARGCPSLKALSLWNVATVGDEGLIEIANGCHQLEKLDLCKCPAITD 203
>TC214530
Length = 818
Score = 52.0 bits (123), Expect = 4e-07
Identities = 41/138 (29%), Positives = 64/138 (45%), Gaps = 5/138 (3%)
Frame = +1
Query: 60 RVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAIST 119
+++D L +C + L L C + + G+ + NLT LDL+ V +
Sbjct: 241 QLTDGCLSATTVSCPLIESLILMSCSSIGSEGLRSLYCLPNLTVLDLSYTFLVN---MQP 411
Query: 120 IANSCPNLACLKLESCDMVTEIGLYQI--GSSCLMLEELDL---TDCSGVNDIALKYLSR 174
I +SC L LKL++C +T+ L + G + L+ELDL T C D L Y
Sbjct: 412 IFDSCLQLKVLKLQACKYLTDTSLEPLYKGGALPALQELDLSYGTLCQSAIDELLAY--- 582
Query: 175 CSKLVRLKLGLCTNISDI 192
C+ L + L C N+ D+
Sbjct: 583 CTNLTHVSLTGCVNMHDL 636
Score = 44.3 bits (103), Expect = 9e-05
Identities = 45/137 (32%), Positives = 60/137 (42%), Gaps = 3/137 (2%)
Frame = +1
Query: 76 LVELGLSKCIGVTNMGIMQVVGCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESC 135
+V L L C GV + + C L +LD + C +TD +S SCP + L L SC
Sbjct: 148 MVSLELKGC-GVLSEAF---INCPLLASLDASFCSQLTDGCLSATTVSCPLIESLILMSC 315
Query: 136 DMVTEIGLYQIGSSCL-MLEELDLTDCSGVNDIALKYLSRCSKLVRLKLGLCTNISDIGL 194
+ GL + CL L LDL+ VN C +L LKL C ++D L
Sbjct: 316 SSIGSEGLRSL--YCLPNLTVLDLSYTFLVN--MQPIFDSCLQLKVLKLQACKYLTDTSL 483
Query: 195 AHI--ACNCPKLTELDL 209
+ P L ELDL
Sbjct: 484 EPLYKGGALPALQELDL 534
Score = 31.2 bits (69), Expect = 0.79
Identities = 24/86 (27%), Positives = 40/86 (45%)
Frame = +1
Query: 123 SCPNLACLKLESCDMVTEIGLYQIGSSCLMLEELDLTDCSGVNDIALKYLSRCSKLVRLK 182
+CPNL + L+ CD + +G L L+L C +N ++++ +V L+
Sbjct: 10 TCPNLEKVILDGCDHLERASFCPVG-----LLSLNLGICPKLNTLSIE----APFMVSLE 162
Query: 183 LGLCTNISDIGLAHIACNCPKLTELD 208
L C +S+ + NCP L LD
Sbjct: 163 LKGCGVLSEAFI-----NCPLLASLD 225
>BM308976 weakly similar to GP|13605809|gb At2g17020 {Arabidopsis thaliana},
partial (21%)
Length = 434
Score = 52.0 bits (123), Expect = 4e-07
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Frame = +2
Query: 43 NGLKNLKHLSVIRIDGV------RVSDFILQIIGSNCKSLVELGLSKCIGVTNMGIMQVV 96
N L LKHLS++R RV+D L ++ C ++ + L VT+ G ++
Sbjct: 8 NQLGRLKHLSLVRSQEFQITYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGFKTIL 187
Query: 97 -GCCNLTTLDLTCCRFVTDAAISTIANSCPNLACLKLESCDMVTEIGLYQIGSSCLMLEE 155
C L L +T +TD I+ + L + L C+++T + + S+ +L+
Sbjct: 188 HSCTRLYKLKVTHGTHLTDLVFHDISATSLTLTHVSLRRCNLLTNHAVLSLASN-KVLKI 364
Query: 156 LDLTDCSGVNDIALKYLSRCSKL 178
LDL DC + D AL+ + +L
Sbjct: 365 LDLRDCRSLGDEALQAIGTLPRL 433
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.336 0.145 0.470
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,597,979
Number of Sequences: 63676
Number of extensions: 292119
Number of successful extensions: 2497
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 2305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2420
length of query: 375
length of database: 12,639,632
effective HSP length: 99
effective length of query: 276
effective length of database: 6,335,708
effective search space: 1748655408
effective search space used: 1748655408
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC144541.17