TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144541.14 - phase: 0 
         (63 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC205246 similar to UP|Q6TUH7 (Q6TUH7) LRRGT00067, partial (7%)       111  6e-26
TC205244 similar to UP|Q6IDC4 (Q6IDC4) At5g27860, partial (39%)       111  6e-26
TC205247                                                              109  2e-25

>TC205246 similar to UP|Q6TUH7 (Q6TUH7) LRRGT00067, partial (7%)
          Length = 1009

 Score =  111 bits (278), Expect = 6e-26
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = +3

Query: 4   ERSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNASFD 63
           ERSSSPVQLSKFLGR+KDDGVRRSAVSGKKILLKL+KTKEDK AESKRNELLNFLNASFD
Sbjct: 378 ERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 557


>TC205244 similar to UP|Q6IDC4 (Q6IDC4) At5g27860, partial (39%)
          Length = 625

 Score =  111 bits (278), Expect = 6e-26
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = +1

Query: 4   ERSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNASFD 63
           ERSSSPVQLSKFLGR+KDDGVRRSAVSGKKILLKL+KTKEDK AESKRNELLNFLNASFD
Sbjct: 427 ERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 606


>TC205247 
          Length = 1143

 Score =  109 bits (273), Expect = 2e-25
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = +1

Query: 4   ERSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNASFD 63
           ERSSSPVQLSKFLG +KDDGVRRSAVSGKKILLKL+KTKEDK AESKRNELLNFLNASFD
Sbjct: 478 ERSSSPVQLSKFLGHDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 657


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.307    0.129    0.336 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,866,994
Number of Sequences: 63676
Number of extensions: 13815
Number of successful extensions: 49
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of query: 63
length of database: 12,639,632
effective HSP length: 39
effective length of query: 24
effective length of database: 10,156,268
effective search space: 243750432
effective search space used: 243750432
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 52 (24.6 bits)