BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144539.12 + phase: 0
(417 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC220739 weakly similar to UP|PRP4_HUMAN (O43172) U4/U6 small nu... 84 1e-16
TC208265 similar to UP|Q6S7B0 (Q6S7B0) TAF5, partial (36%) 79 5e-15
TC207354 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat prot... 75 5e-14
TC209542 71 8e-13
TC228794 similar to UP|Q6V8V0 (Q6V8V0) Transducin-like (Fragment... 69 5e-12
TC204561 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-... 65 4e-11
TC229098 similar to PIR|T46032|T46032 WD-40 repeat regulatory pr... 64 2e-10
TC222379 homologue to UP|Q9HGV7 (Q9HGV7) Gbeta like protein, par... 63 3e-10
TC220018 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana geno... 62 5e-10
TC228488 similar to UP|Q8LF96 (Q8LF96) PRL1 protein, partial (70%) 61 8e-10
TC209377 similar to UP|Q9FLX9 (Q9FLX9) Notchless protein homolog... 60 1e-09
TC226136 similar to UP|O48847 (O48847) Expressed protein (At2g32... 60 2e-09
TC208379 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana geno... 59 3e-09
TC205059 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-... 59 4e-09
TC228588 similar to UP|Q6NLV4 (Q6NLV4) At5g13480, partial (29%) 58 9e-09
BI784574 similar to GP|16323188|gb AT5g67320/K8K14_4 {Arabidopsi... 58 9e-09
TC207353 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat prot... 57 2e-08
TC221163 57 2e-08
TC223729 similar to UP|Q9XI24 (Q9XI24) F9L1.40 protein, partial ... 56 3e-08
TC216518 weakly similar to UP|Q9LW87 (Q9LW87) Coatomer protein c... 55 4e-08
>TC220739 weakly similar to UP|PRP4_HUMAN (O43172) U4/U6 small nuclear
ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDa protein) (WD
splicing factor Prp4) (hPrp4), partial (34%)
Length = 1206
Score = 84.0 bits (206), Expect = 1e-16
Identities = 46/125 (36%), Positives = 63/125 (49%)
Frame = +1
Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
+K GH + + F SG+Y+ T S D+ ++W +ET L GH + LA +
Sbjct: 298 LKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGDELLLQEGHSRSVYGLAFHN 477
Query: 294 NNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCR 353
+ +L AS D + RVW L G I L GH V I+FSP Y L + +D TCR
Sbjct: 478 DGSLAASCGLDSLARVWDLRTGRSILALEGHVKPVLGISFSPNG---YHLATGGEDNTCR 648
Query: 354 IWDAR 358
IWD R
Sbjct: 649 IWDLR 663
Score = 62.8 bits (151), Expect = 3e-10
Identities = 31/120 (25%), Positives = 54/120 (44%)
Frame = +1
Query: 239 GHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALV 298
GH +VY F G + D L ++W + T S+ + GHV + ++ S N +
Sbjct: 439 GHSRSVYGLAFHNDGSLAASCGLDSLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHL 618
Query: 299 ASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR 358
A+ D R+W L + H+ ++ + F P Y L+++S D T ++W R
Sbjct: 619 ATGGEDNTCRIWDLRKKKSFYTIPAHSNLISQVKFEPHEG--YFLVTASYDMTAKVWSGR 792
Score = 51.6 bits (122), Expect = 6e-07
Identities = 44/168 (26%), Positives = 71/168 (42%)
Frame = +1
Query: 249 FDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIR 308
F R G+++ T S K+WSM + +GH TD+A S + +A++S D +
Sbjct: 97 FSRDGKWLATCSLTGASKLWSMPKIKKHSIFKGHTERATDVAYSPVHDHLATASADRTAK 276
Query: 309 VWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSTPRLYV 368
W G + GH + IAF P L ++S D T R+WD
Sbjct: 277 YWN--QGSLLKTFEGHLDRLARIAFHPSGK---YLGTASFDKTWRLWDI----------- 408
Query: 369 PKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNLARVY 416
+ D G S ++ AF+ +G++ + D+LARV+
Sbjct: 409 -ETGDELLLQEG-------HSRSVYGLAFHNDGSLAASCGLDSLARVW 528
Score = 49.3 bits (116), Expect = 3e-06
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Frame = +1
Query: 232 QNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAV 291
++I + GH V F +G ++ TG +D +IW + S + H I+ +
Sbjct: 544 RSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSFYTIPAHSNLISQVKF 723
Query: 292 SSNNA-LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDG 350
+ + ++S D +VW D P+ L GH VT++ ++ ++ S D
Sbjct: 724 EPHEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLGDGGSI---VTVSHDR 894
Query: 351 TCRIWDARYT 360
T ++W + T
Sbjct: 895 TIKLWSSNPT 924
Score = 39.7 bits (91), Expect = 0.003
Identities = 20/84 (23%), Positives = 40/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 228 VQKMQNIKRIRGHCNAVYCAIFD-RSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDI 286
++K ++ I H N + F+ G +++T S D K+WS + + GH +
Sbjct: 658 LRKKKSFYTIPAHSNLISQVKFEPHEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKV 837
Query: 287 TDLAVSSNNALVASSSNDYIIRVW 310
T + V + + + S+D I++W
Sbjct: 838 TSVDVLGDGGSIVTVSHDRTIKLW 909
>TC208265 similar to UP|Q6S7B0 (Q6S7B0) TAF5, partial (36%)
Length = 1048
Score = 78.6 bits (192), Expect = 5e-15
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Frame = +2
Query: 228 VQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDIT 287
+ ++Q ++ + GH + V C + + Y+ TGS D+ V++W +++ + GH G I
Sbjct: 200 MDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRVFVGHRGMIL 379
Query: 288 DLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSS 347
LA+S + +AS D I +W L G ++ L GHT V ++AFS + + S S
Sbjct: 380 SLAMSPDGRYMASGDEDGTIMMWDLSSGRCLTPLIGHTSCVWSLAFSSEGSVI---ASGS 550
Query: 348 DDGTCRIWDARYTHSTPRLYVPKPSDSTGRSSG--PSSNTMP-QSHQIFCCAFNANGTVF 404
D T ++WD + R ++ G S+ S T+P +S ++ F+ +F
Sbjct: 551 ADCTVKLWDVNTSTKVSR------AEEKGGSANRLRSLKTLPTKSTPVYSLRFSRRNLLF 712
Query: 405 VTGS 408
G+
Sbjct: 713 AAGA 724
Score = 77.8 bits (190), Expect = 8e-15
Identities = 49/184 (26%), Positives = 85/184 (45%)
Frame = +2
Query: 233 NIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVS 292
N+ +GH V+ F G Y + S DR +IWSM+ L GH+ D+ +
Sbjct: 89 NLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWH 268
Query: 293 SNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
+N +A+ S+D +R+W + G + V GH G + ++A SP + S +DGT
Sbjct: 269 ANCNYIATGSSDKTVRLWDVQSGECVRVFVGHRGMILSLAMSPDGR---YMASGDEDGTI 439
Query: 353 RIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNL 412
+WD S+GR P + + ++ AF++ G+V +GS+D
Sbjct: 440 MMWDL----------------SSGRCLTP---LIGHTSCVWSLAFSSEGSVIASGSADCT 562
Query: 413 ARVY 416
+++
Sbjct: 563 VKLW 574
>TC207354 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat protein 5,
partial (57%)
Length = 1124
Score = 75.1 bits (183), Expect = 5e-14
Identities = 52/187 (27%), Positives = 89/187 (46%), Gaps = 2/187 (1%)
Frame = +1
Query: 232 QNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAV 291
+++K + H NAV C F G + + S D+ + IWS T GH I+DLA
Sbjct: 109 RHLKTLTDHENAVSCVKFSNDGTLLASASLDKTLIIWSSATLTLCHRLVGHSEGISDLAW 288
Query: 292 SSNNALVASSSNDYIIRVW-RLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDG 350
SS++ + S+S+D +R+W G I +LRGH AV + F+P+ + ++S S D
Sbjct: 289 SSDSHYICSASDDRTLRIWDATVGGGCIKILRGHDDAVFCVNFNPQSS---YIVSGSFDE 459
Query: 351 TCRIWDARYTHSTPRLYVPKPSDSTGRSSGP-SSNTMPQSHQIFCCAFNANGTVFVTGSS 409
T ++WD + TG+ +TMP + +N +G + ++ S
Sbjct: 460 TIKVWDVK----------------TGKCVHTIKGHTMP----VTSVHYNRDGNLIISASH 579
Query: 410 DNLARVY 416
D +++
Sbjct: 580 DGSCKIW 600
Score = 67.8 bits (164), Expect = 9e-12
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = +1
Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
IK +RGH +AV+C F+ Y+++GS D +K+W ++T + + +GH +T + +
Sbjct: 370 IKILRGHDDAVFCVNFNPQSSYIVSGSFDETIKVWDVKTGKCVHTIKGHTMPVTSVHYNR 549
Query: 294 NNALVASSSNDYIIRVWRLPDG-LPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
+ L+ S+S+D ++W G L +++ AV+ FSP + L+++ + T
Sbjct: 550 DGNLIISASHDGSCKIWDTETGNLLKTLIEDKAPAVSFAKFSPNGKLI---LAATLNDTL 720
Query: 353 RIWD 356
++W+
Sbjct: 721 KLWN 732
Score = 42.4 bits (98), Expect = 4e-04
Identities = 29/95 (30%), Positives = 44/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 234 IKRIRGHCNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLA 290
+K GH N VYC S G+Y++ GS+D V IW ++ + GH + +
Sbjct: 752 LKIYSGHVNRVYCITSTFSVTNGKYIVGGSEDHCVYIWDLQQKL-VQKLEGHTDTVISVT 928
Query: 291 VSSNNALVASS--SNDYIIRVWRLPDGLPISVLRG 323
+AS+ + D +RVW + D IS L G
Sbjct: 929 CHPTENKIASAGLAGDRTVRVW-VQDS*IISKLYG 1030
>TC209542
Length = 1445
Score = 71.2 bits (173), Expect = 8e-13
Identities = 37/137 (27%), Positives = 68/137 (49%)
Frame = +2
Query: 232 QNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAV 291
+ + ++GH V A F+ G YV++ DR +++W+ + + + H ++ D+ V
Sbjct: 17 KEVNVLKGHEGGVLAARFNGDGNYVLSCGKDRTIRLWNPHRGIHIKTYKSHAREVRDVHV 196
Query: 292 SSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 351
+ +N+ + S D I W + G I RGH G V + F+ + V +S+ D +
Sbjct: 197 TQDNSKLCSCGGDRQIFYWDVATGRVIRKFRGHDGEVNGVKFNENSSGV---VSAGYDQS 367
Query: 352 CRIWDARYTHSTPRLYV 368
R WD R +HST + +
Sbjct: 368 LRAWDCR-SHSTEPIQI 415
Score = 57.8 bits (138), Expect = 9e-09
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +2
Query: 244 VYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDI--TDLAVSSNNALVASS 301
V C G ++ G D +++ T L +GH D +++ +A V
Sbjct: 551 VNCVSMSNDGNCILAGCLDSTLRLLDRSTGELLQEYKGHTNKSYKLDCCLTNTDAHVTGV 730
Query: 302 SNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIW 355
S D I W L D +S + HT VT++++ P+ N +++SS DGT R+W
Sbjct: 731 SEDGFIYFWDLVDASVVSRFKAHTSVVTSVSYHPKENC---MVTSSVDGTIRVW 883
Score = 34.3 bits (77), Expect = 0.11
Identities = 20/82 (24%), Positives = 38/82 (45%), Gaps = 4/82 (4%)
Frame = +2
Query: 234 IKRIRGHCNAVY---CAIFDRSGRYVITG-SDDRLVKIWSMETAYSLASCRGHVGDITDL 289
++ +GH N Y C + + +TG S+D + W + A ++ + H +T +
Sbjct: 647 LQEYKGHTNKSYKLDCCLTNTDAH--VTGVSEDGFIYFWDLVDASVVSRFKAHTSVVTSV 820
Query: 290 AVSSNNALVASSSNDYIIRVWR 311
+ + +SS D IRVW+
Sbjct: 821 SYHPKENCMVTSSVDGTIRVWK 886
>TC228794 similar to UP|Q6V8V0 (Q6V8V0) Transducin-like (Fragment), complete
Length = 870
Score = 68.6 bits (166), Expect = 5e-12
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 1/184 (0%)
Frame = +3
Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSME-TAYSLASCRGHVGDITDLAVS 292
I + GH +A+Y F+ +G V +GS DR + +W++ + +GH + DL +
Sbjct: 258 IMLLSGHQSAIYTMKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWT 437
Query: 293 SNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
++ + S+S D +R W + G I + H V + S R + ++S SDDGT
Sbjct: 438 TDGTQIVSASPDKTVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPL--VVSGSDDGTA 611
Query: 353 RIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNL 412
++WD R S T P +QI F+ TG DN
Sbjct: 612 KLWDMRQRGSI--------------------QTFPDKYQITAVGFSDASDKIFTGGIDND 731
Query: 413 ARVY 416
+++
Sbjct: 732 VKIW 743
Score = 47.4 bits (111), Expect = 1e-05
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Frame = +3
Query: 232 QNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAV 291
+N ++GH NAV + G +++ S D+ V+ W +ET + H+ +
Sbjct: 381 KNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTVRAWDVETGKQIKKMVEHLSYVNSCCP 560
Query: 292 SSNN-ALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDG 350
S LV S S+D ++W + I +TA+ FS +A ++ + D
Sbjct: 561 SRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKY-QITAVGFS---DASDKIFTGGIDN 728
Query: 351 TCRIWDAR 358
+IWD R
Sbjct: 729 DVKIWDLR 752
Score = 46.2 bits (108), Expect = 3e-05
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Frame = +3
Query: 228 VQKMQNIKRIRGHCNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDI 286
V+ + IK++ H + V C R V++GSDD K+W M S+ + I
Sbjct: 495 VETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKY-QI 671
Query: 287 TDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSS 346
T + S + + + D +++W L G L+GH +TA+ S P+ Y L +
Sbjct: 672 TAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLS--PDGSYLLTNG 845
Query: 347 SDDGTCRIW 355
D C IW
Sbjct: 846 MDCKLC-IW 869
>TC204561 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1419
Score = 65.5 bits (158), Expect = 4e-11
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 4/181 (2%)
Frame = +1
Query: 240 HCNAVYCAIFDRSGRY--VITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNAL 297
H + V C F S +++ S DR VK+W++ + GH G + +AVS + +L
Sbjct: 586 HSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTNCKLRNTLAGHNGYVNTVAVSPDGSL 765
Query: 298 VASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDA 357
AS D +I +W L +G + L + + A+ FSP Y L ++++ + +IWD
Sbjct: 766 CASGGKDGVILLWDLAEGKRLYSLDAGS-IIHALCFSPNR---YWLCAATEQ-SIKIWDL 930
Query: 358 RYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFN--ANGTVFVTGSSDNLARV 415
L V +++ S G ++N + I+C + N A+G+ +G +D + RV
Sbjct: 931 ESKSIVEDLKVDLKTEADATSGGGNAN---KKKVIYCTSLNWSADGSTLFSGYTDGVVRV 1101
Query: 416 Y 416
+
Sbjct: 1102W 1104
Score = 58.9 bits (141), Expect = 4e-09
Identities = 32/124 (25%), Positives = 62/124 (49%), Gaps = 2/124 (1%)
Frame = +1
Query: 235 KRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSN 294
+R+ GH + V + G++ ++GS D +++W + S GH D+ +A S +
Sbjct: 313 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSID 492
Query: 295 NALVASSSNDYIIRVWRLPDGLPISVLRG--HTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
N + S+S D I++W ++ G H+ V+ + FSP ++S+S D T
Sbjct: 493 NRQIVSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSP-STLQPTIVSASWDRTV 669
Query: 353 RIWD 356
++W+
Sbjct: 670 KVWN 681
>TC229098 similar to PIR|T46032|T46032 WD-40 repeat regulatory protein tup1
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (59%)
Length = 580
Score = 63.5 bits (153), Expect = 2e-10
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Frame = +3
Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
IK + GH N V+C F+ +++GS D V++W +++ L H +T + +
Sbjct: 33 IKTLHGHTNYVFCVNFNPQSNIIVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNR 212
Query: 294 NNALVASSSNDYIIRVWRLPDGLPI-SVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
+ +L+ SSS D + R+W G + +++ V+ + FS PNA + L+ + D+ T
Sbjct: 213 DGSLIVSSSYDGLCRIWDASTGHCMKTLIDDDNPPVSFVKFS--PNAKFILVGTLDN-TL 383
Query: 353 RIWDARYTHSTPRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDN 411
R+W+ STG+ + + + I NG V GS +N
Sbjct: 384 RLWNY----------------STGKFLKTYTGHVNSKYCISSTFSTTNGKYIVGGSEEN 512
Score = 58.5 bits (140), Expect = 5e-09
Identities = 31/96 (32%), Positives = 52/96 (53%)
Frame = +3
Query: 266 KIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHT 325
++W + T + + GH + + + + ++ S S D +RVW + G + VL H+
Sbjct: 3 RLWDVPTGSLIKTLHGHTNYVFCVNFNPQSNIIVSGSFDETVRVWDVKSGKCLKVLPAHS 182
Query: 326 GAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTH 361
VTA+ F+ R ++ ++SSS DG CRIWDA H
Sbjct: 183 DPVTAVDFN-RDGSL--IVSSSYDGLCRIWDASTGH 281
Score = 38.5 bits (88), Expect = 0.006
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +3
Query: 249 FDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGD---ITDLAVSSNNALVASSSNDY 305
F + ++++ G+ D +++W+ T L + GHV I+ ++N + S +
Sbjct: 333 FSPNAKFILVGTLDNTLRLWNYSTGKFLKTYTGHVNSKYCISSTFSTTNGKYIVGGSEEN 512
Query: 306 IIRVWRLPDGLPISVLRGHTGA 327
I +W L + L GH+ A
Sbjct: 513 YIYLWDLQSRKIVQKLEGHSDA 578
Score = 35.4 bits (80), Expect = 0.048
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 234 IKRIRGHCNAVYC---AIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGH 282
+K GH N+ YC +G+Y++ GS++ + +W +++ + GH
Sbjct: 414 LKTYTGHVNSKYCISSTFSTTNGKYIVGGSEENYIYLWDLQSRKIVQKLEGH 569
>TC222379 homologue to UP|Q9HGV7 (Q9HGV7) Gbeta like protein, partial (84%)
Length = 950
Score = 62.8 bits (151), Expect = 3e-10
Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +1
Query: 235 KRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSN 294
+ + GH + V + G Y ++ S D+ +++W + T + GH D+ ++ S++
Sbjct: 16 RSLHGHSHIVSDCVISSDGAYALSSSWDKTLRLWELSTGQTTRRFVGHNNDVLSVSFSAD 195
Query: 295 NALVASSSNDYIIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRP-NAVYQLLSSSDDGTC 352
N + S S D I++W ++ +GHT V+ + FSP P N V ++S+ D
Sbjct: 196 NRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPV--IVSAGWDKFV 369
Query: 353 RIWD 356
++W+
Sbjct: 370 KVWE 381
Score = 49.3 bits (116), Expect = 3e-06
Identities = 30/91 (32%), Positives = 44/91 (47%), Gaps = 4/91 (4%)
Frame = +1
Query: 274 YSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAF 333
Y S GH ++D +SS+ A SSS D +R+W L G GH V +++F
Sbjct: 7 YPKRSLHGHSHIVSDCVISSDGAYALSSSWDKTLRLWELSTGQTTRRFVGHNNDVLSVSF 186
Query: 334 SPRPNAVYQLLSSSDDGTCRIW----DARYT 360
S Q++S S D T ++W D +YT
Sbjct: 187 SADNR---QIVSGSRDRTIKLWNTLGDCKYT 270
Score = 42.0 bits (97), Expect = 5e-04
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +1
Query: 238 RGHCNAVYCAIFDRSGR--YVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNN 295
+GH V C F + + +++ D+ VK+W + T GH G I + +S +
Sbjct: 280 KGHTEWVSCVRFSPNPQNPVIVSAGWDKFVKVWELATCRIQTDHIGHTGYINTVTISPDG 459
Query: 296 ALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSP 335
+L AS D +W L + + L + A+ FSP
Sbjct: 460 SLCASGGKDGTTMLWDLNESKHLYSLTA-GDEIHALVFSP 576
>TC220018 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K8K14 (AT5g67320/K8K14_4),
partial (42%)
Length = 1050
Score = 62.0 bits (149), Expect = 5e-10
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 32/210 (15%)
Frame = +1
Query: 240 HCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVA 299
H ++ +++ G Y++TGS D+ +W ++ H G D+ NN A
Sbjct: 28 HKGPIFSLKWNKKGDYLLTGSCDQTAIVWDVKAEEWKQQFEFHSGPTLDVD-WRNNVSFA 204
Query: 300 SSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR- 358
+SS D +I V ++ + PI GH G V + + P + L S SDD T +IW +
Sbjct: 205 TSSTDNMIHVCKIGETHPIKTFTGHQGEVNCVKWDPTGSL---LASCSDDITAKIWSMKQ 375
Query: 359 --YTHS----TPRLYVPKPSDSTGRSSGPSSNTMPQS----------------------- 389
Y H + +Y + S + ++ P+ + S
Sbjct: 376 DTYLHDLREHSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWDVELGKLIYSLDG 555
Query: 390 --HQIFCCAFNANGTVFVTGSSDNLARVYT 417
H ++ AF+ NG V+GS D +++
Sbjct: 556 HRHPVYSVAFSPNGDYLVSGSLDRSMHIWS 645
Score = 60.5 bits (145), Expect = 1e-09
Identities = 45/134 (33%), Positives = 65/134 (47%), Gaps = 9/134 (6%)
Frame = +1
Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVS- 292
IK GH V C +D +G + + SDD KIWSM+ L R H +I + S
Sbjct: 259 IKTFTGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDTYLHDLREHSKEIYTIRWSP 438
Query: 293 --------SNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLL 344
++ ++AS+S D +++W + G I L GH V ++AFS PN Y L+
Sbjct: 439 TGPGTNNPNHKLVLASASFDSTVKLWDVELGKLIYSLDGHRHPVYSVAFS--PNGDY-LV 609
Query: 345 SSSDDGTCRIWDAR 358
S S D + IW R
Sbjct: 610 SGSLDRSMHIWSLR 651
>TC228488 similar to UP|Q8LF96 (Q8LF96) PRL1 protein, partial (70%)
Length = 1303
Score = 61.2 bits (147), Expect = 8e-10
Identities = 33/123 (26%), Positives = 55/123 (43%)
Frame = +3
Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
+ GH V Y+ + DD+ VK W +E + S GH+ + LA+
Sbjct: 624 LTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTID 803
Query: 297 LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
++ + D + RVW + + I L GH V ++ P Q+++ S D T ++WD
Sbjct: 804 VLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDP---QVVTGSHDTTIKMWD 974
Query: 357 ARY 359
RY
Sbjct: 975 LRY 983
Score = 56.6 bits (135), Expect = 2e-08
Identities = 28/96 (29%), Positives = 45/96 (46%)
Frame = +3
Query: 263 RLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLR 322
R +KIW + + + GH+ + LAVS+ + + S+ +D ++ W L I
Sbjct: 576 RTIKIWDLASGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYH 755
Query: 323 GHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR 358
GH V +A P + LL+ D CR+WD R
Sbjct: 756 GHLSGVYCLALHP---TIDVLLTGGRDSVCRVWDIR 854
Score = 55.1 bits (131), Expect = 6e-08
Identities = 27/106 (25%), Positives = 50/106 (46%)
Frame = +3
Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
I+ GH + VYC + ++TG D + ++W + + + + GH + +
Sbjct: 741 IRSYHGHLSGVYCLALHPTIDVLLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRP 920
Query: 294 NNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNA 339
+ V + S+D I++W L G +S L H +V A+A P+ A
Sbjct: 921 TDPQVVTGSHDTTIKMWDLRYGKTMSTLTNHKKSVRAMAQHPKEQA 1058
Score = 45.4 bits (106), Expect = 5e-05
Identities = 37/135 (27%), Positives = 65/135 (47%), Gaps = 2/135 (1%)
Frame = +3
Query: 230 KMQNIKRIRGHCNAVYCAIFDR-SGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITD 288
KMQ I + GH N V C++F R + V+TGS D +K+W + ++++ H +
Sbjct: 858 KMQ-IHALSGHDNTV-CSVFTRPTDPQVVTGSHDTTIKMWDLRYGKTMSTLTNHKKSVRA 1031
Query: 289 LAVSSNNALVASSSNDYIIRVWRLPDG-LPISVLRGHTGAVTAIAFSPRPNAVYQLLSSS 347
+A AS+S D I+ + LP G ++L + A+A N +++
Sbjct: 1032MAQHPKEQAFASASADN-IKKFNLPKGEFCHNMLSQQKTIINAMAV----NEEGVMVTGG 1196
Query: 348 DDGTCRIWDARYTHS 362
D+G+ WD + H+
Sbjct: 1197DNGSMWFWDWKSGHN 1241
>TC209377 similar to UP|Q9FLX9 (Q9FLX9) Notchless protein homolog
(At5g52820), partial (33%)
Length = 669
Score = 60.5 bits (145), Expect = 1e-09
Identities = 35/120 (29%), Positives = 59/120 (49%)
Frame = +2
Query: 236 RIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNN 295
R+ GH V F G++V + S D+ VK+W+ T + + RGHVG + ++ S+++
Sbjct: 110 RMTGHQQLVNHVYFSPDGQWVASASFDKSVKLWNGTTGKFVTAFRGHVGPVYQISWSADS 289
Query: 296 ALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIW 355
L+ S S D ++VW + L GH V ++ +SP V S D ++W
Sbjct: 290 RLLLSGSKDSTLKVWDIRTRKLKQDLPGHADEVFSVDWSPDGEKV---ASGGKDKVLKLW 460
Score = 47.0 bits (110), Expect = 2e-05
Identities = 32/107 (29%), Positives = 48/107 (43%), Gaps = 13/107 (12%)
Frame = +2
Query: 265 VKIWSMETAYSLASC-------------RGHVGDITDLAVSSNNALVASSSNDYIIRVWR 311
+K WS++ SL S GH + + S + VAS+S D +++W
Sbjct: 32 LKDWSLDLMISLCSLWEPFINKHPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSVKLWN 211
Query: 312 LPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR 358
G ++ RGH G V I++S LLS S D T ++WD R
Sbjct: 212 GTTGKFVTAFRGHVGPVYQISWSADSRL---LLSGSKDSTLKVWDIR 343
Score = 45.8 bits (107), Expect = 4e-05
Identities = 20/77 (25%), Positives = 36/77 (45%)
Frame = +2
Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
+ RGH VY + R +++GS D +K+W + T GH ++ + S
Sbjct: 230 VTAFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTRKLKQDLPGHADEVFSVDWSP 409
Query: 294 NNALVASSSNDYIIRVW 310
+ VAS D ++++W
Sbjct: 410 DGEKVASGGKDKVLKLW 460
>TC226136 similar to UP|O48847 (O48847) Expressed protein
(At2g32700/F24L7.16), partial (42%)
Length = 1463
Score = 60.1 bits (144), Expect = 2e-09
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = +3
Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
IR + V C F G+ + + D+ V +W+MET + ++ H ITD+ N+
Sbjct: 219 IRKSNSKVVCCHFSSDGKLLASAGHDKKVVLWNMETLQTESTPEEHSLIITDVRFRPNST 398
Query: 297 LVASSSNDYIIRVWRLPD-GLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIW 355
+A+SS D +R+W D P+ GHT V ++ F P+ ++ S ++ R W
Sbjct: 399 QLATSSFDTTVRLWDAADPTFPLHTYSGHTSHVVSLDFHPKKTELF--CSCDNNNEIRFW 572
Query: 356 DARYTHST 363
ST
Sbjct: 573 SISQYSST 596
Score = 36.2 bits (82), Expect = 0.028
Identities = 25/128 (19%), Positives = 56/128 (43%)
Frame = +3
Query: 228 VQKMQNIKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDIT 287
V+ + + ++GH V+C +D +G Y+ + S + VK+WS+ + +
Sbjct: 693 VETDRQMHTLQGHSAEVHCVCWDTNGDYLASVSQES-VKVWSLASGECIHELNSSGNMFH 869
Query: 288 DLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSS 347
+ + + + +W + + +++ H ++A+A SP V S+S
Sbjct: 870 SCVFHPSYSTLLVIGGYQSLELWNMAENKCMTI-PAHECVISALAQSPLTGMV---ASAS 1037
Query: 348 DDGTCRIW 355
D + +IW
Sbjct: 1038HDKSVKIW 1061
>TC208379 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K8K14 (AT5g67320/K8K14_4),
partial (42%)
Length = 1062
Score = 59.3 bits (142), Expect = 3e-09
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Frame = +2
Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVS- 292
I+ GH + V C +D +G + + SDD KIWSM+ L R H +I + S
Sbjct: 263 IRTFVGHQSEVNCIKWDPTGSLLASCSDDMTAKIWSMKQDKYLHEFREHSKEIYTIRWSP 442
Query: 293 --------SNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLL 344
+ N ++AS+S D +++W + G + L GH V ++AFS PN Y +
Sbjct: 443 TGPGTNNPNKNLVLASASFDSTVKLWDVELGKLLYSLNGHRDRVYSVAFS--PNGEY-IA 613
Query: 345 SSSDDGTCRIWDAR 358
S S D + IW +
Sbjct: 614 SGSPDRSMLIWSLK 655
Score = 58.2 bits (139), Expect = 7e-09
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 32/210 (15%)
Frame = +2
Query: 240 HCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVA 299
H ++ +++ G Y++TGS D+ +W ++ H G D+ NN A
Sbjct: 32 HKGPIFSLKWNKKGDYILTGSCDQTAIVWDVKAEEWKQQFEFHSGWTLDVDWR-NNVSFA 208
Query: 300 SSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDA-- 357
+SS D I V ++ + LPI GH V I + P + L S SDD T +IW
Sbjct: 209 TSSTDTKIHVCKIGEKLPIRTFVGHQSEVNCIKWDPTGSL---LASCSDDMTAKIWSMKQ 379
Query: 358 -RYTHS----TPRLYVPKPSDSTGRSSGPSSNTMPQS----------------------- 389
+Y H + +Y + S + ++ P+ N + S
Sbjct: 380 DKYLHEFREHSKEIYTIRWSPTGPGTNNPNKNLVLASASFDSTVKLWDVELGKLLYSLNG 559
Query: 390 --HQIFCCAFNANGTVFVTGSSDNLARVYT 417
+++ AF+ NG +GS D +++
Sbjct: 560 HRDRVYSVAFSPNGEYIASGSPDRSMLIWS 649
Score = 42.0 bits (97), Expect = 5e-04
Identities = 22/69 (31%), Positives = 32/69 (45%)
Frame = +2
Query: 258 TGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLP 317
+ S D VK+W +E L S GH + +A S N +AS S D + +W L +G
Sbjct: 488 SASFDSTVKLWDVELGKLLYSLNGHRDRVYSVAFSPNGEYIASGSPDRSMLIWSLKEGKI 667
Query: 318 ISVLRGHTG 326
+ G G
Sbjct: 668 VKTYTGDGG 694
Score = 36.6 bits (83), Expect = 0.022
Identities = 16/48 (33%), Positives = 26/48 (53%)
Frame = +2
Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVG 284
+ GH + VY F +G Y+ +GS DR + IWS++ + + G G
Sbjct: 551 LNGHRDRVYSVAFSPNGEYIASGSPDRSMLIWSLKEGKIVKTYTGDGG 694
>TC205059 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1492
Score = 58.9 bits (141), Expect = 4e-09
Identities = 32/124 (25%), Positives = 62/124 (49%), Gaps = 2/124 (1%)
Frame = +2
Query: 235 KRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSN 294
+R+ GH + V + G++ ++GS D +++W + S GH D+ +A S +
Sbjct: 389 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSID 568
Query: 295 NALVASSSNDYIIRVWRLPDGLPISVLRG--HTGAVTAIAFSPRPNAVYQLLSSSDDGTC 352
N + S+S D I++W ++ G H+ V+ + FSP ++S+S D T
Sbjct: 569 NRQIVSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSP-STLQPTIVSASWDRTV 745
Query: 353 RIWD 356
++W+
Sbjct: 746 KVWN 757
Score = 51.2 bits (121), Expect = 8e-07
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Frame = +2
Query: 240 HCNAVYCAIFDRSGRY--VITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNAL 297
H + V C F S +++ S DR VK+W++ + GH G + +AVS + +L
Sbjct: 662 HSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTNCKLRNTLAGHNGYVNTVAVSPDGSL 841
Query: 298 VASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDA 357
AS D +I +W L +G + L + + A+ FSP Y L ++++ + +IWD
Sbjct: 842 CASGGKDGVILLWDLAEGKRLYSLDAGS-IIHALCFSPNR---YWLCAATEQ-SIKIWDL 1006
Query: 358 RYTHSTPRLYVPKPSDSTGRSSG 380
L V +++ + G
Sbjct: 1007ESKSIVEDLKVDLKTEADATTGG 1075
>TC228588 similar to UP|Q6NLV4 (Q6NLV4) At5g13480, partial (29%)
Length = 1178
Score = 57.8 bits (138), Expect = 9e-09
Identities = 38/119 (31%), Positives = 57/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 239 GHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS-NNAL 297
GH N V C ++++G +V+T S D+++K++ + L S RGH D+T LA +
Sbjct: 7 GHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTTLAWHPFHEEY 186
Query: 298 VASSSNDYIIRVWRLPDGLP-ISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIW 355
S S D I W + P I + H V +A+ P Y L S S D T + W
Sbjct: 187 FVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAWHP---IGYLLCSGSSDHTTKFW 354
>BI784574 similar to GP|16323188|gb AT5g67320/K8K14_4 {Arabidopsis thaliana},
partial (22%)
Length = 426
Score = 57.8 bits (138), Expect = 9e-09
Identities = 34/119 (28%), Positives = 57/119 (47%)
Frame = +2
Query: 240 HCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVA 299
H ++ +++ G Y+++GS D+ +W+++T H G D+ NN A
Sbjct: 23 HRGPIFSLKWNKKGDYLLSGSVDKTAIVWNIKTGEWKQLFEFHTGPTLDVD-WRNNVSFA 199
Query: 300 SSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDAR 358
+ S D +I V ++ + PI GH V AI + P + L S SDD T +IW +
Sbjct: 200 TCSTDKMIHVCKIGENRPIKTFSGHQDEVNAIKWDPSGSL---LASCSDDHTAKIWSLK 367
Score = 34.3 bits (77), Expect = 0.11
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDI 286
IK GH + V +D SG + + SDD KIWS++ L + + HV I
Sbjct: 254 IKTFSGHQDEVNAIKWDPSGSLLASCSDDHTAKIWSLKQDNFLHNLKEHVKGI 412
Score = 31.2 bits (69), Expect = 0.90
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +2
Query: 258 TGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLP 317
T S D+++ + + + + GH ++ + + +L+AS S+D+ ++W L
Sbjct: 200 TCSTDKMIHVCKIGENRPIKTFSGHQDEVNAIKWDPSGSLLASCSDDHTAKIWSLKQDNF 379
Query: 318 ISVLRGHTGAVTAI 331
+ L+ H + I
Sbjct: 380 LHNLKEHVKGIYTI 421
>TC207353 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat protein 5,
partial (58%)
Length = 898
Score = 57.0 bits (136), Expect = 2e-08
Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +3
Query: 244 VYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSN 303
V+C F+ Y+++GS D +K+W ++T + + +GH +T + + + L+ S+S+
Sbjct: 3 VFCVNFNPQSSYIVSGSFDETIKVWDVKTGKCVHTIKGHTMPVTSVHYNRDGTLIISASH 182
Query: 304 DYIIRVWRLPDG-LPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
D ++W G L +++ AV+ FS PN + L ++ +D T ++W+
Sbjct: 183 DGSCKIWDTGTGNLLKTLIEDKAPAVSFAKFS--PNGKFILAATLND-TLKLWN 335
Score = 51.2 bits (121), Expect = 8e-07
Identities = 32/119 (26%), Positives = 55/119 (45%), Gaps = 5/119 (4%)
Frame = +3
Query: 234 IKRIRGHCNAVYCAIFDRS---GRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLA 290
+K GH N VYC S GRY+++GS+DR V IW ++ + GH + +
Sbjct: 354 LKIYSGHVNRVYCITSTFSVTNGRYIVSGSEDRCVYIWDLQAKNMIQKLEGHTDTVISVT 533
Query: 291 VSSNNALVASS--SNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSS 347
+AS+ + D +RVW + +L+ + G V F+ P + +L ++
Sbjct: 534 CHPTENKIASAGLAGDRTVRVWVQDS*I---ILKLYGGVVLLQNFNCTPMRLISILDTT 701
Score = 45.4 bits (106), Expect = 5e-05
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Frame = +3
Query: 234 IKRIRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSS 293
+ I+GH V ++R G +I+ S D KIW T L + A S
Sbjct: 99 VHTIKGHTMPVTSVHYNRDGTLIISASHDGSCKIWDTGTGNLLKTLIEDKAPAVSFAKFS 278
Query: 294 NNA--LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 351
N ++A++ ND +++W G + + GH V I + ++S S+D
Sbjct: 279 PNGKFILAATLND-TLKLWNYGSGKFLKIYSGHVNRVYCITSTFSVTNGRYIVSGSEDRC 455
Query: 352 CRIWDARYTHSTPRL 366
IWD + + +L
Sbjct: 456 VYIWDLQAKNMIQKL 500
>TC221163
Length = 832
Score = 56.6 bits (135), Expect = 2e-08
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 239 GHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRG---HVGDITDLAVSSNN 295
GH ++V C F G+ + TGSDD ++IW+ +T S RG H +T L ++S +
Sbjct: 63 GHGDSVTCGDFTPDGKIICTGSDDATLRIWNPKTGESTHVVRGHPYHTEGLTCLTINSTS 242
Query: 296 ALVASSSNDYIIRVWRLPDGLPI--SVLRGHTGAVTAIAFSP 335
L S S D + + + G + + L H+ ++ + F+P
Sbjct: 243 TLALSGSKDGSVHIVNITTGRVVDNNALASHSDSIECVGFAP 368
Score = 50.4 bits (119), Expect = 1e-06
Identities = 34/115 (29%), Positives = 56/115 (48%)
Frame = +3
Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
+ H +++ C F SG + G D+ + IW +E +C H +T LA +
Sbjct: 324 LASHSDSIECVGFAPSGSWAAVGGMDKKLIIWDIEHLLPRGTCE-HEDGVTCLAWLGAS- 497
Query: 297 LVASSSNDYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGT 351
VAS D +R+W G + L+GH+ A+ +++ S N L+S+S DGT
Sbjct: 498 YVASGCVDGKVRLWDSRSGECVKTLKGHSDAIQSLSVSSNRN---YLVSASVDGT 653
Score = 38.5 bits (88), Expect = 0.006
Identities = 28/112 (25%), Positives = 46/112 (41%)
Frame = +3
Query: 304 DYIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHST 363
D+ I +W + ++ GH +VT F+P + + SDD T RIW+
Sbjct: 6 DFSIWMWNTDNAALLNTFIGHGDSVTCGDFTPDGKII---CTGSDDATLRIWN------- 155
Query: 364 PRLYVPKPSDSTGRSSGPSSNTMPQSHQIFCCAFNANGTVFVTGSSDNLARV 415
PK +ST G +T + C N+ T+ ++GS D +
Sbjct: 156 -----PKTGESTHVVRGHPYHT----EGLTCLTINSTSTLALSGSKDGSVHI 284
Score = 37.0 bits (84), Expect = 0.016
Identities = 24/97 (24%), Positives = 44/97 (44%), Gaps = 3/97 (3%)
Frame = +3
Query: 261 DDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIRVWRLPDGLPISV 320
+D + +W+ + A L + GH +T + + ++ + S+D +R+W G V
Sbjct: 3 EDFSIWMWNTDNAALLNTFIGHGDSVTCGDFTPDGKIICTGSDDATLRIWNPKTGESTHV 182
Query: 321 LRG---HTGAVTAIAFSPRPNAVYQLLSSSDDGTCRI 354
+RG HT +T + + LS S DG+ I
Sbjct: 183 VRGHPYHTEGLTCLTINSTSTLA---LSGSKDGSVHI 284
>TC223729 similar to UP|Q9XI24 (Q9XI24) F9L1.40 protein, partial (15%)
Length = 408
Score = 55.8 bits (133), Expect = 3e-08
Identities = 35/108 (32%), Positives = 49/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 250 DRSGRYVITGSDDRL-VKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSNDYIIR 308
D SG + G+ D V +WSM+T + GH + L S N ++ASSS D +R
Sbjct: 67 DISGEVICAGTSDSFEVFVWSMKTGRLMDVLSGHEAPVHGLVFSPTNTVLASSSYDKTVR 246
Query: 309 VWRLPDGLPISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWD 356
+W + DG HT V + + P QL S+ DG WD
Sbjct: 247 LWNVFDGKGAVETFPHTHDVLTVVYRPDGR---QLACSTLDGQIHFWD 381
Score = 31.6 bits (70), Expect = 0.69
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +1
Query: 237 IRGHCNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNA 296
+ GH V+ +F + + + S D+ V++W++ H D+ + +
Sbjct: 157 LSGHEAPVHGLVFSPTNTVLASSSYDKTVRLWNVFDGKGAVETFPHTHDVLTVVYRPDGR 336
Query: 297 LVASSSNDYIIRVWRLPDGL 316
+A S+ D I W DGL
Sbjct: 337 QLACSTLDGQIHFWDPIDGL 396
>TC216518 weakly similar to UP|Q9LW87 (Q9LW87) Coatomer protein complex, beta
prime; beta'-COP protein, partial (29%)
Length = 1189
Score = 55.5 bits (132), Expect = 4e-08
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Frame = +1
Query: 219 YAIAKPSTMVQKMQNIKR-------IRGHCNAVYCAIFD-RSGRYVITGSDDRLVKIWSM 270
Y I+ V K+ N ++ GH + V F+ + + S D +KIWS+
Sbjct: 388 YVISASDDQVLKLWNWRKGWSCYENFEGHSHYVMQVAFNPKDPSTFASASLDGTLKIWSL 567
Query: 271 ETAYSLASCRGHVGDIT--DLAVSSNNALVASSSNDYIIRVWRLPDGLPISVLRGHTGAV 328
+++ + GH + D ++++ + S S+DY +VW + L GH V
Sbjct: 568 DSSAPNFTLEGHQKGVNCVDYFITNDKQYLLSGSDDYTAKVWDYHSRNCVQTLEGHENNV 747
Query: 329 TAIAFSPRPNAVYQLLSSSDDGTCRIWDA 357
TAI P + ++++S+D T +IWDA
Sbjct: 748 TAICAHPE---LPIIITASEDSTVKIWDA 825
Score = 47.0 bits (110), Expect = 2e-05
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Frame = +1
Query: 244 VYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHVGDITDLAVSSNNALVASSSN 303
V A F +++ +DD+ + +++ + + H I LAV V S+S+
Sbjct: 229 VRSAKFIARENWIVAATDDKNIHVYNYDKMEKIVEFAEHKDYIRSLAVHPVLPYVISASD 408
Query: 304 DYIIRVWRLPDGLP-ISVLRGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIW 355
D ++++W G GH+ V +AF+P+ + + S+S DGT +IW
Sbjct: 409 DQVLKLWNWRKGWSCYENFEGHSHYVMQVAFNPKDPSTF--ASASLDGTLKIW 561
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.134 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,466,942
Number of Sequences: 63676
Number of extensions: 377464
Number of successful extensions: 2380
Number of sequences better than 10.0: 166
Number of HSP's better than 10.0 without gapping: 2101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2286
length of query: 417
length of database: 12,639,632
effective HSP length: 100
effective length of query: 317
effective length of database: 6,272,032
effective search space: 1988234144
effective search space used: 1988234144
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC144539.12