TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144515.17 - phase: 0 /pseudo
         (58 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC205797 similar to UP|Q9SW27 (Q9SW27) Geranylgeranylated protei...    25  6.3
TC217513 similar to UP|Q93VV0 (Q93VV0) AT3g09320/F3L24_19, parti...    25  6.3
TC217809 beta-1,3-glucanase 7                                          25  8.2
BU926951 similar to GP|14030661|gb| AT5g57930/MTI20_19 {Arabidop...    25  8.2

>TC205797 similar to UP|Q9SW27 (Q9SW27) Geranylgeranylated protein ATGP4
           (At4g24990), complete
          Length = 952

 Score = 25.4 bits (54), Expect = 6.3
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 34  YQLLQIMCVLDPSCMIHMFIMNCK 57
           + +++ +C LD   +IH  +MNC+
Sbjct: 656 FHIVKRVCELDMRILIHQSLMNCR 727


>TC217513 similar to UP|Q93VV0 (Q93VV0) AT3g09320/F3L24_19, partial (48%)
          Length = 1166

 Score = 25.4 bits (54), Expect = 6.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 39   IMCVLDPSCMIHMFI 53
            I C+LD  C+IH FI
Sbjct: 1095 IFCILDNICIIHFFI 1139


>TC217809 beta-1,3-glucanase 7
          Length = 1867

 Score = 25.0 bits (53), Expect = 8.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 43   LDPSCMIHMFIMNCKQ 58
            LDP  ++H+F+ NC Q
Sbjct: 1510 LDPYQLLHLFLQNCTQ 1463


>BU926951 similar to GP|14030661|gb| AT5g57930/MTI20_19 {Arabidopsis
           thaliana}, partial (11%)
          Length = 445

 Score = 25.0 bits (53), Expect = 8.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 24  VHRNHTRPRRYQLLQIMCVLDPSCMIHMFIMNCK 57
           +HR+H      QLLQI+   DPS +IH+     K
Sbjct: 425 MHRHHFE----QLLQIVDQSDPSSIIHIICSRYK 336


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.334    0.142    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,216,555
Number of Sequences: 63676
Number of extensions: 40666
Number of successful extensions: 379
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of query: 58
length of database: 12,639,632
effective HSP length: 34
effective length of query: 24
effective length of database: 10,474,648
effective search space: 251391552
effective search space used: 251391552
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 52 (24.6 bits)