BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144515.13 + phase: 0
(381 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC214889 homologue to PIR|C86216|C86216 protein T23G18.6 [import... 605 e-174
TC214890 homologue to PIR|C86216|C86216 protein T23G18.6 [import... 602 e-173
TC214891 homologue to PIR|C86216|C86216 protein T23G18.6 [import... 415 e-116
TC214888 homologue to PIR|C86216|C86216 protein T23G18.6 [import... 228 3e-60
BE059735 homologue to PIR|C86216|C86 protein T23G18.6 [imported]... 226 1e-59
BE475462 177 7e-45
BG157327 121 5e-28
TC216251 homologue to UP|Q9SMJ5 (Q9SMJ5) DTDP-glucose 4-6-dehydr... 109 2e-24
TC214784 similar to UP|Q9LZI2 (Q9LZI2) DTDP-glucose 4-6-dehydrat... 99 2e-21
TC204029 homologue to UP|Q8VZC0 (Q8VZC0) DTDP-glucose 4-6-dehydr... 93 2e-19
BQ785143 80 2e-15
BM086311 homologue to PIR|T00419|T00 dTDP-glucose 4-6-dehydratas... 66 2e-11
TC230614 similar to UP|O24465 (O24465) Thymidine diphospho-gluco... 65 4e-11
TC218271 homologue to UP|Q9AV98 (Q9AV98) UDP-D-glucuronate carbo... 65 5e-11
AW734184 64 1e-10
BG239527 63 3e-10
TC224872 homologue to UP|Q93VR3 (Q93VR3) AT5g28840/F7P1_20, part... 61 7e-10
TC218272 homologue to UP|Q9SMJ5 (Q9SMJ5) DTDP-glucose 4-6-dehydr... 59 5e-09
TC216254 homologue to UP|Q9AV98 (Q9AV98) UDP-D-glucuronate carbo... 57 1e-08
TC210161 UP|Q9SDZ2 (Q9SDZ2) 2'-hydroxy isoflavone/dihydroflavono... 56 3e-08
>TC214889 homologue to PIR|C86216|C86216 protein T23G18.6 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(97%)
Length = 1671
Score = 605 bits (1561), Expect = e-174
Identities = 287/384 (74%), Positives = 338/384 (87%), Gaps = 5/384 (1%)
Frame = +3
Query: 1 MDRVNLDGKPIVPISICLIGGGGFIGSHLTEKLMSETSHKAIVIDVSSEKVNHLL---DK 57
M RV+LDG PI P++IC+IG GGFIGSHL EKLMSET H + +DV S+K+ HLL D
Sbjct: 66 MARVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETPHTVLALDVYSDKIKHLLEPADS 245
Query: 58 SHPWANRIEFHQMNIKNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIP 117
PWA RI FH++NIK+DSRLE L+K +DLTINLAAICTPADYNTRPLDTIYSNFIDA+P
Sbjct: 246 PLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 425
Query: 118 VIKFCTENNKRLIHFSTCEVFGKTIGSFLPEE--YRKEPQYYKLKEDVSPCIFGPVHKQR 175
V+K+C+ENNKRLIHFSTCEV+GKTIG+FLP++ RK+P YY LKED SPCIFG + KQR
Sbjct: 426 VVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQR 605
Query: 176 WSYACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSN 235
WSYACAKQ+ +RLI+AE AENGL+FTIVRP+NWIGPRMDFIPG+DGPS+GVPRVLACFSN
Sbjct: 606 WSYACAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 785
Query: 236 NLLRGEPLKLVDGGHSQRTFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLA 295
NLLRGEPLKLVDGG SQRTF+YIKDAIEAV+LMI+NP RANGHIFNVGNP+NEV+V+QLA
Sbjct: 786 NLLRGEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLA 965
Query: 296 ELMIKVYAKVAGVPESSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDD 355
E+MI+VY+KV+G + T+DVSS+ FYG+GYDDSD+RIPDMTII KQLGW PKTSL D
Sbjct: 966 EIMIQVYSKVSGEQTAETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWD 1145
Query: 356 LLDSTLQYQHQTYSHAIKKELSKP 379
LL+STL YQH+TY+ A+KK ++KP
Sbjct: 1146LLESTLTYQHRTYAEAVKKVIAKP 1217
>TC214890 homologue to PIR|C86216|C86216 protein T23G18.6 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(98%)
Length = 1567
Score = 602 bits (1553), Expect = e-173
Identities = 284/380 (74%), Positives = 338/380 (88%), Gaps = 3/380 (0%)
Frame = +3
Query: 3 RVNLDGKPIVPISICLIGGGGFIGSHLTEKLMSETSHKAIVIDVSSEKVNHLLDK-SHPW 61
RV+LDG PI PI+IC+IG GGFIGSHL EKLMSET H + +DV ++K+ HLL+ + PW
Sbjct: 33 RVDLDGNPIKPITICMIGAGGFIGSHLCEKLMSETPHSVLALDVYNDKIKHLLEPHTLPW 212
Query: 62 ANRIEFHQMNIKNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKF 121
A+RI+FH++NIK+DSRLE L+K SDLTINLAAICTPADYNTRPLDTIYSNFIDA+PV+K+
Sbjct: 213 ASRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 392
Query: 122 CTENNKRLIHFSTCEVFGKTIGSFLPEE--YRKEPQYYKLKEDVSPCIFGPVHKQRWSYA 179
C+ENNKRLIHFSTCEV+GKTIGSFLP++ R++P YY LKED SPCIFG + KQRWSYA
Sbjct: 393 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRWSYA 572
Query: 180 CAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLR 239
CAKQ+ +RL+YAE AENGL+FTIVRP+NWIGPRMDFIPG+DGPS+GVPRVLACFSNNLLR
Sbjct: 573 CAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 752
Query: 240 GEPLKLVDGGHSQRTFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMI 299
GEPLKLVDGG SQRTF+YIKDAIEAV+LMI+NP RANGHIFNVGNP+NEV+V+QLAE+M
Sbjct: 753 GEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMT 932
Query: 300 KVYAKVAGVPESSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDDLLDS 359
+VY+KV+G T+DVSS+ FYG+GYDDSD+RIPDMTII +QLGW PKTSL DLL+S
Sbjct: 933 QVYSKVSGEAPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLES 1112
Query: 360 TLQYQHQTYSHAIKKELSKP 379
TL YQH+TY+ A+KK ++KP
Sbjct: 1113TLTYQHRTYAEAVKKVIAKP 1172
>TC214891 homologue to PIR|C86216|C86216 protein T23G18.6 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(66%)
Length = 1257
Score = 415 bits (1066), Expect = e-116
Identities = 196/254 (77%), Positives = 228/254 (89%), Gaps = 2/254 (0%)
Frame = +3
Query: 128 RLIHFSTCEVFGKTIGSFLPEE--YRKEPQYYKLKEDVSPCIFGPVHKQRWSYACAKQMT 185
RLIHFSTCEV+GKTIG+FLP++ RK+P YY LKED SPCIFG + KQRWSYACAKQ+
Sbjct: 3 RLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLI 182
Query: 186 DRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKL 245
+RLIYAE AENGL+FTIVRP+NWIGPRMDFIPG+DGPS+GVPRVLACFSNNLLRGEPLKL
Sbjct: 183 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKL 362
Query: 246 VDGGHSQRTFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMIKVYAKV 305
VDGG SQRTF+YIKDAIEAV+LMI+NP RANGHIFNVGNP+NEV+V+QLAE+MIKVY+KV
Sbjct: 363 VDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEIMIKVYSKV 542
Query: 306 AGVPESSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDDLLDSTLQYQH 365
+G T+DVSS+ FYG+GYDDSD+RIPDMTII +QLGW PKTSL DLL+STL YQH
Sbjct: 543 SGEQTPETPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQH 722
Query: 366 QTYSHAIKKELSKP 379
+TY+ A+KK ++KP
Sbjct: 723 RTYAEAVKKVIAKP 764
>TC214888 homologue to PIR|C86216|C86216 protein T23G18.6 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(37%)
Length = 545
Score = 228 bits (582), Expect = 3e-60
Identities = 113/173 (65%), Positives = 137/173 (78%), Gaps = 5/173 (2%)
Frame = +3
Query: 1 MDRVNLDGKPIVPISICLIGGGGFIGSHLTEKLMSETSHKAIVIDVSSEKVNHLLDKSH- 59
M RV+LDG P+ ++IC+IG GGFIGSHL EKLMSET H + +DV ++K+ HLL+ S
Sbjct: 27 MARVDLDGNPMKALTICMIGAGGFIGSHLCEKLMSETPHTVLALDVYNDKIKHLLEPSDS 206
Query: 60 PWANRIEFHQMNIKNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVI 119
PWA RI FH++NIK+DSRLE L+K +DLTINLAAICTPADYNTRPLDTIYSNFIDA+PV+
Sbjct: 207 PWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 386
Query: 120 KFCTENNKRLIHFSTCEVFGKTIGSFLP---EEYRKEPQYYKLKEDVS-PCIF 168
K+C+ENNKRLIHFSTCEV+GKTIG+ P + Y LKE S PC+F
Sbjct: 387 KYCSENNKRLIHFSTCEVYGKTIGALSP*R*AYS*RSRHTYVLKEGQSLPCLF 545
>BE059735 homologue to PIR|C86216|C86 protein T23G18.6 [imported] -
Arabidopsis thaliana, partial (37%)
Length = 440
Score = 226 bits (577), Expect = 1e-59
Identities = 115/175 (65%), Positives = 131/175 (74%)
Frame = +2
Query: 181 AKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRG 240
AKQ+ +RLI+AE AENGL+FTIVRP+NWIGPRMDFIPG+DGPS+GVPRVLACFSNNLLRG
Sbjct: 8 AKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRG 187
Query: 241 EPLKLVDGGHSQRTFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMIK 300
EPLKLVDGG SQRTF+YIKDAIEAV+LMI
Sbjct: 188 EPLKLVDGGQSQRTFIYIKDAIEAVLLMI------------------------------- 274
Query: 301 VYAKVAGVPESSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDD 355
VY+KV+G + T+DVSS+ FYG+GYDDSD+RIPDMTII KQLGW PKTSL D
Sbjct: 275 VYSKVSGEQTAETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWD 439
>BE475462
Length = 497
Score = 177 bits (449), Expect = 7e-45
Identities = 89/165 (53%), Positives = 118/165 (70%), Gaps = 3/165 (1%)
Frame = +2
Query: 4 VNLDGKPIVPISICLIGGGGFIGSHLTEKLMSETSHKAIVIDVSSEKVNHLLDKSH-PWA 62
V+LD P+ ++IC+I FI SHL + LMS+T H + +D+ ++K+ HLL S+ P
Sbjct: 2 VDLDRNPMKALTICMISTNSFISSHLYKXLMSKTPHTILALDIYNDKIKHLLKPSNSP*T 181
Query: 63 NRIEFHQMNIKNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKFC 122
N I FH +NIK++S L++L+K +DLTINL I TP +YNTRPL+TIY NFIDA+PVIK+
Sbjct: 182 NHITFHHLNIKHNSHLKSLIKITDLTINLTTIYTPTNYNTRPLNTIYXNFIDALPVIKYY 361
Query: 123 TENNKRLIHFSTCEVFGKTIGSFLPEE--YRKEPQYYKLKEDVSP 165
ENNK LIHFST V+ KTI LP++ RK+P YY LKED SP
Sbjct: 362 AENNKHLIHFSTYXVYQKTIRXCLPKDSPVRKDPAYYVLKEDDSP 496
>BG157327
Length = 331
Score = 121 bits (304), Expect = 5e-28
Identities = 63/88 (71%), Positives = 70/88 (78%)
Frame = -1
Query: 187 RLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLV 246
RL+YAE E+GL FTIVR IGPRMD IPG+D PS+GVPRVLACFSN+LLR EPL LV
Sbjct: 322 RLVYAEGPEHGL*FTIVRHVIVIGPRMDLIPGIDDPSEGVPRVLACFSNSLLRDEPLTLV 143
Query: 247 DGGHSQRTFLYIKDAIEAVMLMIDNPDR 274
DGG SQRT +YIKDAI AV MI NP +
Sbjct: 142 DGGLSQRTSVYIKDAIYAVSSMIINPSQ 59
>TC216251 homologue to UP|Q9SMJ5 (Q9SMJ5) DTDP-glucose 4-6-dehydratase ,
partial (98%)
Length = 1378
Score = 109 bits (273), Expect = 2e-24
Identities = 95/342 (27%), Positives = 157/342 (45%), Gaps = 2/342 (0%)
Frame = +1
Query: 16 ICLIGGGGFIGSHLTEKLMSETSHKAIVID--VSSEKVNHLLDKSHPWANRIEFHQMNIK 73
I + GG GFIGSHL ++LM ++ IV D + K N HP R E + ++
Sbjct: 175 ILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHP---RFELIRHDV- 342
Query: 74 NDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKFCTENNKRLIHFS 133
E L+ D +LA +P Y P+ TI +N I + ++ R++ S
Sbjct: 343 ----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 510
Query: 134 TCEVFGKTIGSFLPEEYRKEPQYYKLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEH 193
T EV+G + PE Y +V+P R Y K++ + L++ H
Sbjct: 511 TSEVYGDPLVHPQPESY---------WGNVNPI------GVRSCYDEGKRVAETLMFDYH 645
Query: 194 AENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGHSQR 253
++G++ I R +N GPRM+ G RV++ F LRGEPL + G R
Sbjct: 646 RQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEPLTVQCPGTQTR 798
Query: 254 TFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMIKVYAKVAGVPESSL 313
+F Y+ D ++ ++ +++ +N N+GNP E ++ +LAE + ++ P +
Sbjct: 799 SFCYVSDLVDGLIRLMEG---SNTGPINLGNP-GEFTMTELAETVKELIN-----PGVEI 951
Query: 314 STLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDD 355
++ + DD +R PD+T + LGW+PK L D
Sbjct: 952 KMVENTP--------DDPRQRKPDITKAKELLGWEPKVKLRD 1053
>TC214784 similar to UP|Q9LZI2 (Q9LZI2) DTDP-glucose 4-6-dehydratase homolog
D18 (At3g62830/F26K9_260), partial (84%)
Length = 1652
Score = 99.4 bits (246), Expect = 2e-21
Identities = 88/344 (25%), Positives = 154/344 (44%), Gaps = 4/344 (1%)
Frame = +3
Query: 14 ISICLIGGGGFIGSHLTEKLMSETSHKAIVIDVSSEKVNHLLDKSHPWAN-RIEFHQMNI 72
+ I + GG GF+GSHL ++L++ +V + + + +++ H + N R E + ++
Sbjct: 375 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPRFELIRHDV 545
Query: 73 KNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKFCTENNKRLIHF 132
+E L+ D +LA +P Y P+ TI +N + + ++ R +
Sbjct: 546 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 710
Query: 133 STCEVFGKTIGSFLPEEYRKEPQYYKLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAE 192
ST EV+G + + PQ +V+P R Y K+ + L
Sbjct: 711 STSEVYGDPL---------QHPQKETYWGNVNPI------GVRSCYDEGKRTAETLTMDY 845
Query: 193 HAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGHSQ 252
H G++ I R +N GPRM G RV++ F LR EPL + G
Sbjct: 846 HRGAGVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQALRKEPLTVYGDGKQT 998
Query: 253 RTFLYIKDAIEAVMLMIDNPDRANGHI--FNVGNPDNEVSVKQLAELMIKVYAKVAGVPE 310
R+F Y+ D +E ++ +++ H+ FN+GNP E ++ +LA+++ +
Sbjct: 999 RSFQYVSDLVEGLIRLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQE---------- 1130
Query: 311 SSLSTLDVSSEVFYGKGY-DDSDRRIPDMTIITKQLGWKPKTSL 353
T+D + + Y DD +R PD++ QLGW+PK L
Sbjct: 1131----TIDPDARIEYRPNTEDDPHKRKPDISRAKDQLGWEPKVDL 1250
>TC204029 homologue to UP|Q8VZC0 (Q8VZC0) DTDP-glucose 4-6-dehydratase-like
protein, partial (92%)
Length = 1640
Score = 93.2 bits (230), Expect = 2e-19
Identities = 85/342 (24%), Positives = 155/342 (44%), Gaps = 4/342 (1%)
Frame = +2
Query: 16 ICLIGGGGFIGSHLTEKLMSETSHKAIVIDVSSEKVNHLLDKSHPWAN-RIEFHQMNIKN 74
I + GG GF+GSHL +KL++ ++ + + + +L+ H + N R E + ++
Sbjct: 413 IVVTGGAGFVGSHLVDKLIARGDDVIVIDNFFTGRKENLV---HLFGNPRFELIRHDV-- 577
Query: 75 DSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKFCTENNKRLIHFST 134
+E ++ D +LA +P Y P+ TI +N + + ++ R + ST
Sbjct: 578 ---VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRIGARFLLTST 748
Query: 135 CEVFGKTIGSFLPEEYRKEPQYYKLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHA 194
EV+G P E+ ++ Y+ +V+P +R Y K+ + L H
Sbjct: 749 SEVYGD------PLEHPQKETYW---GNVNPI------GERSCYDEGKRTAETLAMDYHR 883
Query: 195 ENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGHSQRT 254
G++ I R +N GPRM G RV++ F +R +PL + G R+
Sbjct: 884 GAGVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQAIRKQPLTVYGDGKQTRS 1036
Query: 255 FLYIKDAIEAVMLMIDNPDRANGHI--FNVGNPDNEVSVKQLAELMIKVYAKVAGVPESS 312
F Y+ D + ++ ++++ H+ FN+GNP E ++ +LA+++
Sbjct: 1037FQYVSDLVNGLVALMESE-----HVGPFNLGNP-GEFTMLELAQVV-------------- 1156
Query: 313 LSTLDVSSEVFYGKG-YDDSDRRIPDMTIITKQLGWKPKTSL 353
T+D S+ + Y DD R PD++ + L W+PK L
Sbjct: 1157KETIDSSATIEYKPNTADDPHMRKPDISKAKELLNWEPKIPL 1282
>BQ785143
Length = 421
Score = 79.7 bits (195), Expect = 2e-15
Identities = 47/100 (47%), Positives = 55/100 (55%), Gaps = 42/100 (42%)
Frame = +1
Query: 244 KLVDGGHSQRTFLYIKDAIEAVMLMI---------------------------------- 269
KLVDGG SQRTF+YIKDAIEAV+LMI
Sbjct: 1 KLVDGGQSQRTFVYIKDAIEAVLLMIVGSHIQSFYATLYILSSDCRISSLNYYSCWMVQL 180
Query: 270 --------DNPDRANGHIFNVGNPDNEVSVKQLAELMIKV 301
+NP RANGHIFNVGNP+NEV+V+QLAE+M +V
Sbjct: 181 NVNDNF*QENPARANGHIFNVGNPNNEVTVRQLAEMMTQV 300
>BM086311 homologue to PIR|T00419|T00 dTDP-glucose 4-6-dehydratase homolog
At2g47650 - Arabidopsis thaliana, partial (32%)
Length = 427
Score = 66.2 bits (160), Expect = 2e-11
Identities = 49/164 (29%), Positives = 80/164 (47%), Gaps = 3/164 (1%)
Frame = +2
Query: 193 HAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGHSQ 252
H G++ I R +N GPRM G RV++ F LR EPL + G
Sbjct: 20 HRGAGVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQALRKEPLTVYGDGKQT 172
Query: 253 RTFLYIKDAIEAVMLMIDNPDRANGHI--FNVGNPDNEVSVKQLAELMIKVYAKVAGVPE 310
R+F Y+ D +E +M +++ H+ FN+GNP E ++ +LA+++ +
Sbjct: 173 RSFQYVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQE---------- 304
Query: 311 SSLSTLDVSSEVFYGKGY-DDSDRRIPDMTIITKQLGWKPKTSL 353
T+D +++ Y DD +R PD++ +QLGW+PK L
Sbjct: 305 ----TIDPEAKIEYRPNTEDDPHKRKPDISRAKEQLGWEPKVDL 424
>TC230614 similar to UP|O24465 (O24465) Thymidine diphospho-glucose
4-6-dehydratase homolog (Fragment), partial (75%)
Length = 886
Score = 65.5 bits (158), Expect = 4e-11
Identities = 48/181 (26%), Positives = 88/181 (48%)
Frame = +1
Query: 175 RWSYACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFS 234
R Y K++ + ++ H +G++ I R +N GPRM+ G RV++ F
Sbjct: 82 RSCYDEGKRVAETXMFDYHXXHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFI 234
Query: 235 NNLLRGEPLKLVDGGHSQRTFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQL 294
+RGEPL + G R+F Y+ D ++ ++ +++ N N+GNP E ++ +L
Sbjct: 235 AQAIRGEPLTVQVPGTQTRSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMIEL 402
Query: 295 AELMIKVYAKVAGVPESSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLD 354
AE + ++ P+ ++ ++ + DD +R PD+T + L W+PK L
Sbjct: 403 AENVKELIN-----PKVQINMVENTP--------DDPRQRKPDITKAKELLRWEPKVKLH 543
Query: 355 D 355
D
Sbjct: 544 D 546
>TC218271 homologue to UP|Q9AV98 (Q9AV98) UDP-D-glucuronate carboxy-lyase ,
partial (51%)
Length = 731
Score = 65.1 bits (157), Expect = 5e-11
Identities = 48/178 (26%), Positives = 83/178 (45%)
Frame = +1
Query: 178 YACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNL 237
Y K++ + ++ H ++G++ + R +N G RM+ G RV++ F
Sbjct: 31 YDEXKRVAETXMFDYHRQHGIEIRVARIFNTYGXRMNIDDG---------RVVSNFIAQA 183
Query: 238 LRGEPLKLVDGGHSQRTFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLAEL 297
+RGEPL + G R+F Y+ D ++ ++ +++ D N+GNP E ++ +LAE
Sbjct: 184 IRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMEGSDTGP---INLGNP-GEFTMLELAET 351
Query: 298 MIKVYAKVAGVPESSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDD 355
+ L DV +V DD +R P +T + LGW+PK L D
Sbjct: 352 V------------KELINPDVEIKVVENTP-DDPRQRKPIITKAMELLGWEPKVKLRD 486
>AW734184
Length = 398
Score = 63.5 bits (153), Expect = 1e-10
Identities = 28/49 (57%), Positives = 40/49 (81%)
Frame = +3
Query: 290 SVKQLAELMIKVYAKVAGVPESSLSTLDVSSEVFYGKGYDDSDRRIPDM 338
+V+QLAE+MI+VY+ V+G + T+DVSS+ FYG+GYDDSD+RIP +
Sbjct: 96 TVRQLAEIMIQVYSXVSGEQTAETPTIDVSSKEFYGEGYDDSDKRIPSL 242
>BG239527
Length = 151
Score = 62.8 bits (151), Expect = 3e-10
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 194 AENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPL 243
A+ L+ T+ R +NWIGP MDFIPG+ GP++G ++ACF+ +L G PL
Sbjct: 2 ADRVLELTVARSFNWIGPLMDFIPGIHGPTEGASPLIACFTYPILTGNPL 151
>TC224872 homologue to UP|Q93VR3 (Q93VR3) AT5g28840/F7P1_20, partial (98%)
Length = 1554
Score = 61.2 bits (147), Expect = 7e-10
Identities = 83/362 (22%), Positives = 150/362 (40%), Gaps = 6/362 (1%)
Frame = +3
Query: 5 NLDGKPIVP---ISICLIGGGGFIGSHLTEKLMSETSHKAIVIDVSSEKVNHLLDKSHPW 61
NL+ +P P + I + G GGFI SH+ +L +E + +I +K H+ +
Sbjct: 234 NLEREPYWPSEKLRISITGAGGFIASHIARRLKTEGHY---IIASDWKKNEHMTEDMFCH 404
Query: 62 ANRIEFHQMNIKNDSRLETLVKASDLTINLAAICTPADY-NTRPLDTIYSNFIDAIPVIK 120
EFH ++++ T+ K D NLAA + + +Y+N + + +I+
Sbjct: 405 ----EFHLVDLRVMDNCLTVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIE 572
Query: 121 FCTENN-KRLIHFSTCEVFGKTIGSFLPEEYRKEPQYYKLKEDVSPCIFGPVHKQRWSYA 179
N KR + S+ ++ PE + E + D P + + +Y
Sbjct: 573 AARINGVKRFFYASSACIY--------PEFKQLETNVSLKESDAWPA------EPQDAYG 710
Query: 180 CAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLR 239
K T+ L + + G++ I R +N GP + G + A F L
Sbjct: 711 LEKLATEELCKHYNKDFGIECRIGRFHNIYGPYGTW-------KGGREKAPAAFCRKTLT 869
Query: 240 G-EPLKLVDGGHSQRTFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLAELM 298
+ ++ G R+F +I + +E V+ + + R N+G+ D VS+ ++AE++
Sbjct: 870 SKDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR---EPVNIGS-DEMVSMNEMAEIV 1037
Query: 299 IKVYAKVAGVPESSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDDLLD 358
LS D + +++ G + R D T+I ++LGW P L D L
Sbjct: 1038--------------LSFEDKNIPIYHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLR 1175
Query: 359 ST 360
T
Sbjct: 1176IT 1181
>TC218272 homologue to UP|Q9SMJ5 (Q9SMJ5) DTDP-glucose 4-6-dehydratase ,
partial (48%)
Length = 650
Score = 58.5 bits (140), Expect = 5e-09
Identities = 45/173 (26%), Positives = 79/173 (45%)
Frame = +3
Query: 183 QMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEP 242
++ + L++ H ++G+ + R +N RM+ RV++ F +RGEP
Sbjct: 3 RVAETLMFDYHRQHGIXXRVARIFNTYXXRMNIDDA---------RVVSNFIAQAIRGEP 155
Query: 243 LKLVDGGHSQRTFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMIKVY 302
L + G R+F Y+ D ++ ++ +++ D N+GNP E ++ +LAE +
Sbjct: 156 LTVQSPGTQTRSFCYVSDLVDGLIRLMEGSDTGP---INLGNP-GEFTMLELAETV---- 311
Query: 303 AKVAGVPESSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDD 355
L DV +V DD +R P +T + LGW+PK L D
Sbjct: 312 --------KELINPDVEIKVVENTP-DDPRQRKPIITKAMELLGWEPKVKLRD 443
>TC216254 homologue to UP|Q9AV98 (Q9AV98) UDP-D-glucuronate carboxy-lyase ,
partial (51%)
Length = 686
Score = 57.4 bits (137), Expect = 1e-08
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Frame = +3
Query: 16 ICLIGGGGFIGSHLTEKLMSETSHKAIVID--VSSEKVNHLLDKSHPWANRIEFHQMNIK 73
I + GG GFIGSHL +KLM ++ IV D + K N HP R E I+
Sbjct: 216 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHP---RFEL----IR 374
Query: 74 NDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKFCTENNKRLIHFS 133
+D + L++ D +LA +P Y P+ TI +N I + ++ R++ S
Sbjct: 375 HDVTEQLLIEV-DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 551
Query: 134 TCEVFGKTIGSFLPEEY 150
T +V+G + PE Y
Sbjct: 552 TSQVYGDPLEHPQPESY 602
>TC210161 UP|Q9SDZ2 (Q9SDZ2) 2'-hydroxy isoflavone/dihydroflavonol reductase
homolog (Fragment), complete
Length = 1336
Score = 55.8 bits (133), Expect = 3e-08
Identities = 71/355 (20%), Positives = 154/355 (43%), Gaps = 8/355 (2%)
Frame = +1
Query: 16 ICLIGGGGFIGSHLTEKLMSE--TSHKAIVIDVSSEKVNHLLDKSHPWANRIEFHQMNIK 73
+C+ GG GFIGS + ++L+ + + + + D K L + R++ ++
Sbjct: 25 VCVTGGTGFIGSWIIKRLLEDGYSVNTTVRPDPEHRKDVSFLTSLPRASQRLQILSADLS 204
Query: 74 NDSRLETLVKASDLTINLAAICTPADYNTR-PLDTIYSNFID-AIPVIKFCTENN--KRL 129
N E+ + + + + + + TP D+ R P + + I+ A+ ++K C + KR+
Sbjct: 205 NP---ESFIASIEGCMGVFHVATPVDFELREPEEVVTKRSIEGALGILKACLNSKTVKRV 375
Query: 130 IHFSTCEVFGKTIGSFLPEEYRKEPQYYKLKEDVSPCIFGPVHKQRWSYACAKQMTDRLI 189
++ S+ + E + Y + + FG WSY+ +K +T++ +
Sbjct: 376 VYTSSASAVDNNKEEIMDESSWNDVDYLRSSKP-----FG------WSYSVSKTLTEKAV 522
Query: 190 YAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNL--LRGEPLKLVD 247
+NGL + P GP FI P++ + N+L + GE K
Sbjct: 523 LEFGEQNGLDVVTLIPTLVFGP---FI---------CPKLPSSVRNSLDFILGE--KGTF 660
Query: 248 GGHSQRTFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMIKVYAKVAG 307
G Q +++ D A + ++++P+ +I + V+ +++++L+ Y +
Sbjct: 661 GVVLQTDMVHVDDVARAHIFLLEHPNPKGRYICS----QCSVTYERISKLVSAKYPEFQP 828
Query: 308 VPESSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDDLLDSTLQ 362
P SL+ ++ + KG S +++ D G+ K L++++D +Q
Sbjct: 829 PPVESLNHIEGT------KGSYLSSKKLID-------AGFVYKYGLEEMVDDAIQ 954
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,635,153
Number of Sequences: 63676
Number of extensions: 224439
Number of successful extensions: 1112
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of query: 381
length of database: 12,639,632
effective HSP length: 99
effective length of query: 282
effective length of database: 6,335,708
effective search space: 1786669656
effective search space used: 1786669656
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC144515.13