BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144478.12 + phase: 0 /pseudo
(1250 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC207459 similar to UP|Q94IH6 (Q94IH6) CjMDR1, partial (30%) 525 e-149
TC232373 weakly similar to UP|AB10_MOUSE (Q9JI39) ATP-binding ca... 301 9e-82
TC207563 similar to UP|Q9ZRG2 (Q9ZRG2) P-glycoprotein, partial (... 249 1e-79
TC229309 homologue to UP|Q9LJX0 (Q9LJX0) P-glycoprotein; multi-d... 294 1e-79
TC213020 weakly similar to UP|Q8GU71 (Q8GU71) MDR-like ABC trans... 259 4e-69
TC220745 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-gl... 251 1e-66
TC233020 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-gl... 243 3e-64
TC207596 similar to UP|Q7GBY1 (Q7GBY1) Tonoplast ABC transporter... 230 3e-60
TC219347 similar to UP|Q9LF78 (Q9LF78) Mitochondrial half-ABC tr... 207 3e-53
TC234247 similar to GB|CAD59589.1|27368863|OSA535067 MDR-like AB... 119 2e-50
TC208899 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-gl... 191 2e-48
AW507715 weakly similar to GP|9294227|db P-glycoprotein; multi-d... 177 3e-44
BG839728 similar to PIR|D85023|D8 P-glycoprotein-like protein pg... 114 2e-42
TC229512 similar to UP|Q9SDM5 (Q9SDM5) P-glycoprotein, partial (... 163 4e-40
TC229308 similar to UP|Q8H6F5 (Q8H6F5) MDR-like p-glycoprotein, ... 162 7e-40
BM308693 similar to GP|14715462|d CjMDR1 {Coptis japonica}, part... 161 2e-39
TC229513 similar to UP|Q9SDM5 (Q9SDM5) P-glycoprotein, partial (... 154 2e-37
TC213339 similar to UP|Q9ZRG2 (Q9ZRG2) P-glycoprotein, partial (... 94 6e-37
BG043477 similar to GP|5816991|emb multidrug resistance protein/... 150 3e-36
TC204017 similar to UP|Q8LGU1 (Q8LGU1) Multidrug-resistance rela... 150 4e-36
>TC207459 similar to UP|Q94IH6 (Q94IH6) CjMDR1, partial (30%)
Length = 1329
Score = 525 bits (1353), Expect = e-149
Identities = 261/381 (68%), Positives = 317/381 (82%)
Frame = +1
Query: 870 ANDAVSSIRTVASFCAESKVMDMYSKKCLGPAKQGVRLGLVSGIGFGCSFLVLYCTNAFI 929
+NDAV SIRTVASFCAE KVM++Y KC GP K G+R GL+SG GFG SF +L+C A
Sbjct: 4 SNDAVGSIRTVASFCAEDKVMELYKNKCEGPMKTGIRQGLISGSGFGVSFFLLFCVYATS 183
Query: 930 FYIGSVLVQHGKATFTEVFRVFFALTMTAIAVSQTTTLAPDTNKAKDSAASIFEIIDSKP 989
FY G+ LV GKATF++VFRVFFALTM AI VSQ+++ APD++KAK + ASIF IID K
Sbjct: 184 FYAGARLVDAGKATFSDVFRVFFALTMAAIGVSQSSSFAPDSSKAKSATASIFGIIDKKS 363
Query: 990 DIDSSSNAGVTRETVVGDIELQHVNFNYPTRPDIQIFKDLSLSIPSAKTIALVGESGSGK 1049
ID +G T ++V G+IEL+HV+F YP+RPDIQIF+DLSL+I S KT+ALVGESGSGK
Sbjct: 364 KIDPGDESGSTLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGK 543
Query: 1050 STVISLLERFYDPNSGRILLDGVDLKTFRLSWLRQQMGLVGQEPILFNESIRANIGYGKE 1109
STVI+LL+RFY+P+SG+I LDG++++ +L WLRQQMGLV QEP+LFNE+IRANI YGK
Sbjct: 544 STVIALLQRFYNPDSGQITLDGIEIRELQLKWLRQQMGLVSQEPVLFNETIRANIAYGKG 723
Query: 1110 GGATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQLSGGQKQRIAIARTMLKNPKIL 1169
G ATE EIIAAA ANAH FIS L GYDT VGERGTQLSGGQKQR+AIAR ++K+PKIL
Sbjct: 724 GDATEAEIIAAAEMANAHKFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKIL 903
Query: 1170 LLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRH 1229
LLDEATSALDAESER+VQ+ALD+V VNRTTVVVAHRL+TI+ AD IAV+KNG + EKG+H
Sbjct: 904 LLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKH 1083
Query: 1230 DELMRITDGVYASLVALHSSA 1250
++L+ ++ G YASLV LH+SA
Sbjct: 1084 EKLINVSGGFYASLVQLHTSA 1146
Score = 356 bits (914), Expect = 3e-98
Identities = 191/376 (50%), Positives = 250/376 (65%), Gaps = 45/376 (11%)
Frame = +1
Query: 232 DQTVGAIRTVASFTGEKKAIEKYNSKIKIAYTTMVKQGIVSGFGIGMLTFIAFCTYGLAM 291
+ VG+IRTVASF E K +E Y +K + T ++QG++SG G G+ F+ FC Y +
Sbjct: 7 NDAVGSIRTVASFCAEDKVMELYKNKCEGPMKTGIRQGLISGSGFGVSFFLLFCVYATSF 186
Query: 292 WYGSKLVIEKGYNGGTVMTVIIALMTGGI------------------------------- 320
+ G++LV V V AL I
Sbjct: 187 YAGARLVDAGKATFSDVFRVFFALTMAAIGVSQSSSFAPDSSKAKSATASIFGIIDKKSK 366
Query: 321 -------------IKGDIELRDVSFRYPARPDVQIFDGFSLFVPSGTTTALVGQSGSGKS 367
+KG+IELR VSF+YP+RPD+QIF SL + SG T ALVG+SGSGKS
Sbjct: 367 IDPGDESGSTLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKS 546
Query: 368 TVISLLERFYDPDAGEVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEG 427
TVI+LL+RFY+PD+G++ +DG+ ++ LQL+W+R+Q+GLVSQEP+LF +IR NIAYGK G
Sbjct: 547 TVIALLQRFYNPDSGQITLDGIEIRELQLKWLRQQMGLVSQEPVLFNETIRANIAYGKGG 726
Query: 428 -ATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILL 486
AT+ EI A +ANA KFI L QG DT+ G+ GTQLSGGQKQR+AIARAI+K+PKILL
Sbjct: 727 DATEAEIIAAAEMANAHKFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILL 906
Query: 487 LDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHS 546
LDEATSALDAESER+VQ+AL+K+++ RTTVVVAHRL+TI+NAD+IAVV+ G IVE+G H
Sbjct: 907 LDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHE 1086
Query: 547 GLTMDPDGAYSQLIRL 562
L G Y+ L++L
Sbjct: 1087KLINVSGGFYASLVQL 1134
>TC232373 weakly similar to UP|AB10_MOUSE (Q9JI39) ATP-binding cassette,
sub-family B, member 10, mitochondrial precursor
(ATP-binding cassette transporter 10) (ABC transporter 10
protein) (ABC-mitochondrial erythroid protein) (ABC-me
protein), partial (24%)
Length = 742
Score = 301 bits (772), Expect = 9e-82
Identities = 149/219 (68%), Positives = 186/219 (84%)
Frame = +1
Query: 1031 LSIPSAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDLKTFRLSWLRQQMGLVG 1090
L+I + +T+AL GESGSGKSTVISLL+RFY+P+SG+I LDG +++ +L W RQQMGLV
Sbjct: 1 LTIHAGETVALAGESGSGKSTVISLLQRFYEPDSGQITLDGTEIQKLQLKWFRQQMGLVS 180
Query: 1091 QEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQLSG 1150
QEP+LFN++IR NI YGK G ATE EIIAA ANAH+FIS+L GYDT VGERG QLSG
Sbjct: 181 QEPVLFNDTIRTNIAYGKGGDATEAEIIAATELANAHTFISSLQQGYDTIVGERGIQLSG 360
Query: 1151 GQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIR 1210
GQKQR+AIAR ++KNPKILLLDEATSALD ESER+VQ+ALD+V V+RTT+VVAHRL+TI+
Sbjct: 361 GQKQRVAIARAIVKNPKILLLDEATSALDVESERVVQDALDQVMVDRTTIVVAHRLSTIK 540
Query: 1211 GADTIAVIKNGAVAEKGRHDELMRITDGVYASLVALHSS 1249
AD+IAV++NG +AE+G+HD L+ G+YASLV LH++
Sbjct: 541 DADSIAVVQNGVIAEQGKHDTLLN-KGGIYASLVGLHTN 654
Score = 265 bits (678), Expect = 7e-71
Identities = 135/216 (62%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Frame = +1
Query: 348 LFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLRWIREQIGLVS 407
L + +G T AL G+SGSGKSTVISLL+RFY+PD+G++ +DG ++ LQL+W R+Q+GLVS
Sbjct: 1 LTIHAGETVALAGESGSGKSTVISLLQRFYEPDSGQITLDGTEIQKLQLKWFRQQMGLVS 180
Query: 408 QEPILFTTSIRENIAYGKEG-ATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQLSG 466
QEP+LF +IR NIAYGK G AT+ EI A LANA FI L QG DT+ G+ G QLSG
Sbjct: 181 QEPVLFNDTIRTNIAYGKGGDATEAEIIAATELANAHTFISSLQQGYDTIVGERGIQLSG 360
Query: 467 GQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTTIR 526
GQKQR+AIARAI+KNPKILLLDEATSALD ESER+VQ+AL+++++ RTT+VVAHRL+TI+
Sbjct: 361 GQKQRVAIARAIVKNPKILLLDEATSALDVESERVVQDALDQVMVDRTTIVVAHRLSTIK 540
Query: 527 NADIIAVVQQGKIVERGTHSGLTMDPDGAYSQLIRL 562
+AD IAVVQ G I E+G H L ++ G Y+ L+ L
Sbjct: 541 DADSIAVVQNGVIAEQGKHDTL-LNKGGIYASLVGL 645
>TC207563 similar to UP|Q9ZRG2 (Q9ZRG2) P-glycoprotein, partial (24%)
Length = 1164
Score = 249 bits (637), Expect(2) = 1e-79
Identities = 128/213 (60%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Frame = +1
Query: 1035 SAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDLKTFRLSWLRQQMGLVGQEPI 1094
+ KT+ALVG SG GKS++I+L++RFYDP SGR+++DG D++ + L LR+ + +V QEP
Sbjct: 247 AGKTLALVGPSGCGKSSIIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISVVPQEPC 426
Query: 1095 LFNESIRANIGYGKEGGATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQLSGGQKQ 1154
LF +I NI YG E ATE EII AA ANAH FIS LPDGY T VGERG QLSGGQKQ
Sbjct: 427 LFATTIYENIAYGHES-ATEAEIIEAATLANAHKFISGLPDGYKTFVGERGVQLSGGQKQ 603
Query: 1155 RIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADT 1214
RIA+AR ++ +++LLDEATSALDAESER VQEALDR S +TT++VAHRL+TIR A+
Sbjct: 604 RIAVARAFVRKAELMLLDEATSALDAESERSVQEALDRASSGKTTIIVAHRLSTIRNANL 783
Query: 1215 IAVIKNGAVAEKGRHDELMR-ITDGVYASLVAL 1246
IAVI +G VAE+G H +L++ DG+YA ++ L
Sbjct: 784 IAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQL 882
Score = 245 bits (626), Expect(2) = 7e-69
Identities = 126/219 (57%), Positives = 167/219 (75%), Gaps = 2/219 (0%)
Frame = +1
Query: 347 SLFVP-SGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLRWIREQIGL 405
S+FV +G T ALVG SG GKS++I+L++RFYDP +G V+IDG +++ L+ +R I +
Sbjct: 229 SVFVRRAGKTLALVGPSGCGKSSIIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHISV 408
Query: 406 VSQEPILFTTSIRENIAYGKEGATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQLS 465
V QEP LF T+I ENIAYG E AT+ EI A TLANA KFI LP G T G+ G QLS
Sbjct: 409 VPQEPCLFATTIYENIAYGHESATEAEIIEAATLANAHKFISGLPDGYKTFVGERGVQLS 588
Query: 466 GGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTTI 525
GGQKQRIA+ARA ++ +++LLDEATSALDAESER VQEAL++ +TT++VAHRL+TI
Sbjct: 589 GGQKQRIAVARAFVRKAELMLLDEATSALDAESERSVQEALDRASSGKTTIIVAHRLSTI 768
Query: 526 RNADIIAVVQQGKIVERGTHSGLTMD-PDGAYSQLIRLQ 563
RNA++IAV+ GK+ E+G+HS L + PDG Y+++I+LQ
Sbjct: 769 RNANLIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQ 885
Score = 67.4 bits (163), Expect(2) = 1e-79
Identities = 32/81 (39%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +3
Query: 956 MTAIAVSQTTTLAPDTNKAKDSAASIFEIIDSKPDID-SSSNAGVTRETVVGDIELQHVN 1014
++A ++T TLAPD K + S+FE++D + +I+ +A + + G++EL+HV+
Sbjct: 6 VSANGAAETLTLAPDFIKGGQAMRSVFELLDRRTEIEPDDQDATPVPDRLRGEVELKHVD 185
Query: 1015 FNYPTRPDIQIFKDLSLSIPS 1035
F+YPTRPD+ +F+DLSL S
Sbjct: 186 FSYPTRPDMPVFRDLSLRAKS 248
Score = 35.4 bits (80), Expect(2) = 7e-69
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 321 IKGDIELRDVSFRYPARPDVQIFDGFSL 348
++G++EL+ V F YP RPD+ +F SL
Sbjct: 153 LRGEVELKHVDFSYPTRPDMPVFRDLSL 236
>TC229309 homologue to UP|Q9LJX0 (Q9LJX0) P-glycoprotein; multi-drug resistance
related; ABC transporter-like protein, partial (22%)
Length = 841
Score = 294 bits (753), Expect = 1e-79
Identities = 154/281 (54%), Positives = 205/281 (72%)
Frame = +1
Query: 918 SFLVLYCTNAFIFYIGSVLVQHGKATFTEVFRVFFALTMTAIAVSQTTTLAPDTNKAKDS 977
S L LY + A I + G+ LV G +TF++V +VF L +TA +V++T +LAP+ + ++
Sbjct: 1 SQLALYASEALILWYGAHLVSKGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEA 180
Query: 978 AASIFEIIDSKPDIDSSSNAGVTRETVVGDIELQHVNFNYPTRPDIQIFKDLSLSIPSAK 1037
S+F I+D ID E++ G+IEL+HV+F YP+RPD+ +FKDL+L I + +
Sbjct: 181 VGSVFSILDRSTRIDPDDPDADPVESLRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQ 360
Query: 1038 TIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDLKTFRLSWLRQQMGLVGQEPILFN 1097
+ ALVG SGSGKS+VI+L+ERFYDP +G++++DG D++ L LR ++GLV QEP LF
Sbjct: 361 SQALVGASGSGKSSVIALIERFYDPIAGKVMVDGKDIRKLNLKSLRLKIGLVQQEPALFA 540
Query: 1098 ESIRANIGYGKEGGATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQLSGGQKQRIA 1157
SI NI YGKE GATE E+I AA AAN H F+S LP+GY T VGERG QLSGGQKQRIA
Sbjct: 541 ASIFENIAYGKE-GATEAEVIEAARAANVHGFVSGLPEGYKTPVGERGVQLSGGQKQRIA 717
Query: 1158 IARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRT 1198
IAR +LK+P ILLLDEATSALDAESE ++QEAL+R+ RT
Sbjct: 718 IARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRT 840
Score = 232 bits (591), Expect = 9e-61
Identities = 117/194 (60%), Positives = 150/194 (77%)
Frame = +1
Query: 321 IKGDIELRDVSFRYPARPDVQIFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPD 380
++G+IELR V F YP+RPDV +F +L + +G + ALVG SGSGKS+VI+L+ERFYDP
Sbjct: 259 LRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPI 438
Query: 381 AGEVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEGATDEEITTAITLA 440
AG+V++DG +++ L L+ +R +IGLV QEP LF SI ENIAYGKEGAT+ E+ A A
Sbjct: 439 AGKVMVDGKDIRKLNLKSLRLKIGLVQQEPALFAASIFENIAYGKEGATEAEVIEAARAA 618
Query: 441 NAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESER 500
N F+ LP+G T G+ G QLSGGQKQRIAIARA+LK+P ILLLDEATSALDAESE
Sbjct: 619 NVHGFVSGLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESEC 798
Query: 501 IVQEALEKIILKRT 514
++QEALE+++ RT
Sbjct: 799 VLQEALERLMRGRT 840
>TC213020 weakly similar to UP|Q8GU71 (Q8GU71) MDR-like ABC transporter,
partial (18%)
Length = 864
Score = 259 bits (663), Expect = 4e-69
Identities = 132/220 (60%), Positives = 174/220 (79%)
Frame = +1
Query: 1027 KDLSLSIPSAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDLKTFRLSWLRQQM 1086
++L+L +P+ K++A+VG+SGSGKSTVISL+ RFYDP+SG +L+D D+K L LR ++
Sbjct: 1 ENLNLRVPAGKSLAVVGQSGSGKSTVISLVMRFYDPDSGLVLVDECDIKNLNLRSLRLRI 180
Query: 1087 GLVGQEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHSFISNLPDGYDTSVGERGT 1146
GLV QEP LF+ ++ NI YGKE A+E E++ AA AANAH FIS +P+GY T VGERG
Sbjct: 181 GLVQQEPALFSTTVYENIKYGKEE-ASEIEVMKAAKAANAHEFISRMPEGYKTEVGERGV 357
Query: 1147 QLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRL 1206
QLSGGQKQR+AIAR +LK+P ILLLDEATSALD SER+VQEALD++ RTT++VAHRL
Sbjct: 358 QLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMEGRTTILVAHRL 537
Query: 1207 TTIRGADTIAVIKNGAVAEKGRHDELMRITDGVYASLVAL 1246
+T+R A++IAV++NG VAE G H+ LM + +Y LV+L
Sbjct: 538 STVRDANSIAVLQNGRVAEMGSHERLMAKSGSIYKQLVSL 657
Score = 255 bits (651), Expect = 1e-67
Identities = 130/227 (57%), Positives = 171/227 (75%)
Frame = +1
Query: 344 DGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLRWIREQI 403
+ +L VP+G + A+VGQSGSGKSTVISL+ RFYDPD+G VL+D ++KNL LR +R +I
Sbjct: 1 ENLNLRVPAGKSLAVVGQSGSGKSTVISLVMRFYDPDSGLVLVDECDIKNLNLRSLRLRI 180
Query: 404 GLVSQEPILFTTSIRENIAYGKEGATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQ 463
GLV QEP LF+T++ ENI YGKE A++ E+ A ANA +FI ++P+G T G+ G Q
Sbjct: 181 GLVQQEPALFSTTVYENIKYGKEEASEIEVMKAAKAANAHEFISRMPEGYKTEVGERGVQ 360
Query: 464 LSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLT 523
LSGGQKQR+AIARAILK+P ILLLDEATSALD SER+VQEAL+K++ RTT++VAHRL+
Sbjct: 361 LSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMEGRTTILVAHRLS 540
Query: 524 TIRNADIIAVVQQGKIVERGTHSGLTMDPDGAYSQLIRLQEGDNEAE 570
T+R+A+ IAV+Q G++ E G+H L Y QL+ LQ + E
Sbjct: 541 TVRDANSIAVLQNGRVAEMGSHERLMAKSGSIYKQLVSLQHETRDQE 681
>TC220745 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-glycoprotein,
partial (18%)
Length = 1050
Score = 251 bits (641), Expect = 1e-66
Identities = 136/229 (59%), Positives = 169/229 (73%), Gaps = 5/229 (2%)
Frame = +3
Query: 340 VQIFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLRWI 399
V IF GFS+ + + +TALVGQSGSG ST+I L+ERFYDP G V IDG ++K+ LR +
Sbjct: 3 VMIFQGFSIXIDAXRSTALVGQSGSGXSTIIGLIERFYDPMKGIVTIDGRDIKSYHLRSL 182
Query: 400 REQIGLVSQEPILFTTSIRENIAYGKEGATDE----EITTAITLANAKKFIDKLPQGLDT 455
R+ I LVSQEP LF +IRENIAYG ++ EI A ANA FI L G DT
Sbjct: 183 RKHIALVSQEPTLFGGTIRENIAYGASNNNNKVDETEIIEAARAANAHDFIASLKDGYDT 362
Query: 456 MAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILKRTT 515
G QLSGGQKQRIAIARAILKNP++LLLDEATSALD++SE++VQ+ALE++++ RT+
Sbjct: 363 SCRDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQDALERVMVGRTS 542
Query: 516 VVVAHRLTTIRNADIIAVVQQGKIVERGTHSG-LTMDPDGAYSQLIRLQ 563
VVVAHRL+TI+N D+IAV+ +GK+VE+GTHS L P GAY LI LQ
Sbjct: 543 VVVAHRLSTIQNCDLIAVLDKGKVVEKGTHSSLLAHGPGGAYYSLISLQ 689
Score = 248 bits (633), Expect = 1e-65
Identities = 130/228 (57%), Positives = 166/228 (72%), Gaps = 4/228 (1%)
Frame = +3
Query: 1023 IQIFKDLSLSIPSAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDLKTFRLSWL 1082
+ IF+ S+ I + ++ ALVG+SGSG ST+I L+ERFYDP G + +DG D+K++ L L
Sbjct: 3 VMIFQGFSIXIDAXRSTALVGQSGSGXSTIIGLIERFYDPMKGIVTIDGRDIKSYHLRSL 182
Query: 1083 RQQMGLVGQEPILFNESIRANIGYGKEGG---ATEDEIIAAANAANAHSFISNLPDGYDT 1139
R+ + LV QEP LF +IR NI YG E EII AA AANAH FI++L DGYDT
Sbjct: 183 RKHIALVSQEPTLFGGTIRENIAYGASNNNNKVDETEIIEAARAANAHDFIASLKDGYDT 362
Query: 1140 SVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTT 1199
S +RG QLSGGQKQRIAIAR +LKNP++LLLDEATSALD++SE++VQ+AL+RV V RT+
Sbjct: 363 SCRDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQDALERVMVGRTS 542
Query: 1200 VVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELM-RITDGVYASLVAL 1246
VVVAHRL+TI+ D IAV+ G V EKG H L+ G Y SL++L
Sbjct: 543 VVVAHRLSTIQNCDLIAVLDKGKVVEKGTHSSLLAHGPGGAYYSLISL 686
>TC233020 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-glycoprotein,
partial (15%)
Length = 605
Score = 243 bits (621), Expect = 3e-64
Identities = 122/196 (62%), Positives = 154/196 (78%)
Frame = +1
Query: 345 GFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLRWIREQIG 404
G L VP+G ALVG+SGSGKSTVI+LL+RFYDP GEV +DGV ++ LQL+W+R +G
Sbjct: 16 GTRLRVPAGKRVALVGESGSGKSTVIALLQRFYDPCGGEVRVDGVGIQKLQLKWLRSCMG 195
Query: 405 LVSQEPILFTTSIRENIAYGKEGATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQL 464
LVSQEP LF TSI++NI +GKE AT +++ A A+A FI LP G T G+ G Q+
Sbjct: 196 LVSQEPALFATSIKDNILFGKEDATQDQVVEAAKAAHAHNFISLLPHGYHTQVGERGIQM 375
Query: 465 SGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTT 524
SGGQKQRIAIARAI+K P+ILLLDEATSALD+ESER+VQEAL+ + TT+++AHRL+T
Sbjct: 376 SGGQKQRIAIARAIIKKPRILLLDEATSALDSESERLVQEALDNAAVGCTTIIIAHRLST 555
Query: 525 IRNADIIAVVQQGKIV 540
I+NAD+IAVV GKI+
Sbjct: 556 IQNADLIAVVGGGKII 603
Score = 243 bits (619), Expect = 5e-64
Identities = 122/193 (63%), Positives = 154/193 (79%)
Frame = +1
Query: 1031 LSIPSAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDLKTFRLSWLRQQMGLVG 1090
L +P+ K +ALVGESGSGKSTVI+LL+RFYDP G + +DGV ++ +L WLR MGLV
Sbjct: 25 LRVPAGKRVALVGESGSGKSTVIALLQRFYDPCGGEVRVDGVGIQKLQLKWLRSCMGLVS 204
Query: 1091 QEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQLSG 1150
QEP LF SI+ NI +GKE AT+D+++ AA AA+AH+FIS LP GY T VGERG Q+SG
Sbjct: 205 QEPALFATSIKDNILFGKED-ATQDQVVEAAKAAHAHNFISLLPHGYHTQVGERGIQMSG 381
Query: 1151 GQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIR 1210
GQKQRIAIAR ++K P+ILLLDEATSALD+ESER+VQEALD +V TT+++AHRL+TI+
Sbjct: 382 GQKQRIAIARAIIKKPRILLLDEATSALDSESERLVQEALDNAAVGCTTIIIAHRLSTIQ 561
Query: 1211 GADTIAVIKNGAV 1223
AD IAV+ G +
Sbjct: 562 NADLIAVVGGGKI 600
Score = 30.4 bits (67), Expect = 5.1
Identities = 17/61 (27%), Positives = 30/61 (48%), Gaps = 6/61 (9%)
Frame = +3
Query: 563 QEGDNEAEGSRKSEADKLGDNLNIDSHMAGSSTQRTSF------VRSISQTSSVSHRHSQ 616
+EGD++ G++ +++ G+N + +G S +R RS+ Q SS H H
Sbjct: 357 REGDSDVRGTKTEDSNCEGNN*ETTNSPSGRSNKRAGLRVRETRPRSVGQCSSGLHHHHH 536
Query: 617 S 617
S
Sbjct: 537 S 539
>TC207596 similar to UP|Q7GBY1 (Q7GBY1) Tonoplast ABC transporter IDI7, partial
(35%)
Length = 1076
Score = 230 bits (587), Expect = 3e-60
Identities = 119/215 (55%), Positives = 155/215 (71%)
Frame = +2
Query: 1030 SLSIPSAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDLKTFRLSWLRQQMGLV 1089
+L + +ALVG SG GKST+ +L+ERFYDP G+ILL+GV L L +++ +V
Sbjct: 2 TLKLHPGSKVALVGPSGGGKSTIANLIERFYDPTKGKILLNGVPLVEISHKHLHRKISIV 181
Query: 1090 GQEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQLS 1149
QEP LFN SI NI YG +G + +I AA ANAH FIS P+ Y T VGERG +LS
Sbjct: 182 SQEPTLFNCSIEENIAYGFDGKVNDVDIENAAKMANAHEFISKFPEKYQTFVGERGVRLS 361
Query: 1150 GGQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTI 1209
GGQKQRIAIAR +L +PKILLLDEATSALDAESE +VQ+A++ + RT +V+AHRL+T+
Sbjct: 362 GGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMESLMKGRTVLVIAHRLSTV 541
Query: 1210 RGADTIAVIKNGAVAEKGRHDELMRITDGVYASLV 1244
+ ADT+AVI +G V E+G H+EL+ +GVY +LV
Sbjct: 542 KTADTVAVISDGQVVERGNHEELLN-KNGVYTALV 643
Score = 224 bits (570), Expect = 2e-58
Identities = 113/212 (53%), Positives = 155/212 (72%), Gaps = 1/212 (0%)
Frame = +2
Query: 353 GTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLRWIREQIGLVSQEPIL 412
G+ ALVG SG GKST+ +L+ERFYDP G++L++GV L + + + +I +VSQEP L
Sbjct: 20 GSKVALVGPSGGGKSTIANLIERFYDPTKGKILLNGVPLVEISHKHLHRKISIVSQEPTL 199
Query: 413 FTTSIRENIAYGKEG-ATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQR 471
F SI ENIAYG +G D +I A +ANA +FI K P+ T G+ G +LSGGQKQR
Sbjct: 200 FNCSIEENIAYGFDGKVNDVDIENAAKMANAHEFISKFPEKYQTFVGERGVRLSGGQKQR 379
Query: 472 IAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTTIRNADII 531
IAIARA+L +PKILLLDEATSALDAESE +VQ+A+E ++ RT +V+AHRL+T++ AD +
Sbjct: 380 IAIARALLMDPKILLLDEATSALDAESEYLVQDAMESLMKGRTVLVIAHRLSTVKTADTV 559
Query: 532 AVVQQGKIVERGTHSGLTMDPDGAYSQLIRLQ 563
AV+ G++VERG H L ++ +G Y+ L++ Q
Sbjct: 560 AVISDGQVVERGNHEEL-LNKNGVYTALVKRQ 652
>TC219347 similar to UP|Q9LF78 (Q9LF78) Mitochondrial half-ABC transporter,
partial (36%)
Length = 1085
Score = 207 bits (526), Expect = 3e-53
Identities = 113/238 (47%), Positives = 161/238 (67%)
Frame = +1
Query: 1006 GDIELQHVNFNYPTRPDIQIFKDLSLSIPSAKTIALVGESGSGKSTVISLLERFYDPNSG 1065
G I+ ++V+F+Y T + +I +S +P+ K++A+VG SGSGKST++ LL RF+DP+SG
Sbjct: 46 GRIQFENVHFSYLT--ERKILDGISFVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSG 219
Query: 1066 RILLDGVDLKTFRLSWLRQQMGLVGQEPILFNESIRANIGYGKEGGATEDEIIAAANAAN 1125
I +D +++ L LR+ +G+V Q+ +LFN++I NI YG+ ATE+E+ AA A
Sbjct: 220 SIKIDDQNIREVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLS-ATEEEVYEAAQQAA 396
Query: 1126 AHSFISNLPDGYDTSVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESERI 1185
H+ I PD Y T VGERG +LSGG+KQR+A+AR LK P ILL DEATSALD+ +E
Sbjct: 397 IHNTIMKFPDKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEAE 576
Query: 1186 VQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELMRITDGVYASL 1243
+ AL V+ NRT++ +AHRLTT D I V++NG V E+G H+ L+ G YA L
Sbjct: 577 ILSALKSVANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGPHEVLLS-KAGRYAQL 747
Score = 198 bits (504), Expect = 1e-50
Identities = 106/237 (44%), Positives = 151/237 (62%)
Frame = +1
Query: 323 GDIELRDVSFRYPARPDVQIFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAG 382
G I+ +V F Y + +I DG S VP+G + A+VG SGSGKST++ LL RF+DP +G
Sbjct: 46 GRIQFENVHFSYLT--ERKILDGISFVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSG 219
Query: 383 EVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEGATDEEITTAITLANA 442
+ ID N++ + L +R+ IG+V Q+ +LF +I NI YG+ AT+EE+ A A
Sbjct: 220 SIKIDDQNIREVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYEAAQQAAI 399
Query: 443 KKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIV 502
I K P T+ G+ G +LSGG+KQR+A+ARA LK P ILL DEATSALD+ +E +
Sbjct: 400 HNTIMKFPDKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEAEI 579
Query: 503 QEALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDPDGAYSQL 559
AL+ + RT++ +AHRLTT D I V++ GK++E+G H L + G Y+QL
Sbjct: 580 LSALKSVANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGPHEVL-LSKAGRYAQL 747
>TC234247 similar to GB|CAD59589.1|27368863|OSA535067 MDR-like ABC
transporter {Oryza sativa (japonica cultivar-group);} ,
partial (11%)
Length = 422
Score = 119 bits (297), Expect(2) = 2e-50
Identities = 56/76 (73%), Positives = 65/76 (84%)
Frame = +1
Query: 321 IKGDIELRDVSFRYPARPDVQIFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPD 380
I+GDIELR+V F YP RPD IF+GFSL +PSGTT ALVGQSGSGKSTV+SL+ERFYDP
Sbjct: 10 IRGDIELREVCFSYPTRPDELIFNGFSLSIPSGTTAALVGQSGSGKSTVVSLIERFYDPQ 189
Query: 381 AGEVLIDGVNLKNLQL 396
+G VLIDG+NL+ QL
Sbjct: 190 SGAVLIDGINLREFQL 237
Score = 107 bits (267), Expect(2) = 4e-39
Identities = 51/79 (64%), Positives = 64/79 (80%)
Frame = +1
Query: 1002 ETVVGDIELQHVNFNYPTRPDIQIFKDLSLSIPSAKTIALVGESGSGKSTVISLLERFYD 1061
E + GDIEL+ V F+YPTRPD IF SLSIPS T ALVG+SGSGKSTV+SL+ERFYD
Sbjct: 4 EDIRGDIELREVCFSYPTRPDELIFNGFSLSIPSGTTAALVGQSGSGKSTVVSLIERFYD 183
Query: 1062 PNSGRILLDGVDLKTFRLS 1080
P SG +L+DG++L+ F+L+
Sbjct: 184 PQSGAVLIDGINLREFQLT 240
Score = 100 bits (250), Expect(2) = 2e-50
Identities = 49/65 (75%), Positives = 55/65 (84%)
Frame = +2
Query: 392 KNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEGATDEEITTAITLANAKKFIDKLPQ 451
+N WIR++IGLVSQEP+LFT SI+ENIAYGK+GATDEEI A LANA KFIDKLPQ
Sbjct: 224 ENFN*LWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAAELANAAKFIDKLPQ 403
Query: 452 GLDTM 456
GLDTM
Sbjct: 404 GLDTM 418
Score = 74.3 bits (181), Expect(2) = 4e-39
Identities = 38/67 (56%), Positives = 47/67 (69%)
Frame = +2
Query: 1075 KTFRLSWLRQQMGLVGQEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHSFISNLP 1134
+ F W+RQ++GLV QEP+LF SI+ NI YGK+ GAT++EI AAA ANA FI LP
Sbjct: 224 ENFN*LWIRQKIGLVSQEPVLFTCSIKENIAYGKD-GATDEEIRAAAELANAAKFIDKLP 400
Query: 1135 DGYDTSV 1141
G DT V
Sbjct: 401 QGLDTMV 421
>TC208899 similar to UP|Q9LHD1 (Q9LHD1) Multidrug resistance p-glycoprotein,
partial (14%)
Length = 983
Score = 191 bits (484), Expect = 2e-48
Identities = 104/184 (56%), Positives = 131/184 (70%), Gaps = 4/184 (2%)
Frame = +3
Query: 384 VLIDGVNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGK---EGATDEEITTAITLA 440
V IDG+++K+ L+ +R+ I LVSQEP LF +IRENIAYG+ E + EI A A
Sbjct: 6 VTIDGMDIKSYNLKSLRKHIALVSQEPTLFGGTIRENIAYGRCESERVDESEIIEAARAA 185
Query: 441 NAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESER 500
NA FI L +G +T G G QLSGGQKQRIAIARAILKNPK+LLLDEATSALD SE+
Sbjct: 186 NAHDFIASLKEGYETWCGDKGVQLSGGQKQRIAIARAILKNPKVLLLDEATSALDGPSEK 365
Query: 501 IVQEALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDPD-GAYSQL 559
+VQ+ L +++ RT VVVAHRL+TI N D+I V+++G++VE GTHS L GAY L
Sbjct: 366 VVQDTLMRVMRGRTGVVVAHRLSTIHNCDVIGVLEKGRVVEIGTHSSLLAKGSCGAYYSL 545
Query: 560 IRLQ 563
+ LQ
Sbjct: 546 VSLQ 557
Score = 190 bits (482), Expect = 4e-48
Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 3/185 (1%)
Frame = +3
Query: 1067 ILLDGVDLKTFRLSWLRQQMGLVGQEPILFNESIRANIGYGK--EGGATEDEIIAAANAA 1124
+ +DG+D+K++ L LR+ + LV QEP LF +IR NI YG+ E EII AA AA
Sbjct: 6 VTIDGMDIKSYNLKSLRKHIALVSQEPTLFGGTIRENIAYGRCESERVDESEIIEAARAA 185
Query: 1125 NAHSFISNLPDGYDTSVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESER 1184
NAH FI++L +GY+T G++G QLSGGQKQRIAIAR +LKNPK+LLLDEATSALD SE+
Sbjct: 186 NAHDFIASLKEGYETWCGDKGVQLSGGQKQRIAIARAILKNPKVLLLDEATSALDGPSEK 365
Query: 1185 IVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELM-RITDGVYASL 1243
+VQ+ L RV RT VVVAHRL+TI D I V++ G V E G H L+ + + G Y SL
Sbjct: 366 VVQDTLMRVMRGRTGVVVAHRLSTIHNCDVIGVLEKGRVVEIGTHSSLLAKGSCGAYYSL 545
Query: 1244 VALHS 1248
V+L +
Sbjct: 546 VSLQT 560
>AW507715 weakly similar to GP|9294227|db P-glycoprotein; multi-drug resistance
related; ABC transporter-like protein {Arabidopsis
thaliana}, partial (17%)
Length = 655
Score = 177 bits (449), Expect = 3e-44
Identities = 98/219 (44%), Positives = 141/219 (63%)
Frame = +2
Query: 1029 LSLSIPSAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDLKTFRLSWLRQQMGL 1088
+ L I + ALVG + SGK++VI+L++ FYDP + ++++DG D+ L +R ++GL
Sbjct: 2 IRLRIRAGHIQALVGANSSGKTSVIALIDTFYDPIAVKVMVDGKDIMKSNLKSMRLKIGL 181
Query: 1089 VGQEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQL 1148
EP LF SI NI Y EG A E ++IAAA AAN H F+S LP GY+T G+R +L
Sbjct: 182 APLEPALFAASIVDNIAYATEGAA-EADVIAAARAANVHGFVSGLPKGYNTPGGQRCVRL 358
Query: 1149 SGGQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTT 1208
S G IAIAR +LK+P IL+L E T+ALDAESE ++ +AL+R+ RTT +VA ++T
Sbjct: 359 SRGLTLTIAIARAVLKDPTILVLYEVTTALDAESECVLHKALERLMTGRTTELVASLIST 538
Query: 1209 IRGADTIAVIKNGAVAEKGRHDELMRITDGVYASLVALH 1247
RG D I V+ +G + ++ H +L+ G Y L+ LH
Sbjct: 539 NRGVDGIGVLNDGRIVQQDLHTQLVSTP*GAYPILLHLH 655
Score = 175 bits (443), Expect = 1e-43
Identities = 96/215 (44%), Positives = 139/215 (64%)
Frame = +2
Query: 348 LFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLRWIREQIGLVS 407
L + +G ALVG + SGK++VI+L++ FYDP A +V++DG ++ L+ +R +IGL
Sbjct: 8 LRIRAGHIQALVGANSSGKTSVIALIDTFYDPIAVKVMVDGKDIMKSNLKSMRLKIGLAP 187
Query: 408 QEPILFTTSIRENIAYGKEGATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQLSGG 467
EP LF SI +NIAY EGA + ++ A AN F+ LP+G +T GQ +LS G
Sbjct: 188 LEPALFAASIVDNIAYATEGAAEADVIAAARAANVHGFVSGLPKGYNTPGGQRCVRLSRG 367
Query: 468 QKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTTIRN 527
IAIARA+LK+P IL+L E T+ALDAESE ++ +ALE+++ RTT +VA ++T R
Sbjct: 368 LTLTIAIARAVLKDPTILVLYEVTTALDAESECVLHKALERLMTGRTTELVASLISTNRG 547
Query: 528 ADIIAVVQQGKIVERGTHSGLTMDPDGAYSQLIRL 562
D I V+ G+IV++ H+ L P GAY L+ L
Sbjct: 548 VDGIGVLNDGRIVQQDLHTQLVSTP*GAYPILLHL 652
>BG839728 similar to PIR|D85023|D8 P-glycoprotein-like protein pgp3
[imported] - Arabidopsis thaliana, partial (10%)
Length = 577
Score = 114 bits (285), Expect(3) = 2e-42
Identities = 60/113 (53%), Positives = 79/113 (69%), Gaps = 6/113 (5%)
Frame = -1
Query: 10 NSSSSPTQQHGIRDNKTKQK-----VPFYMLFNFADHLDVTLMIIGTISAVANGLASPLM 64
+ +S+ T +G + K KQK VPF+ LF FAD D+ LM +GTI A+ NGL PLM
Sbjct: 487 SENSAETSTNGEKREKGKQKEKPETVPFHKLFAFADSTDILLMAVGTIGAIGNGLGLPLM 308
Query: 65 TLFLGNVINAFGSSNP-ADAIKQVSKVSLLFVYLAIGSGIASFLQVTCWMVTG 116
TL G +I++FGS+ +++VSKVSL FVYLA+GSG+A+FLQVT WMVTG
Sbjct: 307 TLLFGQMIDSFGSNQQNTHVVEEVSKVSLKFVYLAVGSGMAAFLQVTSWMVTG 149
Score = 72.0 bits (175), Expect(3) = 2e-42
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -2
Query: 116 GERQAARIRSLYLKTILQQDIAFFDTETNTGEVIGRMSG 154
GERQAARIR LYLKTIL+QD+AFFD ETNTGEVIG+MSG
Sbjct: 150 GERQAARIRGLYLKTILRQDVAFFDKETNTGEVIGKMSG 34
Score = 26.9 bits (58), Expect(3) = 2e-42
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 150 GRMSGDTILIQEAMG 164
GR GDT+LIQ+AMG
Sbjct: 47 GRCLGDTVLIQDAMG 3
>TC229512 similar to UP|Q9SDM5 (Q9SDM5) P-glycoprotein, partial (11%)
Length = 633
Score = 163 bits (413), Expect = 4e-40
Identities = 81/136 (59%), Positives = 107/136 (78%)
Frame = +1
Query: 433 ITTAITLANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATS 492
+ A+ LANA FI L +G T G G QL GGQ+QR+AIARA+LKNP+ILLLDEATS
Sbjct: 1 VIEAVKLANAHNFISGLXEGXXTKVGXRGVQLXGGQRQRVAIARAVLKNPEILLLDEATS 180
Query: 493 ALDAESERIVQEALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDP 552
ALD ESERIVQ+AL++++ RTTV+VAHRL+TIRNAD I+V+Q GKI+++GTHS L +
Sbjct: 181 ALDVESERIVQQALDRLMQNRTTVMVAHRLSTIRNADQISVLQDGKIIDQGTHSSLIENK 360
Query: 553 DGAYSQLIRLQEGDNE 568
+GAY +L+ LQ+ ++
Sbjct: 361 NGAYYKLVNLQQQQHQ 408
Score = 158 bits (400), Expect = 1e-38
Identities = 80/130 (61%), Positives = 100/130 (76%)
Frame = +1
Query: 1117 IIAAANAANAHSFISNLPDGYDTSVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATS 1176
+I A ANAH+FIS L +G T VG RG QL GGQ+QR+AIAR +LKNP+ILLLDEATS
Sbjct: 1 VIEAVKLANAHNFISGLXEGXXTKVGXRGVQLXGGQRQRVAIARAVLKNPEILLLDEATS 180
Query: 1177 ALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELMRIT 1236
ALD ESERIVQ+ALDR+ NRTTV+VAHRL+TIR AD I+V+++G + ++G H L+
Sbjct: 181 ALDVESERIVQQALDRLMQNRTTVMVAHRLSTIRNADQISVLQDGKIIDQGTHSSLIENK 360
Query: 1237 DGVYASLVAL 1246
+G Y LV L
Sbjct: 361 NGAYYKLVNL 390
>TC229308 similar to UP|Q8H6F5 (Q8H6F5) MDR-like p-glycoprotein, partial (11%)
Length = 617
Score = 162 bits (411), Expect = 7e-40
Identities = 81/136 (59%), Positives = 101/136 (73%)
Frame = +3
Query: 1111 GATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQLSGGQKQRIAIARTMLKNPKILL 1170
GA E+I A AAN H F+S LP+GY T VGERG Q GGQKQRIAIAR +LK+P L
Sbjct: 6 GAXXXEVIEXARAANVHGFVSGLPEGYKTPVGERGVQXXGGQKQRIAIARAVLKDPTXXL 185
Query: 1171 LDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHD 1230
LDEATSALDAESE ++QEAL+R+ RTTV+VAHRL+TIRG D I V+++G + E+G H
Sbjct: 186 LDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHS 365
Query: 1231 ELMRITDGVYASLVAL 1246
EL+ +G Y+ L+ L
Sbjct: 366 ELVSRPEGAYSRLLQL 413
Score = 158 bits (400), Expect = 1e-38
Identities = 81/138 (58%), Positives = 101/138 (72%)
Frame = +3
Query: 426 EGATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKIL 485
EGA E+ AN F+ LP+G T G+ G Q GGQKQRIAIARA+LK+P
Sbjct: 3 EGAXXXEVIEXARAANVHGFVSGLPEGYKTPVGERGVQXXGGQKQRIAIARAVLKDPTXX 182
Query: 486 LLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTH 545
LLDEATSALDAESE ++QEALE+++ RTTV+VAHRL+TIR D I VVQ G+IVE+G+H
Sbjct: 183 LLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSH 362
Query: 546 SGLTMDPDGAYSQLIRLQ 563
S L P+GAYS+L++LQ
Sbjct: 363 SELVSRPEGAYSRLLQLQ 416
>BM308693 similar to GP|14715462|d CjMDR1 {Coptis japonica}, partial (10%)
Length = 414
Score = 161 bits (407), Expect = 2e-39
Identities = 77/135 (57%), Positives = 104/135 (77%)
Frame = +1
Query: 830 LAFIVLVLTPMILMQGIVQMKFLKGFSADAKVMYEEASQVANDAVSSIRTVASFCAESKV 889
L+ I+LVL P++L+ G VQM ++GF DAK +YEEASQVANDAV +IRT+A+FCAE KV
Sbjct: 4 LSLIILVLLPLLLVNGQVQMGSMQGFVTDAKKLYEEASQVANDAVGNIRTIAAFCAEEKV 183
Query: 890 MDMYSKKCLGPAKQGVRLGLVSGIGFGCSFLVLYCTNAFIFYIGSVLVQHGKATFTEVFR 949
M++Y KKCLGP K G+ G+VSG FG S +++ N+ FY G+ LV++GK + ++VFR
Sbjct: 184 MNLYQKKCLGPIKTGIWQGIVSGTSFGLSLFLVFSVNSCSFYAGARLVENGKTSISDVFR 363
Query: 950 VFFALTMTAIAVSQT 964
VFF LTM AIA+SQ+
Sbjct: 364 VFFTLTMAAIAISQS 408
Score = 61.2 bits (147), Expect = 3e-09
Identities = 34/109 (31%), Positives = 55/109 (50%)
Frame = +1
Query: 190 RLAIVLLACVPCVAVAGAFMSIVMAKMSSRGQIAYAEAGNVVDQTVGAIRTVASFTGEKK 249
+L++++L +P + V G M + + Y EA V + VG IRT+A+F E+K
Sbjct: 1 QLSLIILVLLPLLLVNGQVQMGSMQGFVTDAKKLYEEASQVANDAVGNIRTIAAFCAEEK 180
Query: 250 AIEKYNSKIKIAYTTMVKQGIVSGFGIGMLTFIAFCTYGLAMWYGSKLV 298
+ Y K T + QGIVSG G+ F+ F + + G++LV
Sbjct: 181 VMNLYQKKCLGPIKTGIWQGIVSGTSFGLSLFLVFSVNSCSFYAGARLV 327
>TC229513 similar to UP|Q9SDM5 (Q9SDM5) P-glycoprotein, partial (10%)
Length = 620
Score = 154 bits (389), Expect = 2e-37
Identities = 76/120 (63%), Positives = 95/120 (78%)
Frame = +3
Query: 1127 HSFISNLPDGYDTSVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESERIV 1186
H+FIS LP+GY T VGERG QLSGG + R+AIAR +LKNP+ILLLDEATSALD ESERIV
Sbjct: 3 HNFISGLPEGYSTKVGERGVQLSGGPRPRVAIARAVLKNPEILLLDEATSALDVESERIV 182
Query: 1187 QEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELMRITDGVYASLVAL 1246
Q ALDR+ NRTT++VAHRL+TIR AD I+V+++G + ++G H L+ +G Y LV L
Sbjct: 183 QPALDRLMQNRTTIMVAHRLSTIRNADQISVLQDGKIIDQGTHSSLIENKNGAYYKLVNL 362
Score = 154 bits (389), Expect = 2e-37
Identities = 75/120 (62%), Positives = 98/120 (81%)
Frame = +3
Query: 445 FIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQE 504
FI LP+G T G+ G QLSGG + R+AIARA+LKNP+ILLLDEATSALD ESERIVQ
Sbjct: 9 FISGLPEGYSTKVGERGVQLSGGPRPRVAIARAVLKNPEILLLDEATSALDVESERIVQP 188
Query: 505 ALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDPDGAYSQLIRLQE 564
AL++++ RTT++VAHRL+TIRNAD I+V+Q GKI+++GTHS L + +GAY +L+ LQ+
Sbjct: 189 ALDRLMQNRTTIMVAHRLSTIRNADQISVLQDGKIIDQGTHSSLIENKNGAYYKLVNLQQ 368
>TC213339 similar to UP|Q9ZRG2 (Q9ZRG2) P-glycoprotein, partial (15%)
Length = 582
Score = 94.4 bits (233), Expect(2) = 4e-24
Identities = 46/86 (53%), Positives = 58/86 (66%)
Frame = +1
Query: 382 GEVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEGATDEEITTAITLAN 441
G+V+IDG +++ L+ +R I +V QEP LF T+I ENIAYG + A+D EI A TLAN
Sbjct: 325 GQVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSASDAEIIEAATLAN 504
Query: 442 AKKFIDKLPQGLDTMAGQNGTQLSGG 467
A KFI LP G T G+ G QLSGG
Sbjct: 505 AHKFISSLPDGYKTFVGERGVQLSGG 582
Score = 94.0 bits (232), Expect(2) = 6e-37
Identities = 47/87 (54%), Positives = 62/87 (71%)
Frame = +1
Query: 1065 GRILLDGVDLKTFRLSWLRQQMGLVGQEPILFNESIRANIGYGKEGGATEDEIIAAANAA 1124
G++++DG D++ + L LR+ + +V QEP LF +I NI YG + A++ EII AA A
Sbjct: 325 GQVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDS-ASDAEIIEAATLA 501
Query: 1125 NAHSFISNLPDGYDTSVGERGTQLSGG 1151
NAH FIS+LPDGY T VGERG QLSGG
Sbjct: 502 NAHKFISSLPDGYKTFVGERGVQLSGG 582
Score = 80.5 bits (197), Expect(2) = 6e-37
Identities = 39/99 (39%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Frame = +3
Query: 934 SVLVQHGKATFTEVFRVFFALTMTAIAVSQTTTLAPDTNKAKDSAASIFEIIDSKPDID- 992
S LV+HG + F+ RVF L ++A ++T TLAPD K + S F+++D + +I+
Sbjct: 21 SWLVKHGISDFSNTIRVFMVLMVSANGAAETLTLAPDFIKGGHAMRSAFDLLDRRTEIEP 200
Query: 993 SSSNAGVTRETVVGDIELQHVNFNYPTRPDIQIFKDLSL 1031
+A +++ G++EL+HV+F+YPTRPD+ +F++LSL
Sbjct: 201 DDPDATPVPDSLRGEVELKHVDFSYPTRPDMSVFRNLSL 317
Score = 37.0 bits (84), Expect(2) = 4e-24
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 321 IKGDIELRDVSFRYPARPDVQIFDGFSLFVPSG 353
++G++EL+ V F YP RPD+ +F SL +G
Sbjct: 234 LRGEVELKHVDFSYPTRPDMSVFRNLSLRARAG 332
>BG043477 similar to GP|5816991|emb multidrug resistance
protein/P-glycoprotein-like {Arabidopsis thaliana},
partial (7%)
Length = 409
Score = 150 bits (380), Expect = 3e-36
Identities = 74/90 (82%), Positives = 79/90 (87%)
Frame = -1
Query: 861 VMYEEASQVANDAVSSIRTVASFCAESKVMDMYSKKCLGPAKQGVRLGLVSGIGFGCSFL 920
VMYEEA+QVA DAV SIRTVASFCAE KVM+MY KKC GP KQGVRLGLVSG G G SF+
Sbjct: 361 VMYEEANQVATDAVGSIRTVASFCAEPKVMEMYRKKCSGPEKQGVRLGLVSGAGLGFSFV 182
Query: 921 VLYCTNAFIFYIGSVLVQHGKATFTEVFRV 950
VLYCTNAF FYIGS+LVQHGKATF EVF+V
Sbjct: 181 VLYCTNAFCFYIGSILVQHGKATFGEVFKV 92
Score = 58.9 bits (141), Expect = 1e-08
Identities = 31/77 (40%), Positives = 40/77 (51%)
Frame = -1
Query: 222 IAYAEAGNVVDQTVGAIRTVASFTGEKKAIEKYNSKIKIAYTTMVKQGIVSGFGIGMLTF 281
+ Y EA V VG+IRTVASF E K +E Y K V+ G+VSG G+G
Sbjct: 361 VMYEEANQVATDAVGSIRTVASFCAEPKVMEMYRKKCSGPEKQGVRLGLVSGAGLGFSFV 182
Query: 282 IAFCTYGLAMWYGSKLV 298
+ +CT + GS LV
Sbjct: 181 VLYCTNAFCFYIGSILV 131
>TC204017 similar to UP|Q8LGU1 (Q8LGU1) Multidrug-resistance related protein,
partial (31%)
Length = 1388
Score = 150 bits (378), Expect = 4e-36
Identities = 87/241 (36%), Positives = 148/241 (61%), Gaps = 2/241 (0%)
Frame = +3
Query: 322 KGDIELRDVSFRYPARPDVQ-IFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPD 380
KG I+L+ + RY RP+ + G + G+ +VG++GSGKST+IS L R DP
Sbjct: 438 KGRIDLQALEIRY--RPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVDPA 611
Query: 381 AGEVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEGA-TDEEITTAITL 439
G +LIDG+N+ ++ L+ +R ++ ++ QEP LF SIR N+ G +D+EI A+
Sbjct: 612 KGYILIDGINICSIGLKDLRMKLSIIPQEPTLFKGSIRTNL--DPLGLYSDDEIWEALEK 785
Query: 440 ANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESE 499
K+ I +LP LD+ G S GQ+Q + R +LK +IL+LDEAT+++D+ ++
Sbjct: 786 CQLKETISRLPNLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATD 965
Query: 500 RIVQEALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDPDGAYSQL 559
I+Q+ + + ++ T + VAHR+ T+ ++D++ V+ GK+VE S L M+ + ++S+L
Sbjct: 966 AILQQIIRQEFVECTVITVAHRVPTVIDSDMVMVLSYGKLVEYEEPSRL-METNSSFSKL 1142
Query: 560 I 560
+
Sbjct: 1143V 1145
Score = 143 bits (360), Expect = 5e-34
Identities = 87/246 (35%), Positives = 140/246 (56%), Gaps = 1/246 (0%)
Frame = +3
Query: 1006 GDIELQHVNFNYPTRPDIQ-IFKDLSLSIPSAKTIALVGESGSGKSTVISLLERFYDPNS 1064
G I+LQ + Y RP+ + K ++ + + +VG +GSGKST+IS L R DP
Sbjct: 441 GRIDLQALEIRY--RPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVDPAK 614
Query: 1065 GRILLDGVDLKTFRLSWLRQQMGLVGQEPILFNESIRANIGYGKEGGATEDEIIAAANAA 1124
G IL+DG+++ + L LR ++ ++ QEP LF SIR N+ G ++DEI A
Sbjct: 615 GYILIDGINICSIGLKDLRMKLSIIPQEPTLFKGSIRTNLD--PLGLYSDDEIWEALEKC 788
Query: 1125 NAHSFISNLPDGYDTSVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESER 1184
IS LP+ D+SV + G S GQ+Q + R +LK +IL+LDEAT+++D+ ++
Sbjct: 789 QLKETISRLPNLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDA 968
Query: 1185 IVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELMRITDGVYASLV 1244
I+Q+ + + V T + VAHR+ T+ +D + V+ G + E LM T+ ++ LV
Sbjct: 969 ILQQIIRQEFVECTVITVAHRVPTVIDSDMVMVLSYGKLVEYEEPSRLME-TNSSFSKLV 1145
Query: 1245 ALHSSA 1250
A + S+
Sbjct: 1146 AEYWSS 1163
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.321 0.136 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,307,948
Number of Sequences: 63676
Number of extensions: 518641
Number of successful extensions: 2952
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2879
length of query: 1250
length of database: 12,639,632
effective HSP length: 108
effective length of query: 1142
effective length of database: 5,762,624
effective search space: 6580916608
effective search space used: 6580916608
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Medicago: description of AC144478.12