BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144474.7 - phase: 0
(329 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC213008 weakly similar to UP|Q94AA3 (Q94AA3) AT3g09210/F3L24_8,... 113 1e-25
BF219556 weakly similar to GP|15146210|gb| AT3g09210/F3L24_8 {Ar... 103 8e-23
TC216648 weakly similar to UP|Q9FFQ8 (Q9FFQ8) Emb|CAB62360.1, pa... 33 0.23
AW508862 33 0.23
TC223428 similar to UP|Q8VZE1 (Q8VZE1) At2g17250/T23A1.11, parti... 31 0.67
TC214570 homologue to PIR|T05766|T05766 peptidylprolyl isomerase... 31 0.67
CA853170 30 1.5
TC216756 similar to PIR|T05768|T05768 subtilisin-like proteinase... 30 1.5
TC206106 weakly similar to UP|Q7RK82 (Q7RK82) Maebl (Fragment), ... 29 2.6
TC216018 homologue to UP|O04720 (O04720) Cysteine proteinase inh... 29 2.6
TC216677 similar to GB|AAS58514.1|45357110|AY550303 MYB transcri... 29 2.6
TC227415 similar to UP|Q9LVD9 (Q9LVD9) Gb|AAC28507.1, partial (89%) 29 3.3
TC221939 similar to UP|Q8GSM9 (Q8GSM9) Squalene monooxygenase 2 ... 28 4.4
CA938733 similar to PIR|T07139|T071 cysteine proteinase inhibito... 28 4.4
TC203793 similar to PIR|T02602|T02602 vacuolar sorting receptor ... 28 4.4
BM887094 similar to GP|13265463|gb| AT4g27350 {Arabidopsis thali... 28 4.4
TC228275 weakly similar to UP|Q9M3D0 (Q9M3D0) Lipase-like protei... 28 5.7
TC215938 similar to UP|Q940M0 (Q940M0) At1g63980/F22C12_9, parti... 28 5.7
TC221115 similar to UP|Q9MSB5 (Q9MSB5) Phosphoenolpyruvate/phosp... 28 7.4
TC232450 weakly similar to UP|Q8W2K5 (Q8W2K5) Phragmoplastin-int... 28 7.4
>TC213008 weakly similar to UP|Q94AA3 (Q94AA3) AT3g09210/F3L24_8, partial
(17%)
Length = 422
Score = 113 bits (283), Expect = 1e-25
Identities = 64/121 (52%), Positives = 79/121 (64%), Gaps = 16/121 (13%)
Frame = +1
Query: 10 WNPP---PRFYTPSLSTKPP----LSISATSSPEL-------LTAKERRRLRNERRE--S 53
WNPP + PS+S P ++SA+S+P L+A+ERRR R+ERRE S
Sbjct: 58 WNPPCFHDALHLPSVSLLPTRPFFFTLSASSTPSAPVESASQLSARERRRARSERRETRS 237
Query: 54 NATNWKEEVENKLIQKTKKVNKSWKDELNLDNLMKLGPQWWGVRVSRVKGQYTAEALARS 113
A NW+E VE +L++K KK SW DELNLDNL KLGPQWW +RVSRVKG A+ LARS
Sbjct: 238 GAKNWREVVEERLMEKPKKQKGSWMDELNLDNLAKLGPQWWVIRVSRVKGNDIAQLLARS 417
Query: 114 L 114
L
Sbjct: 418 L 420
>BF219556 weakly similar to GP|15146210|gb| AT3g09210/F3L24_8 {Arabidopsis
thaliana}, partial (19%)
Length = 704
Score = 103 bits (258), Expect = 8e-23
Identities = 53/92 (57%), Positives = 65/92 (70%)
Frame = -2
Query: 238 DVSKAIVDSKPKRGSRKTSNQLTITEEASSAKKKPKLVTGSTVQIISGSFLGFAGTLKKL 297
D+ AIVD KR SRK S T+ +S+ LV GSTV+++SG+F GF GT KKL
Sbjct: 685 DILNAIVDYXSKRXSRKASXXXKATDASSTRINYKLLVPGSTVRVLSGTFSGFTGTXKKL 506
Query: 298 NSKTKMATVHFTMFGKENIVDLDVSEIVPETN 329
N KTK+ATVHFT+FGKENI D+DV+EI ETN
Sbjct: 505 NRKTKLATVHFTLFGKENIADIDVNEIAIETN 410
>TC216648 weakly similar to UP|Q9FFQ8 (Q9FFQ8) Emb|CAB62360.1, partial (41%)
Length = 2064
Score = 32.7 bits (73), Expect = 0.23
Identities = 39/154 (25%), Positives = 65/154 (41%), Gaps = 8/154 (5%)
Frame = +1
Query: 169 EYEGVGGFIGSKVGNTKKQINKPRPVAEDDMEAIFK--QAKVEQENADK--AFEEEEKKA 224
E G G GN +++ + AE+ E I + + K EQE ++ EE+EK+
Sbjct: 229 ENANAGDKDGGAAGN--QEVEEEADAAEEKKEEIDEDGEEKDEQEEKEEEDEAEEKEKEK 402
Query: 225 AVNSGNPNKELESDVSKAIVDSKPKRGSRKTSNQLTITEEASSAKKKPKLVTGSTVQIIS 284
A G + + V+ A +P R RKT + ++ A SA+ G ++
Sbjct: 403 AKGKGKRRRSKKDPVTPA-PSERPTR-ERKTVERFSVPSPAKSARSSAS--KGLIIEKGR 570
Query: 285 GSFL----GFAGTLKKLNSKTKMATVHFTMFGKE 314
G+ L A L K + +H +FGK+
Sbjct: 571 GTQLKDIPNVAFKLSKRKPDDNLHMLHTLLFGKK 672
Score = 30.8 bits (68), Expect = 0.88
Identities = 21/86 (24%), Positives = 43/86 (49%)
Frame = +1
Query: 185 KKQINKPRPVAEDDMEAIFKQAKVEQENADKAFEEEEKKAAVNSGNPNKELESDVSKAIV 244
K +++ + V+++D + + + E + ++ EEEEK + + ES VSKA
Sbjct: 1072 KAELSDAKGVSQEDEDVAVPNNESDDEES-RSEEEEEKSKSRKRTSKKAVKESSVSKADR 1248
Query: 245 DSKPKRGSRKTSNQLTITEEASSAKK 270
S K+ K + + T++ ++KK
Sbjct: 1249 TSSVKKTPVKDAKSIEKTKKKPTSKK 1326
>AW508862
Length = 188
Score = 32.7 bits (73), Expect = 0.23
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 3 GMLTLHLWNPPPRFYTPSLSTKPPLSISATSSP 35
G T W+PPP +P+ PP S +A SSP
Sbjct: 21 GSTTTSCWSPPPMLCSPTAPPSPPPSETAPSSP 119
>TC223428 similar to UP|Q8VZE1 (Q8VZE1) At2g17250/T23A1.11, partial (22%)
Length = 635
Score = 31.2 bits (69), Expect = 0.67
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 12 PPPRFYTPSLSTKPPL--SISATSSPELLTAKERRRLRNERRESNATNW 58
PPP PS ST P S +++SSP ++ RR +R R +W
Sbjct: 224 PPPATTNPSSSTSPGSVPSSTSSSSPSSTSSLRRREMRRSRNSCWTRSW 370
>TC214570 homologue to PIR|T05766|T05766 peptidylprolyl isomerase M4E13.20 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(13%)
Length = 944
Score = 31.2 bits (69), Expect = 0.67
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2
Query: 178 GSKVGNTKKQINKP-RPVAEDDMEAIFKQAKVEQENADKAFEEEE--KKAAVNSGNPNKE 234
GS + T + P + V D++E + KQ KV+ + D+ E E KK NKE
Sbjct: 344 GSGILTTDSPVAVPAKKVKVDEVEEVEKQEKVKVKKVDEETVEVEVEKKEKKKKKKKNKE 523
Query: 235 LESDVSKAIVDSKPKRGSRKTSNQLTITEEASSAKKKPK 273
S ++ K+ K + + E S KKK K
Sbjct: 524 NSEAASSDEEKTEKKKKKHKDKVEDSSPELDKSEKKKKK 640
>CA853170
Length = 493
Score = 30.0 bits (66), Expect = 1.5
Identities = 13/46 (28%), Positives = 24/46 (51%)
Frame = -1
Query: 65 KLIQKTKKVNKSWKDELNLDNLMKLGPQWWGVRVSRVKGQYTAEAL 110
K +++ K+ +K E++L +++ GP+WW R G E L
Sbjct: 331 KYKRESNKIEIGFKQEVSLQRVVE*GPRWWFHEGRRCSGLMATEIL 194
>TC216756 similar to PIR|T05768|T05768 subtilisin-like proteinase -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(13%)
Length = 764
Score = 30.0 bits (66), Expect = 1.5
Identities = 25/76 (32%), Positives = 35/76 (45%), Gaps = 8/76 (10%)
Frame = -3
Query: 12 PPPRFYTPSLSTKPPLSISATSSPEL---LTAKERRRLRNERRESNA-----TNWKEEVE 63
PPP S+S+ PP + +AT+SP L A R R + R + T+WK
Sbjct: 363 PPPPSPHSSVSSPPPRTRAATASPSRSPHLRAPPRLRGKQSSRAPHCSRSV*TSWKPPSS 184
Query: 64 NKLIQKTKKVNKSWKD 79
K Q+TK+ K D
Sbjct: 183 TK--QETKQQRKGNSD 142
>TC206106 weakly similar to UP|Q7RK82 (Q7RK82) Maebl (Fragment), partial (7%)
Length = 1040
Score = 29.3 bits (64), Expect = 2.6
Identities = 21/93 (22%), Positives = 42/93 (44%), Gaps = 3/93 (3%)
Frame = +3
Query: 5 LTLHLWNPPPRFYTPSLSTKPPLS---ISATSSPELLTAKERRRLRNERRESNATNWKEE 61
L+ H W P+ +PPL + + +L K + +L+ ++ S W+++
Sbjct: 225 LSNHPWPRNPK-------NQPPLKKWCLFLRTRHQLPNLKLKLKLKQMQKASKKW-WRKQ 380
Query: 62 VENKLIQKTKKVNKSWKDELNLDNLMKLGPQWW 94
+++ KT+ N K +L L + K +WW
Sbjct: 381 RRPRVV*KTRFPNLKLKLKLKLKQMQKASKKWW 479
>TC216018 homologue to UP|O04720 (O04720) Cysteine proteinase inhibitor,
complete
Length = 1064
Score = 29.3 bits (64), Expect = 2.6
Identities = 11/27 (40%), Positives = 20/27 (73%)
Frame = -2
Query: 41 KERRRLRNERRESNATNWKEEVENKLI 67
+ERR+ R RR+SNA+ WK + ++ ++
Sbjct: 130 EERRK*RERRRKSNASQWKSKKKSLML 50
>TC216677 similar to GB|AAS58514.1|45357110|AY550303 MYB transcription factor
{Arabidopsis thaliana;} , partial (51%)
Length = 1373
Score = 29.3 bits (64), Expect = 2.6
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +3
Query: 11 NPPPRFYTP-----SLSTKPPL-SISATSSPELLTAKERRRLRNERRESNAT-NWKEEVE 63
NPP FY +L KPP S+SA ++ + +++R + + NW E
Sbjct: 78 NPPEGFYLDPSGGMALPGKPPFASVSAAAAAANSSEDAAKKIRKPYTITKSRENWTEPEH 257
Query: 64 NKLIQKTKKVNKSWK 78
+K ++ + ++ WK
Sbjct: 258 DKFLEAIQLFDRDWK 302
>TC227415 similar to UP|Q9LVD9 (Q9LVD9) Gb|AAC28507.1, partial (89%)
Length = 1748
Score = 28.9 bits (63), Expect = 3.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 9 LWNPPPRFYTPSLSTKPPLSISATSS 34
+W+PPP S S+ PPL S+TSS
Sbjct: 236 VWDPPPGSS*SSSSSSPPLPSSSTSS 313
>TC221939 similar to UP|Q8GSM9 (Q8GSM9) Squalene monooxygenase 2 , partial
(7%)
Length = 695
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/38 (44%), Positives = 20/38 (51%)
Frame = +2
Query: 14 PRFYTPSLSTKPPLSISATSSPELLTAKERRRLRNERR 51
PR Y S+S K + +SPE TAK RRR R R
Sbjct: 533 PRTYGSSISVKQ----NRETSPENATAKRRRRRRRNER 634
>CA938733 similar to PIR|T07139|T071 cysteine proteinase inhibitor -
soybean, partial (28%)
Length = 408
Score = 28.5 bits (62), Expect = 4.4
Identities = 11/21 (52%), Positives = 16/21 (75%)
Frame = -1
Query: 41 KERRRLRNERRESNATNWKEE 61
+ERR+ R RR+SNA+ WK +
Sbjct: 66 EERRK*RERRRKSNASQWKSK 4
>TC203793 similar to PIR|T02602|T02602 vacuolar sorting receptor protein
homolog At2g14740 - Arabidopsis thaliana {Arabidopsis
thaliana;} , partial (31%)
Length = 711
Score = 28.5 bits (62), Expect = 4.4
Identities = 25/97 (25%), Positives = 44/97 (44%), Gaps = 3/97 (3%)
Frame = +2
Query: 194 VAEDDMEAIFKQAKVEQENADKAFEE---EEKKAAVNSGNPNKELESDVSKAIVDSKPKR 250
V + + K+ K ++ AD E + KK G+PN + E+ V K D++ +
Sbjct: 134 VTDFQIRCPMKEKKYNKKCADAVIESLGLDIKKIERCMGDPNADSENPVLKEEQDAQVGK 313
Query: 251 GSRKTSNQLTITEEASSAKKKPKLVTGSTVQIISGSF 287
GSR L T ++ + + KL G+ ++ I F
Sbjct: 314 GSRGDVTILP-TLVVNNRQYRGKLEKGAVMKAICAGF 421
>BM887094 similar to GP|13265463|gb| AT4g27350 {Arabidopsis thaliana},
partial (20%)
Length = 429
Score = 28.5 bits (62), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (45%), Gaps = 5/45 (11%)
Frame = -2
Query: 12 PPPRFYTPSLSTKPP-----LSISATSSPELLTAKERRRLRNERR 51
PP + TP+ T PP S S P+ A RRR R+ RR
Sbjct: 290 PPVKSRTPATRTSPPPPGPRASAPPMSGPQSPRAARRRRRRHRRR 156
>TC228275 weakly similar to UP|Q9M3D0 (Q9M3D0) Lipase-like protein, partial
(25%)
Length = 1153
Score = 28.1 bits (61), Expect = 5.7
Identities = 13/29 (44%), Positives = 18/29 (61%)
Frame = +3
Query: 12 PPPRFYTPSLSTKPPLSISATSSPELLTA 40
PP F TPS ++KPP + S+ S L T+
Sbjct: 60 PPKAFATPSPTSKPPTAKSSPSPSSLSTS 146
>TC215938 similar to UP|Q940M0 (Q940M0) At1g63980/F22C12_9, partial (60%)
Length = 1505
Score = 28.1 bits (61), Expect = 5.7
Identities = 33/159 (20%), Positives = 58/159 (35%), Gaps = 25/159 (15%)
Frame = +3
Query: 21 LSTKPPLSISATSSPELLTAKERRRLRNERRESNATNWKEEVENKLIQKTKKVNKSWKDE 80
+ TKP + + S T + R R ER + + +++E L++K + +
Sbjct: 330 VETKPSVPVGNEHSVSKTTRPQGRYTRRERGKLVSQYSLKDLEGILVKKGDISGSTDNSD 509
Query: 81 LNLDNLMK---------------LGPQWWGVRVSRVKGQYT-AEALAR--------SLAK 116
LD L + P WWG + V G + AE+ +
Sbjct: 510 GELDMLKTSEIQKFEDEGSKYPAIPPDWWGYKYGFVSGGFLGAESKKKKSMISGKAERTA 689
Query: 117 FFPDIEFKVYAPAIHEKKRLKSGSISVKSKP-LFPGCIF 154
FF + + +Y + EK + +K +P GC F
Sbjct: 690 FFEEDQENLY-NLVQEKSTTGKQGLGIKDRPKKVAGCYF 803
>TC221115 similar to UP|Q9MSB5 (Q9MSB5) Phosphoenolpyruvate/phosphate
translocator, partial (18%)
Length = 515
Score = 27.7 bits (60), Expect = 7.4
Identities = 12/31 (38%), Positives = 19/31 (60%)
Frame = +3
Query: 4 MLTLHLWNPPPRFYTPSLSTKPPLSISATSS 34
+L LHL N P +TPS+ +PP +A ++
Sbjct: 189 LLILHLSNSLPHTFTPSMPEQPPCRRAAPAT 281
>TC232450 weakly similar to UP|Q8W2K5 (Q8W2K5) Phragmoplastin-interacting
protein PHIP1, partial (4%)
Length = 481
Score = 27.7 bits (60), Expect = 7.4
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 13 PPRFYTPSLSTKPPLSISATSSPELLTAKERRRLRNER--RESNATNWKEEVENKLIQKT 70
PP F + ++ L SAT +P ++RR+LR+++ ++ N N + E + +KT
Sbjct: 136 PPSFSINNNNSLKTLLDSATPTPRFFKREKRRKLRSDQPPQQPNKEN-ETETQGSPNKKT 312
Query: 71 KK 72
K+
Sbjct: 313 KR 318
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.311 0.129 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,828,174
Number of Sequences: 63676
Number of extensions: 168048
Number of successful extensions: 1315
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of query: 329
length of database: 12,639,632
effective HSP length: 98
effective length of query: 231
effective length of database: 6,399,384
effective search space: 1478257704
effective search space used: 1478257704
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Medicago: description of AC144474.7