BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144343.7 - phase: 0
(480 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC217649 similar to UP|Q9FG87 (Q9FG87) Beta-ketoacyl-CoA synthas... 313 8e-86
TC207497 similar to UP|Q9LN49 (Q9LN49) F18O14.21, partial (80%) 311 3e-85
TC226522 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty aci... 310 9e-85
TC206109 similar to UP|Q8VWP9 (Q8VWP9) Fiddlehead-like protein, ... 310 1e-84
TC230600 similar to UP|Q9LN49 (Q9LN49) F18O14.21, partial (60%) 287 6e-78
TC222174 similar to UP|Q84VI8 (Q84VI8) Beta-ketoacyl-CoA-synthas... 189 2e-48
TC211403 similar to PIR|F86141|F86141 protein T25K16.11 [importe... 170 1e-42
TC218953 similar to UP|Q84UX3 (Q84UX3) Fatty acid elongase (Frag... 145 3e-35
TC218954 similar to UP|Q9FV67 (Q9FV67) Fatty acid elongase 1-lik... 144 1e-34
TC218955 similar to UP|Q9FV67 (Q9FV67) Fatty acid elongase 1-lik... 137 1e-32
CD412949 similar to PIR|T48449|T484 fatty acid elongase-like pro... 117 1e-26
TC233352 similar to UP|Q9FG87 (Q9FG87) Beta-ketoacyl-CoA synthas... 115 4e-26
CA801688 106 2e-23
TC234478 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty aci... 97 2e-20
BM188086 similar to GP|18447765|gb fiddlehead-like protein {Goss... 92 7e-19
TC231909 62 6e-17
TC206110 similar to UP|Q84K36 (Q84K36) Fiddlehead-like protein, ... 81 1e-15
TC226524 similar to UP|Q8VYJ5 (Q8VYJ5) At1g68530/T26J14_10, part... 62 7e-10
TC226521 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty aci... 59 4e-09
AW423549 similar to PIR|F86327|F863 protein F18O14.21 [imported]... 46 3e-05
>TC217649 similar to UP|Q9FG87 (Q9FG87) Beta-ketoacyl-CoA synthase
(AT5g43760/MQD19_11), partial (68%)
Length = 1403
Score = 313 bits (803), Expect = 8e-86
Identities = 165/394 (41%), Positives = 241/394 (60%), Gaps = 4/394 (1%)
Frame = +1
Query: 57 GNNESIGLDECKFFLKAVVNSGIGEETYAPRNFIEGRTVNPTLEDGVEEMEEFCNDSITK 116
G S + F K + SG+G++TY P + P + EE E+ +I +
Sbjct: 7 GLTGSFSEENLSFQKKILERSGLGQKTYLPPAILS-LPPRPCMAAAREEAEQVMFGAIDQ 183
Query: 117 LLNKSGISPSEIDILVVNVSLFSSVPSLTSRIINHYKMREDIKAYNLSGMGCSASLISLD 176
LL K+G+ +I ILVVN SLF+ PSL++ I+NHYK+R ++ +YNL GMGCSA LIS+D
Sbjct: 184 LLAKTGVKAKDIGILVVNCSLFNPTPSLSAMIVNHYKLRGNVFSYNLGGMGCSAGLISID 363
Query: 177 VIQNIFKSEKNKYALLLTSESLSTNWYSGINRSMILANCLFRTGGCAILLTNKRSLKHKA 236
+ +++ + N YAL+++ E+++ NWY G NRSM+++NCLFR GG AILL+N+ +H+A
Sbjct: 364 LAKHLLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCLFRMGGAAILLSNRSGDRHRA 543
Query: 237 ILKLKCLVRTHHGARDDAHNCCSQKEDEQGKLGFYLAKDLPKAATRAFTDNLRVLSPKIL 296
+L VRTH GA D ++ C Q+EDE ++G L+KDL A A N+ L P +L
Sbjct: 544 KYQLVHTVRTHKGADDKSYGCVFQEEDETKRIGVALSKDLMAVAGEALKTNITTLGPLVL 723
Query: 297 PARELLRYMLMSLIKKV----IKYFAPKSAARWFGTSSKSPVNFKTGVDHFVLHTGGKAV 352
P E L + + +KV IK + P +FK +HF +H GG+AV
Sbjct: 724 PMSEQLLFFATLVARKVFKMKIKPYIP---------------DFKLAFEHFCIHAGGRAV 858
Query: 353 IDGIGMSLDLNDYDLEPARMSLHRFGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAG 412
+D + +L+L+D+ +EP+RM+L+RFGNTS+SSLWY L Y EAK R+KKG+R I+ G+G
Sbjct: 859 LDELEKNLELSDWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRIKKGDRTWQIAFGSG 1038
Query: 413 FKCNSCYWEVMRDVVVGDDRNNVWDDCIDYYPPH 446
FKCNS W +R + + NN W D I +P H
Sbjct: 1039FKCNSAVWRALRTINPAKE-NNPWMDEIHDFPVH 1137
>TC207497 similar to UP|Q9LN49 (Q9LN49) F18O14.21, partial (80%)
Length = 1665
Score = 311 bits (798), Expect = 3e-85
Identities = 166/421 (39%), Positives = 253/421 (59%), Gaps = 3/421 (0%)
Frame = +2
Query: 27 RDQECYILNYQCYKPSDERKL---GSVQCGKIIGNNESIGLDECKFFLKAVVNSGIGEET 83
R + Y+L+ C++P+D K + ++ G+ E L+ F K + SG+GEET
Sbjct: 29 RPRAVYLLDSACFRPADHLKAPFRSFMDHSRLTGDFEDSSLE---FQRKILERSGLGEET 199
Query: 84 YAPRNFIEGRTVNPTLEDGVEEMEEFCNDSITKLLNKSGISPSEIDILVVNVSLFSSVPS 143
Y P + P++ E E+ ++ KL + I P +I IL+VN SLF+ PS
Sbjct: 200 YVPEA-MHSIPPQPSMAAARAEAEQVMFGALDKLFQGTNIKPKDIGILIVNCSLFNPTPS 376
Query: 144 LTSRIINHYKMREDIKAYNLSGMGCSASLISLDVIQNIFKSEKNKYALLLTSESLSTNWY 203
L++ I+N YK+R +I+++NL GMGCSA +I++D+ +++ + +N YA+++++E+++ NWY
Sbjct: 377 LSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDLLQVHRNTYAVVVSTENITQNWY 556
Query: 204 SGINRSMILANCLFRTGGCAILLTNKRSLKHKAILKLKCLVRTHHGARDDAHNCCSQKED 263
G +SM++ NCLFR G A+LL+NK + + +A +L +VRTH GA D A C Q++D
Sbjct: 557 FGNKKSMLIPNCLFRVGCSALLLSNKPADRRRAKYRLVHVVRTHRGADDKAFRCVYQEQD 736
Query: 264 EQGKLGFYLAKDLPKAATRAFTDNLRVLSPKILPARELLRYMLMSLIKKVIKYFAPKSAA 323
+ GK G L+KDL A A N+ L P +LP E L + + L+ K+ K
Sbjct: 737 DAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFVTLLMNKLFK-------- 892
Query: 324 RWFGTSSKSPVNFKTGVDHFVLHTGGKAVIDGIGMSLDLNDYDLEPARMSLHRFGNTSAS 383
G P +FK DHF +H GG+AVID + +L L +E +RM+LHRFGNTS+S
Sbjct: 893 --AGVKPYIP-DFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSS 1063
Query: 384 SLWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDVVVGDDRNNVWDDCIDYY 443
S+WY L Y+EAK R+KKG R+ I+ G+GFKCNS W+ +R+ V N W+DCI Y
Sbjct: 1064SIWYELAYIEAKGRIKKGNRIWQIAFGSGFKCNSAVWQALRN--VRPSPNGPWEDCIHKY 1237
Query: 444 P 444
P
Sbjct: 1238P 1240
>TC226522 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty acid condensing
enzyme CUT1, partial (79%)
Length = 1582
Score = 310 bits (794), Expect = 9e-85
Identities = 165/377 (43%), Positives = 239/377 (62%)
Frame = +3
Query: 68 KFFLKAVVNSGIGEETYAPRNFIEGRTVNPTLEDGVEEMEEFCNDSITKLLNKSGISPSE 127
+F ++ + SG+GEET P I PT+E E E ++ L +K+G+ P +
Sbjct: 51 EFQMRILERSGLGEETCLPPA-IHYIPPKPTMEAARGEAELVIFSAMDSLFDKTGLKPKD 227
Query: 128 IDILVVNVSLFSSVPSLTSRIINHYKMREDIKAYNLSGMGCSASLISLDVIQNIFKSEKN 187
IDIL+VN SLFS PSL++ +IN YK+R +IK++NLSGMGCSA LIS+D+ +++ + N
Sbjct: 228 IDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISVDLARDLLQVHPN 407
Query: 188 KYALLLTSESLSTNWYSGINRSMILANCLFRTGGCAILLTNKRSLKHKAILKLKCLVRTH 247
A+++++E ++ N+Y G R+M+L NCLFR GG AILL+N+ S + +A +L +VRTH
Sbjct: 408 SNAVVVSTEIITPNYYQGKERAMLLPNCLFRMGGAAILLSNRTSERRRAKYRLVHVVRTH 587
Query: 248 HGARDDAHNCCSQKEDEQGKLGFYLAKDLPKAATRAFTDNLRVLSPKILPARELLRYMLM 307
GA D A+ C ++ED +GK+G L KDL A A N+ + P +LPA E L ++L
Sbjct: 588 KGADDKAYRCVFEEEDREGKVGISLQKDLMAIAGEALKSNITTMGPLVLPASEQLLFLLT 767
Query: 308 SLIKKVIKYFAPKSAARWFGTSSKSPVNFKTGVDHFVLHTGGKAVIDGIGMSLDLNDYDL 367
+ +K+ F PK W +FK +HF +H GG+AVID + +L L+ +
Sbjct: 768 LIGRKI---FNPK----W----KPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSTEHV 914
Query: 368 EPARMSLHRFGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDVV 427
E +RM+LHRFGNTS+SSLWY L Y+E+K R+KKG+RV I+ G+GFKCNS W+ R +
Sbjct: 915 EASRMTLHRFGNTSSSSLWYELNYIESKGRMKKGDRVWQIAFGSGFKCNSAVWKCNRSIK 1094
Query: 428 VGDDRNNVWDDCIDYYP 444
D W DCID YP
Sbjct: 1095TPVD--GPWADCIDRYP 1139
>TC206109 similar to UP|Q8VWP9 (Q8VWP9) Fiddlehead-like protein, partial
(95%)
Length = 1887
Score = 310 bits (793), Expect = 1e-84
Identities = 159/420 (37%), Positives = 251/420 (58%), Gaps = 2/420 (0%)
Frame = +1
Query: 27 RDQECYILNYQCYKPSDERKLGSVQCGKIIGNNESIGLDECKFFLKAVVNSGIGEETYAP 86
R + Y++++ CYKP DE K+ Q ++ + +F + +++SGIG+ETY P
Sbjct: 436 RPRPIYLIDFACYKPDDELKVSREQLMEVARKSGKFDEASLEFQKRMLMSSGIGDETYIP 615
Query: 87 RNFIEGRTVNPTLEDGVEEMEEFCNDSITKLLNKSGISPSEIDILVVNVSLFSSVPSLTS 146
+ I T+++G E ++ +L K+ + P ++ +LVVN S+F+ PSL++
Sbjct: 616 KAVIASTENTATMKEGRAEASMVMFGALDELFEKTRVRPKDVGVLVVNCSIFNPTPSLSA 795
Query: 147 RIINHYKMREDIKAYNLSGMGCSASLISLDVIQNIFKSEKNKYALLLTSESLSTNWYSGI 206
IINHYKMR +I +YNL GMGCSA +I +D+ ++I ++ N YA ++++E + NWY G
Sbjct: 796 MIINHYKMRGNILSYNLGGMGCSAGIIGVDLAKDILQANPNNYAEVVSTEMVGYNWYQGK 975
Query: 207 NRSMILANCLFRTGGCAILLTNKRSLKHKAILKLKCLVRTHHGARDDAHNCCSQKEDEQG 266
+RSM++ N FR G A+LL+N+R +A +L+ +VRTH GA D + C Q+EDEQ
Sbjct: 976 DRSMLIPNSFFRMGCSAVLLSNRRRDYSRAKYRLEHIVRTHKGADDRSFRCVYQEEDEQK 1155
Query: 267 KLGFYLAKDLPKAATRAFTDNLRVLSPKILPARELLRYMLMSLIKKVIKYFAPKSAARWF 326
G ++KDL + A N+ L P +LP E L + + + + F K+
Sbjct: 1156LKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHL---FGSKNGGN-- 1320
Query: 327 GTSSKSPV--NFKTGVDHFVLHTGGKAVIDGIGMSLDLNDYDLEPARMSLHRFGNTSASS 384
S K P ++K +HF +H K ++D + +L+L+D ++E +RM+LHRFGNTS+SS
Sbjct: 1321SPSMKKPYIPDYKLAFEHFCVHAASKTILDELQRNLELSDKNIEASRMTLHRFGNTSSSS 1500
Query: 385 LWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDVVVGDDRNNVWDDCIDYYP 444
+WY L YMEAK+ +++G+RV ++ G+GFKCNS W MR V N W DCI+ YP
Sbjct: 1501IWYELAYMEAKESVRRGDRVWQLAFGSGFKCNSVVWRAMRRVT--KPSRNPWLDCINRYP 1674
>TC230600 similar to UP|Q9LN49 (Q9LN49) F18O14.21, partial (60%)
Length = 1007
Score = 287 bits (735), Expect = 6e-78
Identities = 145/325 (44%), Positives = 208/325 (63%), Gaps = 1/325 (0%)
Frame = +3
Query: 123 ISPSEIDILVVNVSLFSSVPSLTSRIINHYKMREDIKAYNLSGMGCSASLISLDVIQNIF 182
++P +I ILVVN +LF+ PSL+S I+N YK+R + K++NL GMGCSA +I++D+ +++
Sbjct: 3 VNPKDIGILVVNCNLFNPTPSLSSMIVNKYKLRGNAKSFNLGGMGCSAGVIAIDLAKDML 182
Query: 183 KSEKNKYALLLTSESLSTNWYSGINRSMILANCLFRTGGCAILLTNKRSLKHKAILKLKC 242
+ N YA+++++++++ NWY G N++M++ NCLFR GG AILL+NK S + +A KL
Sbjct: 183 QVHPNTYAVVVSTKNITQNWYFGNNKAMLIPNCLFRVGGAAILLSNKSSDRARAKYKLVH 362
Query: 243 LVRTHHGARDDAHNCCSQKEDEQGKLGFYLAKDLPKAATRAFTDNLRVLSPKILPARELL 302
+VRTH GA D A C Q++DE GK G L+KDL A A N+ L P +LP E
Sbjct: 363 VVRTHKGADDKAFRCVYQEQDEVGKTGVSLSKDLMAIAGGALMTNITTLGPLVLPISEQF 542
Query: 303 RYMLMSLIKKVIKYFAPKSAARWFGTSSKSPV-NFKTGVDHFVLHTGGKAVIDGIGMSLD 361
+ L ++KK+ F K + +FK DHF +H GG+AVID + +L
Sbjct: 543 LFFLTLVVKKL------------FNAKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQ 686
Query: 362 LNDYDLEPARMSLHRFGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWE 421
L +E +RM+LHRFGNTS+SS+WY L Y EAK R++KG RV I+ G+GFKCNS WE
Sbjct: 687 LRPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRIRKGHRVWQIAFGSGFKCNSAVWE 866
Query: 422 VMRDVVVGDDRNNVWDDCIDYYPPH 446
+R V N W++CI YP H
Sbjct: 867 ALRH--VNPSPNTPWENCIHRYPVH 935
>TC222174 similar to UP|Q84VI8 (Q84VI8) Beta-ketoacyl-CoA-synthase, partial
(43%)
Length = 701
Score = 189 bits (480), Expect = 2e-48
Identities = 95/220 (43%), Positives = 143/220 (64%)
Frame = +1
Query: 96 NPTLEDGVEEMEEFCNDSITKLLNKSGISPSEIDILVVNVSLFSSVPSLTSRIINHYKMR 155
NP++++ +E E +I +L K+ + P +I IL+VN SLF PSL++ IINHYK+R
Sbjct: 13 NPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFCPTPSLSAMIINHYKLR 192
Query: 156 EDIKAYNLSGMGCSASLISLDVIQNIFKSEKNKYALLLTSESLSTNWYSGINRSMILANC 215
+IK+ NL GMGCSA LIS+D+ +++ + N YAL++++E+++ NWYSG +RS +++NC
Sbjct: 193 GNIKSLNLGGMGCSAGLISIDLAKDLLQVHPNSYALVVSTENITLNWYSGNDRSKLVSNC 372
Query: 216 LFRTGGCAILLTNKRSLKHKAILKLKCLVRTHHGARDDAHNCCSQKEDEQGKLGFYLAKD 275
LFR GG AILL+NK S + ++ +L VRT+ G+ D C Q+ED GK+G L+KD
Sbjct: 373 LFRMGGAAILLSNKGSDRRRSKYQLVDTVRTNKGSDDKCFGCVVQEEDSNGKIGVTLSKD 552
Query: 276 LPKAATRAFTDNLRVLSPKILPARELLRYMLMSLIKKVIK 315
L A A N+ L P +LP E L + + KK+ K
Sbjct: 553 LMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFK 672
>TC211403 similar to PIR|F86141|F86141 protein T25K16.11 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(29%)
Length = 644
Score = 170 bits (430), Expect = 1e-42
Identities = 84/192 (43%), Positives = 122/192 (62%), Gaps = 1/192 (0%)
Frame = +1
Query: 256 NCCSQKEDEQGKLGFYLAKDLPKAATRAFTDNLRVLSPKILPARELLRYMLMSLIKKVIK 315
NC QKED+ GK+G LA++L A A N+ L P +LP E + +++ + +KV+K
Sbjct: 1 NCVYQKEDQSGKIGVCLARELMAVAGEALKTNITTLGPLVLPYSEQVMFLVSLVRRKVLK 180
Query: 316 YFAPKSAARWFGTSSKSPVNFKTGVDHFVLHTGGKAVIDGIGMSLDLNDYDLEPARMSLH 375
K +FK ++HF +H GG+AV+D + +L+L+++ +EP+RM+LH
Sbjct: 181 MSGVKPYIP----------DFKLALEHFCIHAGGRAVLDELQKNLELSEWHMEPSRMTLH 330
Query: 376 RFGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDV-VVGDDRNN 434
RFGNTS+SSLWY L Y EAK R+ KG+RV I+ G+GFKCNS W+ +RD+ + D R N
Sbjct: 331 RFGNTSSSSLWYELAYTEAKGRVSKGDRVWQIAFGSGFKCNSAVWKAVRDMPFLKDWRGN 510
Query: 435 VWDDCIDYYPPH 446
WDD I+ YP H
Sbjct: 511 PWDDSINNYPGH 546
>TC218953 similar to UP|Q84UX3 (Q84UX3) Fatty acid elongase (Fragment),
partial (73%)
Length = 973
Score = 145 bits (367), Expect = 3e-35
Identities = 77/192 (40%), Positives = 111/192 (57%), Gaps = 4/192 (2%)
Frame = +1
Query: 257 CCSQKEDEQGKLGFYLAKDLPKAATRAFTDNLRVLSPKILPARELLRYMLMSLIKKV--- 313
C +Q ED GK+G L+KDL A N+ L P +LP E L + + KK+
Sbjct: 19 CVTQXEDANGKVGVTLSKDLXXVXGDALKTNITTLGPLVLPTSEQLLFFATLVGKKIFKM 198
Query: 314 -IKYFAPKSAARWFGTSSKSPVNFKTGVDHFVLHTGGKAVIDGIGMSLDLNDYDLEPARM 372
IK + P +FK +HF +H GG+AV+D + +L L+ + +EP+RM
Sbjct: 199 KIKPYIP---------------DFKLAFEHFCIHAGGRAVLDELEKNLQLSPWHMEPSRM 333
Query: 373 SLHRFGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDVVVGDDR 432
+L+RFGNTS+SSLWY L Y EAK R+KKG+R I+ G+GFKCNS W+ +R + ++
Sbjct: 334 TLYRFGNTSSSSLWYELAYTEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTINPAKEK 513
Query: 433 NNVWDDCIDYYP 444
+ W D ID +P
Sbjct: 514 -SPWIDEIDQFP 546
>TC218954 similar to UP|Q9FV67 (Q9FV67) Fatty acid elongase 1-like protein,
partial (36%)
Length = 647
Score = 144 bits (362), Expect = 1e-34
Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 4/192 (2%)
Frame = +2
Query: 257 CCSQKEDEQGKLGFYLAKDLPKAATRAFTDNLRVLSPKILPARELLRYMLMSLIKKV--- 313
C +Q+ED K+G L+KDL A N+ L P +LP E L + + KK+
Sbjct: 11 CVTQEEDXNXKVGVALSKDLXXVXGDALKTNITTLGPLVLPTSEQLLFFATLVAKKIFKM 190
Query: 314 -IKYFAPKSAARWFGTSSKSPVNFKTGVDHFVLHTGGKAVIDGIGMSLDLNDYDLEPARM 372
IK + P +FK +HF +H GG+AV+D + +L L+ + +EP+RM
Sbjct: 191 KIKPYIP---------------DFKLAFEHFCIHAGGRAVLDELEKNLQLSPWHMEPSRM 325
Query: 373 SLHRFGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDVVVGDDR 432
+L+RFGNTS+SSLWY L Y EAK R+K+G+R I+ G+GFKCNS W+ +R + ++
Sbjct: 326 TLYRFGNTSSSSLWYELAYTEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTINPSKEK 505
Query: 433 NNVWDDCIDYYP 444
+ W D ID +P
Sbjct: 506 -SPWIDEIDQFP 538
>TC218955 similar to UP|Q9FV67 (Q9FV67) Fatty acid elongase 1-like protein,
partial (26%)
Length = 401
Score = 137 bits (345), Expect = 1e-32
Identities = 62/132 (46%), Positives = 95/132 (71%)
Frame = +3
Query: 149 INHYKMREDIKAYNLSGMGCSASLISLDVIQNIFKSEKNKYALLLTSESLSTNWYSGINR 208
+NHYK+R +IK+YNL GMGCSA LIS+D+ +++ ++ N YAL+++ E+++ NWY G +R
Sbjct: 6 VNHYKLRGNIKSYNLGGMGCSAGLISIDLAKDLLQANPNSYALVISMENITLNWYFGNDR 185
Query: 209 SMILANCLFRTGGCAILLTNKRSLKHKAILKLKCLVRTHHGARDDAHNCCSQKEDEQGKL 268
S +++NCL R GG A+LL+NK S + ++ +L VRTH GA + +C +Q+ED GK+
Sbjct: 186 SKLVSNCLVRMGGAAVLLSNKSSDRRRSKYRLVTTVRTHKGADEKCFSCVTQEEDANGKV 365
Query: 269 GFYLAKDLPKAA 280
G L+KDL A
Sbjct: 366 GVTLSKDLMAVA 401
>CD412949 similar to PIR|T48449|T484 fatty acid elongase-like protein -
Arabidopsis thaliana, partial (12%)
Length = 396
Score = 117 bits (293), Expect = 1e-26
Identities = 61/97 (62%), Positives = 72/97 (73%)
Frame = -3
Query: 356 IGMSLDLNDYDLEPARMSLHRFGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAGFKC 415
+G L LN+YDLEPARM+LH +GNTSA LWYVLGYMEA+KRLKKG+R+LMISLGAGF
Sbjct: 388 VGKGLRLNEYDLEPARMALHPWGNTSAGGLWYVLGYMEAQKRLKKGDRILMISLGAGFSA 209
Query: 416 NSCYWEVMRDVVVGDDRNNVWDDCIDYYPPHSLANPF 452
C VMRD+ NVW D I+ YPP++L PF
Sbjct: 208 PLCL-GVMRDL----SDTNVWKDFIESYPPNTL-TPF 116
>TC233352 similar to UP|Q9FG87 (Q9FG87) Beta-ketoacyl-CoA synthase
(AT5g43760/MQD19_11), partial (26%)
Length = 417
Score = 115 bits (288), Expect = 4e-26
Identities = 57/138 (41%), Positives = 86/138 (62%)
Frame = +1
Query: 176 DVIQNIFKSEKNKYALLLTSESLSTNWYSGINRSMILANCLFRTGGCAILLTNKRSLKHK 235
D+ + + + N YAL+++ E+++ NWY G NRSM+++NCLFR GG A+LL+NK S + +
Sbjct: 1 DLAKQLLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCLFRMGGAAVLLSNKSSDRRR 180
Query: 236 AILKLKCLVRTHHGARDDAHNCCSQKEDEQGKLGFYLAKDLPKAATRAFTDNLRVLSPKI 295
A +L VRTH GA D ++ C Q+EDE+ +G L+KDL A A N+ L P +
Sbjct: 181 AKYQLIHTVRTHKGADDKSYGCVFQEEDEKKTIGVALSKDLMAVAGEALKTNITTLGPLV 360
Query: 296 LPARELLRYMLMSLIKKV 313
LP E L + + +KV
Sbjct: 361 LPMSEQLLFFATLVARKV 414
>CA801688
Length = 447
Score = 106 bits (265), Expect = 2e-23
Identities = 60/158 (37%), Positives = 92/158 (57%)
Frame = +1
Query: 211 ILANCLFRTGGCAILLTNKRSLKHKAILKLKCLVRTHHGARDDAHNCCSQKEDEQGKLGF 270
+L NCLFR GG AILL+N++ + +A +L +VRTH G+ + A C ++ED++GK+G
Sbjct: 1 LLPNCLFRMGGAAILLSNRKQERKRAKYRLVHVVRTHKGSNEKAFRCVFEEEDKEGKVGI 180
Query: 271 YLAKDLPKAATRAFTDNLRVLSPKILPARELLRYMLMSLIKKVIKYFAPKSAARWFGTSS 330
L+KDL A A N+ + P +LPA E L ++L + +K+ F P RW
Sbjct: 181 SLSKDLMAIAGEALKSNITSMGPLVLPASEQLLFLLTLIGRKI---FNP----RW----K 327
Query: 331 KSPVNFKTGVDHFVLHTGGKAVIDGIGMSLDLNDYDLE 368
+FK +HF +H GG+AVID + +L L+ +E
Sbjct: 328 PYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVE 441
>TC234478 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty acid condensing
enzyme CUT1, partial (18%)
Length = 307
Score = 96.7 bits (239), Expect = 2e-20
Identities = 44/80 (55%), Positives = 56/80 (70%)
Frame = +3
Query: 367 LEPARMSLHRFGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDV 426
+E +RM+LHRFGNTS+SSLWY L Y+E+K R+K+G+RV I+ G+GFKCNS W R +
Sbjct: 18 VEASRMTLHRFGNTSSSSLWYELNYIESKGRMKRGDRVWQIAFGSGFKCNSAVWRCNRSI 197
Query: 427 VVGDDRNNVWDDCIDYYPPH 446
D W DCID YP H
Sbjct: 198 QTPFD--GPWADCIDRYPVH 251
>BM188086 similar to GP|18447765|gb fiddlehead-like protein {Gossypium
hirsutum}, partial (25%)
Length = 406
Score = 91.7 bits (226), Expect = 7e-19
Identities = 44/132 (33%), Positives = 76/132 (57%)
Frame = +3
Query: 27 RDQECYILNYQCYKPSDERKLGSVQCGKIIGNNESIGLDECKFFLKAVVNSGIGEETYAP 86
R + Y++++ CYKP DE K+ Q ++ + +F + +++SGIG+ETY P
Sbjct: 6 RPRPIYLIDFACYKPDDELKVSREQLMEVARKSGKFDEASLEFQKRMLMSSGIGDETYIP 185
Query: 87 RNFIEGRTVNPTLEDGVEEMEEFCNDSITKLLNKSGISPSEIDILVVNVSLFSSVPSLTS 146
+ + T+++G E ++ +L KS + P ++ +LVVN S+F+ PSL++
Sbjct: 186 KAVVASTENTATMKEGRGEASMVMFGALDELFEKSRVRPKDVGVLVVNCSIFNPTPSLSA 365
Query: 147 RIINHYKMREDI 158
IINHYKMR +I
Sbjct: 366 MIINHYKMRGNI 401
>TC231909
Length = 616
Score = 61.6 bits (148), Expect(2) = 6e-17
Identities = 26/42 (61%), Positives = 29/42 (68%)
Frame = +1
Query: 410 GAGFKCNSCYWEVMRDVVVGDDRNNVWDDCIDYYPPHSLANP 451
GAGFKCNSC WEVM+D+ NVWDDCID YPP + P
Sbjct: 4 GAGFKCNSCLWEVMKDL----GEANVWDDCIDEYPPRVIGQP 117
Score = 43.9 bits (102), Expect(2) = 6e-17
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +2
Query: 447 SLANPFMEKYGWINNIQDPSTFKLKLAEFL 476
SLANPFME YGWIN + DP T++ L EFL
Sbjct: 104 SLANPFMEAYGWINEVDDPYTYE-HLPEFL 190
>TC206110 similar to UP|Q84K36 (Q84K36) Fiddlehead-like protein, partial
(12%)
Length = 479
Score = 80.9 bits (198), Expect = 1e-15
Identities = 36/68 (52%), Positives = 47/68 (68%)
Frame = +2
Query: 377 FGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDVVVGDDRNNVW 436
FGNTS+SS+WY L YMEAK+ +++G+RV ++ G+GFKCNS W MR V N W
Sbjct: 8 FGNTSSSSIWYELAYMEAKESVRRGDRVWQLAFGSGFKCNSVVWRAMRRVT--KPSRNPW 181
Query: 437 DDCIDYYP 444
DCI+ YP
Sbjct: 182 LDCINRYP 205
>TC226524 similar to UP|Q8VYJ5 (Q8VYJ5) At1g68530/T26J14_10, partial (39%)
Length = 608
Score = 61.6 bits (148), Expect = 7e-10
Identities = 46/144 (31%), Positives = 70/144 (47%), Gaps = 3/144 (2%)
Frame = +3
Query: 4 LTLLFIFTTMHLCFLIWKKFDQRRDQECYILNYQCYKPSDERKLGSVQCGKIIGNNESIG 63
L L+ I + L I + + + Y+++Y C+KP + V + ++ I
Sbjct: 189 LDLVQILCSAFLIIFIATVYFMSKPRTIYLVDYACFKPPVTCR---VPFATFMEHSRLIL 359
Query: 64 LDECK---FFLKAVVNSGIGEETYAPRNFIEGRTVNPTLEDGVEEMEEFCNDSITKLLNK 120
D K F ++ + SG+GEET P I PT+E E E ++ L K
Sbjct: 360 KDNPKSVEFQMRILERSGLGEETCLPPA-IHYIPPKPTMEAARGEAELVIFSAMDSLFTK 536
Query: 121 SGISPSEIDILVVNVSLFSSVPSL 144
+G+ P +IDIL+VN SLFSS PSL
Sbjct: 537 TGLKPKDIDILIVNCSLFSSTPSL 608
>TC226521 similar to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty acid condensing
enzyme CUT1, partial (12%)
Length = 601
Score = 59.3 bits (142), Expect = 4e-09
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +3
Query: 392 MEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDVVVGDDRNNVWDDCIDYYPPH 446
+E+K R+KKG+RV I+ G+GFKCNS W+ R + D W DCID YP H
Sbjct: 3 IESKGRMKKGDRVWQIAFGSGFKCNSAVWKCNRSIKTPVD--GPWADCIDRYPVH 161
>AW423549 similar to PIR|F86327|F863 protein F18O14.21 [imported] -
Arabidopsis thaliana, partial (7%)
Length = 240
Score = 46.2 bits (108), Expect = 3e-05
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 407 ISLGAGFKCNSCYWEVMRDVVVGDDRNNVWDDCIDYYP 444
I+ G+GFKCNS W+ +R+ V N W+DCID YP
Sbjct: 6 IAFGSGFKCNSAVWQALRN--VRPSPNGPWEDCIDKYP 113
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.322 0.138 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,900,538
Number of Sequences: 63676
Number of extensions: 355228
Number of successful extensions: 1737
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of query: 480
length of database: 12,639,632
effective HSP length: 101
effective length of query: 379
effective length of database: 6,208,356
effective search space: 2352966924
effective search space used: 2352966924
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC144343.7