Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC143341.6 + phase: 0 
         (683 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC222041 similar to UP|Q8LBQ6 (Q8LBQ6) Isp4-like protein, partia...   362  e-100
BQ080748 weakly similar to PIR|T08925|T08 isp4 protein homolog T...   270  2e-72
BM085219 weakly similar to GP|9758213|dbj sexual differentiation...   260  2e-69
TC222979 similar to UP|Q8H0V0 (Q8H0V0) Isp4 like protein, partia...   236  2e-62
CO978558                                                              214  8e-56
AW310775 weakly similar to PIR|T08925|T08 isp4 protein homolog T...   196  2e-50
AI736639                                                              186  3e-47
BG839504 similar to GP|20466754|gb Isp4-like protein {Arabidopsi...   104  2e-23
TC213712 similar to UP|Q9LWW1 (Q9LWW1) ESTs D25093(R3139) (Gluta...   105  7e-23
TC223528 weakly similar to UP|Q8H0V0 (Q8H0V0) Isp4 like protein,...    69  5e-12
AI959812                                                               67  3e-11
CK605780                                                               63  4e-10
TC206603 similar to UP|Q9LSD4 (Q9LSD4) Gb|AAF23830.1, partial (47%)    38  0.017
TC206604 similar to UP|Q9LSD4 (Q9LSD4) Gb|AAF23830.1, partial (37%)    36  0.049
TC221285 similar to UP|Q6R3L0 (Q6R3L0) Metal-nicotianamine trans...    32  0.93
TC224807 homologue to PRF|1909359A.0|445612|1909359A ribosomal p...    32  1.2
TC224409 similar to UP|POT6_ARATH (Q8W4I4) Potassium transporter...    31  1.6
TC224272 similar to UP|Q94XD8 (Q94XD8) Cytochrome oxidase subuni...    31  1.6
TC224701 homologue to PRF|1909359A.0|445612|1909359A ribosomal p...    31  1.6
TC207802 similar to UP|Q6R3L0 (Q6R3L0) Metal-nicotianamine trans...    31  1.6

>TC222041 similar to UP|Q8LBQ6 (Q8LBQ6) Isp4-like protein, partial (38%)
          Length = 1012

 Score =  362 bits (929), Expect = e-100
 Identities = 159/284 (55%), Positives = 208/284 (72%), Gaps = 2/284 (0%)
 Frame = +2

Query: 400 IALVFTLPIGVIEATTSARTGLNVITELVIGFTYPGKPLANVAFKTYGHTSMVQALGFLG 459
           +A  FTLPI +I ATT+   GLN+ITE V G  YPG+P+ANV FKTYG+ SM QA+ FL 
Sbjct: 2   LAFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLS 181

Query: 460 DFKLGHYMKIPPKSMFIVQLVGTVVSLSVHFGTAWWLLTSIENICDESLLPKGSPWTCPG 519
           DFKLGHYMKIPP+SMF+VQ +GT+++ +++ G AWWLL SI+NIC + LLP+GSPWTCPG
Sbjct: 182 DFKLGHYMKIPPRSMFLVQFIGTILAGTINIGVAWWLLNSIKNICHDDLLPEGSPWTCPG 361

Query: 520 DDAFYNASIIWGVVGPKRMFTNDGVYPGMNWFFLIGLIAPVPVWLLSIKFPNHKWIKLIN 579
           D  F++AS+IWG+VGPKR+F + G Y  MNWFFL G + P+ VWLL   FP   WI LIN
Sbjct: 362 DRVFFDASVIWGLVGPKRIFGSQGNYSAMNWFFLGGALGPIIVWLLHKAFPKQSWIPLIN 541

Query: 580 IPIIIVGASTIPPRRSVNYITWGIVGMFFNFYVYRKFRVWWARHTYILSAGLDAGVAFMG 639
           +P+++     +PP   +NY  W  VG  FNF+++R  + WW R+ Y+LSA LD+GVAFM 
Sbjct: 542 LPVLLGATGMMPPATPLNYNAWIFVGTIFNFFIFRYRKKWWQRYNYVLSAALDSGVAFMT 721

Query: 640 LVLYFSLQSYGIFGPT--WWGLEADHCPLARCPTAPGVYAEGCP 681
           ++LYFSL   G+   +  WWG + +HCPLA CPTA G+  +GCP
Sbjct: 722 VMLYFSL---GLENKSLNWWGNDGEHCPLAACPTAKGIIVDGCP 844


>BQ080748 weakly similar to PIR|T08925|T08 isp4 protein homolog T15N24.40 -
           Arabidopsis thaliana, partial (17%)
          Length = 421

 Score =  270 bits (689), Expect = 2e-72
 Identities = 121/139 (87%), Positives = 128/139 (92%)
 Frame = +3

Query: 514 PWTCPGDDAFYNASIIWGVVGPKRMFTNDGVYPGMNWFFLIGLIAPVPVWLLSIKFPNHK 573
           PWTCPGDD FYNASIIWGVVGPKRMFT DGVYPGMNWFFLIGL+AP+PVWLLS KFPNHK
Sbjct: 3   PWTCPGDDVFYNASIIWGVVGPKRMFTKDGVYPGMNWFFLIGLLAPLPVWLLSKKFPNHK 182

Query: 574 WIKLINIPIIIVGASTIPPRRSVNYITWGIVGMFFNFYVYRKFRVWWARHTYILSAGLDA 633
           WI+LIN PIII GAS IPP RSVNYITWGIVG+FFNFYVYRKF+ WWARHTYILSA LDA
Sbjct: 183 WIQLINFPIIIAGASNIPPFRSVNYITWGIVGIFFNFYVYRKFKAWWARHTYILSAALDA 362

Query: 634 GVAFMGLVLYFSLQSYGIF 652
           GVAFMG+ LYF+LQS GIF
Sbjct: 363 GVAFMGVALYFALQSNGIF 419


>BM085219 weakly similar to GP|9758213|dbj sexual differentiation process
           protein ISP4-like {Arabidopsis thaliana}, partial (17%)
          Length = 426

 Score =  260 bits (664), Expect = 2e-69
 Identities = 111/139 (79%), Positives = 126/139 (89%)
 Frame = -2

Query: 520 DDAFYNASIIWGVVGPKRMFTNDGVYPGMNWFFLIGLIAPVPVWLLSIKFPNHKWIKLIN 579
           D+ FYNASIIWGVVGP+RMFT DG+YPGMNWFFLIGL+APVPVWLL+ KFPNHKWI+LIN
Sbjct: 425 DEVFYNASIIWGVVGPQRMFTKDGIYPGMNWFFLIGLLAPVPVWLLARKFPNHKWIELIN 246

Query: 580 IPIIIVGASTIPPRRSVNYITWGIVGMFFNFYVYRKFRVWWARHTYILSAGLDAGVAFMG 639
           +P+II G   IPP RSVNYITWG VG+FFNFYVY KF+ WWARHTYILSA LDAGVAFMG
Sbjct: 245 MPLIIAGGGGIPPARSVNYITWGFVGIFFNFYVYSKFKAWWARHTYILSAALDAGVAFMG 66

Query: 640 LVLYFSLQSYGIFGPTWWG 658
           ++LYF+LQ+YG+FGP WWG
Sbjct: 65  VILYFALQNYGVFGPIWWG 9


>TC222979 similar to UP|Q8H0V0 (Q8H0V0) Isp4 like protein, partial (30%)
          Length = 661

 Score =  236 bits (603), Expect = 2e-62
 Identities = 106/216 (49%), Positives = 145/216 (67%)
 Frame = +2

Query: 435 GKPLANVAFKTYGHTSMVQALGFLGDFKLGHYMKIPPKSMFIVQLVGTVVSLSVHFGTAW 494
           GKP+AN+ FK YG  S V AL FL D KLGHYMKIPP+ M+  QL GT+ +   +   AW
Sbjct: 2   GKPIANLLFKIYGRISTVHALSFLSDLKLGHYMKIPPRCMYTAQLEGTLFAGVENLAVAW 181

Query: 495 WLLTSIENICDESLLPKGSPWTCPGDDAFYNASIIWGVVGPKRMFTNDGVYPGMNWFFLI 554
           W+  SI++IC +  L   SPWTCP     ++AS+IWG++GPKR+F   G+Y  + W FLI
Sbjct: 182 WM*DSIKDICMDDKLHHDSPWTCPKYRVTFDASVIWGLIGPKRLFGPGGLYRNLVWLFLI 361

Query: 555 GLIAPVPVWLLSIKFPNHKWIKLINIPIIIVGASTIPPRRSVNYITWGIVGMFFNFYVYR 614
           G   PVP+W+LS  FP  KWI LINIP+I    + +PP    N  +W + GM FN++V+R
Sbjct: 362 GAELPVPIWVLSKIFPEKKWIPLINIPVITYRFAGMPPATPANIASWLVTGMIFNYFVFR 541

Query: 615 KFRVWWARHTYILSAGLDAGVAFMGLVLYFSLQSYG 650
             + WW ++ Y+LSA LDA  AFMG++++F+LQ+ G
Sbjct: 542 YNKRWWQKYNYVLSAALDAXTAFMGVLIFFALQNAG 649


>CO978558 
          Length = 721

 Score =  214 bits (546), Expect = 8e-56
 Identities = 93/205 (45%), Positives = 137/205 (66%)
 Frame = -2

Query: 478 QLVGTVVSLSVHFGTAWWLLTSIENICDESLLPKGSPWTCPGDDAFYNASIIWGVVGPKR 537
           Q+VGT++S+ ++  TAWWL+ +I ++CD ++L   SPWTCP D+ F++AS+IWG++GP+R
Sbjct: 717 QVVGTILSVFIYTVTAWWLMRTIPHLCDTTMLDPDSPWTCPMDNVFFDASVIWGLLGPRR 538

Query: 538 MFTNDGVYPGMNWFFLIGLIAPVPVWLLSIKFPNHKWIKLINIPIIIVGASTIPPRRSVN 597
           +F + G Y  +N FFL G IAP  VWL    FP  +WI LI++P+++   S +PP  +VN
Sbjct: 537 IFGDLGEYAKVNLFFLGGAIAPFLVWLAHKAFPEQRWITLIHMPVLLGATSMMPPATAVN 358

Query: 598 YITWGIVGMFFNFYVYRKFRVWWARHTYILSAGLDAGVAFMGLVLYFSLQSYGIFGPTWW 657
           + +W +VG    +  YR  + WW R  Y+LS GLDAG AFM ++L+ +L +  I    WW
Sbjct: 357 FTSWILVGFLSGYIAYRYRQEWWKRCNYVLSGGLDAGTAFMTILLFLALNNNNIM-LNWW 181

Query: 658 GLEADHCPLARCPTAPGVYAEGCPV 682
           G   + CPLA CPT  G+  +GCPV
Sbjct: 180 GNNPEGCPLANCPTEKGIVVKGCPV 106


>AW310775 weakly similar to PIR|T08925|T08 isp4 protein homolog T15N24.40 -
           Arabidopsis thaliana, partial (14%)
          Length = 466

 Score =  196 bits (499), Expect = 2e-50
 Identities = 84/113 (74%), Positives = 98/113 (86%), Gaps = 1/113 (0%)
 Frame = -1

Query: 571 NHKWIKLINIPIIIVGASTIPPRRSVNYITWGIVGMFFNFYVYRKFRVWWARHTYILSAG 630
           NHKWI+LIN+P+II G+  IPP RSVNYITWG+VG+ FNFYVY KF+ WWARH YILSA 
Sbjct: 466 NHKWIELINMPLIIAGSGGIPPARSVNYITWGMVGILFNFYVYNKFKAWWARHNYILSAA 287

Query: 631 LDAGVAFMGLVLYFSLQSYGIFGPTWWGLEA-DHCPLARCPTAPGVYAEGCPV 682
           LDAGVAFMG++LYF+LQ Y IFGPTWWG +A DHCPLA+CPTAPG+ + GCPV
Sbjct: 286 LDAGVAFMGVILYFALQYYDIFGPTWWGQDADDHCPLAKCPTAPGIISHGCPV 128


>AI736639 
          Length = 427

 Score =  186 bits (472), Expect = 3e-47
 Identities = 83/141 (58%), Positives = 105/141 (73%)
 Frame = +2

Query: 109 GWAGIFRRFLVDSPYMWWPEILVQVSLFRAFHEKEKRPKGGTSRLQFFFLVFVASFAYYI 168
           GWAG+FR+FLV+   MWWP  LVQVSLF A HEK KRPKGGT+R QFF LV V+  AYY+
Sbjct: 5   GWAGLFRKFLVEPGEMWWPSNLVQVSLFSALHEKSKRPKGGTTRTQFFLLVLVSGLAYYV 184

Query: 169 VPGYFFQAISTVSFFCLIWKDSITAQQIGSGMKGLGIGSFGLDWNTVAGFLGSPLAVPGF 228
            PGY F  +++ S+ C +   S+  QQ+GSG++GLGI +FG+DW+T++ +LGSPLA P F
Sbjct: 185 FPGYLFSMLTSFSWMCWLAPKSVLVQQLGSGLRGLGIAAFGIDWSTISAYLGSPLASPWF 364

Query: 229 AIINIMAGFVLYMYVLIPIAY 249
           A  NI  GF L MYV+ PIAY
Sbjct: 365 ATANIAVGFFLVMYVMTPIAY 427


>BG839504 similar to GP|20466754|gb Isp4-like protein {Arabidopsis thaliana},
           partial (15%)
          Length = 499

 Score =  104 bits (260), Expect(2) = 2e-23
 Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
 Frame = +3

Query: 590 IPPRRSVNYITWGIVGMFFNFYVYRKFRVWWARHTYILSAGLDAGVAFMGLVLYFSLQSY 649
           +PP   +NY  W  VG  FNF+++R    WW R+ Y+LSA LD+GVAFM ++ YF+L   
Sbjct: 75  MPPATPLNYNAWIFVGTIFNFFIFRYRXKWWXRYNYVLSAALDSGVAFMTVLXYFAL--- 245

Query: 650 GIFGPT--WWGLEADHCPLARCPTAPGVYAEGCP 681
           G+   +  WWG + +HCPLA CPTA GV  +GCP
Sbjct: 246 GLENKSXNWWGNDGEHCPLAVCPTAKGVIVDGCP 347



 Score = 23.5 bits (49), Expect(2) = 2e-23
 Identities = 7/16 (43%), Positives = 10/16 (61%)
 Frame = +2

Query: 569 FPNHKWIKLINIPIII 584
           FP   WI  IN+P+ +
Sbjct: 11  FPKQSWIPXINLPVXL 58


>TC213712 similar to UP|Q9LWW1 (Q9LWW1) ESTs D25093(R3139) (Glutathione
           transporter), partial (14%)
          Length = 393

 Score =  105 bits (262), Expect = 7e-23
 Identities = 50/106 (47%), Positives = 63/106 (59%)
 Frame = +2

Query: 577 LINIPIIIVGASTIPPRRSVNYITWGIVGMFFNFYVYRKFRVWWARHTYILSAGLDAGVA 636
           LIN+P++I     +PP  +VNY +W I G    F V+R    WW RH Y+LS  LDAG+A
Sbjct: 11  LINMPVLIGATGMMPPATAVNYTSWIIAGFLSGFVVFRYKPEWWKRHNYVLSGALDAGLA 190

Query: 637 FMGLVLYFSLQSYGIFGPTWWGLEADHCPLARCPTAPGVYAEGCPV 682
           FMG++LY  L    I    WWG + D C LA CPTA  V  +GC V
Sbjct: 191 FMGVLLYLCLGLEDI-SLNWWGNDLDGCTLAHCPTAKVVEVQGCAV 325


>TC223528 weakly similar to UP|Q8H0V0 (Q8H0V0) Isp4 like protein, partial
           (4%)
          Length = 399

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = +3

Query: 650 GIFGPTWWGLEADHCPLARCPTAPGVYAEGCPV 682
           GIFGPTWWGL+ADHC LA+CPTAP V+A+GCP+
Sbjct: 6   GIFGPTWWGLDADHCHLAKCPTAPDVHAKGCPL 104


>AI959812 
          Length = 193

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 26/59 (44%), Positives = 41/59 (69%)
 Frame = -2

Query: 347 DVHTRIMKKNYEQVPEWWFVAILILMVMMALLACEGFGKQLQLPWWGILLSLSIALVFT 405
           D+HTR+M++ Y+ VP WWF  IL   + + +  CE + + LQLPWWG+LL+ +I++  T
Sbjct: 174 DIHTRLMRR-YKSVPTWWFYIILAANIALIIFICEYYNESLQLPWWGVLLACAISIFRT 1


>CK605780 
          Length = 491

 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 30/78 (38%), Positives = 39/78 (49%)
 Frame = -3

Query: 581 PIIIVGASTIPPRRSVNYITWGIVGMFFNFYVYRKFRVWWARHTYILSAGLDAGVAFMGL 640
           P I   A  IPP        W IVG+ FN+++ R +  WW R+ Y+LS  LD G A   +
Sbjct: 471 PSIFGAAGQIPPATCWYLGQWVIVGLIFNYFIRRAYFGWWTRYNYVLSGALDIGTALCIV 292

Query: 641 VLYFSLQSYGIFGPTWWG 658
           V   +L   G   P WWG
Sbjct: 291 VSALALGLSGASFPDWWG 238


>TC206603 similar to UP|Q9LSD4 (Q9LSD4) Gb|AAF23830.1, partial (47%)
          Length = 1062

 Score = 37.7 bits (86), Expect = 0.017
 Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
 Frame = +1

Query: 389 LPWWGILLS--LSIALVFTLPIGV-----IEATTSARTGLNVITELVIGFTYPGKPLANV 441
           L W+ +L S  L+ AL F    G        A+T  + GL +I   V      G  +A V
Sbjct: 505 LKWYLVLCSYILAPALAFCNSYGTGLTDWSLASTYGKIGLFIIAAAV---GQNGGVIAGV 675

Query: 442 AFKTYGHTSMVQALGFLGDFKLGHYMKIPPKSMFIVQLVGTVVSLSVHFGTAWWLLTSIE 501
           A      + +  A   + DFK G+      KSMF+ QL+GT +   +   T W   T+ +
Sbjct: 676 AACAVMMSIVATAADLMQDFKTGYLTLSSAKSMFVSQLIGTAMGCVIAPLTFWMFWTAFD 855


>TC206604 similar to UP|Q9LSD4 (Q9LSD4) Gb|AAF23830.1, partial (37%)
          Length = 1091

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 26/89 (29%), Positives = 40/89 (44%)
 Frame = +2

Query: 413 ATTSARTGLNVITELVIGFTYPGKPLANVAFKTYGHTSMVQALGFLGDFKLGHYMKIPPK 472
           A+T  + GL +I   V      G  +A VA      + +  A   + DFK G+      K
Sbjct: 86  ASTYGKIGLFIIAAAV---GQNGGVIAGVASCAVMMSIVATAADLMQDFKTGYLTLSSAK 256

Query: 473 SMFIVQLVGTVVSLSVHFGTAWWLLTSIE 501
           SMF+ QL+GT +   +   T W   T+ +
Sbjct: 257 SMFVSQLIGTAMGCVIAPLTFWMFWTAFD 343


>TC221285 similar to UP|Q6R3L0 (Q6R3L0) Metal-nicotianamine transporter YSL1,
           partial (32%)
          Length = 945

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +1

Query: 460 DFKLGHYMKIPPKSMFIVQLVGTVV 484
           DFK  +Y    PK+MFI QLVGT +
Sbjct: 103 DFKTAYYTCTSPKAMFICQLVGTAL 177


>TC224807 homologue to PRF|1909359A.0|445612|1909359A ribosomal protein S19.
           {Solanum tuberosum;} , complete
          Length = 955

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 21/86 (24%), Positives = 41/86 (47%)
 Frame = -1

Query: 141 EKEKRPKGGTSRLQFFFLVFVASFAYYIVPGYFFQAISTVSFFCLIWKDSITAQQIGSGM 200
           +K  + K G  +  FFF    AS A+  +    F A+  +SF C +   ++ +      +
Sbjct: 592 QKNLKIKTGCLKTHFFFPALAASEAFVFLTPRIFLALFFLSFICFLDFSTLVSSPF---L 422

Query: 201 KGLGIGSFGLDWNTVAGFLGSPLAVP 226
             L +GS+ L ++T +    +P+ +P
Sbjct: 421 ISLYLGSYFLAFSTES*IKPNPVDLP 344


>TC224409 similar to UP|POT6_ARATH (Q8W4I4) Potassium transporter 6 (AtPOT6)
           (AtHAK6), partial (22%)
          Length = 529

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = +1

Query: 123 YMWWPEILVQVSLFRAFHEKEKRPKGGTSRLQFFFLVFVASFAYYIVPGYFFQAISTVSF 182
           + W P +   +S +  F   +K  KGG   L    L    S A Y   G+F Q    ++F
Sbjct: 22  FHWNPHVYEALSPYYMFKFLKKTQKGGWMSLGGILLCITGSEAMYADLGHFSQLSIKIAF 201

Query: 183 FCLIWKDSITA 193
             L++   I A
Sbjct: 202 TFLVYPSLILA 234


>TC224272 similar to UP|Q94XD8 (Q94XD8) Cytochrome oxidase subunit III,
           partial (30%)
          Length = 243

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 11/25 (44%), Positives = 20/25 (80%)
 Frame = +1

Query: 150 TSRLQFFFLVFVASFAYYIVPGYFF 174
           TSR  FFF++F++ F+++I+  YF+
Sbjct: 40  TSRSFFFFILFLSIFSFFIITRYFY 114


>TC224701 homologue to PRF|1909359A.0|445612|1909359A ribosomal protein S19.
           {Solanum tuberosum;} , complete
          Length = 849

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 21/86 (24%), Positives = 41/86 (47%)
 Frame = -1

Query: 141 EKEKRPKGGTSRLQFFFLVFVASFAYYIVPGYFFQAISTVSFFCLIWKDSITAQQIGSGM 200
           +K  + + G  +  FFF  F AS A   +    F A+  +SF C +   ++ +      +
Sbjct: 576 QKNLKIRTGCLKTHFFFPAFAASDALVFLTPRIFLALFFLSFICFLDFSTLVSSPF---L 406

Query: 201 KGLGIGSFGLDWNTVAGFLGSPLAVP 226
             L +GS+ L ++T +    +P+ +P
Sbjct: 405 ISLYLGSYFLAFSTES*IKPNPVDLP 328


>TC207802 similar to UP|Q6R3L0 (Q6R3L0) Metal-nicotianamine transporter YSL1,
           partial (29%)
          Length = 1137

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 460 DFKLGHYMKIPPKSMFIVQLVG 481
           DFK  HY +  P++MFI Q++G
Sbjct: 58  DFKTAHYTRTSPRAMFICQVIG 123


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.327    0.142    0.460 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,710,867
Number of Sequences: 63676
Number of extensions: 556922
Number of successful extensions: 4028
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 3925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4010
length of query: 683
length of database: 12,639,632
effective HSP length: 104
effective length of query: 579
effective length of database: 6,017,328
effective search space: 3484032912
effective search space used: 3484032912
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)


Medicago: description of AC143341.6