BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC143341.11 - phase: 0
(289 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CO980537 218 3e-57
TC224501 similar to UP|Q8GZF2 (Q8GZF2) Dehydration responsive el... 125 2e-29
AW706727 homologue to GP|9369375|gb|A F10A5.29 {Arabidopsis thal... 124 4e-29
TC226585 homologue to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding ... 124 5e-29
TC226582 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding pr... 120 7e-28
TC226581 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding pr... 120 7e-28
TC226583 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding pr... 118 4e-27
TC209581 similar to UP|Q9LKK0 (Q9LKK0) Apetala2 domain-containin... 106 1e-23
TC228532 similar to UP|Q8GZE8 (Q8GZE8) Dehydration-responsive el... 100 8e-22
TC215663 similar to UP|Q6IVL3 (Q6IVL3) Transcription factor DRE-... 99 2e-21
TC215664 similar to UP|Q6IVL3 (Q6IVL3) Transcription factor DRE-... 99 3e-21
TC225047 similar to UP|Q6IVL3 (Q6IVL3) Transcription factor DRE-... 97 1e-20
TC225042 similar to UP|Q6IVL3 (Q6IVL3) Transcription factor DRE-... 96 1e-20
TC220118 homologue to UP|Q9SKT1 (Q9SKT1) AP2 domain transcriptio... 91 8e-19
TC215013 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive pro... 91 8e-19
TC225490 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive pro... 91 8e-19
TC225486 similar to UP|Q70AB2 (Q70AB2) Ethylene transcription fa... 90 1e-18
TC225579 similar to UP|Q84KS7 (Q84KS7) AP2/ERF-domain protein, p... 87 7e-18
TC219068 similar to UP|O81138 (O81138) AP2 domain family transcr... 87 7e-18
BM094926 homologue to GP|9758388|dbj| AP2 domain transcription f... 87 9e-18
>CO980537
Length = 374
Score = 218 bits (555), Expect = 3e-57
Identities = 101/115 (87%), Positives = 104/115 (89%)
Frame = +2
Query: 2 MDNSKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFA 61
MD KKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKR LWLGSFA
Sbjct: 29 MDTCKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRILLWLGSFA 208
Query: 62 TAEEAAMAYDEAARRLYGPDAYLNLPHMQTHSNSTMKTGKFKWLPSKNFISMFPS 116
TAEEAAMAYDEAA LYGPDAYLNLPH+Q S ST+ +GKFKW PSKNFISMFPS
Sbjct: 209 TAEEAAMAYDEAAXXLYGPDAYLNLPHLQPRSTSTITSGKFKWFPSKNFISMFPS 373
>TC224501 similar to UP|Q8GZF2 (Q8GZF2) Dehydration responsive element
binding protein, partial (38%)
Length = 476
Score = 125 bits (315), Expect = 2e-29
Identities = 56/88 (63%), Positives = 71/88 (80%)
Frame = +1
Query: 7 KSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEA 66
K+P K KKG +GKGGPQN+ C YRGVRQRTWGKWV EIREP + +RLWLG+F++A+EA
Sbjct: 142 KAPAKGSKKGCMKGKGGPQNSQCNYRGVRQRTWGKWVGEIREPNRGSRLWLGTFSSAQEA 321
Query: 67 AMAYDEAARRLYGPDAYLNLPHMQTHSN 94
A+AYDEAAR +YGP A LN P + +++
Sbjct: 322 ALAYDEAARAMYGPCARLNCPGITDYAS 405
>AW706727 homologue to GP|9369375|gb|A F10A5.29 {Arabidopsis thaliana},
partial (38%)
Length = 436
Score = 124 bits (312), Expect = 4e-29
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +1
Query: 6 KKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEE 65
KK +KG RGKGGP+NA+C Y+GVRQRTWGKWVAEIREP RLWLG+F TA E
Sbjct: 127 KKPAQASSRKGCMRGKGGPENATCTYKGVRQRTWGKWVAEIREPNCGARLWLGTFDTARE 306
Query: 66 AAMAYDEAARRLYGPDAYLNLPHM 89
AA+AYD AAR+LYGPDA LNLP +
Sbjct: 307 AALAYDAAARKLYGPDAKLNLPEL 378
>TC226585 homologue to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding protein,
partial (23%)
Length = 549
Score = 124 bits (311), Expect = 5e-29
Identities = 63/114 (55%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Frame = +3
Query: 5 SKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAE 64
++K P K KKG +GKGGP+N+ C YRGVRQRTWGKWVAEIREP + +RLWLG+F TA
Sbjct: 6 ARKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAI 185
Query: 65 EAAMAYDEAARRLYGPDAYLNLPHMQTHSNSTMKTGKFKWLP-SKNFISMFPSC 117
AA+AYDEAAR +YG A LN P++Q ST+ + P + N + F SC
Sbjct: 186 SAALAYDEAARAMYGSCARLNFPNVQV---STLSEESSRNSPAAANPVEKFSSC 338
>TC226582 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding protein,
partial (27%)
Length = 942
Score = 120 bits (301), Expect = 7e-28
Identities = 57/90 (63%), Positives = 67/90 (74%)
Frame = +3
Query: 6 KKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEE 65
+K P K KKG +GKGGP+N+ C YRGVRQRTWGKWVAEIREP + RLWLG+F TA
Sbjct: 258 RKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIG 437
Query: 66 AAMAYDEAARRLYGPDAYLNLPHMQTHSNS 95
AA+AYDEAAR +YG A LN P++ S S
Sbjct: 438 AALAYDEAARAMYGSCARLNFPNVSVSSFS 527
>TC226581 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding protein,
partial (27%)
Length = 943
Score = 120 bits (301), Expect = 7e-28
Identities = 57/90 (63%), Positives = 67/90 (74%)
Frame = +3
Query: 6 KKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEE 65
+K P K KKG +GKGGP+N+ C YRGVRQRTWGKWVAEIREP + RLWLG+F TA
Sbjct: 273 RKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIG 452
Query: 66 AAMAYDEAARRLYGPDAYLNLPHMQTHSNS 95
AA+AYDEAAR +YG A LN P++ S S
Sbjct: 453 AALAYDEAARAMYGSCARLNFPNVSVSSFS 542
>TC226583 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding protein,
partial (27%)
Length = 1180
Score = 118 bits (295), Expect = 4e-27
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = +3
Query: 6 KKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEE 65
+K P K KKG +GKGGP+N C YRGVRQRTWGKWVAEIREP + +RLWLG+F TA
Sbjct: 324 RKVPAKGSKKGCMKGKGGPENLRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIS 503
Query: 66 AAMAYDEAARRLYGPDAYLNLPHMQTHSNS 95
AA+AYDEAA +YG A LN P++Q + S
Sbjct: 504 AALAYDEAAMAMYGFCARLNFPNVQVSTFS 593
>TC209581 similar to UP|Q9LKK0 (Q9LKK0) Apetala2 domain-containing protein,
partial (44%)
Length = 1113
Score = 106 bits (265), Expect = 1e-23
Identities = 68/165 (41%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Frame = +1
Query: 11 KPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAY 70
KP R A+ YRGVRQR WGKWVAEIR PK RTRLWLG+F TAEEAA+AY
Sbjct: 160 KPITMKHVRASCSNSKATKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEEAALAY 339
Query: 71 DEAARRLYGPDAYLNLPHMQTHSNSTM-KTGKFKWLPSKNFISMFPSCGLLNVNAQ---- 125
D AA +L G +A LN PH++ H + G +K LPS + C L Q
Sbjct: 340 DNAAFKLRGENARLNFPHLRHHGARVYGEFGNYKPLPSAVDAKLQAICQSLGTKLQKLKT 519
Query: 126 ---PSVHLIHQRLQEFKQNAVVASQSS-------FSSSSNDPKAE 160
P V ++ EF+ + SS +SSSS+ P+++
Sbjct: 520 DQNPVVDAKVKKTSEFEDFKIENQTSSSSALSDEYSSSSSSPESD 654
>TC228532 similar to UP|Q8GZE8 (Q8GZE8) Dehydration-responsive element
binding protein 3, partial (55%)
Length = 1565
Score = 100 bits (249), Expect = 8e-22
Identities = 53/95 (55%), Positives = 63/95 (65%), Gaps = 1/95 (1%)
Frame = +1
Query: 14 KKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEA 73
K+ P + G + YRGVRQR WGKWVAEIR PK RTRLWLG+F TAEEAA+AYD A
Sbjct: 583 KRVPMKHAGTAAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNA 762
Query: 74 ARRLYGPDAYLNLPHMQTHSNSTM-KTGKFKWLPS 107
A +L G A LN PH++ H + G +K LPS
Sbjct: 763 AFKLRGEFARLNFPHLRHHGAFVFGEFGDYKPLPS 867
>TC215663 similar to UP|Q6IVL3 (Q6IVL3) Transcription factor DRE-binding
factor 2, partial (33%)
Length = 1777
Score = 99.0 bits (245), Expect = 2e-21
Identities = 49/77 (63%), Positives = 57/77 (73%)
Frame = +2
Query: 14 KKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEA 73
K P + GGP + YRGVRQR WGKWVAEIR PK RTRLWLG+F TAEEAA+AYD+A
Sbjct: 833 KPVPMKHVGGPAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKA 1012
Query: 74 ARRLYGPDAYLNLPHMQ 90
A RL G A LN P+++
Sbjct: 1013AYRLRGDLARLNFPNLK 1063
>TC215664 similar to UP|Q6IVL3 (Q6IVL3) Transcription factor DRE-binding
factor 2, partial (34%)
Length = 1286
Score = 98.6 bits (244), Expect = 3e-21
Identities = 49/77 (63%), Positives = 56/77 (72%)
Frame = +2
Query: 14 KKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEA 73
K P + GGP + YRGVRQR WGKWVAEIR PK RTRLWLG+F TAEEAA+AYD+A
Sbjct: 392 KPVPMKHVGGPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKA 571
Query: 74 ARRLYGPDAYLNLPHMQ 90
A RL G A LN P ++
Sbjct: 572 AYRLRGDFARLNFPSLK 622
>TC225047 similar to UP|Q6IVL3 (Q6IVL3) Transcription factor DRE-binding factor
2, partial (42%)
Length = 1886
Score = 96.7 bits (239), Expect = 1e-20
Identities = 69/179 (38%), Positives = 92/179 (50%), Gaps = 3/179 (1%)
Frame = +3
Query: 17 PTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARR 76
P + G P + YRGVRQR WGKWVAEIR PK RTRLWLG+F TAEEAA+AYD+AA +
Sbjct: 870 PMKHAGMPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYK 1049
Query: 77 LYGPDAYLNLPHMQTHSNSTM--KTGKFKWLPSKNFISMFPSC-GLLNVNAQPSVHLIHQ 133
L G A LN P+++ H S++ G++K L S + C GL + Q +
Sbjct: 1050 LRGDFARLNFPNLR-HQGSSVGGDFGEYKPLHSAVDAKLQAICEGLAELQKQGKTEKPPR 1226
Query: 134 RLQEFKQNAVVASQSSFSSSSNDPKAEEIQKVDSKKSHTEDPLPKETIVQTSANKMLGD 192
+ + VV+ + ++N K E S S PL T S + GD
Sbjct: 1227 KSRSKLAEKVVSDK----ENNNSCKVE----AASWSSEGSSPLSDLTFADVSEAQWEGD 1379
>TC225042 similar to UP|Q6IVL3 (Q6IVL3) Transcription factor DRE-binding factor
2, partial (40%)
Length = 1705
Score = 96.3 bits (238), Expect = 1e-20
Identities = 69/179 (38%), Positives = 95/179 (52%), Gaps = 3/179 (1%)
Frame = +3
Query: 17 PTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARR 76
P + G P + YRGVRQR WGKWVAEIR PK RTRLWLG+F TAEEAA+AYD+AA +
Sbjct: 861 PMKHVGMPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYK 1040
Query: 77 LYGPDAYLNLPHMQTHSNSTM--KTGKFKWLPSKNFISMFPSC-GLLNVNAQPSVHLIHQ 133
L G A LN P+++ H S++ G++K L S + C GL + Q +
Sbjct: 1041 LRGDFARLNFPNLR-HQGSSVGGDFGEYKPLHSAVDAKLQAICEGLAELQKQGKTEKPPR 1217
Query: 134 RLQEFKQNAVVASQSSFSSSSNDPKAEEIQKVDSKKSHTEDPLPKETIVQTSANKMLGD 192
K + +AS + ++ND + +++ S S PL T S + GD
Sbjct: 1218 -----KTRSKLASPPE-NDNNNDNNSCKVEAA-SSSSEGSSPLSVLTFADVSEPQWEGD 1373
>TC220118 homologue to UP|Q9SKT1 (Q9SKT1) AP2 domain transcription factor,
partial (25%)
Length = 1065
Score = 90.5 bits (223), Expect = 8e-19
Identities = 43/66 (65%), Positives = 50/66 (75%)
Frame = +2
Query: 24 PQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAY 83
P N + YRGVRQR WGKWVAEIR P+ RTRLWLG+F TAE+AAMAYD A +L G +A
Sbjct: 2 PINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENAR 181
Query: 84 LNLPHM 89
LN P +
Sbjct: 182LNFPEL 199
>TC215013 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein,
complete
Length = 1999
Score = 90.5 bits (223), Expect = 8e-19
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Frame = +3
Query: 4 NSKKSPLKPWKKGPTRGKGGPQNASC-------EYRGVRQRTWGKWVAEIREPKKRTRLW 56
+S K+ KP +G + Q C +YRG+RQR WGKW AEIR+P+K R+W
Sbjct: 489 SSNKAASKPLSRGSATVESKGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVW 668
Query: 57 LGSFATAEEAAMAYDEAARRLYGPDAYLNLP 87
LG+F+TAEEAA AYD ARR+ G A +N P
Sbjct: 669 LGTFSTAEEAARAYDAEARRIRGKKAKVNFP 761
>TC225490 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein,
partial (64%)
Length = 865
Score = 90.5 bits (223), Expect = 8e-19
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Frame = +3
Query: 4 NSKKSPLKPWKKGPTRGKGGPQNASC-------EYRGVRQRTWGKWVAEIREPKKRTRLW 56
+S K+ KP +G + Q C +YRG+RQR WGKW AEIR+P+K R+W
Sbjct: 357 SSNKAASKPLSRGSATVESKGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVW 536
Query: 57 LGSFATAEEAAMAYDEAARRLYGPDAYLNLP 87
LG+F+TAEEAA AYD ARR+ G A +N P
Sbjct: 537 LGTFSTAEEAARAYDAEARRIRGKKAKVNFP 629
>TC225486 similar to UP|Q70AB2 (Q70AB2) Ethylene transcription factor,
partial (49%)
Length = 1458
Score = 89.7 bits (221), Expect = 1e-18
Identities = 51/126 (40%), Positives = 72/126 (56%)
Frame = +1
Query: 30 EYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHM 89
+YRG+RQR WGKW AEIR+P+K R+WLG+F TAEEAA AYD ARR+ G A +N P
Sbjct: 346 QYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFP-- 519
Query: 90 QTHSNSTMKTGKFKWLPSKNFISMFPSCGLLNVNAQPSVHLIHQRLQEFKQNAVVASQSS 149
+ S++K K P +N ++ P+ G + L+ Q+ + A+ +S
Sbjct: 520 EAPGTSSVKRSKVN--PQENLKTVQPNLGHKFSAGNNHMDLVEQK----PLVSQYANMAS 681
Query: 150 FSSSSN 155
F S N
Sbjct: 682 FPGSGN 699
>TC225579 similar to UP|Q84KS7 (Q84KS7) AP2/ERF-domain protein, partial (31%)
Length = 1156
Score = 87.4 bits (215), Expect = 7e-18
Identities = 40/67 (59%), Positives = 48/67 (70%)
Frame = +2
Query: 21 KGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGP 80
K G + YRG+RQR WGKW AEIR+P K R+WLG+F TAEEAA AYD+AA+R+ G
Sbjct: 347 KSGGRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFPTAEEAARAYDDAAKRIRGD 526
Query: 81 DAYLNLP 87
A LN P
Sbjct: 527 KAKLNFP 547
>TC219068 similar to UP|O81138 (O81138) AP2 domain family transcription
factor homolog (AP2 domain transcription factor)
(ABI4:abscisic acid-insensitive 4 ) (ABI4), partial
(25%)
Length = 1064
Score = 87.4 bits (215), Expect = 7e-18
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +1
Query: 34 VRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHMQTHS 93
VRQR+WGKWVAEIREP+KRTR WLG+FATAE+AA AYD AA LYG A LNL + S
Sbjct: 1 VRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSGSSS 180
Query: 94 NST 96
S+
Sbjct: 181QSS 189
>BM094926 homologue to GP|9758388|dbj| AP2 domain transcription factor-like
{Arabidopsis thaliana}, partial (25%)
Length = 453
Score = 87.0 bits (214), Expect = 9e-18
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = -2
Query: 26 NASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLN 85
N YRGVRQR WGKW +EIR+PKK R+WLG+F TAE AA+AYDEAA R G A LN
Sbjct: 326 NVRRHYRGVRQRPWGKWASEIRDPKKAARVWLGTFETAEAAALAYDEAALRFKGTKAKLN 147
Query: 86 LP 87
P
Sbjct: 146 FP 141
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.312 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,786,099
Number of Sequences: 63676
Number of extensions: 169602
Number of successful extensions: 1068
Number of sequences better than 10.0: 199
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of query: 289
length of database: 12,639,632
effective HSP length: 96
effective length of query: 193
effective length of database: 6,526,736
effective search space: 1259660048
effective search space used: 1259660048
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC143341.11