BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC143341.1 + phase: 0 /partial
(249 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC219748 similar to GB|AAQ62420.1|34146824|BT010419 At3g12170 {A... 395 e-110
TC205833 similar to GB|AAM78044.1|21928031|AY125534 At3g62600/F2... 75 4e-14
TC228163 similar to UP|Q8LEU4 (Q8LEU4) DnaJ protein-like, partia... 72 3e-13
TC232105 similar to UP|Q9FEW7 (Q9FEW7) DnaJ like protein, partia... 68 3e-12
TC226781 similar to UP|Q9T024 (Q9T024) DnaJ-like protein (AT4g39... 68 4e-12
TC211892 similar to UP|Q9FEW7 (Q9FEW7) DnaJ like protein, partia... 67 1e-11
TC206630 homologue to UP|Q8H2B1 (Q8H2B1) DnaJ-like protein, comp... 65 2e-11
TC226780 similar to UP|Q9T024 (Q9T024) DnaJ-like protein (AT4g39... 65 3e-11
TC232641 homologue to UP|O49457 (O49457) Heat-shock protein, par... 65 3e-11
TC220213 similar to UP|Q7XYV0 (Q7XYV0) P58IPK, partial (38%) 64 8e-11
TC216802 similar to UP|Q8VXV4 (Q8VXV4) At1g24120/F3I6_4 (ARG1-li... 63 1e-10
TC231504 similar to UP|Q9FEW7 (Q9FEW7) DnaJ like protein, partia... 63 1e-10
BM176899 similar to GP|27817868|dbj OJ1081_B12.17 {Oryza sativa ... 63 1e-10
TC205941 homologue to UP|Q8H2B1 (Q8H2B1) DnaJ-like protein, comp... 63 1e-10
TC205942 homologue to UP|Q8H2B1 (Q8H2B1) DnaJ-like protein, part... 63 1e-10
TC224730 similar to UP|O24074 (O24074) DnaJ-like protein MsJ1, p... 62 3e-10
TC214769 homologue to UP|Q9SWB5 (Q9SWB5) Seed maturation protein... 61 4e-10
TC225458 UP|Q9SWB5 (Q9SWB5) Seed maturation protein PM37, complete 61 4e-10
TC222989 weakly similar to UP|DJB6_HUMAN (O75190) DnaJ homolog s... 61 5e-10
TC217251 weakly similar to UP|DJB1_HUMAN (P25685) DnaJ homolog s... 60 7e-10
>TC219748 similar to GB|AAQ62420.1|34146824|BT010419 At3g12170 {Arabidopsis
thaliana;} , partial (91%)
Length = 1074
Score = 395 bits (1014), Expect = e-110
Identities = 198/248 (79%), Positives = 221/248 (88%), Gaps = 2/248 (0%)
Frame = +1
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 60
VLG+EKTASQQEIKKAYYKLALRLHPDKNPGDEEAK KFQQLQ VI+ILGDEEKRA+YDQ
Sbjct: 148 VLGVEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVIAILGDEEKRAVYDQ 327
Query: 61 TGCIDDDDLAGDV-QNLHAFFKTMYKKVTEADIEEFEANYRGSDSEKNDLIELYKKYKGN 119
TG +DD +LAGDV QNL +F+ MYKKVTEADIEEFEANYRGSD EKNDLI+LYKK GN
Sbjct: 328 TGFVDDAELAGDVVQNLKEYFRAMYKKVTEADIEEFEANYRGSDIEKNDLIDLYKKCNGN 507
Query: 120 MKRLFCSMLCSDAKLDSHRFKDILDEAIAAGELKATKAYQKWAKEVSETKPPTSPLKRKA 179
M RLFCSMLCSD KLDSHRFKDI+DE IAAGELK TKAY+KW K++SE KPPTSPL+R+A
Sbjct: 508 MNRLFCSMLCSDPKLDSHRFKDIIDEVIAAGELKETKAYKKWTKKISEIKPPTSPLRRRA 687
Query: 180 KSN-KQSETDLCAIISQRRNERKGQFDSMFASLVSKYGGSDMPEPSEEEFEAAQKKLEKG 238
KS+ KQ E +L AIISQR++ERK FDSMF+SL+SKYGG MPEPSEEEFEAAQ+K+E G
Sbjct: 688 KSSKKQPEKELYAIISQRKHERKDHFDSMFSSLISKYGGGQMPEPSEEEFEAAQRKVESG 867
Query: 239 RSSKKSKQ 246
RSSKK K+
Sbjct: 868 RSSKKLKR 891
>TC205833 similar to GB|AAM78044.1|21928031|AY125534 At3g62600/F26K9_30
{Arabidopsis thaliana;} , partial (55%)
Length = 866
Score = 74.7 bits (182), Expect = 4e-14
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +1
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 60
+L L K AS ++IK+AY KLAL+ HPDKNPG+EEA +KF ++ +L D EKR +YD+
Sbjct: 292 ILQLSKGASDEQIKRAYRKLALKYHPDKNPGNEEANKKFAEISNAYEVLSDSEKRNIYDR 471
Query: 61 TG 62
G
Sbjct: 472 YG 477
>TC228163 similar to UP|Q8LEU4 (Q8LEU4) DnaJ protein-like, partial (65%)
Length = 1660
Score = 71.6 bits (174), Expect = 3e-13
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +2
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 60
+LG+ K AS EIKKAYY LA +LHPD N D +A++KFQ++ +L DEE+R YDQ
Sbjct: 410 ILGVSKNASSSEIKKAYYGLAKKLHPDTNKDDPQAEKKFQEVSIAYEVLKDEERRQQYDQ 589
Query: 61 TG 62
G
Sbjct: 590 LG 595
>TC232105 similar to UP|Q9FEW7 (Q9FEW7) DnaJ like protein, partial (25%)
Length = 315
Score = 68.2 bits (165), Expect = 3e-12
Identities = 33/74 (44%), Positives = 52/74 (69%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNP-GDEEAKEKFQQLQKVISILGDEEKRALYD 59
+L ++K A+ +E+KKAY KLA++ HPDKNP +EA+ KF+Q+ + +L D +KRA+YD
Sbjct: 73 ILQVDKHATDEELKKAYRKLAMKWHPDKNPTNKKEAETKFKQISEAYEVLSDPQKRAIYD 252
Query: 60 QTGCIDDDDLAGDV 73
+ G ++ L G V
Sbjct: 253 EYG---EEGLKGQV 285
>TC226781 similar to UP|Q9T024 (Q9T024) DnaJ-like protein
(AT4g39150/T22F8_50), partial (37%)
Length = 622
Score = 67.8 bits (164), Expect = 4e-12
Identities = 33/62 (53%), Positives = 41/62 (65%)
Frame = +1
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 60
+LG+ AS EIKKAYY A +HPDKNPGD +A E FQ+L + +L D KRA YD+
Sbjct: 16 ILGVNFDASAAEIKKAYYVKARIVHPDKNPGDPKAAENFQKLGEAYQVLSDPGKRAAYDE 195
Query: 61 TG 62
G
Sbjct: 196HG 201
>TC211892 similar to UP|Q9FEW7 (Q9FEW7) DnaJ like protein, partial (38%)
Length = 579
Score = 66.6 bits (161), Expect = 1e-11
Identities = 31/74 (41%), Positives = 52/74 (69%), Gaps = 1/74 (1%)
Frame = +2
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGD-EEAKEKFQQLQKVISILGDEEKRALYD 59
+L ++++A ++KKAY KLA++ HPDKNP + +EA+ KF+Q+ + +L D +K+A+YD
Sbjct: 212 ILQVDRSAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKKAIYD 391
Query: 60 QTGCIDDDDLAGDV 73
Q G ++ L G V
Sbjct: 392 QYG---EEGLKGQV 424
>TC206630 homologue to UP|Q8H2B1 (Q8H2B1) DnaJ-like protein, complete
Length = 892
Score = 65.5 bits (158), Expect = 2e-11
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Frame = +3
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDK---NPGDE-EAKEKFQQLQKVISILGDEEKRA 56
VLG+ + AS +I+ AY KLA+R HPDK NP EAK +FQQ+Q+ S+L D+ KR+
Sbjct: 159 VLGIRRDASFSDIRTAYRKLAMRWHPDKWALNPATAGEAKRRFQQIQEAYSVLSDQSKRS 338
Query: 57 LYDQ--TGCIDDDDLAGDVQNLHAFFKTMY 84
+YD ++++D V + H F T++
Sbjct: 339 MYDAGLYDPLEEEDQVRKVFSFHFFSITIF 428
>TC226780 similar to UP|Q9T024 (Q9T024) DnaJ-like protein
(AT4g39150/T22F8_50), partial (95%)
Length = 1349
Score = 65.1 bits (157), Expect = 3e-11
Identities = 32/62 (51%), Positives = 40/62 (63%)
Frame = +1
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 60
+LG+ AS EIKKAYY A +HPDKNP D +A E FQ+L + +L D KRA YD+
Sbjct: 154 ILGVNYDASAAEIKKAYYVKARIVHPDKNPEDPKAAENFQKLGEAYQVLSDPGKRAAYDE 333
Query: 61 TG 62
G
Sbjct: 334 HG 339
>TC232641 homologue to UP|O49457 (O49457) Heat-shock protein, partial (21%)
Length = 422
Score = 65.1 bits (157), Expect = 3e-11
Identities = 27/63 (42%), Positives = 47/63 (73%), Gaps = 1/63 (1%)
Frame = +3
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGD-EEAKEKFQQLQKVISILGDEEKRALYD 59
+L ++++A +++KKAY +LA++ HPDKNP + +EA+ KF+Q+ + +L D +KR +YD
Sbjct: 186 ILQVDRSAKDEDLKKAYRRLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRGIYD 365
Query: 60 QTG 62
Q G
Sbjct: 366 QYG 374
>TC220213 similar to UP|Q7XYV0 (Q7XYV0) P58IPK, partial (38%)
Length = 981
Score = 63.5 bits (153), Expect = 8e-11
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKN-PGDEEAKEKFQQLQKVISILGDEEKRALYD 59
+LG+ KTAS +IK+AY KLAL+ HPDKN EEA+ +F+++ +L DE+KR YD
Sbjct: 229 ILGISKTASAADIKRAYKKLALQWHPDKNVEKREEAEAQFREIAAAYEVLSDEDKRVRYD 408
Query: 60 QTGCIDDDDLAG 71
+ +++ + G
Sbjct: 409 RGEDLEEAGMGG 444
>TC216802 similar to UP|Q8VXV4 (Q8VXV4) At1g24120/F3I6_4 (ARG1-like protein
1), partial (81%)
Length = 1762
Score = 63.2 bits (152), Expect = 1e-10
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Frame = +2
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 60
VLG+ + ++ QEIK AY K+AL+ HPDKN D +A + F++ +IL D +KR YD
Sbjct: 362 VLGISRNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEATFSYNILSDPDKRRQYDS 541
Query: 61 TGC----IDDDDLAGDVQNLHA---FFKTMYKKV 87
G D+ +L D+ +L A F ++ K+
Sbjct: 542 AGFEAVESDNQELELDLSSLGAVNTMFAALFSKL 643
>TC231504 similar to UP|Q9FEW7 (Q9FEW7) DnaJ like protein, partial (38%)
Length = 648
Score = 63.2 bits (152), Expect = 1e-10
Identities = 33/87 (37%), Positives = 58/87 (65%), Gaps = 5/87 (5%)
Frame = +2
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNP-GDEEAKEKFQQLQKVISILGDEEKRALYD 59
+L +++ AS +E+K+AY KLA++ HPDKNP +EA+ +F+Q+ + +L D +KRA++D
Sbjct: 68 ILEVDRNASDEELKRAYRKLAMKWHPDKNPTNKKEAEIQFKQISESYEVLSDPQKRAIFD 247
Query: 60 QTGCIDDDDLAGDVQ----NLHAFFKT 82
+ G + L G +Q + +FF+T
Sbjct: 248 RYG---EGGLNGGMQTPDEGVASFFRT 319
>BM176899 similar to GP|27817868|dbj OJ1081_B12.17 {Oryza sativa (japonica
cultivar-group)}, partial (19%)
Length = 430
Score = 63.2 bits (152), Expect = 1e-10
Identities = 31/62 (50%), Positives = 39/62 (62%)
Frame = +1
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 60
VLG+ TAS+ EIKKAYY A ++HPDKNP D A + FQ L + +L D +R YD
Sbjct: 211 VLGVSPTASEAEIKKAYYIKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDA 390
Query: 61 TG 62
G
Sbjct: 391 HG 396
>TC205941 homologue to UP|Q8H2B1 (Q8H2B1) DnaJ-like protein, complete
Length = 814
Score = 62.8 bits (151), Expect = 1e-10
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Frame = +3
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDK---NPGDE-EAKEKFQQLQKVISILGDEEKRA 56
VLG+ + AS +I+ AY KLA+R HPDK NP EAK +FQQ+Q+ S+L D+ KR+
Sbjct: 201 VLGIRRDASFSDIRTAYRKLAMRWHPDKWAQNPATAGEAKRRFQQIQEAYSVLSDQSKRS 380
Query: 57 LYD 59
+YD
Sbjct: 381 MYD 389
>TC205942 homologue to UP|Q8H2B1 (Q8H2B1) DnaJ-like protein, partial (76%)
Length = 558
Score = 62.8 bits (151), Expect = 1e-10
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Frame = +2
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDK---NPGDE-EAKEKFQQLQKVISILGDEEKRA 56
VLG+ + AS +I+ AY KLA+R HPDK NP EAK +FQQ+Q+ S+L D+ KR+
Sbjct: 218 VLGIRRDASFSDIRTAYRKLAMRWHPDKWALNPATAGEAKRRFQQIQEAYSVLSDQSKRS 397
Query: 57 LYD 59
+YD
Sbjct: 398 MYD 406
>TC224730 similar to UP|O24074 (O24074) DnaJ-like protein MsJ1, partial (96%)
Length = 1913
Score = 61.6 bits (148), Expect = 3e-10
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = +1
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 60
+LG+ K AS+ EIKKAY K A++ HPDK GD EKF++L + +L D EK+ LYDQ
Sbjct: 409 ILGISKNASEDEIKKAYRKAAMKNHPDKG-GD---PEKFKELGQAYEVLSDPEKKELYDQ 576
Query: 61 TG 62
G
Sbjct: 577 YG 582
>TC214769 homologue to UP|Q9SWB5 (Q9SWB5) Seed maturation protein PM37,
partial (64%)
Length = 943
Score = 61.2 bits (147), Expect = 4e-10
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +2
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 60
+LG+ K ASQ ++KKAY K A++ HPDK GD EKF++L + +L D EKR +YDQ
Sbjct: 170 ILGVSKNASQDDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQ 337
Query: 61 TG 62
G
Sbjct: 338 YG 343
>TC225458 UP|Q9SWB5 (Q9SWB5) Seed maturation protein PM37, complete
Length = 1797
Score = 61.2 bits (147), Expect = 4e-10
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +2
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQ 60
+LG+ K ASQ ++KKAY K A++ HPDK GD EKF++L + +L D EKR +YDQ
Sbjct: 164 ILGVSKNASQDDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQ 331
Query: 61 TG 62
G
Sbjct: 332 YG 337
>TC222989 weakly similar to UP|DJB6_HUMAN (O75190) DnaJ homolog subfamily B
member 6 (Heat shock protein J2) (HSJ-2) (MSJ-1) (HHDJ1)
(MRJ), partial (10%)
Length = 699
Score = 60.8 bits (146), Expect = 5e-10
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Frame = +1
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPDKNPGD------EEAKEKFQQLQKVISILGDEEK 54
+LGL K ++ E+K AY KLA + HPD+ EEAK+KFQ++++ S+L D K
Sbjct: 367 ILGLSKECTELELKNAYRKLAKKWHPDRCSATGNLELVEEAKKKFQEIREAYSVLSDANK 546
Query: 55 RALYDQTGCIDDDD 68
R +YD G D DD
Sbjct: 547 RLMYD-VGVYDSDD 585
>TC217251 weakly similar to UP|DJB1_HUMAN (P25685) DnaJ homolog subfamily B
member 1 (Heat shock 40 kDa protein 1) (Heat shock
protein 40) (HSP40) (DnaJ protein homolog 1) (HDJ-1),
partial (21%)
Length = 1669
Score = 60.5 bits (145), Expect = 7e-10
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = +2
Query: 1 VLGLEKTASQQEIKKAYYKLALRLHPD--KNPGDEEAKEKFQQLQKVISILGDEEKRALY 58
VLG+ + AS+ EIK AY KLA HPD K PG A++KF+++ +L D+EKR++Y
Sbjct: 374 VLGVSRNASKSEIKSAYRKLARNYHPDVNKEPG---AEQKFKEISNAYEVLSDDEKRSIY 544
Query: 59 DQTGCIDDDDLA---GDVQNLHAFFKTMYK 85
D+ G A GD N F+++++
Sbjct: 545 DRFGEAGLKGSAMGMGDFSNPFDLFESLFE 634
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.310 0.128 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,555,503
Number of Sequences: 63676
Number of extensions: 93645
Number of successful extensions: 625
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of query: 249
length of database: 12,639,632
effective HSP length: 95
effective length of query: 154
effective length of database: 6,590,412
effective search space: 1014923448
effective search space used: 1014923448
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC143341.1