BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC143339.8 + phase: 0 /pseudo
(518 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC211561 weakly similar to UP|O22675 (O22675) Reverse transcript... 171 6e-43
CO982349 142 5e-34
AW757033 111 9e-25
BI972659 98 1e-20
AI496436 94 2e-19
CO979823 76 3e-14
TC222557 59 3e-14
TC231922 76 4e-14
TC213061 76 4e-14
TC231841 75 7e-14
BI316892 74 1e-13
CO984521 74 2e-13
TC233392 72 8e-13
TC233956 70 2e-12
TC221865 70 2e-12
BG404993 69 7e-12
CA851073 69 7e-12
BI973267 67 2e-11
BG239687 67 2e-11
CO986021 63 4e-10
>TC211561 weakly similar to UP|O22675 (O22675) Reverse transcriptase
(Fragment) , partial (59%)
Length = 1077
Score = 171 bits (434), Expect = 6e-43
Identities = 88/208 (42%), Positives = 133/208 (63%)
Frame = +1
Query: 3 TATMYVLVNGSPTPEFPLERGLRKGDPLSQFLFLLAAEGLNVMMQSMVEINIFSGYSIGE 62
+A++ VLVNGSPT EF +RGLR+GDPL+ FLF + AEGLN +M+ VE N++ Y +G
Sbjct: 187 SASISVLVNGSPTAEFLPQRGLRQGDPLTPFLFNIVAEGLNGLMRRAVEENLYKPYLVGA 366
Query: 63 HDSMVISHLQFADDTLLVGVKSWANVRALRAVLLLLR*CRSGLKMNFHKSLLVGVNVSES 122
+ + IS LQ+ADDT+ G + NV A++ +L S L++NF KS V++
Sbjct: 367 N-GVPISILQYADDTIFFGEAAKENVEAIKVILRSFE-LVSNLRINFAKSCFGVFGVTDQ 540
Query: 123 WLNEATTMLGCKVGKVPFLYLGLSIGGDPRRLLFWESVVDRVKKRLSGWRSKFLSFGGRL 182
W EA L C + PF+YLG+ IG + RR W+S++ + +++LS W+ + +SFGGR+
Sbjct: 541 WKQEAANYLHCSLLAFPFIYLGIPIGANSRRCHMWDSIIRKCERKLSKWK*RHISFGGRV 720
Query: 183 VLLKVFLSSLHVYALSFFRAPSGIISTL 210
L+K L+S+ +Y SFFR P ++ L
Sbjct: 721 TLIKSVLTSIPIYFFSFFRVPQSVVDKL 804
>CO982349
Length = 795
Score = 142 bits (357), Expect = 5e-34
Identities = 76/219 (34%), Positives = 127/219 (57%)
Frame = +3
Query: 3 TATMYVLVNGSPTPEFPLERGLRKGDPLSQFLFLLAAEGLNVMMQSMVEINIFSGYSIGE 62
+A++ +LVN SP EF +RGLR+GDPL+ LF + AEGL +M+ V+ F+ + +G+
Sbjct: 90 SASVSILVNESPINEFSPQRGLRQGDPLAPLLFNIVAEGLTGLMREAVDRKRFNSFLVGK 269
Query: 63 HDSMVISHLQFADDTLLVGVKSWANVRALRAVLLLLR*CRSGLKMNFHKSLLVGVNVSES 122
+ V S LQ+ADDT+ + N++ ++ +L SGLK+NF +S + +
Sbjct: 270 NKEPV-SILQYADDTIFFEEATMENMKVIKTILRCFE-LASGLKINFAESRFGAIWKPDH 443
Query: 123 WLNEATTMLGCKVGKVPFLYLGLSIGGDPRRLLFWESVVDRVKKRLSGWRSKFLSFGGRL 182
W EA L C + +PF YLG+ I +PR + ++ + + +L+ W+ + +S GGR+
Sbjct: 444 WCKEAAEFLNCSMLSMPFSYLGIPIEANPRCREI*DPIIRKCETKLARWKQRHISLGGRV 623
Query: 183 VLLKVFLSSLHVYALSFFRAPSGIISTLESLFINFFLVG 221
L+ L++L +Y SFFRAPS ++ L ++ F G
Sbjct: 624 TLINAILTALPIYFFSFFRAPSKVVQKLVNIQRKFLWGG 740
>AW757033
Length = 441
Score = 111 bits (277), Expect = 9e-25
Identities = 59/147 (40%), Positives = 88/147 (59%)
Frame = -2
Query: 15 TPEFPLERGLRKGDPLSQFLFLLAAEGLNVMMQSMVEINIFSGYSIGEHDSMVISHLQFA 74
T EF RGLR+GDPL+ LF +AAEGL +M+ V N + +++G++ V S LQ+A
Sbjct: 440 TREFSPHRGLRQGDPLAPLLFNIAAEGLTGLMREAVARNHYKSFAVGKYKKPV-SILQYA 264
Query: 75 DDTLLVGVKSWANVRALRAVLLLLR*CRSGLKMNFHKSLLVGVNVSESWLNEATTMLGCK 134
DDT+ G + NVR ++ +L SGLK+NF KS ++V + W EA + C
Sbjct: 263 DDTIFFGEATMENVRVIKTILRGFE-LASGLKINFAKSRFGAISVPD*WRKEAAEFMNCS 87
Query: 135 VGKVPFLYLGLSIGGDPRRLLFWESVV 161
+ +PF YLG+ IG +PRR W+ ++
Sbjct: 86 LLSLPFSYLGIPIGANPRRRETWDPII 6
>BI972659
Length = 453
Score = 97.8 bits (242), Expect = 1e-20
Identities = 52/142 (36%), Positives = 80/142 (55%)
Frame = +1
Query: 80 VGVKSWANVRALRAVLLLLR*CRSGLKMNFHKSLLVGVNVSESWLNEATTMLGCKVGKVP 139
VG SW N+ L+++L SGL++N+ KS V +W ++A +L C+ +P
Sbjct: 1 VGEASWDNIIVLKSMLRGFE-MVSGLRINYAKSQFGIVGFQPNWAHDAAQLLNCRQLDIP 177
Query: 140 FLYLGLSIGGDPRRLLFWESVVDRVKKRLSGWRSKFLSFGGRLVLLKVFLSSLHVYALSF 199
F YLG+ I + WE ++++ K +LS W K+LS GGR+ L+K L++L +Y LSF
Sbjct: 178 FHYLGMPIAVKASSRMVWEPLINKFKAKLSKWNQKYLSMGGRVTLIKSVLNALPIYLLSF 357
Query: 200 FRAPSGIISTLESLFINFFLVG 221
F+ P I+ L SL F G
Sbjct: 358 FKIPQRIVDKLVSLQRTFMWGG 423
>AI496436
Length = 414
Score = 93.6 bits (231), Expect = 2e-19
Identities = 44/105 (41%), Positives = 66/105 (61%)
Frame = +1
Query: 103 SGLKMNFHKSLLVGVNVSESWLNEATTMLGCKVGKVPFLYLGLSIGGDPRRLLFWESVVD 162
SGLK+NF KS + S+ W EA L V +PF+YLG+ IG + R WE VV
Sbjct: 28 SGLKINFAKSQFGTICKSDIWRKEAADYLNSSVLSMPFVYLGIPIGANSRHSDVWEPVVR 207
Query: 163 RVKKRLSGWRSKFLSFGGRLVLLKVFLSSLHVYALSFFRAPSGII 207
+ +++L+ W+ K++SFGGR+ L+ L++L +Y LSFFR P ++
Sbjct: 208 KCERKLASWKQKYVSFGGRVTLINSVLTALPIYLLSFFRIPDKVV 342
>CO979823
Length = 853
Score = 76.3 bits (186), Expect = 3e-14
Identities = 49/154 (31%), Positives = 74/154 (47%), Gaps = 9/154 (5%)
Frame = -2
Query: 374 GWQ----WRRRLW----AWEEELLGECRILLSDITLQHTDRWVWRLDPSNGYSVNGVYQM 425
GW+ WRR A + LGE I I Q D+W+W+ +P YS Y +
Sbjct: 813 GWE*QLNWRRPXXDSEIAMADSFLGE--ITQQQIHPQREDKWLWKPEPGGHYSTKSGYHV 640
Query: 426 LTSQPVQT-SEVLLDLIWHKQVPLKVSIFAWRLLQNRLPTKDNLCVHGVIPHSHDNQHCV 484
L + + + IW ++P K ++FAWRL+++RLPTK NL V+ + C
Sbjct: 639 LWGELTEEIQDADFAEIWKLKIPTKAAVFAWRLVRDRLPTKSNLRRRQVMV---QDMVCP 469
Query: 485 IGCGDFETAQHLFRSCPFYVALWGQIRSWLGIAT 518
+ E A HLF +C + LW + SW+ + T
Sbjct: 468 LCNNIEEGAAHLFFNCTKTLPLWWESMSWVNLKT 367
>TC222557
Length = 1002
Score = 59.3 bits (142), Expect(2) = 3e-14
Identities = 33/85 (38%), Positives = 46/85 (53%)
Frame = +1
Query: 429 QPVQTSEVLLDLIWHKQVPLKVSIFAWRLLQNRLPTKDNLCVHGVIPHSHDNQHCVIGCG 488
Q ++ E L DL W ++PLK + FAWRL++ R+PTK NL V +N C
Sbjct: 406 QLIRLDEALEDL-WQLKIPLKATTFAWRLIKERIPTKGNLWRRRV---QLNNLMCPFCNR 573
Query: 489 DFETAQHLFRSCPFYVALWGQIRSW 513
E A HLF +CP + LW + +W
Sbjct: 574 QEEEASHLFFNCPRILPLWWESLAW 648
Score = 37.0 bits (84), Expect(2) = 3e-14
Identities = 22/76 (28%), Positives = 35/76 (45%), Gaps = 5/76 (6%)
Frame = +3
Query: 356 SINLFRWQICVS*DEMKGGWQWRRRLWAWEEELLGECRILLSDITLQHTDRW-----VWR 410
S N++ W++ +WRR L+ E + L DI+ H DRW VW+
Sbjct: 210 SANVWEWKL-----------EWRRHLFDNEVQAAAS---FLDDISWGHIDRWTLDCWVWK 347
Query: 411 LDPSNGYSVNGVYQML 426
+P+ +S Y+ML
Sbjct: 348 PEPNGQFSTRSAYRML 395
>TC231922
Length = 803
Score = 75.9 bits (185), Expect = 4e-14
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Frame = -3
Query: 375 WQWRRRLWAWEEELLGECRILLSDITLQHT--DRWVWRLDPSNGYSVNGVYQMLT-SQPV 431
++WRRRL+ +E + + +S I++Q+ D W+ D S YS Y++L S
Sbjct: 540 FKWRRRLFDYEYAMAVDFMNEISGISIQNQAHDSMFWKADSSGVYSTKSAYRLLMPSISP 361
Query: 432 QTSEVLLDLIWHKQVPLKVSIFAWRLLQNRLPTKDNLCVHGVIPHSHDNQHCVIGCGDFE 491
S + ++WH ++P + ++F+WRL +RLPT+ NL + D + GC E
Sbjct: 360 APSRRIFQILWHLKIPPRAAVFSWRLFLDRLPTRGNLSRRSI--PIQDIMCPLCGC-QHE 190
Query: 492 TAQHLFRSCPFYVALWGQIRSWLGI 516
A HLF C LW + W+ +
Sbjct: 189 EAGHLFFHCKMTKGLWWESMRWIRV 115
>TC213061
Length = 823
Score = 75.9 bits (185), Expect = 4e-14
Identities = 51/152 (33%), Positives = 76/152 (49%), Gaps = 11/152 (7%)
Frame = +2
Query: 374 GW----QWRRRLWAWEEELLG------ECRILLSDITLQHTDRWVWRLDPSNGYSVNGVY 423
GW QWRR L+ E E+L E + SDI D+WVW + S Y Y
Sbjct: 17 GWEWQFQWRRPLFDSEIEMLVAFIQEVEGHKIRSDIE----DQWVWAAESSGSYLARSAY 184
Query: 424 QMLTSQ-PVQTSEVLLDLIWHKQVPLKVSIFAWRLLQNRLPTKDNLCVHGVIPHSHDNQH 482
+++ P + + +W +VP+KV++FAWRLL++ LPT+DNL V H +
Sbjct: 185 RVIREGIPEEEQDREFKELWKLKVPMKVTMFAWRLLKDILPTRDNLRRKRVELHEY---V 355
Query: 483 CVIGCGDFETAQHLFRSCPFYVALWGQIRSWL 514
C + E+A HLF C + +W + SW+
Sbjct: 356 CPLCRSMDESASHLFFHCSKILPIWWESLSWV 451
>TC231841
Length = 791
Score = 75.1 bits (183), Expect = 7e-14
Identities = 37/116 (31%), Positives = 62/116 (52%), Gaps = 1/116 (0%)
Frame = +3
Query: 402 QHTDRWVWRLDPSNGYSVNGVYQMLTSQPVQTSEV-LLDLIWHKQVPLKVSIFAWRLLQN 460
Q D+WVW+ DPS Y+ Y +L + + + + + +W ++P K++IFAWRL+++
Sbjct: 54 QQGDQWVWKADPSGQYTAKSAYGVLWGEMFEEQQDGVFEELWKLKLPSKITIFAWRLIRD 233
Query: 461 RLPTKDNLCVHGVIPHSHDNQHCVIGCGDFETAQHLFRSCPFYVALWGQIRSWLGI 516
RLPT+ NL + D+ C E+A HLF C +W + SW+ +
Sbjct: 234 RLPTRSNLRRKQI---EVDDPRCPFCRSAEESAAHLFFHCSRIAPVWWESLSWVNL 392
>BI316892
Length = 421
Score = 74.3 bits (181), Expect = 1e-13
Identities = 34/98 (34%), Positives = 56/98 (56%), Gaps = 3/98 (3%)
Frame = +1
Query: 379 RRLWAWEEELLGECRILLSDITLQHT--DRWVWRLDPSNGYSVNGVYQMLT-SQPVQTSE 435
R + WE L+ + +LL+ + + H+ D WVW P+ Y+ Y +L+ P+Q S
Sbjct: 127 REGFEWENYLIQQLFLLLNSVIIHHSLADSWVWEPCPTGRYTSKSAYLLLSCDSPLQYST 306
Query: 436 VLLDLIWHKQVPLKVSIFAWRLLQNRLPTKDNLCVHGV 473
+ ++W ++P K S W++L+NRLPTKDNLC +
Sbjct: 307 NIFVVLWRLKIPHKTSFLIWKILRNRLPTKDNLCKQNI 420
>CO984521
Length = 716
Score = 73.6 bits (179), Expect = 2e-13
Identities = 42/114 (36%), Positives = 59/114 (50%), Gaps = 1/114 (0%)
Frame = -2
Query: 404 TDRWVWRLDPSNGYSVNGVYQMLTSQPV-QTSEVLLDLIWHKQVPLKVSIFAWRLLQNRL 462
+D+W W +PS YS Y+ L V + + +W +VPLKV+IFAWRL+Q++L
Sbjct: 649 SDQWKWAAEPSGCYSTKSAYKALHHVTVGEEQDGKFKELWKLRVPLKVAIFAWRLIQDKL 470
Query: 463 PTKDNLCVHGVIPHSHDNQHCVIGCGDFETAQHLFRSCPFYVALWGQIRSWLGI 516
PTK NL V C + ETA HLF C LW + +SW+ +
Sbjct: 469 PTKANLRKKRV---ELQEYLCPLCRSVEETASHLFFHCSKVSPLWWESQSWVNM 317
>TC233392
Length = 1145
Score = 71.6 bits (174), Expect = 8e-13
Identities = 40/119 (33%), Positives = 60/119 (49%), Gaps = 1/119 (0%)
Frame = -1
Query: 397 SDITLQHTDRWVWRLDPSNGYSVNGVYQMLTSQ-PVQTSEVLLDLIWHKQVPLKVSIFAW 455
+ I Q D WVW+ +P+ YS Y++L + + L +W ++P K SIFAW
Sbjct: 680 AQIQQQVPDTWVWKHEPNELYSTRSAYKLLQGHLEGEDQDGALQDLWKLKIPAKASIFAW 501
Query: 456 RLLQNRLPTKDNLCVHGVIPHSHDNQHCVIGCGDFETAQHLFRSCPFYVALWGQIRSWL 514
RL+++RLPTK NL V+ C I E A H+F C LW + ++W+
Sbjct: 500 RLIRDRLPTKSNLHRRQVVLEDSLCPFCRI---REEDASHIFLECNKIRPLWWESQTWV 333
>TC233956
Length = 757
Score = 70.1 bits (170), Expect = 2e-12
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +2
Query: 405 DRWVWRLDPSNGYSVNGVYQMLTSQPVQTSEVL-LDLIWHKQVPLKVSIFAWRLLQNRLP 463
D WVWR + + S YQ++ S+ + L +W +VP K F WRLL +RLP
Sbjct: 59 DTWVWRAESTGIISTKSAYQVIKSELDDEGQHLGFKKLWEIKVPPKALSFVWRLLWDRLP 238
Query: 464 TKDNLCVHGVIPHSHDNQHCVIGCGDFETAQHLFRSCPFYVALWGQIRSWL 514
TKDNL + ++ C ETA HLF +C + LW + SW+
Sbjct: 239 TKDNLIKRQI---QVEDDLCPFCHSQSETASHLFFTCGKIMPLWWEFLSWV 382
>TC221865
Length = 1045
Score = 70.1 bits (170), Expect = 2e-12
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Frame = -3
Query: 375 WQWRRRLWAWE-EELLGECRILLSDITL----QH-TDRWVWRLDPSNGYSVNGVYQMLTS 428
+QWRR L+ E + +G L DI+ +H TD WVW+ +P+ YS Y ++
Sbjct: 764 FQWRRPLFDNEVDTTIG----FLEDISRFPIHRHLTDCWVWKSEPNGHYSTRSAYHLMQH 597
Query: 429 QPVQTS-EVLLDLIWHKQVPLKVSIFAWRLLQNRLPTKDNLCVHGVIPHSHDNQHCVIGC 487
+ + + + + IW ++P K +IFA RL+++RLPTK+NL V N + C
Sbjct: 596 EAAKANTDPAFEEIWKLKIPAKAAIFA*RLVKDRLPTKNNLRRRQV----QLNGTLCLFC 429
Query: 488 GDF-ETAQHLFRSCPFYVALWGQIRSWL 514
++ E A HLF SC +W + SW+
Sbjct: 428 RNYEEEASHLFFSCTKTQPVWWESLSWI 345
>BG404993
Length = 412
Score = 68.6 bits (166), Expect = 7e-12
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = -3
Query: 396 LSDITLQHTDRWVWRLDPSNGYSVNGVYQMLTSQPVQTSEV-LLDLIWHKQVPLKVSIFA 454
LS I D W W+ DPS YS Y++L +E + +W ++P K +F
Sbjct: 359 LSTIQQHEADSWTWKADPSGNYSTKTAYELLQEAIRGDNEDGIFVQLWKLKIPPKAPVFT 180
Query: 455 WRLLQNRLPTKDNLCVHGVIPHSHDNQHCVIGCGDFETAQHLFRSCPFYVALWGQIRSWL 514
WRL+ +RLPTK NL V + C + E A HLF +C + W + SW+
Sbjct: 179 WRLINDRLPTKVNLRRRQV---EISDSLCPLCNNSEEDAAHLFFNCNKTLPFWWESLSWV 9
>CA851073
Length = 633
Score = 68.6 bits (166), Expect = 7e-12
Identities = 36/110 (32%), Positives = 55/110 (49%), Gaps = 1/110 (0%)
Frame = +1
Query: 405 DRWVWRLDPSNGYSVNGVYQMLTSQPVQTSEV-LLDLIWHKQVPLKVSIFAWRLLQNRLP 463
D VW+ DP YS Y++L + SE + IW ++P + ++F+WRL+++RLP
Sbjct: 28 DTMVWKADPCGVYSTKSAYRILMTCNRHVSEANIFKTIWKLKIPPRAAVFSWRLIKDRLP 207
Query: 464 TKDNLCVHGVIPHSHDNQHCVIGCGDFETAQHLFRSCPFYVALWGQIRSW 513
T+ NL V S C + + E A HLF +C LW + W
Sbjct: 208 TRHNLLRRNV---SIQENECPLCGYEQEEADHLFFNCKMTRGLWWESMRW 348
>BI973267
Length = 406
Score = 67.0 bits (162), Expect = 2e-11
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 393 RILLSDITLQHTDRWVWRLDPSNGYSVNGVYQMLTSQPVQTSEVL-LDLIWHKQVPLKVS 451
+I S + + D W WR + + ++ YQ+L S+ + + + ++P K
Sbjct: 25 QIHASSLNINLKDTWTWRAEANGEFTTKSTYQVLQSELDDQGQYEGFQQLCNIKIPPKAL 204
Query: 452 IFAWRLLQNRLPTKDNLCVHGVIPHSHDNQHCVIGCGDFETAQHLFRSCPFYVALWGQIR 511
FAWRLL +RLPTKDNL + +N C ETA HLF C + +W +
Sbjct: 205 SFAWRLL*DRLPTKDNLVKRQI---QVENDLCPFCHNQPETASHLFFKCDKIMPMWWEFF 375
Query: 512 SWL 514
SW+
Sbjct: 376 SWI 384
>BG239687
Length = 443
Score = 66.6 bits (161), Expect = 2e-11
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = -3
Query: 377 WRRRLWAWEEELLGEC--RILLSDITLQHTDRWVWRLDPSNGYSVNGVYQMLTSQPVQTS 434
W R L+ WE EL+ + + L ++ D WVW+ + S GY+V Y ++ +
Sbjct: 318 WGRNLFEWERELVAKFLEELHLVEVK*NEEDSWVWKSNESGGYNVRDAYMLILHDGLVDE 139
Query: 435 EV-LLDLIWHKQVPLKVSIFAWRLLQNRLPTKDNL 468
+L +W +P V+ F+W LLQ+R+ TK+NL
Sbjct: 138 HANILKQVWKASIPSNVAAFSWSLLQDRIQTKENL 34
>CO986021
Length = 900
Score = 62.8 bits (151), Expect = 4e-10
Identities = 43/144 (29%), Positives = 73/144 (49%), Gaps = 5/144 (3%)
Frame = -1
Query: 375 WQWRRRLWAWEEELLGECRILLSDITL--QHTDRWVWRLDPSNGYSVNGVYQML--TSQP 430
++WRR L+ E E +S I++ Q D +W+ DP+ YS Y++L ++P
Sbjct: 879 FKWRRNLFDHENEQAIAFMDDISAISIHQQLQDSMLWKADPTGIYSTKSAYRLLLPNNRP 700
Query: 431 VQTSEVLLDLIWHKQVPLKVSIFAWRLLQNRLPTKDNLCVHGVIPHSHDNQHCVIGCGDF 490
Q S ++W ++P + +F+WRL ++RL + NL V + + C + CG+
Sbjct: 699 GQHSSNF-KILWKLKIPPRAELFSWRLFRDRLSIRANLLRRHV---ALQDIMCPL-CGNH 535
Query: 491 -ETAQHLFRSCPFYVALWGQIRSW 513
E A HLF C + LW + +W
Sbjct: 534 QEEAGHLFFHCRMTIGLWWESMNW 463
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.338 0.150 0.517
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,998,304
Number of Sequences: 63676
Number of extensions: 508111
Number of successful extensions: 4311
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 4130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4248
length of query: 518
length of database: 12,639,632
effective HSP length: 102
effective length of query: 416
effective length of database: 6,144,680
effective search space: 2556186880
effective search space used: 2556186880
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC143339.8