BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142526.4 + phase: 0
(187 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC222036 similar to PIR|E96668|E96668 protein F1N19.3 [imported]... 273 3e-74
BI699875 similar to PIR|E96668|E96 protein F1N19.3 [imported] - ... 202 7e-53
TC209921 similar to PIR|E96668|E96668 protein F1N19.3 [imported]... 133 4e-32
BE804723 similar to PIR|E96668|E966 protein F1N19.3 [imported] -... 86 1e-17
TC217378 76 1e-14
TC205403 similar to UP|Q08529 (Q08529) Glycine-rich protein, par... 55 2e-08
TC230817 similar to UP|Q6MWW7 (Q6MWW7) PE-PGRS FAMILY PROTEIN (F... 53 7e-08
BE805371 52 1e-07
TC221290 weakly similar to UP|Q9SHY5 (Q9SHY5) F1E22.7, partial (... 48 2e-06
TC207093 47 7e-06
TC229268 similar to GB|BAB32889.1|13122296|AB047812 hin1 homolog... 42 1e-04
TC214012 weakly similar to UP|Q8S8Z8 (Q8S8Z8) Syringolide-induce... 42 2e-04
AI442341 40 5e-04
TC216388 similar to UP|Q8H1B5 (Q8H1B5) Hin1-like protein, partia... 40 8e-04
TC208827 UP|Q8S8Z8 (Q8S8Z8) Syringolide-induced protein B13-1-9,... 39 0.001
TC216389 weakly similar to UP|Q9M663 (Q9M663) Harpin inducing pr... 39 0.002
TC214631 weakly similar to GB|AAL31248.1|16974489|AY061921 At2g2... 38 0.002
TC229463 weakly similar to UP|O81329 (O81329) F3D13.5 protein, p... 38 0.002
TC208149 homologue to UP|Q8S8Z8 (Q8S8Z8) Syringolide-induced pro... 38 0.002
CD487721 GP|4689382|gb| chlorophyll a/b binding protein CP29 {Vi... 38 0.002
>TC222036 similar to PIR|E96668|E96668 protein F1N19.3 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(48%)
Length = 622
Score = 273 bits (698), Expect = 3e-74
Identities = 135/182 (74%), Positives = 155/182 (84%), Gaps = 4/182 (2%)
Frame = +3
Query: 10 PSNRTNLASCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNF 69
P NRTNLASC VATVFLIF+LI++F +YFT+FKPQ PKI+V+A+Q+PSF+ TN TVNF
Sbjct: 39 PENRTNLASCFVATVFLIFLLIVVFIVYFTVFKPQYPKIAVSAIQIPSFSATNG--TVNF 212
Query: 70 TFSQYTSVKNPNRGTFSHYDSSFQLLSYGKQIGFMFVPAGKINARRTQFMAATFTVQSLP 129
TFSQY SV+NPNRGTFSHYDSS QLL YG+Q+GFMFVPAGKI A RTQ+MAATFTVQS P
Sbjct: 213 TFSQYASVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAGKIAAGRTQYMAATFTVQSFP 392
Query: 130 LNLEPEGL----QMGPTVEIESTIEMVGRVRVLHLFSHHVEAKADCRVAIAVSDGSVLGF 185
L L P + +GPT+E+ES IEM GRVRVLHLFSHHVEAKA CRVAIA++DGSVLGF
Sbjct: 393 LGLGPTSVDGPSSVGPTMEMESRIEMAGRVRVLHLFSHHVEAKAQCRVAIAINDGSVLGF 572
Query: 186 HC 187
C
Sbjct: 573 RC 578
>BI699875 similar to PIR|E96668|E96 protein F1N19.3 [imported] - Arabidopsis
thaliana, partial (37%)
Length = 421
Score = 202 bits (514), Expect = 7e-53
Identities = 104/147 (70%), Positives = 121/147 (81%), Gaps = 4/147 (2%)
Frame = +1
Query: 16 LASCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYT 75
LASC VAT+FLIF+LI++F +YFT+FKPQDPKI+V+AVQ+PSF+ TN TVNFTFSQY
Sbjct: 1 LASCFVATIFLIFLLIVVFIVYFTVFKPQDPKIAVSAVQIPSFSATNG--TVNFTFSQYA 174
Query: 76 SVKNPNRGTFSHYDSSFQLLSYGKQIGFMFVPAGKINARRTQFMAATFTVQSLPLNLEPE 135
SV+NPNRGTFSHYDSS QLL YG+Q+GFMFVPAG RTQ+MAATFTVQS PL L P
Sbjct: 175 SVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAG-----RTQYMAATFTVQSFPLGLGPP 339
Query: 136 GL----QMGPTVEIESTIEMVGRVRVL 158
+ +GPT+EIES IEM GRVRVL
Sbjct: 340 FVDGPSNVGPTMEIESRIEMAGRVRVL 420
>TC209921 similar to PIR|E96668|E96668 protein F1N19.3 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(29%)
Length = 494
Score = 133 bits (335), Expect = 4e-32
Identities = 67/112 (59%), Positives = 83/112 (73%), Gaps = 15/112 (13%)
Frame = +3
Query: 91 SFQLLSYGKQIGFMFVPAGKINARRTQFMAATFTVQSLPLNLEPE--------------- 135
S QL+ G Q+GFMF+PAG+I+A RTQ+MAATF+VQS PL++ P
Sbjct: 3 SLQLIYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPLSVPPRMGPTLANGDGVGFNY 182
Query: 136 GLQMGPTVEIESTIEMVGRVRVLHLFSHHVEAKADCRVAIAVSDGSVLGFHC 187
GL++ PT+EIES +EM GRV+VLH F+HHV AKA CRVAIAV+DGSVLGFHC
Sbjct: 183 GLRVEPTMEIESKLEMAGRVKVLHFFTHHVYAKAGCRVAIAVTDGSVLGFHC 338
>BE804723 similar to PIR|E96668|E966 protein F1N19.3 [imported] - Arabidopsis
thaliana, partial (16%)
Length = 299
Score = 85.5 bits (210), Expect = 1e-17
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 136 GLQMGPTVEIESTIEMVGRVRVLHLFSHHVEAKADCRVAIAVSDGSVLGFHC 187
GL++ PT+EIES +EM GRV+VLH F+HHV AKA CRVAIAV+DGSVLGFHC
Sbjct: 78 GLRVEPTLEIESKLEMAGRVKVLHFFTHHVYAKAGCRVAIAVTDGSVLGFHC 233
>TC217378
Length = 1230
Score = 75.9 bits (185), Expect = 1e-14
Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
Frame = +3
Query: 19 CLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTV----NFTFSQY 74
CL T +I I+++I L T+FK + P +V + +L F+++ + + N T
Sbjct: 417 CLTVTGVVIAIVLLIVILALTVFKAKHPVTTVDSTKLEDFHVSLDPVKLRVDLNVTLGVD 596
Query: 75 TSVKNPNRGTFSHYDSSFQLLSYGKQIGFMFVPAGKINARRTQFMAATFTVQSLPLNLEP 134
SVKNPN+ F + DS+ L G+ IG + + AG+I++ T+ T T+ + L
Sbjct: 597 VSVKNPNKVGFQYSDSAAHLNYRGQLIGEVPISAGEISSGETKGFNLTHTIMADRLLSNS 776
Query: 135 EGLQ--MGPTVEIESTIEMVGRVRVLHLFSHHVEAKADCRVAIAVSDGSVLGFHC 187
+ L T+ + + + M G+V +L HV + C VAI +S+G+V C
Sbjct: 777 QLLSDVTSGTLPLNTFVRMSGKVSILGFIKVHVVSSTSCDVAINLSNGTVGNQEC 941
>TC205403 similar to UP|Q08529 (Q08529) Glycine-rich protein, partial (15%)
Length = 1184
Score = 54.7 bits (130), Expect = 2e-08
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +2
Query: 20 LVATVFLIFILI-IIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYTSVK 78
L+ TV ++ +LI + T+++ L++P P +VT+++L NLT++S T+N F S
Sbjct: 323 LILTVLILLLLIGVAGTVFYLLYRPHHPTFTVTSLKLSYLNLTSSSNTLNSRFDITVSAT 502
Query: 79 NPNRGTFSHYD-SSFQLLSYGKQIGFMFVP 107
NPN+ YD +S +LS +G VP
Sbjct: 503 NPNKKILFAYDPTSITILSADIDLGDGTVP 592
>TC230817 similar to UP|Q6MWW7 (Q6MWW7) PE-PGRS FAMILY PROTEIN (Fragment),
partial (3%)
Length = 1064
Score = 53.1 bits (126), Expect = 7e-08
Identities = 36/110 (32%), Positives = 55/110 (49%), Gaps = 4/110 (3%)
Frame = -3
Query: 19 CLVATVFLIFILIIIF---TLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYT 75
C + L+F+L+++ T+ + L++PQ P SVT+++L SFNLT S T+N F
Sbjct: 906 CCWLLLILLFLLLLVGAAGTVLYFLYRPQRPTFSVTSLKLSSFNLTTPS-TINAKFDLTL 730
Query: 76 SVKNPNRGTFSHYDSSFQLLSYG-KQIGFMFVPAGKINARRTQFMAATFT 124
S NPN YD + L YG + +P+ R T + A T
Sbjct: 729 STTNPNDKIIFSYDPTSVSLLYGDTAVASTTIPSFLHRQRNTTVLQAYVT 580
>BE805371
Length = 420
Score = 52.4 bits (124), Expect = 1e-07
Identities = 30/77 (38%), Positives = 47/77 (60%), Gaps = 1/77 (1%)
Frame = +3
Query: 16 LASCL-VATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQY 74
L CL V+++FLI + I+I TL T+FKP++P I + V L +F L + +TT +
Sbjct: 111 LKICLAVSSLFLIILAIVIVTLILTIFKPKNPDIFLHPVDLENFQLLSPNTT-SAPLGIV 287
Query: 75 TSVKNPNRGTFSHYDSS 91
++ NPN G F + +SS
Sbjct: 288 ITIVNPNYGNFKYVNSS 338
>TC221290 weakly similar to UP|Q9SHY5 (Q9SHY5) F1E22.7, partial (68%)
Length = 916
Score = 48.1 bits (113), Expect = 2e-06
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Frame = +3
Query: 6 HETPPSNRTNLAS---CLVATVFLIFILIIIFTL--YFTLFKPQDPKISVTAVQLPSFNL 60
H PP R + C ++ LI I+ I T+ + +F+P+ PK SV +++ FN+
Sbjct: 249 HSKPPKRRRSCCCRFMCWTLSILLILIIAIAITIGILYLVFRPKLPKYSVDQLRISQFNV 428
Query: 61 TNNSTTVNFTFSQYTSVKNPNRGTFSHYDSSFQLLSY--GKQIGFMFVPAGKINARRTQF 118
++N+ T+ TF+ + +NPN+ +Y+ + ++ Q+ +P R T
Sbjct: 429 SDNN-TLYATFNVAITARNPNKKIGIYYEGGSHISAWYMETQLCEGSLPKFYQGHRNTTV 605
Query: 119 MAATFTVQSLP----LNLEPEGLQMGPTVEIESTIEMVGRVRVLHLFSHHVEAKADCRVA 174
+ T Q+ +N E LQ V + + RV++ L V+ + C++
Sbjct: 606 LDLPLTGQAHDANGLVNRIQEQLQQTNNVPLNLKVNQPVRVKLGKLKLFKVKFRVRCKLE 785
Query: 175 I 175
+
Sbjct: 786 V 788
>TC207093
Length = 863
Score = 46.6 bits (109), Expect = 7e-06
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Frame = +2
Query: 19 CLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNL-TNNSTTVNFTFSQYTSV 77
C++ + L L++ + L P DP+I + ++L + TN ++ +FS +V
Sbjct: 284 CIIYSAALFLFLLVAGAAF--LLYPSDPEIRLARIRLDRIGIRTNPRPILDLSFS--LTV 451
Query: 78 KNPNRGTFS-HYDSSFQLLSY-GKQIGFMFV-PAGKINARRTQFMAATFTVQSLPLNLEP 134
K NR FS YDS + Y G+Q+GF+ G I AR + ++ AT T+ + +
Sbjct: 452 KVRNRDFFSLSYDSLTVSVGYRGRQLGFVTAGGGGSIRARGSSYVDATLTIDGFEVIYDA 631
Query: 135 ----EGLQMGPTVEIESTIEMVGRVRVLHLFSHHVEAKADCRVAIAVSDGSVLGFHC 187
E + G + ++ + G++ L F+ ++A C V + ++ +++ C
Sbjct: 632 FYLLEDIAKG-VIPFDTDTRVEGKLG-LFFFTVPLKATVSCEVDVNINQQTIVRQDC 796
Score = 26.9 bits (58), Expect = 5.5
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = +3
Query: 9 PPSNRTNLASCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVN 68
PP+ L L T LI ILI+I TL L S V + S S+T
Sbjct: 123 PPTLTLTLTLTLTPTPTLIPILILITTLTLILTPKTSSFCSPPTVPISSVVAAAASSTPR 302
Query: 69 FTFSQYTSVKNPNRGT 84
+ S +S+ P+ T
Sbjct: 303 HSSSSSSSLAPPSSST 350
>TC229268 similar to GB|BAB32889.1|13122296|AB047812 hin1 homolog
{Arabidopsis thaliana;} , partial (31%)
Length = 1043
Score = 42.4 bits (98), Expect = 1e-04
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Frame = +2
Query: 19 CLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYTSVK 78
C + T LI + I+ F +F + +P K VT L F+ T N+T +++ + S++
Sbjct: 242 CKILTTILIIVAILGFLFWF-IVRPNVLKFHVTDASLTRFDYTTNNT-LHYDLALNVSIR 415
Query: 79 NPNRGTFSHYD-----SSFQLLSYGKQ-IGFMFVPAGKINARRTQFMAATFTVQSL-PL- 130
NPNR +YD + +Q + +G Q +G F + + T F+ F Q + PL
Sbjct: 416 NPNRRVGVYYDHIEAHALYQDVLFGNQTLGPFFQ-----HHKNTTFVNPLFKGQRVTPLA 580
Query: 131 --NLEPEGLQMGPTV-EIESTIEMVGRVRVLHLFSHHVEAKADCRVAI 175
+E + G V I+ + MV R + L S V+ K C + +
Sbjct: 581 GNQVEVFDKEKGSGVYTIDLKLFMVVRFKFLLFKSASVKPKIRCALHV 724
>TC214012 weakly similar to UP|Q8S8Z8 (Q8S8Z8) Syringolide-induced protein
B13-1-9, partial (52%)
Length = 446
Score = 41.6 bits (96), Expect = 2e-04
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +2
Query: 26 LIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYTSV-----KNP 80
++ L+++F +++ + +P+ K+ VT +L FNLT N+ N +Y V +NP
Sbjct: 164 IVVFLVVVFLVFWAVVQPRTFKLHVTDAKLTQFNLTTNNNN-NINMLRYNLVLNLTARNP 340
Query: 81 NRGTFSHYDSSFQLLSYGKQIGFMFVPAGKINARRT 116
N+ +YD +SY G F A I R +
Sbjct: 341 NKKLNIYYDQVEGHVSYE---GMRFASADLITWRNS 439
>AI442341
Length = 410
Score = 40.4 bits (93), Expect = 5e-04
Identities = 26/87 (29%), Positives = 41/87 (46%), Gaps = 3/87 (3%)
Frame = +3
Query: 17 ASCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNN---STTVNFTFSQ 73
A C T+FL+ + + L+ +++P P+ +V + N T STTV F+
Sbjct: 45 AVCTGITIFLLLAGVTLLVLWL-VYRPHKPRFTVIGAAVYDLNTTTPPLMSTTVQFS--- 212
Query: 74 YTSVKNPNRGTFSHYDSSFQLLSYGKQ 100
+KNPNR +YD +SY Q
Sbjct: 213 -VLIKNPNRRVSIYYDRFSAFVSYRNQ 290
>TC216388 similar to UP|Q8H1B5 (Q8H1B5) Hin1-like protein, partial (43%)
Length = 1056
Score = 39.7 bits (91), Expect = 8e-04
Identities = 22/76 (28%), Positives = 40/76 (51%), Gaps = 5/76 (6%)
Frame = +3
Query: 19 CLVATVFLIFILIIIFT-----LYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQ 73
CL + +F + + +II L++ + +P K VT L FN T N+T +++ +
Sbjct: 195 CLFSLIFKLILTVIIIIGIAVFLFWLIVRPNVVKFHVTEATLTQFNYTPNNT-LHYDLAL 371
Query: 74 YTSVKNPNRGTFSHYD 89
+V+NPN+ +YD
Sbjct: 372 NITVRNPNKRLGIYYD 419
>TC208827 UP|Q8S8Z8 (Q8S8Z8) Syringolide-induced protein B13-1-9, complete
Length = 768
Score = 38.9 bits (89), Expect = 0.001
Identities = 19/74 (25%), Positives = 38/74 (50%)
Frame = +2
Query: 24 VFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYTSVKNPNRG 83
V LI ++ ++F +++ + +P+ K VT L F+ N+ T+++ + +NPN+
Sbjct: 221 VALIVLVGLVFLIFWLVVQPRSFKFQVTEADLTQFDYYTNNHTLHYNMVLNFTARNPNKK 400
Query: 84 TFSHYDSSFQLLSY 97
+YD L Y
Sbjct: 401 LSIYYDKVEALAFY 442
>TC216389 weakly similar to UP|Q9M663 (Q9M663) Harpin inducing protein
(Hin1), partial (62%)
Length = 667
Score = 38.5 bits (88), Expect = 0.002
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = +2
Query: 19 CLVATVFLIFILIIIFT-----LYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQ 73
CL + +F + + +II +++ + +P K VT L FN T N+T +++ +
Sbjct: 155 CLFSLIFKLILTVIIIVGIAGFVFWLIVRPNVVKFHVTDATLTQFNYTANNT-LHYDLAL 331
Query: 74 YTSVKNPNRGTFSHYD 89
+V+NPN+ +YD
Sbjct: 332 NITVRNPNKRLGIYYD 379
>TC214631 weakly similar to GB|AAL31248.1|16974489|AY061921
At2g27080/T20P8.13 {Arabidopsis thaliana;} , partial
(22%)
Length = 1068
Score = 38.1 bits (87), Expect = 0.002
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = +3
Query: 13 RTNLASCLVATVFLIFILIIIFTL----YFTLFKPQDPKISVTAVQLPSFNLTNNSTTVN 68
R+ C + ++FIL++ + + +F+P++PK S+ + + NLT+ S+T
Sbjct: 66 RSRCCCCFCWLIGILFILVVFLAIAAGVLYLVFRPEEPKYSIENIAVRGINLTSPSSTAA 245
Query: 69 FT--FSQYTSVKNPN 81
+ F+ NPN
Sbjct: 246 MSPVFNVTVKADNPN 290
>TC229463 weakly similar to UP|O81329 (O81329) F3D13.5 protein, partial (66%)
Length = 1212
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/87 (27%), Positives = 41/87 (46%), Gaps = 3/87 (3%)
Frame = +3
Query: 17 ASCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNN---STTVNFTFSQ 73
A C T+FL+ + + L+ +++P P+ +V + N + STT+ F+
Sbjct: 117 AVCTGITIFLLLAGVTLLVLWL-VYRPHKPRFTVIGAAIYGLNTSTPPLMSTTMQFS--- 284
Query: 74 YTSVKNPNRGTFSHYDSSFQLLSYGKQ 100
+KNPNR +YD +SY Q
Sbjct: 285 -VLIKNPNRRVSIYYDRFSAFVSYRNQ 362
>TC208149 homologue to UP|Q8S8Z8 (Q8S8Z8) Syringolide-induced protein
B13-1-9, partial (59%)
Length = 422
Score = 38.1 bits (87), Expect = 0.002
Identities = 23/78 (29%), Positives = 40/78 (50%)
Frame = +3
Query: 20 LVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYTSVKN 79
LVA + L+ + I+IF L + +P+ K VT L F+ +N+ T+++ + +N
Sbjct: 111 LVALIVLVGLAILIFWL---VVQPRYFKFHVTKADLTQFDYYSNNNTLHYNMVLNFTARN 281
Query: 80 PNRGTFSHYDSSFQLLSY 97
PN+ +YD L Y
Sbjct: 282 PNKKLSIYYDKVEALAFY 335
>CD487721 GP|4689382|gb| chlorophyll a/b binding protein CP29 {Vigna
radiata}, partial (16%)
Length = 638
Score = 38.1 bits (87), Expect = 0.002
Identities = 20/78 (25%), Positives = 39/78 (49%), Gaps = 6/78 (7%)
Frame = -1
Query: 13 RTNLASCLVATVFLIFILIIIFTL----YFTLFKPQDPKISVTAVQLPSFNLTNNSTTVN 68
R+ C + ++FIL++ + + +F+P++PK S+ + + NLT+ S+T
Sbjct: 578 RSRCCCCFSWLIGILFILVVFLAIAAGVLYLVFRPEEPKYSIENIAVRGINLTSPSSTAA 399
Query: 69 FT--FSQYTSVKNPNRGT 84
+ F+ NPN T
Sbjct: 398 MSPVFNVTVKADNPNDKT 345
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.324 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,995,590
Number of Sequences: 63676
Number of extensions: 97296
Number of successful extensions: 1081
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of query: 187
length of database: 12,639,632
effective HSP length: 92
effective length of query: 95
effective length of database: 6,781,440
effective search space: 644236800
effective search space used: 644236800
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)
Medicago: description of AC142526.4