BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142396.3 - phase: 0
(432 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC227108 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (P... 292 2e-79
TC205676 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F1... 271 5e-73
CO979856 256 1e-68
TC210603 similar to UP|Q9LHJ9 (Q9LHJ9) Protein phosphatase 2C (A... 256 2e-68
TC230117 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-li... 194 6e-50
TC209271 similar to UP|Q9LHJ9 (Q9LHJ9) Protein phosphatase 2C (A... 182 3e-46
TC207128 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-li... 169 2e-42
BI785873 157 7e-39
TC235162 similar to UP|O82479 (O82479) Protein phosphatase-2c (F... 139 2e-33
TC230225 similar to UP|Q9FG32 (Q9FG32) Protein phosphatase 2C-li... 128 4e-30
BE190873 weakly similar to GP|21536936|gb| protein phosphatase 2... 117 1e-26
TC229438 similar to UP|Q9ZSQ7 (Q9ZSQ7) Protein phosphatase 2C ho... 108 3e-26
TC205675 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F1... 112 4e-25
BE555340 similar to GP|20340237|gb protein phosphatase 2c-like p... 109 2e-24
TC227269 similar to UP|Q8VZD9 (Q8VZD9) AT5g53140/MFH8_8, partial... 103 2e-22
BE473422 similar to GP|13937198|gb| AT4g33920/F17I5_110 {Arabido... 102 3e-22
CF808601 100 1e-21
TC226051 similar to UP|O24078 (O24078) Protein phosphatase 2C, p... 97 2e-20
TC224671 similar to UP|Q8S8Z0 (Q8S8Z0) Protein phosphatase 2C, p... 94 2e-19
BE475454 94 2e-19
>TC227108 similar to UP|Q9M3V0 (Q9M3V0) Protein phosphatase 2C (PP2C) ,
partial (94%)
Length = 1387
Score = 292 bits (748), Expect = 2e-79
Identities = 160/349 (45%), Positives = 220/349 (62%), Gaps = 15/349 (4%)
Frame = +2
Query: 20 FALFDEDPLGRSINLQ------SHCYGEFSSAVVQANTTMEDQSQIE---VASNNA---- 66
F L D GR L H GEFS AV+QAN +EDQSQIE ++SN +
Sbjct: 5 FTLAGSDAGGRQDGLLWYKDSGQHLSGEFSMAVIQANNLLEDQSQIESGCLSSNESGPYG 184
Query: 67 VFLGIYDGHGGTQASRFICEHLFKNLLRFANDNENDITEATLRNAVSATEEGFLDFAKMN 126
F+G+YDGHGG + SRFI +HLF +L RF ++ ++ ++ +R A+ ATEEGF+
Sbjct: 185 TFIGVYDGHGGPETSRFINDHLFHHLKRFTSEQQS-MSVDVIRKALQATEEGFISVVARQ 361
Query: 127 YMHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTMVNK--KIRAEQLTRDHNCNDE 184
+ P + VGSCCL G+I TL++ANLGDSR V+G V ++ A QL+ +HN + E
Sbjct: 362 FSLSPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRAVKATGEVLAMQLSAEHNASIE 541
Query: 185 AIREELRAMHPDDPNVVINDNGSWRVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPE 244
+R+EL A HPDDPN+V+ + WRVKG I VSR+IGD YLK++EF + K + E
Sbjct: 542 TVRQELHASHPDDPNIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRL-RE 718
Query: 245 PFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLST 304
P+ +LS+EP + L +DQFIIFASDGLW+ LSN++A +IVQ +PR+G A+RL+
Sbjct: 719 PYKMPILSSEPSISVHHLQPHDQFIIFASDGLWEHLSNQEAVDIVQNSPRSGSARRLVKA 898
Query: 305 ALAVAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVVFLDKTSFPR 353
AL AAK+R++ Y ++ G RR FHDD +VIVV+LD R
Sbjct: 899 ALQEAAKKREMRYSDLKKIDRG----VRRHFHDDTTVIVVYLDSNLVSR 1033
>TC205676 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17I5_110
{Arabidopsis thaliana;} , partial (81%)
Length = 1793
Score = 271 bits (692), Expect = 5e-73
Identities = 148/319 (46%), Positives = 206/319 (64%), Gaps = 4/319 (1%)
Frame = +2
Query: 33 NLQSHCYGEFSSAVVQANTTMEDQSQIEVASNNAVFLGIYDGHGGTQASRFICEHLFKNL 92
+L+ H G+FS AV QAN +EDQSQ+ S A ++G+YDGHGG +ASRF+ + LF L
Sbjct: 206 DLKPHASGDFSIAVAQANYCLEDQSQV-FTSPYATYVGVYDGHGGPEASRFVNKRLFPYL 382
Query: 93 LRFANDNENDITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKETLHV 152
+FA + + ++ ++ A SATEE FL K++ P + VGSCCL G I L+V
Sbjct: 383 HKFATE-QGGLSVDVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLFGAISNNVLYV 559
Query: 153 ANLGDSRVVIG----TMVNKKIRAEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGSW 208
ANLGDSR V+G N + A++L+ DHN DE +R+E+ A+HPDD ++V+ + G W
Sbjct: 560 ANLGDSRAVLGRRDTVRKNSPVVAQRLSTDHNVADEEVRKEVEALHPDDSHIVVYNRGVW 739
Query: 209 RVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQF 268
R+KG I VSR+IGD YLK+ +F F + P P R V++AEP + R L D F
Sbjct: 740 RIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGN-PIPLKRPVMTAEPSIIIRELESQDLF 916
Query: 269 IIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGRN 328
+IFASDGLW+ LS++ A +IV K+PR GIAKRL+ AL AAK+R++ Y I+ G
Sbjct: 917 LIFASDGLWEQLSDEAAVQIVFKHPRAGIAKRLVRAALHEAAKKREMRYDDIKKIDKG-- 1090
Query: 329 NVSRRSFHDDISVIVVFLD 347
RR FHDDI+V+V++LD
Sbjct: 1091--IRRHFHDDITVVVIYLD 1141
>CO979856
Length = 861
Score = 256 bits (655), Expect = 1e-68
Identities = 131/250 (52%), Positives = 183/250 (72%), Gaps = 2/250 (0%)
Frame = -2
Query: 126 NYMHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTMV-NKKIRAEQLTRDHNCNDE 184
+YM +P + +GSCCL G+IWK TL++ANLGDSR V+G++ + KI AEQLTR+HN E
Sbjct: 857 SYMIKPLIASIGSCCLVGVIWKGTLYIANLGDSRAVVGSLGRSNKIIAEQLTREHNACRE 678
Query: 185 AIREELRAMHPDDPNVVINDNGSWRVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPE 244
IR+ELR++HP D +V+ + G+WRVKG I VSR+IGDAYLK +F+L SFP+ + PE
Sbjct: 677 EIRQELRSLHPQDSQIVVMNRGTWRVKGIIQVSRSIGDAYLKWPQFSLDPSFPRFHM-PE 501
Query: 245 PFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLST 304
P T+ VL+AEP + +RVL +D+F+IFASDGLW++++N++AAEIVQKNPRNG+A++L+
Sbjct: 500 PITQPVLTAEPSLCSRVLQPHDKFLIFASDGLWEYMTNQQAAEIVQKNPRNGVARKLVKA 321
Query: 305 ALAVAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVVFLDKTSFPRQ-PVLNLSYTG 363
AL AA +RK+ Y+++Q G +RR FHDDI+VIVVF+D ++ V LS G
Sbjct: 320 ALKEAANKRKMKYKELQKIEKG----NRRIFHDDITVIVVFIDHELLGKKITVPELSIRG 153
Query: 364 SSDRPVQSDF 373
D S+F
Sbjct: 152 FIDSAGPSNF 123
>TC210603 similar to UP|Q9LHJ9 (Q9LHJ9) Protein phosphatase 2C (At3g12620),
partial (75%)
Length = 883
Score = 256 bits (653), Expect = 2e-68
Identities = 131/281 (46%), Positives = 188/281 (66%), Gaps = 2/281 (0%)
Frame = +2
Query: 68 FLGIYDGHGGTQASRFICEHLFKNLLRFANDNENDITEATLRNAVSATEEGFLDFAKMNY 127
F+GIYDGHGG +A+RF+ + LF N+ +F ++N N ++ + A ATEE FL + +
Sbjct: 59 FVGIYDGHGGPEAARFVNDRLFNNIKKFTSEN-NGMSADVINKAFLATEEEFLSLVEKLW 235
Query: 128 MHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTM--VNKKIRAEQLTRDHNCNDEA 185
+H+P + VGSCCL GII L++AN GDSR V+G + K+I+ QL+ +HN + +
Sbjct: 236 LHKPPIASVGSCCLIGIICSGELYIANAGDSRAVLGRLDEAMKEIKDIQLSVEHNASHAS 415
Query: 186 IREELRAMHPDDPNVVINDNGSWRVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEP 245
+REEL ++HP+DP +V+ + WRVKG I +SR+IGDAYLK++EF PK + EP
Sbjct: 416 VREELHSLHPNDPQIVVMKHQVWRVKGLIQISRSIGDAYLKKAEFNKAPLLPKFRL-SEP 592
Query: 246 FTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLSTA 305
F + +L AEP + + L DQF+I ASDGLW+ LSN++A IVQ PRNG AK+L+ TA
Sbjct: 593 FDQPILKAEPAILVQKLCPQDQFLILASDGLWERLSNQEAVNIVQSCPRNGAAKKLVKTA 772
Query: 306 LAVAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVVFL 346
L AAK+R++ Y ++ G RR FHDDI+VIV++L
Sbjct: 773 LCEAAKKREMRYSDLRKIDRG----VRRHFHDDITVIVLYL 883
>TC230117 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-like protein,
partial (59%)
Length = 888
Score = 194 bits (493), Expect = 6e-50
Identities = 105/235 (44%), Positives = 146/235 (61%), Gaps = 2/235 (0%)
Frame = +3
Query: 130 QPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTMVNKK--IRAEQLTRDHNCNDEAIR 187
+P + G+CCL G+I ++TL VA+LGDSR V+G V + A QL+ +HN N EA+
Sbjct: 15 RPQIATTGTCCLVGVICRQTLFVASLGDSRAVLGRRVGNTGGMAAIQLSTEHNANFEAVM 194
Query: 188 EELRAMHPDDPNVVINDNGSWRVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEPFT 247
EL+ +HP+DP +V+ +G WRVKG I VSR+IGD Y+K ++F RE +PEP
Sbjct: 195 FELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFN-REPINAKFRLPEPMN 371
Query: 248 RGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLSTALA 307
LSA P + + L ND F+IFASDGLW+ LSN +A +IV +P G AK+L+ AL
Sbjct: 372 MPFLSANPTILSHPLQPNDSFLIFASDGLWEHLSNDQAVDIVHSSPCAGSAKKLVKAALQ 551
Query: 308 VAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVVFLDKTSFPRQPVLNLSYT 362
AA++R++ Y + + RR FHDDI+VIV+FL+ R VLN T
Sbjct: 552 EAARKREMRYSDLYKI----DKKVRRHFHDDITVIVLFLNHNLISRGAVLNTPLT 704
>TC209271 similar to UP|Q9LHJ9 (Q9LHJ9) Protein phosphatase 2C (At3g12620),
partial (49%)
Length = 720
Score = 182 bits (462), Expect = 3e-46
Identities = 98/200 (49%), Positives = 131/200 (65%), Gaps = 2/200 (1%)
Frame = +1
Query: 150 LHVANLGDSRVVIGTM--VNKKIRAEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGS 207
L+VAN GDSR V+G + ++ QL+ +HN N + R+E+R HP DP +V+ +
Sbjct: 16 LYVANAGDSRAVLGRVERATRETTTIQLSAEHNVNIQTERDEVRTKHPYDPQIVVMKHNV 195
Query: 208 WRVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQ 267
WRVKG I VSR+IGDAYLK+ EF RE P + EPF++ +LS EP + L DQ
Sbjct: 196 WRVKGIIQVSRSIGDAYLKKDEFN-REPLPNKFRLSEPFSKPILSYEPAISVHKLRPEDQ 372
Query: 268 FIIFASDGLWDFLSNKKAAEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGR 327
FIIFASDGLW+ LSN++ IV +PRNGIA+RL+ AL VAA++R++ +Q G
Sbjct: 373 FIIFASDGLWEQLSNQEVVNIVSNSPRNGIARRLVKAALRVAARKREMRVSDLQKIEQG- 549
Query: 328 NNVSRRSFHDDISVIVVFLD 347
RR FHDDI+VIVVFL+
Sbjct: 550 ---VRRHFHDDITVIVVFLN 600
>TC207128 similar to UP|Q9LSN8 (Q9LSN8) Protein phosphatase 2C-like protein,
partial (49%)
Length = 962
Score = 169 bits (429), Expect = 2e-42
Identities = 90/187 (48%), Positives = 121/187 (64%)
Frame = +2
Query: 172 AEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGSWRVKGFITVSRAIGDAYLKRSEFT 231
A QL+ +HN N EA+R+EL+ +HP DP +V+ +G WRVKG I VSR+IGD YLK ++F
Sbjct: 38 AIQLSTEHNANLEAVRQELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYLKHAQFN 217
Query: 232 LRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQK 291
RE +PEP +LSA P + + L ND F+IFASDGLW+ LSN+KA +IV
Sbjct: 218 -REPLNAKFRLPEPMNMPILSANPTILSHALQPNDSFLIFASDGLWEHLSNEKAVDIVNS 394
Query: 292 NPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVVFLDKTSF 351
NP G AKRL+ AL AA++R++ Y ++ + RR FHDDISVIV+FL+
Sbjct: 395 NPHAGSAKRLIKAALHEAARKREMRYSDLRKI----DKKVRRHFHDDISVIVLFLNHDLI 562
Query: 352 PRQPVLN 358
R VL+
Sbjct: 563 SRGTVLD 583
>BI785873
Length = 421
Score = 157 bits (398), Expect = 7e-39
Identities = 73/136 (53%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
Frame = +2
Query: 103 ITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVI 162
++E +R+AVSATE+GFL + +Y +P + +GSCCL G++WK TL++ANLGDSR VI
Sbjct: 14 MSEDIIRSAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVVWKGTLYIANLGDSRAVI 193
Query: 163 GTMV-NKKIRAEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGSWRVKGFITVSRAIG 221
G++ + KI AEQLT++HN + E +R ELR++HP+D +V+ G+WR+KG I VSR+IG
Sbjct: 194 GSVGRSNKIIAEQLTKEHNASKEEVRRELRSLHPEDSQIVVMKQGTWRIKGIIQVSRSIG 373
Query: 222 DAYLKRSEFTLRESFP 237
DAYLKR EF+ SFP
Sbjct: 374 DAYLKRPEFSFDPSFP 421
>TC235162 similar to UP|O82479 (O82479) Protein phosphatase-2c (Fragment),
partial (47%)
Length = 436
Score = 139 bits (350), Expect = 2e-33
Identities = 71/146 (48%), Positives = 97/146 (65%), Gaps = 2/146 (1%)
Frame = +1
Query: 152 VANLGDSRVVIGTM--VNKKIRAEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGSWR 209
VAN GDSRVV+G + ++ A QL+ +HN N E++R+ELR+ HP D +V+ WR
Sbjct: 1 VANSGDSRVVLGRLERATRETEAIQLSTEHNVNQESVRDELRSKHPFDSQIVVLRQNVWR 180
Query: 210 VKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFI 269
VKG I VSR+IGDAYLK++EF R+ P + E F R +LS +P + L +DQF+
Sbjct: 181 VKGLIQVSRSIGDAYLKKAEFN-RDPLPAKYRLAETFFRPILSCDPSTSSHTLHPDDQFL 357
Query: 270 IFASDGLWDFLSNKKAAEIVQKNPRN 295
IFASDGLW+ L+N++A IV NP N
Sbjct: 358 IFASDGLWEHLTNQEAVNIVSNNPPN 435
>TC230225 similar to UP|Q9FG32 (Q9FG32) Protein phosphatase 2C-like, partial
(39%)
Length = 813
Score = 128 bits (322), Expect = 4e-30
Identities = 82/185 (44%), Positives = 111/185 (59%), Gaps = 12/185 (6%)
Frame = +2
Query: 225 LKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKK 284
L EF+ SFP+ + PEP R VL+AEP + +RVL ND+FIIFASDGLW+ L+N++
Sbjct: 29 LXXPEFSXDPSFPRFHL-PEPIRRPVLTAEPSICSRVLKPNDKFIIFASDGLWEHLTNQE 205
Query: 285 AAEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVV 344
AAEIV NPR GIA+RLL AL AA++R++ Y+ +Q G RR FHDDI+V+VV
Sbjct: 206 AAEIVHNNPRIGIARRLLKAALNEAARKREMRYKDLQKIGKG----IRRFFHDDITVVVV 373
Query: 345 FLD-KTSFPRQPVLNLSYTGSSDRPVQSDF--------AQFGLTTSRLDSMRH---RSLK 392
F+D + V +LS G D S+F +Q ++LD + H R LK
Sbjct: 374 FIDHELRGKNVTVPDLSIKGFIDTVGPSNFRNLRGLE*SQGSFVANKLDWLLHWSKRKLK 553
Query: 393 DIIQF 397
+I F
Sbjct: 554 EIQYF 568
>BE190873 weakly similar to GP|21536936|gb| protein phosphatase 2C-like
{Arabidopsis thaliana}, partial (24%)
Length = 427
Score = 117 bits (293), Expect = 1e-26
Identities = 61/143 (42%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +2
Query: 69 LGIYDGHGGTQASRFICEHLFKNLLRFANDNENDITEATLRNAVSATEEGFLDFAKMNYM 128
+G+YDGHGG +ASRF+ HLF++L+R A D N I+E LR A SATE+GF+ +YM
Sbjct: 2 VGVYDGHGGPEASRFVRHHLFQHLMRIAQDYGN-ISEEILRRAGSATEDGFMKLVHRSYM 178
Query: 129 HQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTMV-NKKIRAEQLTRDHNCNDEAIR 187
+P + + SCC+ G+IWK TL++ NLGDSR V G++ + KI L+ +H+ E I
Sbjct: 179 IKPLIASIASCCMVGVIWKGTLYIGNLGDSRAVAGSICRSNKIIVVHLSPEHSACWEDIL 358
Query: 188 EELRAMHPDDPNVVINDNGSWRV 210
+H + ++V + G RV
Sbjct: 359 HYSACVHLRNTHIVEMNRGPCRV 427
>TC229438 similar to UP|Q9ZSQ7 (Q9ZSQ7) Protein phosphatase 2C homolog,
partial (42%)
Length = 832
Score = 108 bits (271), Expect(2) = 3e-26
Identities = 60/128 (46%), Positives = 79/128 (60%)
Frame = +3
Query: 226 KRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKA 285
KR T + K V E F R +LS++P + L +DQF+IFASDGLW+ LSN+ A
Sbjct: 282 KRLNSTREPLYAKFR-VREGFKRPILSSDPSISVHELQQHDQFLIFASDGLWEHLSNQDA 458
Query: 286 AEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGRNNVSRRSFHDDISVIVVF 345
+IVQ NP NGIA+RL+ AL AAK+R++ Y ++ G RR FHDDI+V+VVF
Sbjct: 459 VDIVQNNPHNGIARRLIKAALQEAAKKREMRYSDLKKIDRG----VRRHFHDDITVVVVF 626
Query: 346 LDKTSFPR 353
LD R
Sbjct: 627 LDSNLVSR 650
Score = 27.7 bits (60), Expect(2) = 3e-26
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 198 PNVVINDNGSWRVKGFITV---SRAIGDAYLKRSEF 230
PN+ +N + ++ I V SR+IGD YLK++EF
Sbjct: 188 PNITLNLSCIIQLSNEIFVWQISRSIGDVYLKKAEF 295
>TC205675 similar to GB|AAL87371.1|19548015|AY081718 AT4g33920/F17I5_110
{Arabidopsis thaliana;} , partial (36%)
Length = 889
Score = 112 bits (279), Expect = 4e-25
Identities = 64/132 (48%), Positives = 86/132 (64%)
Frame = +2
Query: 216 VSRAIGDAYLKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDG 275
VSR+IGD YLK+ +F F + P P R V++AEP + R L D F+IFASDG
Sbjct: 110 VSRSIGDVYLKKPDFYRDPVFQQFGN-PIPLKRPVMTAEPSIIIRELESQDLFLIFASDG 286
Query: 276 LWDFLSNKKAAEIVQKNPRNGIAKRLLSTALAVAAKRRKVTYRKIQAAATGRNNVSRRSF 335
LW+ LS++ A +IV K+PR GIAKRL+ AL AAK+R++ Y I+ G RR F
Sbjct: 287 LWEQLSDEAAVQIVFKHPRAGIAKRLVRAALHEAAKKREMRYDDIKKIDKG----IRRHF 454
Query: 336 HDDISVIVVFLD 347
HDDI+V+V++LD
Sbjct: 455 HDDITVVVIYLD 490
>BE555340 similar to GP|20340237|gb protein phosphatase 2c-like protein
{Thellungiella halophila}, partial (32%)
Length = 374
Score = 109 bits (273), Expect = 2e-24
Identities = 53/114 (46%), Positives = 74/114 (64%), Gaps = 7/114 (6%)
Frame = +2
Query: 37 HCYGEFSSAVVQANTTMEDQSQIEVASNNAV-------FLGIYDGHGGTQASRFICEHLF 89
H +GE+S AVVQAN +EDQSQIE + + F+G+YDGHGG + SR++C+HLF
Sbjct: 35 HLFGEYSMAVVQANNLLEDQSQIESGPLSLLDTGPYGTFVGVYDGHGGPETSRYVCDHLF 214
Query: 90 KNLLRFANDNENDITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAG 143
++L RFA++ + ++E +R A ATEEGFL + P + VGSCCL G
Sbjct: 215 QHLKRFASE-QKSMSEEVIRKAYQATEEGFLSVVTKQWPMNPQIAAVGSCCLVG 373
>TC227269 similar to UP|Q8VZD9 (Q8VZD9) AT5g53140/MFH8_8, partial (70%)
Length = 1398
Score = 103 bits (257), Expect = 2e-22
Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 6/260 (2%)
Frame = +2
Query: 52 TMEDQSQIE---VASNNAVFLGIYDGHGGTQASRFICEHLFKNLL---RFANDNENDITE 105
TMED I+ + + GI+DGHGG++A+ ++ EHLF NLL +F D + I+E
Sbjct: 362 TMEDFYDIKTLKIGGQSICLFGIFDGHGGSRAAEYLKEHLFDNLLKHPKFLTDAKLAISE 541
Query: 106 ATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTM 165
T+ FLD K + GS ++ L+VAN+GDSR T+
Sbjct: 542 -----TYQQTDANFLDSEKDTFRDD------GSTASTAVLVDNHLYVANVGDSR----TI 676
Query: 166 VNKKIRAEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGSWRVKGFITVSRAIGDAYL 225
++K +A L+ DH N R+ + ++ V+ G+WRV G + +SRA G+ L
Sbjct: 677 ISKAGKANALSEDHKPNRSDERKRI-----ENAGGVVMWAGTWRVGGVLAMSRAFGNRML 841
Query: 226 KRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKA 285
K+ + AEPE+ + + + + II ASDGLWD + N A
Sbjct: 842 KQ----------------------FVVAEPEIQDQEIDEQIELIILASDGLWDVVQNDDA 955
Query: 286 AEIVQKNPRNGIAKRLLSTA 305
+ + A R L+ A
Sbjct: 956 VSLARTEEEPEAAARKLTEA 1015
>BE473422 similar to GP|13937198|gb| AT4g33920/F17I5_110 {Arabidopsis
thaliana}, partial (24%)
Length = 395
Score = 102 bits (254), Expect = 3e-22
Identities = 52/116 (44%), Positives = 78/116 (66%)
Frame = +2
Query: 24 DEDPLGRSINLQSHCYGEFSSAVVQANTTMEDQSQIEVASNNAVFLGIYDGHGGTQASRF 83
++D L +L+ H G +S AVVQAN+++EDQ+Q+ S +A F+G+YDGHGG +ASRF
Sbjct: 53 NDDDLLWHTDLKPHASGNYSIAVVQANSSLEDQAQV-FTSPSATFVGVYDGHGGPEASRF 229
Query: 84 ICEHLFKNLLRFANDNENDITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSC 139
I HLF L +FA + E D++E ++ A ATEE FL + +++ +P + VGSC
Sbjct: 230 ITNHLFSFLRKFATE-EGDLSEEVIKKAFEATEEEFLRVVRESWIARPQIASVGSC 394
>CF808601
Length = 564
Score = 100 bits (250), Expect = 1e-21
Identities = 46/106 (43%), Positives = 69/106 (64%)
Frame = +1
Query: 40 GEFSSAVVQANTTMEDQSQIEVASNNAVFLGIYDGHGGTQASRFICEHLFKNLLRFANDN 99
G+FS AVVQAN +EDQSQIE + F+GIYDGHGG ASR++C+HLF++ + ++
Sbjct: 250 GDFSMAVVQANQVLEDQSQIE-SGPLGTFVGIYDGHGGPDASRYVCDHLFRHFQAISAES 426
Query: 100 ENDITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGII 145
+T T+ A TEEG++ ++ +P++ G+CCL G+I
Sbjct: 427 RGVVTTETIERAFRQTEEGYMALVSGSWNARPHIASAGTCCLVGVI 564
>TC226051 similar to UP|O24078 (O24078) Protein phosphatase 2C, partial (86%)
Length = 1450
Score = 96.7 bits (239), Expect = 2e-20
Identities = 73/223 (32%), Positives = 107/223 (47%)
Frame = +2
Query: 68 FLGIYDGHGGTQASRFICEHLFKNLLRFANDNENDITEATLRNAVSATEEGFLDFAKMNY 127
F GI+DGHGG +A+ F +L KN+L + D E ++ T+ DF K +
Sbjct: 356 FFGIFDGHGGAKAAEFAASNLEKNVLDEVIVRDEDNVEEAVKRGYLNTDS---DFLKEDL 526
Query: 128 MHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTMVNKKIRAEQLTRDHNCNDEAIR 187
+ GSCC+ +I L V+N GD R VI ++ AE LT DH + E R
Sbjct: 527 -------HGGSCCVTALIRNGNLIVSNAGDCRAVI----SRGGVAEALTSDHRPSREDER 673
Query: 188 EELRAMHPDDPNVVINDNGSWRVKGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEPFT 247
+ + ++ V G WR++G + VSR IGD +LK+ + EP T
Sbjct: 674 DRIESL----GGYVDLCRGVWRIQGSLAVSRGIGDRHLKQ------------WVTAEPET 805
Query: 248 RGVLSAEPEMHTRVLTDNDQFIIFASDGLWDFLSNKKAAEIVQ 290
+ VL EPE +I ASDGLWD + N++A +I +
Sbjct: 806 K-VLRIEPE---------HDLLILASDGLWDKVGNQEAVDIAR 904
>TC224671 similar to UP|Q8S8Z0 (Q8S8Z0) Protein phosphatase 2C, partial (87%)
Length = 1803
Score = 93.6 bits (231), Expect = 2e-19
Identities = 81/276 (29%), Positives = 134/276 (48%), Gaps = 10/276 (3%)
Frame = +3
Query: 40 GEFSSAVVQA---NTTMED--QSQIEVASNNAVFL-GIYDGHGGTQASRFICEHLFKNLL 93
G+FS + ++MED +++I+ V L G++DGHGG +A+ ++ ++LF NL+
Sbjct: 582 GKFSYGYASSPGKRSSMEDFYETKIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLI 761
Query: 94 ---RFANDNENDITEATLRNAVSATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKETL 150
+F +D T++ + +A + T+ FL N ++ GS I+ + L
Sbjct: 762 SHPKFISD-----TKSAIADAYNHTDSEFLK--SENNQNRD----AGSTASTAILVGDRL 908
Query: 151 HVANLGDSRVVIGTMVNKKIRAEQLTRDHNCNDEAIREELRAMHPDDPNVVINDNGSWRV 210
VAN+GDSR VI N A ++RDH + R + +D + G+WRV
Sbjct: 909 LVANVGDSRAVICRGGN----AIAVSRDHKPDQTDERRRI-----EDAGGFVMWAGTWRV 1061
Query: 211 KGFITVSRAIGDAYLKRSEFTLRESFPKLEIVPEPFTRGVLSAEPEMHTRVLTDNDQFII 270
G + VSRA GD LK+ + A+PE+ + + +F+I
Sbjct: 1062GGVLAVSRAFGDRLLKQ----------------------YVVADPEIQEEKVDSSLEFLI 1175
Query: 271 FASDGLWDFLSNKKAAEIVQK-NPRNGIAKRLLSTA 305
ASDGLWD +SN++A +++ AKRL+ A
Sbjct: 1176LASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMQEA 1283
>BE475454
Length = 424
Score = 93.6 bits (231), Expect = 2e-19
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Frame = +2
Query: 53 MEDQSQIEVASNNAVFLGIYDGHGGTQASRFICEHLFKNLLRFANDNENDITEATLRNAV 112
+EDQSQIE + F+GIYDGHGG ASR++C HLF++ + ++ +T T+ A
Sbjct: 8 LEDQSQIE-SGPLGTFVGIYDGHGGPNASRYVCNHLFRHFQAISTESHRVVTPKTIERAF 184
Query: 113 SATEEGFLDFAKMNYMHQPNLGYVGSCCLAGIIWKETLHVANLGDSRVVIGTMVN--KKI 170
TEEG+ + QP + + L +I++ TL + N GDS VV+G ++ + I
Sbjct: 185 RQTEEGYTSLVSSS*NAQPQIISTKTYYLVKVIFQHTLFMTNTGDSHVVLGKKISNTRDI 364
Query: 171 RAEQLTRDHNCNDEAIREEL 190
L+ +H+ + E +R +L
Sbjct: 365 TTIHLSAEHSADLETVRRKL 424
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,431,599
Number of Sequences: 63676
Number of extensions: 190322
Number of successful extensions: 1213
Number of sequences better than 10.0: 133
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of query: 432
length of database: 12,639,632
effective HSP length: 100
effective length of query: 332
effective length of database: 6,272,032
effective search space: 2082314624
effective search space used: 2082314624
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC142396.3