BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142394.6 - phase: 0
(513 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF426193 similar to GP|12328578|dbj P0426D06.17 {Oryza sativa (j... 182 2e-46
TC229098 similar to PIR|T46032|T46032 WD-40 repeat regulatory pr... 100 2e-21
TC207353 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat prot... 96 5e-20
TC207354 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat prot... 92 7e-19
TC208265 similar to UP|Q6S7B0 (Q6S7B0) TAF5, partial (36%) 88 1e-17
TC220739 weakly similar to UP|PRP4_HUMAN (O43172) U4/U6 small nu... 82 4e-16
TC205059 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-... 81 1e-15
TC204561 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-... 81 1e-15
TC222379 homologue to UP|Q9HGV7 (Q9HGV7) Gbeta like protein, par... 79 6e-15
TC229097 similar to PIR|T46032|T46032 WD-40 repeat regulatory pr... 78 1e-14
TC208379 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana geno... 74 1e-13
TC228794 similar to UP|Q6V8V0 (Q6V8V0) Transducin-like (Fragment... 72 5e-13
TC206060 weakly similar to UP|Q9FNN2 (Q9FNN2) WD-repeat protein-... 72 6e-13
TC216518 weakly similar to UP|Q9LW87 (Q9LW87) Coatomer protein c... 72 8e-13
TC230628 homologue to UP|Q9XIJ3 (Q9XIJ3) T10O24.21, partial (41%) 71 1e-12
TC220018 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana geno... 71 1e-12
TC209542 71 1e-12
TC228105 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {A... 69 7e-12
TC222867 similar to UP|Q8L830 (Q8L830) WD40-repeat protein (Frag... 69 7e-12
TC211342 similar to UP|Q9LVF2 (Q9LVF2) Arabidopsis thaliana geno... 67 2e-11
>BF426193 similar to GP|12328578|dbj P0426D06.17 {Oryza sativa (japonica
cultivar-group)}, partial (18%)
Length = 295
Score = 182 bits (463), Expect = 2e-46
Identities = 85/98 (86%), Positives = 92/98 (93%)
Frame = +2
Query: 412 HIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSY 471
HI NKTSSIYIMTL+GQVVKSFSSGKREGGDFVAAC+SPKGEWIYCVGEDRNMYCFSY
Sbjct: 2 HIGYRNKTSSIYIMTLRGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNMYCFSY 181
Query: 472 QSGKLEHLMTVHDKEIIGVTHHPHRNLVATFSDDHTMK 509
QSGKL+HL+ VH+KE +GVTHHPHRNLVATFS+D TMK
Sbjct: 182 QSGKLDHLIKVHEKEGVGVTHHPHRNLVATFSEDCTMK 295
>TC229098 similar to PIR|T46032|T46032 WD-40 repeat regulatory protein tup1
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (59%)
Length = 580
Score = 100 bits (248), Expect = 2e-21
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Frame = +3
Query: 212 GAKSHAECARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVD 271
G ++ C F+P +VS S D + VWD SGK K L H +PV VD
Sbjct: 48 GHTNYVFCVNFNPQSNIIVSGSFDETVRVWDVKSGKCLKVLP--------AHSDPVTAVD 203
Query: 272 FSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTA 331
F+RD +I S S DG ++W T C++ L + V+ V FS + +L + D+T
Sbjct: 204 FNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDDNPPVSFVKFSPNAKFILVGTLDNTL 383
Query: 332 RIHGLKSGKMLKEFRGH--TSYVNDATF-TNDGTRVITASSDCTVKVWDLKTTDCLQ 385
R+ +GK LK + GH + Y +TF T +G ++ S + + +WDL++ +Q
Sbjct: 384 RLWNYSTGKFLKTYTGHVNSKYCISSTFSTTNGKYIVGGSEENYIYLWDLQSRKIVQ 554
Score = 84.0 bits (206), Expect = 2e-16
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Frame = +3
Query: 240 VWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCL 299
+WD +G L K L H V CV+F+ S +I SGS D ++VW +++ +CL
Sbjct: 6 LWDVPTGSLIKTLHG--------HTNYVFCVNFNPQSNIIVSGSFDETVRVWDVKSGKCL 161
Query: 300 RRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKE-FRGHTSYVNDATFT 358
+ L AHS VT+V F+RDGS ++S+S+D RI +G +K V+ F+
Sbjct: 162 KVLP-AHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDDNPPVSFVKFS 338
Query: 359 NDGTRVITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVFIFPK-----NTEHI 413
+ ++ + D T+++W+ T L+T+ VNS + N ++I
Sbjct: 339 PNAKFILVGTLDNTLRLWNYSTGKFLKTY---------TGHVNSKYCISSTFSTTNGKYI 491
Query: 414 VVCNKTSSIYIMTLQGQVV 432
V ++ + IY+ LQ + +
Sbjct: 492 VGGSEENYIYLWDLQSRKI 548
Score = 76.3 bits (186), Expect = 3e-14
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Frame = +3
Query: 289 KVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGH 348
++W + T ++ L H H+ V V+F+ + ++S SFD T R+ +KSGK LK H
Sbjct: 3 RLWDVPTGSLIKTL-HGHTNYVFCVNFNPQSNIIVSGSFDETVRVWDVKSGKCLKVLPAH 179
Query: 349 TSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQTF--KPPPPLRGGDASVNSVFIF 406
+ V F DG+ ++++S D ++WD T C++T PP+ S N+ FI
Sbjct: 180 SDPVTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDDNPPVSFVKFSPNAKFIL 359
Query: 407 PKNTEHIV-VCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACIS-----PKGEWIYCV 460
++ + + N ++ ++ T G V + CIS G++I
Sbjct: 360 VGTLDNTLRLWNYSTGKFLKTYTGHVNSKY-------------CISSTFSTTNGKYIVGG 500
Query: 461 GEDRNMYCFSYQSGKLEHLMTVH 483
E+ +Y + QS K+ + H
Sbjct: 501 SEENYIYLWDLQSRKIVQKLEGH 569
>TC207353 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat protein 5,
partial (58%)
Length = 898
Score = 95.5 bits (236), Expect = 5e-20
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Frame = +3
Query: 219 CARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEM 278
C F+P Y+VS S D I+VWD +GK T H PV V ++RD +
Sbjct: 9 CVNFNPQSSYIVSGSFDETIKVWDVKTGK--------CVHTIKGHTMPVTSVHYNRDGTL 164
Query: 279 IASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKS 338
I S S DG K+W T L+ L + V+ FS +G +L+ + + T ++ S
Sbjct: 165 IISASHDGSCKIWDTGTGNLLKTLIEDKAPAVSFAKFSPNGKFILAATLNDTLKLWNYGS 344
Query: 339 GKMLKEFRGHTSYVNDATFT---NDGTRVITASSDCTVKVWDLKTTDCLQ 385
GK LK + GH + V T T +G +++ S D V +WDL+ + +Q
Sbjct: 345 GKFLKIYSGHVNRVYCITSTFSVTNGRYIVSGSEDRCVYIWDLQAKNMIQ 494
Score = 84.7 bits (208), Expect = 9e-17
Identities = 63/248 (25%), Positives = 110/248 (43%), Gaps = 3/248 (1%)
Frame = +3
Query: 267 VLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTS 326
V CV+F+ S I SGS D IKVW ++T +C+ ++ H+ VTSV ++RDG+ ++S S
Sbjct: 3 VFCVNFNPQSSYIVSGSFDETIKVWDVKTGKCVHTIK-GHTMPVTSVHYNRDGTLIISAS 179
Query: 327 FDSTARIHGLKSGKMLKE-FRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQ 385
D + +I +G +LK V+ A F+ +G ++ A+ + T+K+W+ + L+
Sbjct: 180 HDGSCKIWDTGTGNLLKTLIEDKAPAVSFAKFSPNGKFILAATLNDTLKLWNYGSGKFLK 359
Query: 386 TFKPPPPLRGGDASVNSVFIFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDF 445
+ VN V+ + +FS
Sbjct: 360 IY---------SGHVNRVYC-------------------------ITSTFS--------- 410
Query: 446 VAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLMTVHDKEIIGVTHHPHRNLVAT--FS 503
G +I EDR +Y + Q+ + + H +I VT HP N +A+ +
Sbjct: 411 -----VTNGRYIVSGSEDRCVYIWDLQAKNMIQKLEGHTDTVISVTCHPTENKIASAGLA 575
Query: 504 DDHTMKLW 511
D T+++W
Sbjct: 576 GDRTVRVW 599
>TC207354 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat protein 5,
partial (57%)
Length = 1124
Score = 91.7 bits (226), Expect = 7e-19
Identities = 51/168 (30%), Positives = 83/168 (49%)
Frame = +1
Query: 219 CARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEM 278
C +FS DG L S S+D + +W + L L + H E + + +S DS
Sbjct: 151 CVKFSNDGTLLASASLDKTLIIWSSATLTLCHRL--------VGHSEGISDLAWSSDSHY 306
Query: 279 IASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKS 338
I S S D +++W ++ H V V+F+ S ++S SFD T ++ +K+
Sbjct: 307 ICSASDDRTLRIWDATVGGGCIKILRGHDDAVFCVNFNPQSSYIVSGSFDETIKVWDVKT 486
Query: 339 GKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQT 386
GK + +GHT V + DG +I+AS D + K+WD +T + L+T
Sbjct: 487 GKCVHTIKGHTMPVTSVHYNRDGNLIISASHDGSCKIWDTETGNLLKT 630
Score = 53.1 bits (126), Expect = 3e-07
Identities = 48/207 (23%), Positives = 81/207 (38%), Gaps = 1/207 (0%)
Frame = +1
Query: 306 HSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVI 365
H V+ V FS DG+ L S S D T I + + GH+ ++D +++D +
Sbjct: 133 HENAVSCVKFSNDGTLLASASLDKTLIIWSSATLTLCHRLVGHSEGISDLAWSSDSHYIC 312
Query: 366 TASSDCTVKVWDLKT-TDCLQTFKPPPPLRGGDASVNSVFIFPKNTEHIVVCNKTSSIYI 424
+AS D T+++WD C++ LRG D +V V P+ S YI
Sbjct: 313 SASDDRTLRIWDATVGGGCIKI------LRGHDDAVFCVNFNPQ------------SSYI 438
Query: 425 MTLQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLMTVHD 484
++ G F D + + ++GK H + H
Sbjct: 439 VS----------------GSF-----------------DETIKVWDVKTGKCVHTIKGHT 519
Query: 485 KEIIGVTHHPHRNLVATFSDDHTMKLW 511
+ V ++ NL+ + S D + K+W
Sbjct: 520 MPVTSVHYNRDGNLIISASHDGSCKIW 600
Score = 35.4 bits (80), Expect = 0.062
Identities = 15/50 (30%), Positives = 36/50 (72%)
Frame = +1
Query: 220 ARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLC 269
A+FSP+G+ +++ +++ +++W+Y SG++ K+L + A E ++H+ + C
Sbjct: 664 AKFSPNGKLILAATLNDTLKLWNYGSGEVFKNL-FWACE*SILHNFHIFC 810
>TC208265 similar to UP|Q6S7B0 (Q6S7B0) TAF5, partial (36%)
Length = 1048
Score = 87.8 bits (216), Expect = 1e-17
Identities = 50/161 (31%), Positives = 81/161 (50%)
Frame = +2
Query: 221 RFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIA 280
+FSP G Y S S D +W + Q H V CV + + IA
Sbjct: 134 QFSPVGHYFASSSHDRTARIWSMD--------RIQPLRIMAGHLSDVDCVQWHANCNYIA 289
Query: 281 SGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGK 340
+GS+D +++W +++ +C+R H + S++ S DG + S D T + L SG+
Sbjct: 290 TGSSDKTVRLWDVQSGECVRVFV-GHRGMILSLAMSPDGRYMASGDEDGTIMMWDLSSGR 466
Query: 341 MLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTT 381
L GHTS V F+++G+ + + S+DCTVK+WD+ T+
Sbjct: 467 CLTPLIGHTSCVWSLAFSSEGSVIASGSADCTVKLWDVNTS 589
Score = 74.3 bits (181), Expect = 1e-13
Identities = 49/165 (29%), Positives = 78/165 (46%)
Frame = +2
Query: 220 ARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMI 279
A FSP G +++S S D I +W S KL +L + H+ PV V FS
Sbjct: 5 ASFSPVGDFILSSSADSTIRLW---STKLNANLV-----CYKGHNYPVWDVQFSPVGHYF 160
Query: 280 ASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSG 339
AS S D ++W + Q LR + H V V + + + + + S D T R+ ++SG
Sbjct: 161 ASSSHDRTARIWSMDRIQPLRIMA-GHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSG 337
Query: 340 KMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCL 384
+ ++ F GH + + DG + + D T+ +WDL + CL
Sbjct: 338 ECVRVFVGHRGMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCL 472
Score = 58.9 bits (141), Expect = 5e-09
Identities = 37/116 (31%), Positives = 59/116 (49%)
Frame = +2
Query: 272 FSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTA 331
FS + I S S D I++W + L + H+ V V FS G S+S D TA
Sbjct: 11 FSPVGDFILSSSADSTIRLWSTKLNANLVCYK-GHNYPVWDVQFSPVGHYFASSSHDRTA 187
Query: 332 RIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQTF 387
RI + + L+ GH S V+ + + + T SSD TV++WD+++ +C++ F
Sbjct: 188 RIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRVF 355
Score = 50.8 bits (120), Expect = 1e-06
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +2
Query: 223 SPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIASG 282
SPDG+Y+ S DG I +WD SG+ L + H V + FS + +IASG
Sbjct: 392 SPDGRYMASGDEDGTIMMWDLSSGRCLTPL--------IGHTSCVWSLAFSSEGSVIASG 547
Query: 283 STDGKIKVWRIRTAQCLRRLE 303
S D +K+W + T+ + R E
Sbjct: 548 SADCTVKLWDVNTSTKVSRAE 610
>TC220739 weakly similar to UP|PRP4_HUMAN (O43172) U4/U6 small nuclear
ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDa protein) (WD
splicing factor Prp4) (hPrp4), partial (34%)
Length = 1206
Score = 82.4 bits (202), Expect = 4e-16
Identities = 48/162 (29%), Positives = 77/162 (46%), Gaps = 1/162 (0%)
Frame = +1
Query: 222 FSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIAS 281
F DG SC +D VWD +G+ L+ H +PVL + FS + +A+
Sbjct: 469 FHNDGSLAASCGLDSLARVWDLRTGRSILALEG--------HVKPVLGISFSPNGYHLAT 624
Query: 282 GSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFS-RDGSQLLSTSFDSTARIHGLKSGK 340
G D ++W +R + + AHS ++ V F +G L++ S+D TA++ + K
Sbjct: 625 GGEDNTCRIWDLRKKKSFYTIP-AHSNLISQVKFEPHEGYFLVTASYDMTAKVWSGRDFK 801
Query: 341 MLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTD 382
+K GH + V DG ++T S D T+K+W TD
Sbjct: 802 PVKTLSGHEAKVTSVDVLGDGGSIVTVSHDRTIKLWSSNPTD 927
Score = 79.3 bits (194), Expect = 4e-15
Identities = 74/294 (25%), Positives = 115/294 (38%), Gaps = 4/294 (1%)
Frame = +1
Query: 222 FSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIAS 281
FS DG++L +CS+ G ++W K+KK F H E V +S + +A+
Sbjct: 97 FSRDGKWLATCSLTGASKLWSM--PKIKK------HSIFKGHTERATDVAYSPVHDHLAT 252
Query: 282 GSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKM 341
S D K W L+ E H + ++F G L + SFD T R+ +++G
Sbjct: 253 ASADRTAKYWN--QGSLLKTFE-GHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGDE 423
Query: 342 LKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQTFK-PPPPLRGGDASV 400
L GH+ V F NDG+ + D +VWDL+T + + P+ G S
Sbjct: 424 LLLQEGHSRSVYGLAFHNDGSLAASCGLDSLARVWDLRTGRSILALEGHVKPVLGISFSP 603
Query: 401 NSVFIF---PKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACISPKGEWI 457
N + NT I K S Y + ++ EG V A
Sbjct: 604 NGYHLATGGEDNTCRIWDLRKKKSFYTIPAHSNLISQVKFEPHEGYFLVTA--------- 756
Query: 458 YCVGEDRNMYCFSYQSGKLEHLMTVHDKEIIGVTHHPHRNLVATFSDDHTMKLW 511
D +S + K ++ H+ ++ V + T S D T+KLW
Sbjct: 757 ---SYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLGDGGSIVTVSHDRTIKLW 909
Score = 74.3 bits (181), Expect = 1e-13
Identities = 50/178 (28%), Positives = 80/178 (44%)
Frame = +1
Query: 202 PTNLSHTIKFGAKSHAECARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFM 261
P H+I G A +SP +L + S D + W+ G L K TF
Sbjct: 163 PKIKKHSIFKGHTERATDVAYSPVHDHLATASADRTAKYWN--QGSLLK--------TFE 312
Query: 262 MHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQ 321
H + + + F + + + S D ++W I T L L+ HS+ V ++F DGS
Sbjct: 313 GHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGDELL-LQEGHSRSVYGLAFHNDGSL 489
Query: 322 LLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLK 379
S DS AR+ L++G+ + GH V +F+ +G + T D T ++WDL+
Sbjct: 490 AASCGLDSLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLR 663
Score = 67.0 bits (162), Expect = 2e-11
Identities = 63/249 (25%), Positives = 100/249 (39%), Gaps = 1/249 (0%)
Frame = +1
Query: 264 DEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLL 323
D P+ FSRD + +A+ S G K+W + + + H++ T V++S L
Sbjct: 73 DRPLSGCSFSRDGKWLATCSLTGASKLWSMPKIK-KHSIFKGHTERATDVAYSPVHDHLA 249
Query: 324 STSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDC 383
+ S D TA+ G +LK F GH + F G + TAS D T ++WD++T D
Sbjct: 250 TASADRTAKY--WNQGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGDE 423
Query: 384 LQTFKPPPPLRGGDASVNSVFIFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGG 443
L L+ G + F + C S + L + +S + +
Sbjct: 424 LL-------LQEGHSRSVYGLAFHNDGSLAASCGLDSLARVWDL--RTGRSILALEGHVK 576
Query: 444 DFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLMTVHDKEIIGVTHHPHRN-LVATF 502
+ SP G + GED + + K + + H I V PH + T
Sbjct: 577 PVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSFYTIPAHSNLISQVKFEPHEGYFLVTA 756
Query: 503 SDDHTMKLW 511
S D T K+W
Sbjct: 757 SYDMTAKVW 783
>TC205059 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1492
Score = 81.3 bits (199), Expect = 1e-15
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Frame = +2
Query: 223 SPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIASG 282
S DGQ+ +S S DG + +WD +G + F+ H + VL V FS D+ I S
Sbjct: 434 SSDGQFALSGSWDGELRLWDLAAG--------TSARRFVGHTKDVLSVAFSIDNRQIVSA 589
Query: 283 STDGKIKVWRIRTAQCLRRLE--HAHSQGVTSVSFSRDGSQ--LLSTSFDSTARIHGLKS 338
S D IK+W +C ++ AHS V+ V FS Q ++S S+D T ++ L +
Sbjct: 590 SRDRTIKLWN-TLGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTN 766
Query: 339 GKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDL 378
K+ GH YVN + DG+ + D + +WDL
Sbjct: 767 CKLRNTLAGHNGYVNTVAVSPDGSLCASGGKDGVILLWDL 886
Score = 65.5 bits (158), Expect = 6e-11
Identities = 68/263 (25%), Positives = 114/263 (42%), Gaps = 10/263 (3%)
Frame = +2
Query: 259 TFMMHDEPVLCVDFSRD-SEMIASGSTDGKIKVWRI----RTAQCLRRLEHAHSQGVTSV 313
T H + V + D S+MI + S D I +W + +T RR HS V V
Sbjct: 248 TMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDV 427
Query: 314 SFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTV 373
S DG LS S+D R+ L +G + F GHT V F+ D ++++AS D T+
Sbjct: 428 VLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTI 607
Query: 374 KVWDLKTTDCLQTFKPPPPLRGGDAS---VNSVFIFPKNTE-HIVVCNKTSSIYIMTLQG 429
K+W+ +C T ++ GDA V+ V P + IV + ++ + L
Sbjct: 608 KLWN-TLGECKYT------IQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTN 766
Query: 430 QVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLMTVHDKEII- 488
+++ +G G +SP G G+D + + GK L ++ II
Sbjct: 767 CKLRNTLAG--HNGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGSIIH 934
Query: 489 GVTHHPHRNLVATFSDDHTMKLW 511
+ P+R + + + ++K+W
Sbjct: 935 ALCFSPNRYWLCA-ATEQSIKIW 1000
Score = 31.2 bits (69), Expect = 1.2
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = +2
Query: 212 GAKSHAECARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVD 271
G + SPDG S DG I +WD GK Y + ++H LC
Sbjct: 791 GHNGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK----RLYSLDAGSIIH---ALC-- 943
Query: 272 FSRDSEMIASGSTDGKIKVWRIRTAQCLRRLE 303
FS + + + +T+ IK+W + + + L+
Sbjct: 944 FSPNRYWLCA-ATEQSIKIWDLESKSIVEDLK 1036
>TC204561 homologue to UP|GBLP_SOYBN (Q39836) Guanine nucleotide-binding
protein beta subunit-like protein, complete
Length = 1419
Score = 81.3 bits (199), Expect = 1e-15
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Frame = +1
Query: 223 SPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIASG 282
S DGQ+ +S S DG + +WD +G + F+ H + VL V FS D+ I S
Sbjct: 358 SSDGQFALSGSWDGELRLWDLAAG--------TSARRFVGHTKDVLSVAFSIDNRQIVSA 513
Query: 283 STDGKIKVWRIRTAQCLRRLE--HAHSQGVTSVSFSRDGSQ--LLSTSFDSTARIHGLKS 338
S D IK+W +C ++ AHS V+ V FS Q ++S S+D T ++ L +
Sbjct: 514 SRDRTIKLWN-TLGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTN 690
Query: 339 GKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDL 378
K+ GH YVN + DG+ + D + +WDL
Sbjct: 691 CKLRNTLAGHNGYVNTVAVSPDGSLCASGGKDGVILLWDL 810
Score = 65.5 bits (158), Expect = 6e-11
Identities = 68/263 (25%), Positives = 114/263 (42%), Gaps = 10/263 (3%)
Frame = +1
Query: 259 TFMMHDEPVLCVDFSRD-SEMIASGSTDGKIKVWRI----RTAQCLRRLEHAHSQGVTSV 313
T H + V + D S+MI + S D I +W + +T RR HS V V
Sbjct: 172 TMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDV 351
Query: 314 SFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTV 373
S DG LS S+D R+ L +G + F GHT V F+ D ++++AS D T+
Sbjct: 352 VLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTI 531
Query: 374 KVWDLKTTDCLQTFKPPPPLRGGDAS---VNSVFIFPKNTE-HIVVCNKTSSIYIMTLQG 429
K+W+ +C T ++ GDA V+ V P + IV + ++ + L
Sbjct: 532 KLWN-TLGECKYT------IQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTN 690
Query: 430 QVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLMTVHDKEII- 488
+++ +G G +SP G G+D + + GK L ++ II
Sbjct: 691 CKLRNTLAG--HNGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGSIIH 858
Query: 489 GVTHHPHRNLVATFSDDHTMKLW 511
+ P+R + + + ++K+W
Sbjct: 859 ALCFSPNRYWLCA-ATEQSIKIW 924
Score = 43.1 bits (100), Expect = 3e-04
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Frame = +1
Query: 219 CARFSPDGQY--LVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDS 276
C RFSP +VS S D ++VW+ + KL+ T H+ V V S D
Sbjct: 604 CVRFSPSTLQPTIVSASWDRTVKVWNLTNCKLRN--------TLAGHNGYVNTVAVSPDG 759
Query: 277 EMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGL 336
+ ASG DG I +W + + L L+ + ++ FS + L + + + + +I L
Sbjct: 760 SLCASGGKDGVILLWDLAEGKRLYSLDAGSI--IHALCFSPNRYWLCAAT-EQSIKIWDL 930
Query: 337 KSGKMLKEFRGHTSYVNDAT------------------FTNDGTRVITASSDCTVKVW 376
+S ++++ + DAT ++ DG+ + + +D V+VW
Sbjct: 931 ESKSIVEDLKVDLKTEADATSGGGNANKKKVIYCTSLNWSADGSTLFSGYTDGVVRVW 1104
Score = 38.1 bits (87), Expect = 0.010
Identities = 29/97 (29%), Positives = 51/97 (51%), Gaps = 10/97 (10%)
Frame = +1
Query: 207 HTIKFGAKSHAECARFSPDGQYLVSCSIDGFIEVWDYISGK----LKKDLQYQAEETF-- 260
+++ G+ HA C FSP+ +Y + + + I++WD S LK DL+ +A+ T
Sbjct: 829 YSLDAGSIIHALC--FSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEADATSGG 999
Query: 261 --MMHDEPVLC--VDFSRDSEMIASGSTDGKIKVWRI 293
+ + C +++S D + SG TDG ++VW I
Sbjct: 1000GNANKKKVIYCTSLNWSADGSTLFSGYTDGVVRVWAI 1110
Score = 37.4 bits (85), Expect = 0.016
Identities = 36/139 (25%), Positives = 58/139 (40%), Gaps = 17/139 (12%)
Frame = +1
Query: 212 GAKSHAECARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVD 271
G + SPDG S DG I +WD GK Y + ++H LC
Sbjct: 715 GHNGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK----RLYSLDAGSIIH---ALC-- 867
Query: 272 FSRDSEMIASGSTDGKIKVWRIRTAQCLRRLE--------------HAHSQGV---TSVS 314
FS + + + +T+ IK+W + + + L+ +A+ + V TS++
Sbjct: 868 FSPNRYWLCA-ATEQSIKIWDLESKSIVEDLKVDLKTEADATSGGGNANKKKVIYCTSLN 1044
Query: 315 FSRDGSQLLSTSFDSTARI 333
+S DGS L S D R+
Sbjct: 1045WSADGSTLFSGYTDGVVRV 1101
>TC222379 homologue to UP|Q9HGV7 (Q9HGV7) Gbeta like protein, partial (84%)
Length = 950
Score = 78.6 bits (192), Expect = 6e-15
Identities = 47/158 (29%), Positives = 75/158 (46%), Gaps = 2/158 (1%)
Frame = +1
Query: 223 SPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIASG 282
S DG Y +S S D + +W+ +G Q F+ H+ VL V FS D+ I SG
Sbjct: 61 SSDGAYALSSSWDKTLRLWELSTG--------QTTRRFVGHNNDVLSVSFSADNRQIVSG 216
Query: 283 STDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQ--LLSTSFDSTARIHGLKSGK 340
S D IK+W + H++ V+ V FS + ++S +D ++ L + +
Sbjct: 217 SRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKFVKVWELATCR 396
Query: 341 MLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDL 378
+ + GHT Y+N T + DG+ + D T +WDL
Sbjct: 397 IQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDL 510
Score = 62.0 bits (149), Expect = 6e-10
Identities = 49/197 (24%), Positives = 83/197 (41%)
Frame = +1
Query: 300 RRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTN 359
+R H HS V+ S DG+ LS+S+D T R+ L +G+ + F GH + V +F+
Sbjct: 13 KRSLHGHSHIVSDCVISSDGAYALSSSWDKTLRLWELSTGQTTRRFVGHNNDVLSVSFSA 192
Query: 360 DGTRVITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVFIFPKNTEHIVVCNKT 419
D ++++ S D T+K+W+ DC T G S F N ++ V+ +
Sbjct: 193 DNRQIVSGSRDRTIKLWN-TLGDCKYTITDK-----GHTEWVSCVRFSPNPQNPVIVSAG 354
Query: 420 SSIYIMTLQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHL 479
++ + + + G ISP G G+D + K +
Sbjct: 355 WDKFVKVWELATCRIQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYS 534
Query: 480 MTVHDKEIIGVTHHPHR 496
+T D EI + P+R
Sbjct: 535 LTAGD-EIHALVFSPNR 582
>TC229097 similar to PIR|T46032|T46032 WD-40 repeat regulatory protein tup1
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (47%)
Length = 755
Score = 77.8 bits (190), Expect = 1e-14
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Frame = +1
Query: 265 EPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLS 324
+PV VDF+RD +I S S DG ++W T C++ L + V+ V FS + +L
Sbjct: 1 DPVTAVDFNRDGSLIVSSSYDGLCRIWDASTGHCMKTLIDDENPPVSFVKFSPNAKFILV 180
Query: 325 TSFDSTARIHGLKSGKMLKEFRGH--TSYVNDATFT-NDGTRVITASSDCTVKVWDLKTT 381
+ D+T R+ +GK LK + GH + Y +TF+ +G ++ S D + +WDL++
Sbjct: 181 GTLDNTLRLWNYSTGKFLKTYTGHVNSKYCISSTFSITNGKYIVGGSEDNCIYLWDLQSR 360
Query: 382 DCLQTFKPPPPLRGGDASVNSVFIFPKNTEHIV 414
+Q L G +V SV P TE+++
Sbjct: 361 KIVQ------KLEGHSDAVVSVSCHP--TENMI 435
Score = 46.6 bits (109), Expect = 3e-05
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Frame = +1
Query: 221 RFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFS---RDSE 277
+FSP+ ++++ ++D + +W+Y +GK K T+ H C+ + + +
Sbjct: 148 KFSPNAKFILVGTLDNTLRLWNYSTGKFLK--------TYTGHVNSKYCISSTFSITNGK 303
Query: 278 MIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSF--DSTARI 333
I GS D I +W +++ + +++LE HS V SVS + + S + D+T +I
Sbjct: 304 YIVGGSEDNCIYLWDLQSRKIVQKLE-GHSDAVVSVSCHPTENMIASGALGNDNTVKI 474
>TC208379 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K8K14 (AT5g67320/K8K14_4),
partial (42%)
Length = 1062
Score = 74.3 bits (181), Expect = 1e-13
Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 17/248 (6%)
Frame = +2
Query: 221 RFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIA 280
+++ G Y+++ S D VWD + + K+ ++ H L VD+ R++ A
Sbjct: 56 KWNKKGDYILTGSCDQTAIVWDVKAEEWKQQFEF--------HSGWTLDVDW-RNNVSFA 208
Query: 281 SGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGK 340
+ STD KI V +I +R H V + + GS L S S D TA+I +K K
Sbjct: 209 TSSTDTKIHVCKIGEKLPIRTFV-GHQSEVNCIKWDPTGSLLASCSDDMTAKIWSMKQDK 385
Query: 341 MLKEFRGHTSYVNDATF--TNDGTR-------VITASSDCTVKVWDLKTTDCLQTFKPPP 391
L EFR H+ + + T GT + +AS D TVK+WD++ L +
Sbjct: 386 YLHEFREHSKEIYTIRWSPTGPGTNNPNKNLVLASASFDSTVKLWDVELGKLLYS----- 550
Query: 392 PLRGGDASVNSVFIFPKNTEHIVVCNKTSSIYIMTL-QGQVVKSFSSGK-------REGG 443
L G V SV F N E+I + S+ I +L +G++VK+++ + G
Sbjct: 551 -LNGHRDRVYSV-AFSPNGEYIASGSPDRSMLIWSLKEGKIVKTYTGDGGIFEVCWNKEG 724
Query: 444 DFVAACIS 451
D +AAC +
Sbjct: 725 DKIAACFA 748
Score = 67.8 bits (164), Expect = 1e-11
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Frame = +2
Query: 212 GAKSHAECARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPV-LCV 270
G +S C ++ P G L SCS D ++W K + + ++E + + P
Sbjct: 278 GHQSEVNCIKWDPTGSLLASCSDDMTAKIWSMKQDKYLHEFREHSKEIYTIRWSPTGPGT 457
Query: 271 DFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDST 330
+ + ++AS S D +K+W + + L L + H V SV+FS +G + S S D +
Sbjct: 458 NNPNKNLVLASASFDSTVKLWDVELGKLLYSL-NGHRDRVYSVAFSPNGEYIASGSPDRS 634
Query: 331 ARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLK 379
I LK GK++K + G + + + +G ++ ++ TV V D +
Sbjct: 635 MLIWSLKEGKIVKTYTGDGG-IFEVCWNKEGDKIAACFANNTVCVLDFR 778
Score = 65.9 bits (159), Expect = 4e-11
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 9/176 (5%)
Frame = +2
Query: 259 TFMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRD 318
TF+ H V C+ + ++AS S D K+W ++ + L HS+ + ++ +S
Sbjct: 269 TFVGHQSEVNCIKWDPTGSLLASCSDDMTAKIWSMKQDKYLHEFRE-HSKEIYTIRWSPT 445
Query: 319 GSQ---------LLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASS 369
G L S SFDST ++ ++ GK+L GH V F+ +G + + S
Sbjct: 446 GPGTNNPNKNLVLASASFDSTVKLWDVELGKLLYSLNGHRDRVYSVAFSPNGEYIASGSP 625
Query: 370 DCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVFIFPKNTEHIVVCNKTSSIYIM 425
D ++ +W LK ++T+ GD + V + K + I C +++ ++
Sbjct: 626 DRSMLIWSLKEGKIVKTYT-------GDGGIFEV-CWNKEGDKIAACFANNTVCVL 769
Score = 59.3 bits (142), Expect = 4e-09
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 8/230 (3%)
Frame = +2
Query: 255 QAEETFMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVS 314
+ + T H P+ + +++ + I +GS D VW ++ + ++ E HS V
Sbjct: 8 ELKSTLSKHKGPIFSLKWNKKGDYILTGSCDQTAIVWDVKAEEWKQQFEF-HSGWTLDVD 184
Query: 315 FSRDGSQLLSTSFDSTARIHGLKSGKML--KEFRGHTSYVNDATFTNDGTRVITASSDCT 372
+ R+ ++S D+ +IH K G+ L + F GH S VN + G+ + + S D T
Sbjct: 185 W-RNNVSFATSSTDT--KIHVCKIGEKLPIRTFVGHQSEVNCIKWDPTGSLLASCSDDMT 355
Query: 373 VKVWDLKTTDCLQTFKPPPPLRGGDASVNSVFIFPKN------TEHIVVCNKTSSIYIMT 426
K+W +K L F R + ++ P +++V+ + + +
Sbjct: 356 AKIWSMKQDKYLHEF------REHSKEIYTIRWSPTGPGTNNPNKNLVLASASFDSTVKL 517
Query: 427 LQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKL 476
++ K S + SP GE+I DR+M +S + GK+
Sbjct: 518 WDVELGKLLYSLNGHRDRVYSVAFSPNGEYIASGSPDRSMLIWSLKEGKI 667
>TC228794 similar to UP|Q6V8V0 (Q6V8V0) Transducin-like (Fragment), complete
Length = 870
Score = 72.4 bits (176), Expect = 5e-13
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Frame = +3
Query: 263 HDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQL 322
H + + F+ ++ASGS D +I +W + + H V + ++ DG+Q+
Sbjct: 276 HQSAIYTMKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQI 455
Query: 323 LSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDG-TRVITASSDCTVKVWDLKTT 381
+S S D T R +++GK +K+ H SYVN + G V++ S D T K+WD++
Sbjct: 456 VSASPDKTVRAWDVETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQR 635
Query: 382 DCLQTFKPPPPLRGGDASVNSVFIFPKNTEH-IVVCNKTSSIYIMTLQGQVVKSFSSGKR 440
+QTF + S S IF ++ + + + MTLQG
Sbjct: 636 GSIQTFPDKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGH---------- 785
Query: 441 EGGDFVAAC-ISPKGEWIYCVGED 463
D + A +SP G ++ G D
Sbjct: 786 --QDMITAMQLSPDGSYLLTNGMD 851
Score = 66.6 bits (161), Expect = 2e-11
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Frame = +3
Query: 212 GAKSHAECARFSPDGQYLVSCSIDGFIEVWDYISGK-LKKDLQYQAEETFMMHDEPVLCV 270
G K+ ++ DG +VS S D + WD +GK +KK +++ + C
Sbjct: 402 GHKNAVLDLHWTTDGTQIVSASPDKTVRAWDVETGKQIKKMVEHLSYVNS--------CC 557
Query: 271 DFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDST 330
R ++ SGS DG K+W +R ++ + +T+V FS ++ + D+
Sbjct: 558 PSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQ--ITAVGFSDASDKIFTGGIDND 731
Query: 331 ARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVW 376
+I L+ G++ +GH + + DG+ ++T DC + +W
Sbjct: 732 VKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLLTNGMDCKLCIW 869
>TC206060 weakly similar to UP|Q9FNN2 (Q9FNN2) WD-repeat protein-like,
partial (62%)
Length = 1510
Score = 72.0 bits (175), Expect = 6e-13
Identities = 69/297 (23%), Positives = 139/297 (46%), Gaps = 6/297 (2%)
Frame = +3
Query: 221 RFSPDGQYLVSCSIDGFIEVWDY-ISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMI 279
+FS +G+YL S S D +W+ I+G+L + H +PV V +S + + +
Sbjct: 444 QFSHNGKYLASASKDQTAIIWEVGINGRL------SVKHRLSGHQKPVSSVSWSPNDQEL 605
Query: 280 ASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSG 339
+ + I+ W + T +CL+ E A G+ S S+ G +L D + + L G
Sbjct: 606 LTCGVEEAIRRWDVSTGKCLQIYEKA-GAGLVSCSWFPCGKYILCGLSDKSICMWEL-DG 779
Query: 340 KMLKEFRGH-TSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDA 398
K ++ ++G T ++D T+DG +++ V +++ +T D + F +
Sbjct: 780 KEVESWKGQKTLKISDLEITDDGEEILSICKANVVLLFNRETKD--ERFIE-------EY 932
Query: 399 SVNSVFIFPKNTEHIVVCNKTSSIYIMTLQG--QVVKSFSSGKREGGDFVAACISP-KGE 455
+ F + + ++V I++ ++G ++V + KR + +C K
Sbjct: 933 ETITSFSLSNDNKFLLVNLLNQEIHLWNIEGDPKLVGKYKGHKR-ARFIIRSCFGGLKQA 1109
Query: 456 WIYCVGEDRNMYCFSYQSGKLEHLMTVHDKEIIGVTHHP-HRNLVATFSDDHTMKLW 511
+I ED +Y + SG+L +T H + V+ +P + +++A+ SDD T+++W
Sbjct: 1110FIASGSEDSQVYIWHRSSGELIEALTGHSGSVNCVSWNPANPHMLASASDDRTIRVW 1280
Score = 49.3 bits (116), Expect = 4e-06
Identities = 54/195 (27%), Positives = 91/195 (45%), Gaps = 4/195 (2%)
Frame = +3
Query: 249 KKDLQYQAEETFMMHDEPVLCVDFSRDSEM-IASGSTDGKIKVWRIRTAQCLRRLEHAHS 307
+K L++ E+ ++ E L + S D EM + S GK ++ RT Q L AH
Sbjct: 264 EKRLEHLVEQALILQREACLFHN-SLDKEMSLYSDHHCGKTQI-PSRTLQILE----AHD 425
Query: 308 QGVTSVSFSRDGSQLLSTSFDSTARIHGLK-SGKMLKEFR--GHTSYVNDATFTNDGTRV 364
V V FS +G L S S D TA I + +G++ + R GH V+ +++ + +
Sbjct: 426 DEVWYVQFSHNGKYLASASKDQTAIIWEVGINGRLSVKHRLSGHQKPVSSVSWSPNDQEL 605
Query: 365 ITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVFIFPKNTEHIVVCNKTSSIYI 424
+T + ++ WD+ T CLQ ++ A + S FP ++I+ SI +
Sbjct: 606 LTCGVEEAIRRWDVSTGKCLQIYEK------AGAGLVSCSWFPCG-KYILCGLSDKSICM 764
Query: 425 MTLQGQVVKSFSSGK 439
L G+ V+S+ K
Sbjct: 765 WELDGKEVESWKGQK 809
>TC216518 weakly similar to UP|Q9LW87 (Q9LW87) Coatomer protein complex, beta
prime; beta'-COP protein, partial (29%)
Length = 1189
Score = 71.6 bits (174), Expect = 8e-13
Identities = 55/265 (20%), Positives = 106/265 (39%), Gaps = 1/265 (0%)
Frame = +1
Query: 248 LKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHS 307
+++ L ++ E F+ + V VD I G G I +W +T + L+ + S
Sbjct: 46 MEQTLSFEFEHEFVQNTARVKSVDMHPTEPWILLGLYSGTISIWNYQTKTEEKSLKISES 225
Query: 308 QGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITA 367
V S F + +++ + D ++ + + EF H Y+ VI+A
Sbjct: 226 P-VRSAKFIARENWIVAATDDKNIHVYNYDKMEKIVEFAEHKDYIRSLAVHPVLPYVISA 402
Query: 368 SSDCTVKVWDL-KTTDCLQTFKPPPPLRGGDASVNSVFIFPKNTEHIVVCNKTSSIYIMT 426
S D +K+W+ K C + F+ G V V PK+ + ++ I +
Sbjct: 403 SDDQVLKLWNWRKGWSCYENFE------GHSHYVMQVAFNPKDPSTFASASLDGTLKIWS 564
Query: 427 LQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLMTVHDKE 486
L G ++G + V I+ +++ +D + Y S + H+
Sbjct: 565 LDSSAPNFTLEGHQKGVNCVDYFITNDKQYLLSGSDDYTAKVWDYHSRNCVQTLEGHENN 744
Query: 487 IIGVTHHPHRNLVATFSDDHTMKLW 511
+ + HP ++ T S+D T+K+W
Sbjct: 745 VTAICAHPELPIIITASEDSTVKIW 819
Score = 70.9 bits (172), Expect = 1e-12
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Frame = +1
Query: 228 YLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFS-RDSEMIASGSTDG 286
Y++S S D +++W++ G + E F H V+ V F+ +D AS S DG
Sbjct: 388 YVISASDDQVLKLWNWRKG-------WSCYENFEGHSHYVMQVAFNPKDPSTFASASLDG 546
Query: 287 KIKVWRIRTAQCLRRLEHAHSQGVTSVSF--SRDGSQLLSTSFDSTARIHGLKSGKMLKE 344
+K+W + ++ LE H +GV V + + D LLS S D TA++ S ++
Sbjct: 547 TLKIWSLDSSAPNFTLE-GHQKGVNCVDYFITNDKQYLLSGSDDYTAKVWDYHSRNCVQT 723
Query: 345 FRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKT 380
GH + V + +ITAS D TVK+WD T
Sbjct: 724 LEGHENNVTAICAHPELPIIITASEDSTVKIWDAVT 831
Score = 35.4 bits (80), Expect = 0.062
Identities = 27/98 (27%), Positives = 42/98 (42%)
Frame = +1
Query: 225 DGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIASGST 284
D QYL+S S D +VWDY S +T H+ V + + +I + S
Sbjct: 643 DKQYLLSGSDDYTAKVWDYHS--------RNCVQTLEGHENNVTAICAHPELPIIITASE 798
Query: 285 DGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQL 322
D +K+W T + L + V S+ + + SQL
Sbjct: 799 DSTVKIWDAVTYRLQTTLNFGLKR-VWSIGYKKGSSQL 909
>TC230628 homologue to UP|Q9XIJ3 (Q9XIJ3) T10O24.21, partial (41%)
Length = 1119
Score = 71.2 bits (173), Expect = 1e-12
Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 7/260 (2%)
Frame = +2
Query: 259 TFMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRD 318
T+M H + V + FS D S D IK W T Q + V ++ D
Sbjct: 5 TYMGHSKAVRDICFSNDGTKFLSAGYDKNIKYWDTETGQVISTFATGKIPYVVKLNPDED 184
Query: 319 GSQLLSTSFDSTARIH-GLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWD 377
+L + + +G++ +E+ H VN TF ++ R +T+S D +++VW+
Sbjct: 185 KQNVLLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 364
Query: 378 LKTTDCLQTFKPPPPLRGGDASVNSVFIFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSS 437
++ P S+ S+ + P N + + + I I + + + +
Sbjct: 365 FSIPVVIKYISEPHM-----HSMPSISLHP-NANWLAAQSLDNQILIYSTREKF--QLNK 520
Query: 438 GKREGGDFVA--AC---ISPKGEWIYCVGEDRNMYCFSYQSGKLEHLMTVHDKEIIGVTH 492
KR GG VA AC SP G+++ + + + +++ K+ + H+ IG
Sbjct: 521 RKRFGGHIVAGYACQVNFSPDGQYVMSGDGEGKCWFWDWKTCKVYRTLKCHEGVCIGCEW 700
Query: 493 HP-HRNLVATFSDDHTMKLW 511
HP ++ VAT D +K W
Sbjct: 701 HPLEQSKVATCGWDGMIKYW 760
Score = 43.9 bits (102), Expect = 2e-04
Identities = 17/45 (37%), Positives = 27/45 (59%)
Frame = +2
Query: 343 KEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQTF 387
+ + GH+ V D F+NDGT+ ++A D +K WD +T + TF
Sbjct: 2 RTYMGHSKAVRDICFSNDGTKFLSAGYDKNIKYWDTETGQVISTF 136
Score = 32.3 bits (72), Expect = 0.52
Identities = 21/71 (29%), Positives = 33/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 222 FSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVL-CVDFSRDSEMIA 280
FSPDGQY++S +G WD+ + K+ + T H+ + C + +A
Sbjct: 572 FSPDGQYVMSGDGEGKCWFWDWKTCKVYR--------TLKCHEGVCIGCEWHPLEQSKVA 727
Query: 281 SGSTDGKIKVW 291
+ DG IK W
Sbjct: 728 TCGWDGMIKYW 760
>TC220018 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K8K14 (AT5g67320/K8K14_4),
partial (42%)
Length = 1050
Score = 70.9 bits (172), Expect = 1e-12
Identities = 46/177 (25%), Positives = 86/177 (47%), Gaps = 3/177 (1%)
Frame = +1
Query: 206 SHTIKF--GAKSHAECARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMH 263
+H IK G + C ++ P G L SCS D ++W DL+ ++E + +
Sbjct: 250 THPIKTFTGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDTYLHDLREHSKEIYTIR 429
Query: 264 DEPVLCVDFSRDSEMI-ASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQL 322
P + + +++ AS S D +K+W + + + L+ H V SV+FS +G L
Sbjct: 430 WSPTGPGTNNPNHKLVLASASFDSTVKLWDVELGKLIYSLD-GHRHPVYSVAFSPNGDYL 606
Query: 323 LSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLK 379
+S S D + I L+ GK++K + G+ + + + +G ++ ++ TV V D +
Sbjct: 607 VSGSLDRSMHIWSLRDGKIVKTYTGNGG-IFEVCWNKEGDKIAACFANNTVCVLDFR 774
Score = 70.5 bits (171), Expect = 2e-12
Identities = 68/248 (27%), Positives = 115/248 (45%), Gaps = 17/248 (6%)
Frame = +1
Query: 221 RFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIA 280
+++ G YL++ S D VWD + + K+ ++ H P L VD+ R++ A
Sbjct: 52 KWNKKGDYLLTGSCDQTAIVWDVKAEEWKQQFEF--------HSGPTLDVDW-RNNVSFA 204
Query: 281 SGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGK 340
+ STD I V +I ++ H V V + GS L S S D TA+I +K
Sbjct: 205 TSSTDNMIHVCKIGETHPIKTFT-GHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDT 381
Query: 341 MLKEFRGHTSYVNDATF--TNDGTR-------VITASSDCTVKVWDLKTTDCLQTFKPPP 391
L + R H+ + + T GT + +AS D TVK+WD++ + +
Sbjct: 382 YLHDLREHSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWDVELGKLIYS----- 546
Query: 392 PLRGGDASVNSVFIFPKNTEHIVVCNKTSSIYIMTLQ-GQVVKSFSSGK-------REGG 443
L G V SV F N +++V + S++I +L+ G++VK+++ + G
Sbjct: 547 -LDGHRHPVYSV-AFSPNGDYLVSGSLDRSMHIWSLRDGKIVKTYTGNGGIFEVCWNKEG 720
Query: 444 DFVAACIS 451
D +AAC +
Sbjct: 721 DKIAACFA 744
Score = 56.2 bits (134), Expect = 3e-08
Identities = 48/231 (20%), Positives = 95/231 (40%), Gaps = 9/231 (3%)
Frame = +1
Query: 255 QAEETFMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVS 314
+ + T H P+ + +++ + + +GS D VW ++ + ++ E HS V
Sbjct: 4 ELKSTLSKHKGPIFSLKWNKKGDYLLTGSCDQTAIVWDVKAEEWKQQFEF-HSGPTLDVD 180
Query: 315 FSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVK 374
+ R+ ++S D+ + + +K F GH VN + G+ + + S D T K
Sbjct: 181 W-RNNVSFATSSTDNMIHVCKIGETHPIKTFTGHQGEVNCVKWDPTGSLLASCSDDITAK 357
Query: 375 VWDLKTTDCLQTFKPPPPLRGGDASVNSVFIFP-----KNTEHIVVCNKTSSIYIMTL-- 427
+W +K L LR + ++ P N H +V S + L
Sbjct: 358 IWSMKQDTYLH------DLREHSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWD 519
Query: 428 --QGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKL 476
G+++ S + + SP G+++ DR+M+ +S + GK+
Sbjct: 520 VELGKLIYSLDGHRH---PVYSVAFSPNGDYLVSGSLDRSMHIWSLRDGKI 663
>TC209542
Length = 1445
Score = 70.9 bits (172), Expect = 1e-12
Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 6/299 (2%)
Frame = +2
Query: 220 ARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMI 279
ARF+ DG Y++SC D I +W+ G K T+ H V V ++D+ +
Sbjct: 62 ARFNGDGNYVLSCGKDRTIRLWNPHRGIHIK--------TYKSHAREVRDVHVTQDNSKL 217
Query: 280 ASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSG 339
S D +I W + T + +R+ H V V F+ + S ++S +D + R +S
Sbjct: 218 CSCGGDRQIFYWDVATGRVIRKFR-GHDGEVNGVKFNENSSGVVSAGYDQSLRAWDCRSH 394
Query: 340 KM--LKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLK----TTDCLQTFKPPPPL 393
++ V T T +I S D TV+ +D++ T+D L
Sbjct: 395 STEPIQIIDTFADSVMSVCLTK--TEIIGGSVDGTVRTFDIRIGRETSDNL--------- 541
Query: 394 RGGDASVNSVFIFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACISPK 453
VN V + + C ++ + G++++ + G + C++
Sbjct: 542 ---GQPVNCVSMSNDGNCILAGCLDSTLRLLDRSTGELLQEYK-GHTNKSYKLDCCLTNT 709
Query: 454 GEWIYCVGEDRNMYCFSYQSGKLEHLMTVHDKEIIGVTHHPHRNLVATFSDDHTMKLWK 512
+ V ED +Y + + H + V++HP N + T S D T+++WK
Sbjct: 710 DAHVTGVSEDGFIYFWDLVDASVVSRFKAHTSVVTSVSYHPKENCMVTSSVDGTIRVWK 886
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/144 (18%), Positives = 55/144 (37%)
Frame = +2
Query: 339 GKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDA 398
GK + +GH V A F DG V++ D T+++W+ ++T+K
Sbjct: 14 GKEVNVLKGHEGGVLAARFNGDGNYVLSCGKDRTIRLWNPHRGIHIKTYK------SHAR 175
Query: 399 SVNSVFIFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACISPKGEWIY 458
V V + N++ Y G+V++ F + G+ + +
Sbjct: 176 EVRDVHVTQDNSKLCSCGGDRQIFYWDVATGRVIRKF---RGHDGEVNGVKFNENSSGVV 346
Query: 459 CVGEDRNMYCFSYQSGKLEHLMTV 482
G D+++ + +S E + +
Sbjct: 347 SAGYDQSLRAWDCRSHSTEPIQII 418
>TC228105 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {Arabidopsis
thaliana;} , complete
Length = 1113
Score = 68.6 bits (166), Expect = 7e-12
Identities = 60/197 (30%), Positives = 89/197 (44%), Gaps = 21/197 (10%)
Frame = +3
Query: 221 RFSPDGQYL-VSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEP-----VLCVDFSR 274
RF P G L V+ +++WD S +L L E D+ VL V +S
Sbjct: 321 RFDPKGAILAVAGGGSASVKLWDTSSWELVATLSIPRPEGQKPTDKSGSKKFVLSVAWSP 500
Query: 275 DSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLST-SFDSTARI 333
D + +A GS DG I V+ + A+ L LE H V S+ +S +LL T S D +
Sbjct: 501 DGKRLACGSMDGTISVFDVPRAKFLHHLE-GHFMPVRSLVYSPYDPRLLFTASDDGNVHM 677
Query: 334 HGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQT------- 386
+ + ++ GH S+V + DG + T SSD +V++WDL +QT
Sbjct: 678 YDAEGKALIGTMSGHASWVLCVDVSPDGAAIATGSSDRSVRLWDLNMRASVQTMSNHSDQ 857
Query: 387 -----FKPP--PPLRGG 396
F+PP +RGG
Sbjct: 858 VWGVAFRPPGGSDVRGG 908
Score = 49.3 bits (116), Expect = 4e-06
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 7/183 (3%)
Frame = +3
Query: 202 PTNLSHTIKFGAKSHAECARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFM 261
P T K G+K +SPDG+ L S+DG I V+D K L+
Sbjct: 432 PEGQKPTDKSGSKKFVLSVAWSPDGKRLACGSMDGTISVFDVPRAKFLHHLE-------- 587
Query: 262 MHDEPVLCVDFS-RDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGS 320
H PV + +S D ++ + S DG + ++ + L H+ V V S DG+
Sbjct: 588 GHFMPVRSLVYSPYDPRLLFTASDDGNVHMYDAE-GKALIGTMSGHASWVLCVDVSPDGA 764
Query: 321 QLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTND------GTRVITASSDCTVK 374
+ + S D + R+ L ++ H+ V F G R+ + S D ++
Sbjct: 765 AIATGSSDRSVRLWDLNMRASVQTMSNHSDQVWGVAFRPPGGSDVRGGRLASVSDDKSIS 944
Query: 375 VWD 377
++D
Sbjct: 945 LYD 953
>TC222867 similar to UP|Q8L830 (Q8L830) WD40-repeat protein (Fragment),
partial (23%)
Length = 591
Score = 68.6 bits (166), Expect = 7e-12
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +1
Query: 306 HSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVI 365
H +G+ SV FS +++ S D T RI + G LK F GHTS V A F GT+++
Sbjct: 46 HKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFEGHTSSVLRALFVTRGTQIV 225
Query: 366 TASSDCTVKVWDLKTTDCLQTF 387
+ +D VK+W +KT +C+ T+
Sbjct: 226 SCGADGLVKLWTVKTNECVATY 291
Score = 49.7 bits (117), Expect = 3e-06
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Frame = +1
Query: 260 FMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDG 319
F H + V+FS + + + S D I++W I CL+ E H+ V F G
Sbjct: 37 FKGHKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFE-GHTSSVLRALFVTRG 213
Query: 320 SQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVW-DL 378
+Q++S D ++ +K+ + + + H V ++ T D V +W D
Sbjct: 214 TQIVSCGADGLVKLWTVKTNECVATYDHHEDKVWALAVGRKTEKLATGGGDAVVNLWFDS 393
Query: 379 KTTDCLQTFK 388
D + F+
Sbjct: 394 TAADKEEAFR 423
Score = 48.9 bits (115), Expect = 5e-06
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
Frame = +1
Query: 202 PTNLSHTIKFGAKSHAECARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFM 261
P +S + G K FSP Q +V+ S D I +W G K TF
Sbjct: 13 PDLVSVVVFKGHKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLK--------TFE 168
Query: 262 MHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSR---- 317
H VL F I S DG +K+W ++T +C+ +H H V +++ R
Sbjct: 169 GHTSSVLRALFVTRGTQIVSCGADGLVKLWTVKTNECVATYDH-HEDKVWALAVGRKTEK 345
Query: 318 ----DGSQLLSTSFDSTA 331
G +++ FDSTA
Sbjct: 346 LATGGGDAVVNLWFDSTA 399
Score = 38.5 bits (88), Expect = 0.007
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 345 FRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVF 404
F+GH + F+ V+TAS D T+++W + CL+TF+ G +SV
Sbjct: 37 FKGHKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFE------GHTSSVLRAL 198
Query: 405 IFPKNTEHIVVCNKTSSIYIMTLQ 428
+ T+ IV C + + T++
Sbjct: 199 FVTRGTQ-IVSCGADGLVKLWTVK 267
Score = 37.4 bits (85), Expect = 0.016
Identities = 22/91 (24%), Positives = 38/91 (41%)
Frame = +1
Query: 220 ARFSPDGQYLVSCSIDGFIEVWDYISGKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMI 279
A F G +VSC DG +++W + + T+ H++ V + R +E +
Sbjct: 193 ALFVTRGTQIVSCGADGLVKLWTVKTN--------ECVATYDHHEDKVWALAVGRKTEKL 348
Query: 280 ASGSTDGKIKVWRIRTAQCLRRLEHAHSQGV 310
A+G D + +W TA +GV
Sbjct: 349 ATGGGDAVVNLWFDSTAADKEEAFRKEEEGV 441
>TC211342 similar to UP|Q9LVF2 (Q9LVF2) Arabidopsis thaliana genomic DNA,
chromosome 3, P1 clone: MIL23, partial (29%)
Length = 862
Score = 67.0 bits (162), Expect = 2e-11
Identities = 50/192 (26%), Positives = 83/192 (43%)
Frame = +1
Query: 186 LFRGTAAMKQDVDDMYPTNLSHTIKFGAKSHAECARFSPDGQYLVSCSIDGFIEVWDYIS 245
LFR Q + +N+S T+K A SPD +Y+ +D ++V + +
Sbjct: 145 LFRLRGHRDQAAKQLTVSNVS-TMKMN--DDALVVAISPDAKYIAVALLDSTVKV--HFA 309
Query: 246 GKLKKDLQYQAEETFMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHA 305
K L H PVLC+D S D ++I +GS D IK+W + C + + A
Sbjct: 310 DTFKFFLSLYG------HKLPVLCMDISSDGDLIVTGSADKNIKIWGLDFGDCHKSI-FA 468
Query: 306 HSQGVTSVSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVI 365
H+ V +V F + S D + ++L GH + + +N G ++
Sbjct: 469 HADSVMAVQFVPKTHYVFSVGKDRLVKYWDADKFELLLTLEGHHADIWCLAVSNRGDFIV 648
Query: 366 TASSDCTVKVWD 377
T S D +++ WD
Sbjct: 649 TGSHDRSIRRWD 684
Score = 52.4 bits (124), Expect = 5e-07
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 17/144 (11%)
Frame = +1
Query: 257 EETFMMHDEPVLCVDFSRDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTS---- 312
E T H V + +++ ++ASGS D + +W + L RL Q
Sbjct: 19 ETTLNGHKGAVTTLRYNKAGSLLASGSRDNDVILWDVVGETGLFRLRGHRDQAAKQLTVS 198
Query: 313 -------------VSFSRDGSQLLSTSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTN 359
V+ S D + DST ++H + K GH V ++
Sbjct: 199 NVSTMKMNDDALVVAISPDAKYIAVALLDSTVKVHFADTFKFFLSLYGHKLPVLCMDISS 378
Query: 360 DGTRVITASSDCTVKVWDLKTTDC 383
DG ++T S+D +K+W L DC
Sbjct: 379 DGDLIVTGSADKNIKIWGLDFGDC 450
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.134 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,953,697
Number of Sequences: 63676
Number of extensions: 313347
Number of successful extensions: 2129
Number of sequences better than 10.0: 192
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1968
length of query: 513
length of database: 12,639,632
effective HSP length: 101
effective length of query: 412
effective length of database: 6,208,356
effective search space: 2557842672
effective search space used: 2557842672
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC142394.6