TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC142394.1 - phase: 0 /pseudo
         (426 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC209923 weakly similar to UP|Q84UV0 (Q84UV0) Linalool synthase,...   418  e-117
TC211089 weakly similar to UP|O23517 (O23517) LIMONENE cyclase l...    83  3e-16
TC213453 weakly similar to UP|O64961 (O64961) Epidermal germacre...    74  1e-13
CO981322                                                               73  3e-13
TC220922 weakly similar to UP|Q940E7 (Q940E7) D-limonene synthas...    54  1e-07
TC211521 weakly similar to UP|Q9FRX5 (Q9FRX5) Ent-kaurene syntha...    48  7e-06
BG725182 weakly similar to GP|2465021|emb| sesquiterpene cyclase...    42  4e-04
TC232483 UP|O82687 (O82687) Tyrosine phosphatase 1, complete           32  0.54
TC224443                                                               30  2.7
CB063803                                                               29  3.5
TC208051 weakly similar to UP|Q8S341 (Q8S341) Purple acid phosph...    29  3.5
AW349404                                                               29  3.5
TC230417 similar to UP|Q9C5V6 (Q9C5V6) Topoisomerase 6 subunit B...    29  3.5
TC214948 weakly similar to UP|Q9ZVV1 (Q9ZVV1) T5A14.4 protein, p...    29  4.6
TC214946 homologue to UP|Q6TEC7 (Q6TEC7) Defender against progra...    29  4.6
TC222612                                                               28  6.0
TC206775 similar to UP|Q7XXP9 (Q7XXP9) RNA helicase (Fragment), ...    28  6.0
TC216657 similar to UP|MHK_ARATH (P43294) Serine/threonine-prote...    28  6.0
TC216458 similar to UP|Q9WUG9 (Q9WUG9) ARL-6 interacting protein...    28  7.9
TC214108 similar to UP|RK29_ARATH (Q9FJP3) 50S ribosomal protein...    28  7.9

>TC209923 weakly similar to UP|Q84UV0 (Q84UV0) Linalool synthase, partial
           (17%)
          Length = 1215

 Score =  418 bits (1074), Expect = e-117
 Identities = 199/282 (70%), Positives = 240/282 (84%), Gaps = 1/282 (0%)
 Frame = +1

Query: 146 AIYVSNTLQYPIHYGLSRFMDK-SIFINDLKAKNKWICLDELAKMNSSIVKFMNKNESVE 204
           A+YV+ TLQ+P+HY LSRF D  SI +ND K K +W CL+ELA++NSSIV+F+N+NE  +
Sbjct: 1   AMYVAKTLQHPLHYDLSRFRDDTSILLNDFKTKREWECLEELAEINSSIVRFVNQNEITQ 180

Query: 205 VFKWWEDLGLAKEMKFAGYNPLKWYMWPMACFTDPCFSNERVELTKPISLVYIIDDIFDV 264
           V+KWW+DLGL  E+KFA Y PLKWYMWPMACFTDP FS +R+ELTKPISLVYIIDDIFDV
Sbjct: 181 VYKWWKDLGLNNEVKFARYQPLKWYMWPMACFTDPRFSEQRIELTKPISLVYIIDDIFDV 360

Query: 265 HGTLDQLTLFTEAVNRWEMDGAENLPNFMKVSLSSLYKVTNNFAEMVYKKHGFNPIDTLK 324
           +GTLDQLTLFT+A+ RWE+   E LP+FMK+ L  LY++TN+FAE +YKKHGFNPI+TLK
Sbjct: 361 YGTLDQLTLFTDAIKRWELASTEQLPDFMKMCLRVLYEITNDFAEKIYKKHGFNPIETLK 540

Query: 325 ISWVRLLNAFLKEAHWLNSGILPTTEEYLNNGIVSTGVHVVLIHAFFLMDHAKGITKETL 384
            SWVRLLNAFL+EAHWLNSG LP + EYLNNGIVSTGVHVVL+H+FFLMD++  I  E +
Sbjct: 541 RSWVRLLNAFLEEAHWLNSGHLPRSGEYLNNGIVSTGVHVVLVHSFFLMDYS--INNEIV 714

Query: 385 SILDEEFPNIIYSVAKILRLSDDLEGVKSGDQNGLDGSYLNC 426
           +I+D   P II+SVAKILRLSDDLEG KS DQNGLDGSY++C
Sbjct: 715 AIVD-NVPQIIHSVAKILRLSDDLEGAKSEDQNGLDGSYIDC 837


>TC211089 weakly similar to UP|O23517 (O23517) LIMONENE cyclase like protein,
           partial (9%)
          Length = 626

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 50/158 (31%), Positives = 81/158 (50%)
 Frame = +2

Query: 151 NTLQYPIHYGLSRFMDKSIFINDLKAKNKWICLDELAKMNSSIVKFMNKNESVEVFKWWE 210
           + L+ P H+ +  F  K       + KN    L EL K+N ++++   + E  ++ +WWE
Sbjct: 107 HALELPSHWRVQWFEVKWHVEQYKQQKNVDPILLELTKLNFNMIQAKLQIEVKDLSRWWE 286

Query: 211 DLGLAKEMKFAGYNPLKWYMWPMACFTDPCFSNERVELTKPISLVYIIDDIFDVHGTLDQ 270
           +LG+ KE+ FA    ++ +M       +P +   R  LTK I  V I DD+ D+H + ++
Sbjct: 287 NLGIKKELSFARNRLVESFMCAAGVAFEPKYKAVRKWLTKVIIFVLINDDVDDIHASFEE 466

Query: 271 LTLFTEAVNRWEMDGAENLPNFMKVSLSSLYKVTNNFA 308
           L   T A  RW+    E LP +MK  + +L  VTN  A
Sbjct: 467 LKPITLAFERWDDKELEELPQYMKSCVHALKDVTNEIA 580


>TC213453 weakly similar to UP|O64961 (O64961) Epidermal germacrene C
           synthase (Sesquiterpene synthase 1), partial (13%)
          Length = 432

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
 Frame = +3

Query: 3   KQVHKKLVTSEDPTENFHL--IDIIQRLGIEHYFVEEIKVALEKQFLILSSNPIDFVSSH 60
           + V K +V+  D   +F L  ID IQRLG+ ++F  EI  AL + + I + +       +
Sbjct: 45  EDVRKMIVSPIDNNFSFKLNFIDSIQRLGVSYHFEHEIDRALHQIYDISTKDNNIISHDN 224

Query: 61  ELYEVALAFRLLRQGGYYVNAELFDCLKCSKKSLRVKYGEDVKGLIALYEASQLSIEGED 120
           +L+ VAL FRLLRQ GY + + +F   K        +   D++G+++LYEA+QL   GE+
Sbjct: 225 DLHHVALLFRLLRQHGYRITSGVFLKFKDQTGKFNERLANDIQGMLSLYEAAQLRFHGEE 404

Query: 121 GLNDL 125
            L ++
Sbjct: 405 ILEEV 419


>CO981322 
          Length = 691

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = -2

Query: 205 VFKWW-EDLGLAKEMKFAGYNPLKWYMWPMACFTDPCFSNERVELTKPISLVYIIDDIFD 263
           VF+WW +DL ++ +  F     ++   W +  + +P +S  R  + K I++  IIDD++D
Sbjct: 327 VFRWWVKDLNVSTKFPFVRDRIVECCFWILGVYIEPQYSLARRIMMKVIAISSIIDDVYD 148

Query: 264 VHGTLDQLTLFTEAVNRWEMDGAENLPNFMKVSLSSLYKV 303
            +GT+D+L +FT+A+ RW++    +LP +MK+  S+   V
Sbjct: 147 SYGTIDELEIFTDAIERWDICSLVDLPEYMKLCYSAXXDV 28


>TC220922 weakly similar to UP|Q940E7 (Q940E7) D-limonene synthase, partial
           (13%)
          Length = 608

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
 Frame = +1

Query: 323 LKISWVRLLNAFLKEAHWLNSGILPTTEEYLNNGIVSTGVHVVLIHAFFLMDHAKGITKE 382
           LK +W+    A   EA W N G +P+ EEYL+N  +S+   V+L+ ++F          +
Sbjct: 16  LKKAWIDFCKALYVEAKWYNKGYIPSLEEYLSNAWISSSGPVILLLSYF------ATMNQ 177

Query: 383 TLSILD--EEFPNIIYSVAKILRLSDDLEGVKSGDQNGLDGSYLNC 426
            + I D    + +++Y+V+ I+RL +DL    +  + G   S + C
Sbjct: 178 AMDIDDFLHTYEDLVYNVSLIIRLCNDLGTTAAEREKGDVASSILC 315


>TC211521 weakly similar to UP|Q9FRX5 (Q9FRX5) Ent-kaurene synthase, partial
           (24%)
          Length = 980

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 30/143 (20%), Positives = 64/143 (43%), Gaps = 2/143 (1%)
 Frame = +2

Query: 278 VNRWEMD-GAENLPNFMKVSLSSLYKVTNNFAEMVYKKHGFNPIDTLKISWVRLLNAFLK 336
           V +W++D         +K+  S+++       E   K+ G N  + +   W+ L+ +  +
Sbjct: 2   VEKWDVDINTVCCSETVKIIFSAIHSTVCEIGEKSVKQQGRNVKNNVIKIWLNLVQSMFR 181

Query: 337 EAHWLNSGILPTTEEYLNNGIVSTGVHVVLIHAFFLMDHAKGITKETLSILDEEFPNIIY 396
           EA WL +  +PT  +Y+ N  +S  +  +++ A +L+       K +  + +    N +Y
Sbjct: 182 EAEWLRTKTVPTIGDYMENAYISFALGPIVLPALYLVG-----PKLSDEVTENHELNYLY 346

Query: 397 SVAKIL-RLSDDLEGVKSGDQNG 418
            +     RL +D+   K   + G
Sbjct: 347 KLMSTCGRLLNDIHSFKRESEEG 415


>BG725182 weakly similar to GP|2465021|emb| sesquiterpene cyclase {Fragaria
           vesca}, partial (11%)
          Length = 308

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 33/111 (29%), Positives = 52/111 (46%)
 Frame = +3

Query: 293 MKVSLSSLYKVTNNFAEMVYKKHGFNPIDTLKISWVRLLNAFLKEAHWLNSGILPTTEEY 352
           MK+  S+L  V     E   +K G N +  +K    RL+ A++ EA W +    PT EEY
Sbjct: 3   MKLCYSALLDVFEE-TEQEMRKQGKNTLRQIK----RLVQAYITEARWFHCNHTPTMEEY 167

Query: 353 LNNGIVSTGVHVVLIHAFFLMDHAKGITKETLSILDEEFPNIIYSVAKILR 403
           +    +S G  ++ I +F  M+     T E + I     P I+ + + I R
Sbjct: 168 MQVATMSCGFAMLTIVSFLGMED----TTEEVLIWATSDPKIVAAASIISR 308


>TC232483 UP|O82687 (O82687) Tyrosine phosphatase 1, complete
          Length = 1412

 Score = 32.0 bits (71), Expect = 0.54
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = -3

Query: 342 NSGILPTTEEYLNNGIVSTGVHVVLIHAFFLMDHAKGITKETLSILDEEFPNIIYSVAK 400
           N  I   +   L+  I+ST  H+V+IH     D+ + +      ILD+ FP I+ S+ K
Sbjct: 684 NRNITNFSRPILSLKIISTFCHLVIIHQSSKHDNCRAV------ILDDHFPEILVSMLK 526


>TC224443 
          Length = 670

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 13/37 (35%), Positives = 20/37 (53%)
 Frame = -1

Query: 26  QRLGIEHYFVEEIKVALEKQFLILSSNPIDFVSSHEL 62
           Q  G +HY++   K +L  QF+  +   +D VS H L
Sbjct: 160 QGFGYQHYYMRRAKASLSNQFMKSNKINLDLVSFHLL 50


>CB063803 
          Length = 411

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 155 YPIHYGLSRFMDKSIFINDLKAKNKWICLDELAKMN 190
           YP+   +S F  KSI+ + +  +N W   D+L  +N
Sbjct: 110 YPVSLPISLFQSKSIYFSSMMKQNAWT*YDKL*VLN 217


>TC208051 weakly similar to UP|Q8S341 (Q8S341) Purple acid phosphatase,
           partial (84%)
          Length = 1249

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
 Frame = +3

Query: 197 MNKNESVEVFKWWEDLGLAKEMKFAGYNPLKWYMW-----------PMACFTDPCFSNER 245
           + KN ++ ++ W  ++G  KE     ++P++W +W            +  FT        
Sbjct: 135 LQKNNNLLIY-WSLEIGEEKEPTINLWSPIRWELWGRN*I*IL*SPQVTIFTKMD*KGLM 311

Query: 246 VELTKPISLVYIIDDIFDVHGTLDQLTLFTEAVNR 280
           ++ +  +S    +      HGTL  +T+ TEA+ R
Sbjct: 312 IQHSTSLSSTCTLPPACKRHGTLFWVTMTTEAMLR 416


>AW349404 
          Length = 531

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 20/67 (29%), Positives = 35/67 (51%), Gaps = 1/67 (1%)
 Frame = -2

Query: 48  ILSSNPIDFVSSHELYEV-ALAFRLLRQGGYYVNAELFDCLKCSKKSLRVKYGEDVKGLI 106
           +L+ + +D + S  L+E  + A RLL+QGG Y+N    D      +  R++  + V G +
Sbjct: 485 VLNLSLVDLLVSSGLFESKSAARRLLKQGGLYLNNNRVD-----NEGKRIEAADIVDGKV 321

Query: 107 ALYEASQ 113
            L  A +
Sbjct: 320 LLLSAGK 300


>TC230417 similar to UP|Q9C5V6 (Q9C5V6) Topoisomerase 6 subunit B, partial
           (34%)
          Length = 937

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 22/91 (24%), Positives = 41/91 (44%)
 Frame = +1

Query: 93  SLRVKYGEDVKGLIALYEASQLSIEGEDGLNDLGYLSCELLQAWLPRHQDHIQAIYVSNT 152
           S +++YG+D   L++    + ++ E            CE L         H++ +     
Sbjct: 496 SKKIRYGDDDAELLSKVSENLITKE----------TLCEKLSK-------HVEQVDYEMA 624

Query: 153 LQYPIHYGLSRFMDKSIFINDLKAKNKWICL 183
           L+Y    G+S    ++I+I  L+A+NK I L
Sbjct: 625 LEYATQSGVSEEPRETIYIQSLEAENKMIDL 717


>TC214948 weakly similar to UP|Q9ZVV1 (Q9ZVV1) T5A14.4 protein, partial (58%)
          Length = 1024

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 16/46 (34%), Positives = 29/46 (62%)
 Frame = +1

Query: 150 SNTLQYPIHYGLSRFMDKSIFINDLKAKNKWICLDELAKMNSSIVK 195
           S ++QYP +  L RF+ +S   N+  + N  IC DE+ ++ SS+++
Sbjct: 874 SRSIQYPSYRDLQRFLAESTAGNE--STNSTIC-DEVCQLKSSLLE 1002


>TC214946 homologue to UP|Q6TEC7 (Q6TEC7) Defender against programmed cell
           death, partial (12%)
          Length = 1085

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 16/46 (34%), Positives = 29/46 (62%)
 Frame = +3

Query: 150 SNTLQYPIHYGLSRFMDKSIFINDLKAKNKWICLDELAKMNSSIVK 195
           S ++QYP +  L RF+ +S   N+  + N  IC DE+ ++ SS+++
Sbjct: 177 SRSIQYPSYRDLQRFLAESTAGNE--STNSTIC-DEVCQLKSSLLE 305


>TC222612 
          Length = 470

 Score = 28.5 bits (62), Expect = 6.0
 Identities = 15/62 (24%), Positives = 28/62 (44%)
 Frame = -2

Query: 255 VYIIDDIFDVHGTLDQLTLFTEAVNRWEMDGAENLPNFMKVSLSSLYKVTNNFAEMVYKK 314
           +Y I  +   +  LD+ T+    +    + GAE L      +L  L  + NNF+ +  ++
Sbjct: 385 IYKIQQLLRAYSFLDEFTIKDRNMEESSISGAEILLRSRSSTLLGLINLNNNFSNIRARE 206

Query: 315 HG 316
            G
Sbjct: 205 QG 200


>TC206775 similar to UP|Q7XXP9 (Q7XXP9) RNA helicase (Fragment), partial
           (36%)
          Length = 445

 Score = 28.5 bits (62), Expect = 6.0
 Identities = 17/63 (26%), Positives = 32/63 (49%)
 Frame = +1

Query: 104 GLIALYEASQLSIEGEDGLNDLGYLSCELLQAWLPRHQDHIQAIYVSNTLQYPIHYGLSR 163
           G+  L E S + ++  D + D+G+   +++++ L +     Q +  S T   P+HY    
Sbjct: 19  GICCLKEVSFVVLDEADRMLDMGFE--QIVRSILGQTCSDRQMVMFSATWPLPVHYLAQE 192

Query: 164 FMD 166
           FMD
Sbjct: 193 FMD 201


>TC216657 similar to UP|MHK_ARATH (P43294) Serine/threonine-protein kinase
           MHK  , partial (41%)
          Length = 1393

 Score = 28.5 bits (62), Expect = 6.0
 Identities = 27/118 (22%), Positives = 43/118 (35%), Gaps = 6/118 (5%)
 Frame = +2

Query: 160 GLSRFMDKSIFINDLKAKNKWICLDELAKMNSSIVKFMNKNESVEVFKWWEDLGLAKEMK 219
           GLS    K  F  DLK +N  +  D L                        D GLA+E+ 
Sbjct: 20  GLSHMHKKGFFHRDLKPENMLVTNDVLK---------------------IADFGLAREVS 136

Query: 220 ----FAGYNPLKWYMWPMACFTDPCFSN--ERVELTKPISLVYIIDDIFDVHGTLDQL 271
               +  Y   +WY  P      PC++   +   +   ++ ++ +  IF     +DQL
Sbjct: 137 SMPPYTQYVSTRWYRAPEVLLRAPCYTPAVDMWAVGAILAELFTLTPIFPGESEIDQL 310


>TC216458 similar to UP|Q9WUG9 (Q9WUG9) ARL-6 interacting protein-5
           (Fragment), partial (14%)
          Length = 1207

 Score = 28.1 bits (61), Expect = 7.9
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 205 VFKWWEDLGLAKEMKFAGYNPLKWYMWPMACFTDPCF 241
           ++ W   LG+  ++ F  + PL  + W   CF   C+
Sbjct: 569 LYMWSATLGVCLDIFFCKFLPLVCFCWSPDCFMGSCY 679


>TC214108 similar to UP|RK29_ARATH (Q9FJP3) 50S ribosomal protein L29,
           chloroplast precursor, partial (68%)
          Length = 1202

 Score = 28.1 bits (61), Expect = 7.9
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -3

Query: 280 RWEMDGAENLPNFMKVSLSSLYKVTNNFAEMVYKKHGFNPI-DTLKISWVRLL-NAFLKE 337
           RW  + A  LP F+K+S   L     NF+  ++ KH  NP+    + + + L+ + FLK 
Sbjct: 501 RWSYNNAF-LPFFIKLSGQPLIDTLLNFSFPLHSKHASNPLAHATEFAGLELVASRFLKA 325

Query: 338 AH 339
            H
Sbjct: 324 KH 319


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.321    0.139    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,677,666
Number of Sequences: 63676
Number of extensions: 273818
Number of successful extensions: 1216
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of query: 426
length of database: 12,639,632
effective HSP length: 100
effective length of query: 326
effective length of database: 6,272,032
effective search space: 2044682432
effective search space used: 2044682432
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)