BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142222.7 + phase: 0
(555 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC230189 similar to UP|Q9SCR0 (Q9SCR0) Scarecrow-like 7 (SCL7), ... 245 4e-65
BQ296629 similar to GP|17064924|gb SCARECROW gene regulator {Ara... 204 6e-53
TC230188 similar to UP|Q8W4I8 (Q8W4I8) SCARECROW gene regulator,... 117 6e-45
TC204219 similar to UP|Q7Y1B6 (Q7Y1B6) GAI-like protein, partial... 171 8e-43
TC228139 similar to UP|Q8GVE1 (Q8GVE1) Chitin-inducible gibberel... 168 5e-42
TC226166 similar to UP|O23724 (O23724) GAI protein, partial (70%) 167 9e-42
TC228546 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partia... 161 8e-40
TC227563 similar to PIR|E96542|E96542 scarecrow-like protein [im... 108 3e-39
TC227564 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-... 142 3e-34
TC209743 similar to PIR|E86347|E86347 scarecrow-like 1 protein F... 132 4e-31
TC219179 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-... 132 5e-31
TC226165 GAI1 [Glycine max] 129 3e-30
CO981442 126 3e-29
TC231668 homologue to UP|Q9AVK4 (Q9AVK4) SCARECROW, partial (28%) 125 4e-29
TC217781 similar to UP|O81316 (O81316) F6N15.20 protein (Scarecr... 123 2e-28
TC220187 similar to PIR|E86347|E86347 scarecrow-like 1 protein F... 120 2e-27
TC226882 similar to UP|O81316 (O81316) F6N15.20 protein (Scarecr... 115 4e-26
TC220762 similar to UP|Q6S5L6 (Q6S5L6) GAI protein, partial (27%) 115 5e-26
TC229255 similar to UP|Q7X9T5 (Q7X9T5) SCARECROW-like protein, p... 112 5e-26
TC204215 similar to UP|Q84TQ7 (Q84TQ7) GIA/RGA-like gibberellin ... 107 1e-23
>TC230189 similar to UP|Q9SCR0 (Q9SCR0) Scarecrow-like 7 (SCL7), partial
(25%)
Length = 973
Score = 245 bits (625), Expect = 4e-65
Identities = 130/160 (81%), Positives = 140/160 (87%), Gaps = 4/160 (2%)
Frame = +3
Query: 400 LDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNM 459
LDE ++V+ ALRLAKSLNP+IVTLGEYEAS+T RVGFV RF TAF YF+A FESLEPN+
Sbjct: 3 LDEPPSAVDTALRLAKSLNPRIVTLGEYEASVT-RVGFVNRFRTAFKYFSAVFESLEPNL 179
Query: 460 ALDSPERFQVESLLLGRRIDGVIG---VRERMEDKEQWKVLMENCGFESVGLSHYAISQA 516
A DSPERFQVESLLLGRRI VIG VRE MEDKEQW+VLME GFESV LSHYAISQA
Sbjct: 180 AADSPERFQVESLLLGRRIAAVIGPGAVRESMEDKEQWRVLMERAGFESVSLSHYAISQA 359
Query: 517 KILLWNYSYSSLYSLVESQ-PAFLSLAWKDVPLLTVSSWR 555
KILLWNYSYSSL+SLVES+ P FLSLAWKDVPLLTVSSWR
Sbjct: 360 KILLWNYSYSSLFSLVESKPPGFLSLAWKDVPLLTVSSWR 479
>BQ296629 similar to GP|17064924|gb SCARECROW gene regulator {Arabidopsis
thaliana}, partial (19%)
Length = 437
Score = 204 bits (520), Expect = 6e-53
Identities = 104/143 (72%), Positives = 118/143 (81%)
Frame = +1
Query: 226 PNQRVSFYFSQALTNKITAQSSIASSNSSSTTWEELTLSYKALNDACPYSKFAHLTANQA 285
P +RV FYF QAL+ K+ +S WEELTLSYKALNDACPYSKFAHLTANQA
Sbjct: 19 PPERVGFYFWQALSRKMWGDKEKMEPSS----WEELTLSYKALNDACPYSKFAHLTANQA 186
Query: 286 ILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSI 345
ILEATE ++NIHI+DFGIVQGIQWAALLQAFATR+SGKPN + ISGIPA++LG SP S+
Sbjct: 187 ILEATENASNIHILDFGIVQGIQWAALLQAFATRASGKPNKITISGIPAVSLGPSPGPSL 366
Query: 346 SATGNRLSEFAKLLGLNFEFTPI 368
SATGNRLS+FA+LL LNF FTPI
Sbjct: 367 SATGNRLSDFARLLDLNFVFTPI 435
>TC230188 similar to UP|Q8W4I8 (Q8W4I8) SCARECROW gene regulator, partial
(18%)
Length = 393
Score = 117 bits (294), Expect(2) = 6e-45
Identities = 59/68 (86%), Positives = 61/68 (88%), Gaps = 1/68 (1%)
Frame = +2
Query: 485 RERMEDKEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVES-QPAFLSLAW 543
RE MEDKEQW+VLME GFESV LSHYAISQAKILLWNYSYSSL+SLVES P FLSLAW
Sbjct: 188 RESMEDKEQWRVLMERAGFESVSLSHYAISQAKILLWNYSYSSLFSLVESTPPGFLSLAW 367
Query: 544 KDVPLLTV 551
KDVPLLTV
Sbjct: 368 KDVPLLTV 391
Score = 82.0 bits (201), Expect(2) = 6e-45
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = +1
Query: 434 RVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIG 483
R GFV RF+TAF YF+A FESLEPN+A DSPERFQVESLLLGRRI VIG
Sbjct: 19 RFGFVNRFKTAFKYFSAVFESLEPNLAADSPERFQVESLLLGRRIAAVIG 168
>TC204219 similar to UP|Q7Y1B6 (Q7Y1B6) GAI-like protein, partial (50%)
Length = 1208
Score = 171 bits (433), Expect = 8e-43
Identities = 111/297 (37%), Positives = 166/297 (55%), Gaps = 11/297 (3%)
Frame = +1
Query: 270 DACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRI 329
++CPY KFAH TANQAILEA + +H++DFG+ QG+QW AL+QA A R G P + R+
Sbjct: 22 ESCPYLKFAHFTANQAILEAFATAGKVHVIDFGLKQGMQWPALMQALALRPGGPP-TFRL 198
Query: 330 SGI-PAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTP-ILTPIELLDESSFCIQPDEA 387
+GI P T + + G +L++ A+ +G+ FEF + + LD I+P EA
Sbjct: 199 TGIGPPQPDNTDALQQV---GWKLAQLAQNIGVQFEFRGFVCNSLADLDPKMLEIRPGEA 369
Query: 388 LAVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNY 447
+AVN + +L+ +L SV+K L K + PKIVT+ E EA+ GF++RF A +Y
Sbjct: 370 VAVNSVFELHRML-ARPGSVDKVLDTVKKIKPKIVTIVEQEAN-HNGPGFLDRFTEALHY 543
Query: 448 FAAFFESLE---PNMALDSPER-FQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLM 498
+++ F+SLE + L SP + + L LGR+I V+ ER E QW+ +
Sbjct: 544 YSSLFDSLEGSSSSTGLGSPNQDLLMSELYLGRQICNVVANEGADRVERHETLSQWRGRL 723
Query: 499 ENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
++ GF+ V L A QA +LL ++ Y VE L L W PL+ S+W+
Sbjct: 724 DSAGFDPVHLGSNAFKQASMLLALFAGGDGYR-VEENNGCLMLGWHTRPLIATSAWK 891
>TC228139 similar to UP|Q8GVE1 (Q8GVE1) Chitin-inducible
gibberellin-responsive protein, partial (47%)
Length = 1497
Score = 168 bits (426), Expect = 5e-42
Identities = 116/294 (39%), Positives = 160/294 (53%), Gaps = 13/294 (4%)
Frame = +1
Query: 274 YSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIP 333
Y KF ++ AN AI +A ++IHI+DF I QG QW LLQA A R G P+ VRI+GI
Sbjct: 4 YLKFGYMAANGAIAQACRNEDHIHIIDFQIAQGTQWMTLLQALAARPGGAPH-VRITGID 180
Query: 334 AMALGTSPVSSISATGNRLSEFAKLLGLNFEF--TPILTP---IELLDESSFCIQPDEAL 388
+ + G RL+ ++ G+ EF P+ P E+LD I+P EAL
Sbjct: 181 DPVSKYARGDGLEVVGKRLALMSEKFGIPVEFHGVPVFAPNVTREMLD-----IRPGEAL 345
Query: 389 AVNFMLQLYNLLDEN---TNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAF 445
AVNF LQL++ DE+ +N + LRL +SL+PK+ TL E E++ T F RF
Sbjct: 346 AVNFPLQLHHTADESVHVSNPRDGLLRLVRSLSPKVTTLVEQESN-TNTTPFFNRFIETL 522
Query: 446 NYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGV--RERMEDKE---QWKVLMEN 500
+Y+ A FES++ + DS ER VE L R I +I +ER+E E +WK ++
Sbjct: 523 DYYLAIFESIDVTLPRDSKERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLKM 702
Query: 501 CGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 554
GF+ LS Y S + LL YS Y+LVE A L L WKD L++ S+W
Sbjct: 703 AGFQQCPLSSYVNSVIRSLL--MCYSEHYTLVEKDGAML-LGWKDRNLISASAW 855
>TC226166 similar to UP|O23724 (O23724) GAI protein, partial (70%)
Length = 1613
Score = 167 bits (424), Expect = 9e-42
Identities = 125/399 (31%), Positives = 199/399 (49%), Gaps = 9/399 (2%)
Frame = +1
Query: 166 PTPQRKNDNTTTETTSSFSSSTNP--LLKTLTEIASLIETQKPNQAIETLTHLN-KSISQ 222
P P+R + + S N L+ +L A +E A + + ++SQ
Sbjct: 34 PNPKRVKADESRRAVVVVDSQENGIRLVHSLMACAEAVENNNLAVAEALVKQIGFLAVSQ 213
Query: 223 NGNPNQRVSFYFSQALTNKITAQSSIASSNSSSTTWEELTLSYKALNDACPYSKFAHLTA 282
G ++V+ YF++AL +I + S S S L + + + CPY KFAH TA
Sbjct: 214 VG-AMRKVAIYFAEALARRIYRVFPLQHSLSDS-----LQIHFY---ETCPYLKFAHFTA 366
Query: 283 NQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPV 342
NQ ILEA +G N +H++DFGI QG+QW AL+QA A R+ G P R++GI A S
Sbjct: 367 NQVILEAFQGKNRVHVIDFGINQGMQWPALMQALAVRTGGPP-VFRLTGIGPPAADNS-- 537
Query: 343 SSISATGNRLSEFAKLLGLNFEFTP-ILTPIELLDESSFCIQPDEALAVNFMLQLYNLLD 401
+ G +L++ A+ + + FE+ + + LD S ++ DE++AVN + + + LL
Sbjct: 538 DHLQEVGWKLAQLAEEINVQFEYRGFVANSLADLDASMLDLREDESVAVNSVFEFHKLL- 714
Query: 402 ENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMAL 461
+VEK L + + + P+I+T+ E EA+ + FV+RF + +Y++ F+SLE +
Sbjct: 715 ARPGAVEKVLSVVRQIRPEILTVVEQEAN-HNGLSFVDRFTESLHYYSTLFDSLEGSPV- 888
Query: 462 DSPERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAISQA 516
+P + + LG++I V+ ER E QW+ + GF V L A QA
Sbjct: 889 -NPNDKAMSEVYLGKQICNVVACEGMDRVERHETLNQWRNRFGSTGFSPVHLGSNAYKQA 1065
Query: 517 KILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
+LL + Y VE L L W PL+ S W+
Sbjct: 1066SMLLSLFGGGDGYR-VEENNGCLMLGWHTRPLIATSVWQ 1179
>TC228546 similar to UP|Q8W584 (Q8W584) AT4g17230/dl4650c, partial (60%)
Length = 1493
Score = 161 bits (407), Expect = 8e-40
Identities = 114/352 (32%), Positives = 172/352 (48%), Gaps = 12/352 (3%)
Frame = +3
Query: 216 LNKSISQNGNPNQRVSFYFSQALTNKITAQSSIA--SSNSSSTTWEELTLSYKALNDACP 273
L K +S G+P QR+ Y + L ++ + SI + T +L L CP
Sbjct: 30 LAKMVSVGGDPIQRLGAYMLEGLRARLESSGSIIYKALKCEQPTSNDLMTYMHILYQICP 209
Query: 274 YSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIP 333
Y KFA+ +AN I EA + I I+DF I QG QW L+QA A+R G P V ++G+
Sbjct: 210 YWKFAYTSANAVIGEAMLNESRIRIIDFQIAQGTQWLLLIQALASRPGGPP-FVHVTGVD 386
Query: 334 AMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFM 393
+ + G RLS++AK G+ FEF L+ + IQP EAL VNF
Sbjct: 387 DSQSFHARGGGLHIVGKRLSDYAKSCGVPFEFHSAAMCGSELELENLVIQPGEALVVNFP 566
Query: 394 LQLYNLLDENT---NSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAA 450
L+++ DE+ N ++ LRL KSL+PK+VTL E E++ T F +RF +Y+ A
Sbjct: 567 FVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTS-PFFQRFVETLSYYTA 743
Query: 451 FFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR--ERMEDKE---QWKVLMENCGFES 505
FES++ + D +R E + R I ++ ER+E E +W+ GF
Sbjct: 744 MFESIDVALPRDDKQRINAEQHCVARDIVNMVACEGDERLERHELLGKWRSRFSMAGFAP 923
Query: 506 VGLSHYAISQAKILL--WNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
LS + + +L +N +Y ++ + L L WK + T S+WR
Sbjct: 924 CPLSSSVTAAVRNMLNEFNENYR-----LQHRDGALYLGWKSRAMCTSSAWR 1064
>TC227563 similar to PIR|E96542|E96542 scarecrow-like protein [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(71%)
Length = 1274
Score = 108 bits (269), Expect(2) = 3e-39
Identities = 78/240 (32%), Positives = 114/240 (47%), Gaps = 8/240 (3%)
Frame = +2
Query: 324 PNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQ 383
P +RI+G + + G RLS A+ + FEF I ++ +Q
Sbjct: 449 PPKIRITGFDDSTSAYAREGGLEIVGARLSRLAQSYNVPFEFHAIRAAPTEVELKDLALQ 628
Query: 384 PDEALAVNFMLQLYNLLDE---NTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVER 440
P EA+AVNF + L+++ DE + N ++ +RLAK L+PKIVTL E E S T + F R
Sbjct: 629 PGEAIAVNFAMMLHHVPDECVDSRNHRDRLVRLAKCLSPKIVTLVEQE-SHTNNLPFFPR 805
Query: 441 FETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWK 495
F NY+ A FES++ + + ER VE L R + +I ER E ++W+
Sbjct: 806 FVETMNYYLAIFESIDVALPREHKERINVEQHCLAREVVNLIACEGAERVERHELLKKWR 985
Query: 496 VLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
GF L+ + K L SY Y+L E A L L W + L+T +WR
Sbjct: 986 SRFTMAGFTPYPLNSFVTCSIKNL--QQSYQGHYTLEERDGA-LCLGWMNQVLITSCAWR 1156
Score = 72.8 bits (177), Expect(2) = 3e-39
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = +3
Query: 213 LTHLNKSISQNGNPNQRVSFYFSQALTNKITAQSSIASS--NSSSTTWEELTLSYKALND 270
++ L K +S +GNP QR+ Y +AL ++ + S T EL L +
Sbjct: 111 MSELRKMVSVSGNPIQRLGAYMLEALVARLASSGSTIYKVLKCKEPTGSELLSHMHLLYE 290
Query: 271 ACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKP 324
CPY KF +++AN AI E + + +HI+DF I QGIQW +L+ + ++ P
Sbjct: 291 ICPYLKFGYMSANGAIAEVMKEESEVHIIDFQINQGIQWVSLIPSCCWQTWSTP 452
>TC227564 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-like
(Phytochrome A signal transduction 1 protein), partial
(53%)
Length = 1107
Score = 142 bits (359), Expect = 3e-34
Identities = 97/268 (36%), Positives = 137/268 (50%), Gaps = 8/268 (2%)
Frame = +3
Query: 296 IHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEF 355
+HIVDF I QG QW +L+QA A R G P +RISG+ + + G RLS
Sbjct: 6 VHIVDFQIGQGTQWVSLIQALARRPVGPPK-IRISGVDDSYSAYARRGGLDIVGKRLSAL 182
Query: 356 AKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLDENTNS---VEKALR 412
A+ + FEF + P+ + ++P EA+AVNF + L+++ DE+ NS ++ LR
Sbjct: 183 AQSCHVPFEFNAVRVPVTEVQLEDLELRPYEAVAVNFAISLHHVPDESVNSHNHRDRLLR 362
Query: 413 LAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESL 472
LAK L+PK+VTL E E S T F++RF NY+ A FES++ + + ER VE
Sbjct: 363 LAKQLSPKVVTLVEQEFS-TNNAPFLQRFVETMNYYLAVFESIDTVLPREHKERINVEQH 539
Query: 473 LLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSS 527
L R + +I ER E +W++ GF LS S K LL SY
Sbjct: 540 CLAREVVNLIACEGEERVERHELLNKWRMRFTKAGFTPYPLSSVINSSIKDLL--QSYHG 713
Query: 528 LYSLVESQPAFLSLAWKDVPLLTVSSWR 555
Y+L E A L L W + L+ +WR
Sbjct: 714 HYTLEERDGA-LFLGWMNQVLVASCAWR 794
>TC209743 similar to PIR|E86347|E86347 scarecrow-like 1 protein F24J8.8 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(47%)
Length = 1078
Score = 132 bits (332), Expect = 4e-31
Identities = 86/282 (30%), Positives = 139/282 (48%), Gaps = 8/282 (2%)
Frame = +1
Query: 282 ANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSP 341
AN AI E +HI+DF I QG Q+ L+Q A+ G+P VR++ +
Sbjct: 13 ANGAIAEVVRDEKKVHIIDFDISQGTQYITLIQTLASMP-GRPPHVRLTAVDDPESVQRS 189
Query: 342 VSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLD 401
+ I+ G RL + A+ L L FEF + + + +S +P EAL VNF QL+++ D
Sbjct: 190 IGGINIIGQRLEKLAEELRLPFEFRAVASRTSNVTQSMLNCRPGEALVVNFAFQLHHMRD 369
Query: 402 ENTNSV---EKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPN 458
E ++V ++ LR+ KSLNPKIVT+ E + + T F+ RF +NY++A F +L+
Sbjct: 370 ETVSTVNERDQLLRMVKSLNPKIVTVVEQDMNTNTS-PFLPRFIETYNYYSAVFNTLDAT 546
Query: 459 MALDSPERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAI 513
+ +S +R VE L + I ++ ER E +W+ + GF +S
Sbjct: 547 LPRESQDRMNVERQCLAKDIVNIVACEGEERIERYEVAGKWRARLSMAGFTPSPMSTNVR 726
Query: 514 SQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
+ L+ Y + + E L W+D L+ S+W+
Sbjct: 727 EAIRNLIIK-QYCDKFKIKEEMGG-LHFGWEDKNLIVASAWK 846
>TC219179 similar to UP|Q9LDL7 (Q9LDL7) SCARECROW gene regulator-like
(Phytochrome A signal transduction 1 protein), partial
(52%)
Length = 1025
Score = 132 bits (331), Expect = 5e-31
Identities = 94/270 (34%), Positives = 135/270 (49%), Gaps = 8/270 (2%)
Frame = +3
Query: 294 NNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLS 353
+ +HI+DF I QG QW L+QAFA R G P+ +RI+GI + + G RLS
Sbjct: 9 DRVHIIDFQIGQGSQWITLIQAFAARPGGPPH-IRITGIDDSTSAYARGGGLHIVGRRLS 185
Query: 354 EFAKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLDENT---NSVEKA 410
+ A+ + FEF + + ++P EALAVNF L+++ DE+ N ++
Sbjct: 186 KLAEHFKVPFEFHAAAISGFDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRL 365
Query: 411 LRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVE 470
LRL +SL+PK+VTL E E++ T F RF NY+ A FES++ + + ER VE
Sbjct: 366 LRLVRSLSPKVVTLVEQESN-TNTAAFFPRFLETLNYYTAMFESIDVTLPREHKERINVE 542
Query: 471 SLLLGRRIDGVIGVR--ERMEDKE---QWKVLMENCGFESVGLSHYAISQAKILLWNYSY 525
L R + +I ER+E E +W+ GF LS K LL N Y
Sbjct: 543 QHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLEN--Y 716
Query: 526 SSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
S Y L E A L L W + L+ +W+
Sbjct: 717 SDRYRLEERDGA-LYLGWMNRDLVASCAWK 803
>TC226165 GAI1 [Glycine max]
Length = 1313
Score = 129 bits (324), Expect = 3e-30
Identities = 103/354 (29%), Positives = 168/354 (47%), Gaps = 7/354 (1%)
Frame = +3
Query: 103 DPHSTTFRFSDFDSDDWMDTLMSAADSHSDFHLNPFSSCPTRLSPQPDLLLPATAPLQI- 161
D + ++ D +W+ T++S D S P + S D L A I
Sbjct: 309 DLSNDAVHYNPSDISNWLQTMLSNFDPLP-------SEEPEKDSASSDYDLKAIPGKAIY 467
Query: 162 ---PTQPPTPQRKNDNTTTETTSSFSSSTNP--LLKTLTEIASLIETQKPNQAIETLTHL 216
P P+R + +T N L+ +L A +E A + +
Sbjct: 468 GGGSDALPNPKRVRTDESTRAVVVVDLQENGIRLVHSLMACAEAVENNNLAVAEALVKQI 647
Query: 217 NKSISQNGNPNQRVSFYFSQALTNKITAQSSIASSNSSSTTWEELTLSYKALNDACPYSK 276
++V+ YF++AL +I S S S L + + + CPY K
Sbjct: 648 GFLALSQVGAMRKVATYFAEALARRIYRVFPQQHSLSDS-----LQIHFY---ETCPYLK 803
Query: 277 FAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMA 336
FAH TANQAILEA +G N +H++DFGI QG+QW AL+QA A R+ G P R++GI A
Sbjct: 804 FAHFTANQAILEAFQGKNRVHVIDFGINQGMQWPALMQALALRNDGPP-VFRLTGIGPPA 980
Query: 337 LGTSPVSSISATGNRLSEFAKLLGLNFEFTP-ILTPIELLDESSFCIQPDEALAVNFMLQ 395
S + G +L++ A+ + + FE+ + + LD S ++ DE++AVN + +
Sbjct: 981 ADNS--DHLQEVGWKLAQLAERIHVQFEYRGFVANSLADLDASMLDLREDESVAVNSVFE 1154
Query: 396 LYNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFA 449
+ LL +VEK L + + + P+I+T+ E EA+ + FV+RF + +Y++
Sbjct: 1155FHKLL-ARPGAVEKVLSVVRQIRPEILTVVEQEAN-HNGLSFVDRFTESLHYYS 1310
>CO981442
Length = 791
Score = 126 bits (316), Expect = 3e-29
Identities = 86/257 (33%), Positives = 125/257 (48%), Gaps = 8/257 (3%)
Frame = -2
Query: 296 IHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEF 355
IHI+DFGI G +W AL+ + RS G P +RI+GI G P + TG RL+ F
Sbjct: 769 IHIIDFGIRYGFKWPALISRLSRRSGGPPK-LRITGIDVPQPGLRPQERVLETGRRLANF 593
Query: 356 AKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLDEN---TNSVEKALR 412
K + FEF I + + I+P+E +AVN + Q +LLDE NS + LR
Sbjct: 592 CKRFNVPFEFNAIAQRWDTIRVEDLKIEPNEFVAVNCLFQFEHLLDETVVLNNSRDAVLR 413
Query: 413 LAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESL 472
L K+ NP I G S FV RF A ++ A F+ L+ N+A P R E
Sbjct: 412 LIKNANPDIFVHGIVNGSYDVPF-FVSRFREALFHYTALFDMLDTNVARQDPMRLMFEKE 236
Query: 473 LLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSS 527
L GR I +I ER + +QW++ GF + L H I + K L + ++++
Sbjct: 235 LFGREIVNIIACEGFERVERPQTYKQWQLRNMRNGFRLLPLDHRIIGKLKDRLRDDAHNN 56
Query: 528 LYSLVESQPAFLSLAWK 544
+ L+E ++ WK
Sbjct: 55 NF-LLEVDGDWVLQGWK 8
>TC231668 homologue to UP|Q9AVK4 (Q9AVK4) SCARECROW, partial (28%)
Length = 706
Score = 125 bits (315), Expect = 4e-29
Identities = 89/234 (38%), Positives = 129/234 (55%), Gaps = 5/234 (2%)
Frame = +3
Query: 327 VRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQPDE 386
VR++G LGTS + ++ ATG RLS+FA LGL FEF P+ + LD + E
Sbjct: 18 VRLTG-----LGTS-MEALEATGKRLSDFANKLGLPFEFFPVAEKVGNLDPERLNVSKTE 179
Query: 387 ALAVNFML-QLYNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAF 445
A+AV+++ LY++ +TN+ L L + L PK+VT+ E + S T F+ RF A
Sbjct: 180 AVAVHWLQHSLYDVTGSDTNT----LWLLQRLAPKVVTVVEQDLSNTG--SFLGRFVEAI 341
Query: 446 NYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGV----RERMEDKEQWKVLMENC 501
+Y++A F+SL + +S ER VE LL R I V+ V R W+ ++ C
Sbjct: 342 HYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQC 521
Query: 502 GFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
GF + L+ A +QA +LL + S Y+LVE L L WKD+ LLT S+WR
Sbjct: 522 GFRGISLAGNAATQASLLLGMFP-SEGYTLVEDN-GILKLGWKDLCLLTASAWR 677
>TC217781 similar to UP|O81316 (O81316) F6N15.20 protein (Scarecrow-like 6)
(SCL6) (AT4g00150/F6N15_20), partial (42%)
Length = 1762
Score = 123 bits (309), Expect = 2e-28
Identities = 113/408 (27%), Positives = 196/408 (47%), Gaps = 11/408 (2%)
Frame = +1
Query: 159 LQIPTQPPTPQRKNDNTTTETTSSFSSSTNPLLKTLTEIASLIETQKPNQAIETLTHLNK 218
LQ P+ P++K N+ ++ ++ + + L + A LI+ A L LN
Sbjct: 325 LQRPSMVVAPKQKMVNSGSQDLATHQLQ-QAITEQLFKAAELIDAGNLELAHGILARLNH 501
Query: 219 SISQNGNPNQRVSFYFSQALTNKITAQSSIASSNSSSTTWEELTLSYKALNDACPYSKFA 278
+S G P QR +FYF +AL + ++ +S S T +YK+ ++ P +FA
Sbjct: 502 QLSPIGKPFQRAAFYFKEALQLLLHPNANNSSFTFSPTGLLLKIGAYKSFSEISPVLQFA 681
Query: 279 HLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALG 338
+ T NQA+LEA EG + IHI+DF I G QW++ +Q A R+ P ++I+ ++
Sbjct: 682 NFTCNQALLEAVEGFDRIHIIDFDIGLGGQWSSFMQELALRNGSAP-ELKITAF--VSPS 852
Query: 339 TSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSF--CIQPDEALAVNFMLQL 396
+S + L ++A L ++FE + +E L+ +S+ ++ EA+ VN +
Sbjct: 853 HHDEIELSFSQESLKQYAGELHMSFELE--ILSLESLNSASWPQPLRDCEAVVVNMPIGS 1026
Query: 397 YNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLE 456
++ + + LR K L PKIV + T F + A ++ ESL+
Sbjct: 1027FS---NYPSYLPLVLRFVKQLMPKIVVTLDRSCD-RTDAPFPQHLIFALQSYSGLLESLD 1194
Query: 457 -----PNMALDSPERF----QVESLLLGRRIDGVIGVRERMEDKEQWKVLMENCGFESVG 507
P++ L E++ +E L+LGR G++ER WK L+ + GF +
Sbjct: 1195AVNVHPDV-LQMIEKYYLQPSMEKLVLGRH-----GLQER---ALPWKNLLLSSGFSPLT 1347
Query: 508 LSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
S++ SQA+ L+ + VE + + L L W+ L++VS+WR
Sbjct: 1348FSNFTESQAECLVQRTPSKGFH--VEKRQSSLVLCWQRKDLISVSTWR 1485
>TC220187 similar to PIR|E86347|E86347 scarecrow-like 1 protein F24J8.8 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(39%)
Length = 810
Score = 120 bits (301), Expect = 2e-27
Identities = 77/222 (34%), Positives = 114/222 (50%), Gaps = 8/222 (3%)
Frame = +3
Query: 342 VSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLD 401
V + G RL + A+ LGL FEF + + ++ S PDEAL VNF QL+++ D
Sbjct: 36 VGGLQNIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCSPDEALVVNFAFQLHHMPD 215
Query: 402 EN---TNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPN 458
E+ N ++ LRL KSLNPK+VT+ E + + T F+ RF A+NY++A FESL+
Sbjct: 216 ESVSTANERDQLLRLVKSLNPKLVTVVEQDVN-TNTTPFLPRFVEAYNYYSAVFESLDAT 392
Query: 459 MALDSPERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAI 513
+ +S +R VE L R I V+ ER E +W+ M GF S +S
Sbjct: 393 LPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVT 572
Query: 514 SQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
+ + L+ Y Y + E A L W+D L+ S+W+
Sbjct: 573 DEIRKLI-KTVYCDRYKIKEEMGA-LHFGWEDKNLIVASAWK 692
>TC226882 similar to UP|O81316 (O81316) F6N15.20 protein (Scarecrow-like 6)
(SCL6) (AT4g00150/F6N15_20), partial (32%)
Length = 1423
Score = 115 bits (289), Expect = 4e-26
Identities = 99/347 (28%), Positives = 170/347 (48%), Gaps = 11/347 (3%)
Frame = +3
Query: 220 ISQNGNPNQRVSFYFSQALTNKITAQSSIASSNSSSTTWEELTLSYKALNDACPYSKFAH 279
+S G P QR +FY +AL + + + + + S + ++ +YK+ ++ P +FA+
Sbjct: 6 LSPIGRPFQRAAFYMKEALMSLLHSNAHSFMAFSPISFIFKIG-AYKSFSEISPVLQFAN 182
Query: 280 LTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGT 339
T NQA++EA E S+ IH++DF I G+QW++ +Q A RSSG P S++++ I ++ T
Sbjct: 183 FTCNQALIEAVERSDRIHVIDFDIGFGVQWSSFMQEIALRSSGAP-SLKVTAI--VSPST 353
Query: 340 SPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQ----PDEALAVNFMLQ 395
++ T L ++AK + ++FEF + IE L+ S + +EA+ VN +
Sbjct: 354 CDEVELNFTRENLIQYAKDINVSFEFN--VLSIESLNSPSCPLLGKFFDNEAIVVNMPVS 527
Query: 396 LYNLLDENTNSVEKALRLAKSLNPKIVT-----LGEYEASLTTRVGFVERFETAFNYFAA 450
+ SV L K L PK+V + + L T V V ++A
Sbjct: 528 SFTNYPSLFPSV---LHFVKQLRPKVVVTLDRICDQMDVPLPTNVVHV------LQCYSA 680
Query: 451 FFESLEP-NMALDSPERFQVESLLLGRRIDGVI-GVRERMEDKEQWKVLMENCGFESVGL 508
ESL+ N+ LD ++ +E + I +I G E W+ L GF
Sbjct: 681 LLESLDAVNVNLDVLQK--IERHFIQPAIKKIILGHHHFQEKLPPWRNLFMQSGFSPFTF 854
Query: 509 SHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR 555
S++ +QA+ L+ + VE +P+ L L W+ L++VS+WR
Sbjct: 855 SNFTEAQAECLVQRAPVRGFH--VERKPSSLVLCWQKKELISVSTWR 989
>TC220762 similar to UP|Q6S5L6 (Q6S5L6) GAI protein, partial (27%)
Length = 725
Score = 115 bits (288), Expect = 5e-26
Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 1/196 (0%)
Frame = +1
Query: 213 LTHLNKSISQNGNPNQRVSFYFSQALTNKITAQSSIASSNSSSTTWEELTLSYKALNDAC 272
L H+N +I +V+ YF AL +I Q + +SSS +E+ L Y +AC
Sbjct: 136 LAHVNTNIGIG-----KVAGYFIDALRRRILGQGVFQTLSSSSYPYEDNVL-YHHYYEAC 297
Query: 273 PYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGI 332
PY KFAH TANQAILEA G + +H++DF ++QG+QW AL+QA A R G P +R++GI
Sbjct: 298 PYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPP-LLRLTGI 474
Query: 333 PAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILT-PIELLDESSFCIQPDEALAVN 391
+ + ++ G RL+E A+ + + F F + +E + + P+EA+AVN
Sbjct: 475 GPPS--SDNRDTLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVNPNEAVAVN 648
Query: 392 FMLQLYNLLDENTNSV 407
++QL+ LL +++ +
Sbjct: 649 SIMQLHRLLASDSDPI 696
>TC229255 similar to UP|Q7X9T5 (Q7X9T5) SCARECROW-like protein, partial (37%)
Length = 1561
Score = 112 bits (281), Expect(2) = 5e-26
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 7/285 (2%)
Frame = +1
Query: 209 AIETLTHLNKSISQNGNPNQRVSFYFSQALTNKITAQSSIASSNSSSTTWEELTLSYKAL 268
A + L+ + + S G+ QR++ YF+ L ++ A + + + TT ++ +YK
Sbjct: 28 ANDLLSQIRQHSSAFGDGLQRLAHYFANGLQTRLAAGTP-SYTPLEGTTSADMLKAYKLY 204
Query: 269 NDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVR 328
+ P + + A + I+ E ++HI+DFGI G QW L++ + R G P +R
Sbjct: 205 VTSSPLQRLTNYLATKTIVSLVENEGSVHIIDFGICYGFQWPCLIKKLSERHGGPPR-LR 381
Query: 329 ISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQPDEAL 388
I+GI G P + TG RL+ + K + FE+ + E + + I +E
Sbjct: 382 ITGIELPQPGFRPAERVEETGRRLANYCKKFKVPFEYNCLAQKWETIKLADLKIDRNEVT 561
Query: 389 AVNFMLQLYNLLDENT---NSVEKALRLAKSLNPKI----VTLGEYEASLTTRVGFVERF 441
V+ +L NL DE + + L+L + +NP + V G Y A F+ RF
Sbjct: 562 VVSCFYRLKNLPDETVDVKSPRDAVLKLIRRINPNMFIHGVVNGTYNAPF-----FLTRF 726
Query: 442 ETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVRE 486
A +F++ F+ E N+ + PER L R+ G+ G+R+
Sbjct: 727 REALYHFSSLFDMFEANVPREDPERVMPSML---*RVKGLRGLRD 852
Score = 23.5 bits (49), Expect(2) = 5e-26
Identities = 10/32 (31%), Positives = 16/32 (49%)
Frame = +3
Query: 486 ERMEDKEQWKVLMENCGFESVGLSHYAISQAK 517
ER E +QW+V + GF+ V ++ K
Sbjct: 846 ERPETYKQWQVRNQRAGFKQVRFDPLLVNDEK 941
>TC204215 similar to UP|Q84TQ7 (Q84TQ7) GIA/RGA-like gibberellin response
modulator, partial (45%)
Length = 1589
Score = 107 bits (268), Expect = 1e-23
Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 33/266 (12%)
Frame = +1
Query: 165 PPTPQRKNDNTTT----ETTSSFSSSTNP---------------------------LLKT 193
PP PQ N+N ET ++ + P L+ T
Sbjct: 565 PPPPQDNNNNNNNLDEIETANNINKRLKPSPVESADSASEPTRTVLLVDHQEAGVRLVHT 744
Query: 194 LTEIASLIETQKPNQAIETLTHLNKSISQNGNPNQRVSFYFSQALTNKITAQSSIASSNS 253
L A ++ + A + H+ + ++V+ YF+QAL +I + +S
Sbjct: 745 LLACAEAVQQENLKLADALVKHVGILAASQAGAMRKVASYFAQALARRIYGIFPEETLDS 924
Query: 254 SSTTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALL 313
S + + + ++CPY KFAH TANQAILEA + +H++DFG+ QG+QW AL+
Sbjct: 925 SFSD-----VLHMHFYESCPYLKFAHFTANQAILEAFATAGRVHVIDFGLRQGMQWPALM 1089
Query: 314 QAFATRSSGKPNSVRISGI-PAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTP-ILTP 371
QA A R G P + R++GI P T + + G +L++ A+ +G+ FEF +
Sbjct: 1090QALALRPGGPP-TFRLTGIGPPQPDNTDALQQV---GWKLAQLAQNIGVQFEFRGFVCNS 1257
Query: 372 IELLDESSFCIQPDEALAVNFMLQLY 397
+ LD I+P EA+AVN + +L+
Sbjct: 1258LADLDPKMLEIRPGEAVAVNSVFELH 1335
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.315 0.129 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,699,981
Number of Sequences: 63676
Number of extensions: 459770
Number of successful extensions: 9118
Number of sequences better than 10.0: 355
Number of HSP's better than 10.0 without gapping: 6225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7822
length of query: 555
length of database: 12,639,632
effective HSP length: 102
effective length of query: 453
effective length of database: 6,144,680
effective search space: 2783540040
effective search space used: 2783540040
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC142222.7