Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141436.6 - phase: 0 
         (1173 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BU550352                                                              114  5e-34
TC209754                                                              133  5e-31
BF424528                                                              127  4e-29
TC215070 similar to UP|Q40336 (Q40336) Proline-rich cell wall pr...    37  0.013
BM270367 similar to PIR|S78452|S784 POU-domain protein rdc-1 - h...    38  0.030
TC208407 similar to UP|Q84KA9 (Q84KA9) RING/C3HC4/PHD zinc finge...    37  0.051
TC210397                                                               37  0.051
TC206525 weakly similar to UP|Q41042 (Q41042) Pisum sativum L. (...    37  0.051
TC206176 weakly similar to UP|Q8LPA7 (Q8LPA7) Cold shock protein...    37  0.066
TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabin...    30  0.076
TC204100 homologue to UP|Q93WA5 (Q93WA5) Ribosomal protein L32, ...    35  0.15
TC231630 weakly similar to UP|Q7PR65 (Q7PR65) ENSANGP00000016899...    35  0.15
TC206524 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr...    35  0.15
TC209977 UP|Q9HF30 (Q9HF30) Pheromone MFalpha1D (Fragment), part...    35  0.25
TC232709 weakly similar to UP|Q9LZJ6 (Q9LZJ6) RING-H2 zinc finge...    35  0.25
BE059711                                                               34  0.33
TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partia...    34  0.33
TC229486 similar to UP|Q76KV2 (Q76KV2) DNA binding with one fing...    34  0.33
TC205952                                                               34  0.33
TC230110 similar to UP|Q8LDR0 (Q8LDR0) Zinc finger protein OBP4-...    34  0.43

>BU550352 
          Length = 531

 Score =  114 bits (284), Expect(2) = 5e-34
 Identities = 56/146 (38%), Positives = 72/146 (48%), Gaps = 7/146 (4%)
 Frame = -1

Query: 526 VECYKTTENQKFTCQKPCGAKKNCGRHRCSEKCCPLSGPNNGLTTPDWDPHFCSMLCGKK 585
           V CY     Q   C++ C   ++CGRH C  +CC            D D   CS +CG+K
Sbjct: 402 VPCY-----QDLACERKCQRMRDCGRHACKRRCC------------DGDCPPCSEICGRK 274

Query: 586 LRCGQHVCETLCHSGHCPPCLETIFTDLACACGMTSIPPPLPCGT----MPPLCQLPCSV 641
           LRC  H C + CH G C PC   I   ++CACG T     +PCGT     PP C  PC +
Sbjct: 273 LRCKNHKCPSPCHRGPCAPC--PIMVTISCACGETRF--EVPCGTEMDNKPPRCPKPCPI 106

Query: 642 PQPCGHSGS---HSCHFGDCPPCSVP 664
              C H+ +   H CH+G C PC +P
Sbjct: 105 TPLCRHASNIKPHKCHYGACHPCRLP 28



 Score = 80.1 bits (196), Expect(2) = 2e-16
 Identities = 48/164 (29%), Positives = 64/164 (38%), Gaps = 4/164 (2%)
 Frame = -1

Query: 357 DLTCGQRCDKLLDCGRHHCENACHVGPCDPCQVLIEASCFCSKMTQVLFCGEMAMKGEFE 416
           DL C ++C ++ DCGRH C+  C  G C PC  +                          
Sbjct: 387 DLACERKCQRMRDCGRHACKRRCCDGDCPPCSEI-------------------------- 286

Query: 417 AEGGVFSCGSNCGNVLGCSNHICREVCHPGSCGECEFLPSRVKACCCGKTKLEDERKSCV 476
                      CG  L C NH C   CH G C  C  + +   +C CG+T+ E    + +
Sbjct: 285 -----------CGRKLRCKNHKCPSPCHRGPCAPCPIMVT--ISCACGETRFEVPCGTEM 145

Query: 477 D-PIPTCSKVCSKTLRCGVHACK---ETCHVGECPPCKVLISQK 516
           D   P C K C  T  C  HA       CH G C PC++   Q+
Sbjct: 144 DNKPPRCPKPCPITPLCR-HASNIKPHKCHYGACHPCRLPCRQR 16



 Score = 77.0 bits (188), Expect(2) = 7e-22
 Identities = 38/143 (26%), Positives = 51/143 (35%), Gaps = 6/143 (4%)
 Frame = -1

Query: 423 SCGSNCGNVLGCSNHICREVCHPGSCGECEFLPSRVKACCCGKTKLEDERKSCVDPIPTC 482
           +C   C  +  C  H C+  C  G C                               P C
Sbjct: 381 ACERKCQRMRDCGRHACKRRCCDGDC-------------------------------PPC 295

Query: 483 SKVCSKTLRCGVHACKETCHVGECPPCKVLISQKCRCGSTSRTVECYKTTENQKFTCQKP 542
           S++C + LRC  H C   CH G C PC ++++  C CG T   V C    +N+   C KP
Sbjct: 294 SEICGRKLRCKNHKCPSPCHRGPCAPCPIMVTISCACGETRFEVPCGTEMDNKPPRCPKP 115

Query: 543 CGAKKNCGR------HRCSEKCC 559
           C     C        H+C    C
Sbjct: 114 CPITPLCRHASNIKPHKCHYGAC 46



 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 38/103 (36%), Positives = 46/103 (43%)
 Frame = -1

Query: 679 IPCGSNNIKCNNPCGRTRQCGLHACGRSCHSPPCDILPGIVKGLRAACGQTCGAPRSGCR 738
           +PC   ++ C   C R R CG HAC R C    CD       G    C + CG       
Sbjct: 402 VPC-YQDLACERKCQRMRDCGRHACKRRC----CD-------GDCPPCSEICGRKLRCKN 259

Query: 739 HMCMALCHPGCPCPDARCEFPVTITCSCGRISANVPCDVGGNN 781
           H C + CH G PC  A C   VTI+C+CG     VPC    +N
Sbjct: 258 HKCPSPCHRG-PC--APCPIMVTISCACGETRFEVPCGTEMDN 139



 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
 Frame = -1

Query: 338 RLCPCGKKRIATRCSDRQSDLTCGQRCDKLLDCGRHHCENACHVGPCDPCQVLIEASCFC 397
           R+  CG+     RC D      C + C + L C  H C + CH GPC PC +++  SC C
Sbjct: 360 RMRDCGRHACKRRCCDGDCP-PCSEICGRKLRCKNHKCPSPCHRGPCAPCPIMVTISCAC 184

Query: 398 SKMTQVLFCGEMAMKGEFEAEGGVFSCGSNCGNVLGC--SNHICREVCHPGSCGECEFLP 455
            +    + CG        E +     C   C     C  +++I    CH G+C  C  LP
Sbjct: 183 GETRFEVPCGT-------EMDNKPPRCPKPCPITPLCRHASNIKPHKCHYGACHPCR-LP 28

Query: 456 SR 457
            R
Sbjct: 27  CR 22



 Score = 59.3 bits (142), Expect(2) = 3e-10
 Identities = 43/166 (25%), Positives = 53/166 (31%), Gaps = 7/166 (4%)
 Frame = -1

Query: 554 CSEKCCPLSGPNNGLTTPDWDPHFCSMLCGKKLRCGQHVCETLCHSGHCPPCLETIFTDL 613
           C E+   L  P      P +    C   C +   CG+H C+  C  G CPPC E     L
Sbjct: 450 CCEEVMSLWQPQER**VPCYQDLACERKCQRMRDCGRHACKRRCCDGDCPPCSEICGRKL 271

Query: 614 ACACGMTSIPPPLPCGTMPPLCQLPCSVPQPCGHSGSHSCHFGDCPPCSVPVSKECVGGH 673
            C                               H     CH G C PC + V+  C  G 
Sbjct: 270 RCK-----------------------------NHKCPSPCHRGPCAPCPIMVTISCACGE 178

Query: 674 VILRNIPCG----SNNIKCNNPCGRTRQCGLHACG---RSCHSPPC 712
                +PCG    +   +C  PC  T  C  HA       CH   C
Sbjct: 177 TRF-EVPCGTEMDNKPPRCPKPCPITPLC-RHASNIKPHKCHYGAC 46



 Score = 50.4 bits (119), Expect(2) = 5e-34
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = -2

Query: 486 CSKTLRCGVHACKETCHVGEC-PPCKVLISQKCRCGSTSR 524
           C K L CG H C E CH G+C   C+V++ + CRCGS  +
Sbjct: 530 CDKMLPCGYHRCPERCHRGQCVETCRVVVKKSCRCGSLKK 411



 Score = 47.8 bits (112), Expect(2) = 2e-09
 Identities = 33/117 (28%), Positives = 40/117 (33%), Gaps = 6/117 (5%)
 Frame = -1

Query: 635 CQLPCSVPQPCG-HSGSHSCHFGDCPPCSVPVSKECVGGHVILRNIPCGSNNIKCNNPCG 693
           C+  C   + CG H+    C  GDCPPCS                             CG
Sbjct: 378 CERKCQRMRDCGRHACKRRCCDGDCPPCS---------------------------EICG 280

Query: 694 RTRQCGLHACGRSCHSPPCDILPGIVKGLRAACGQT-----CGAPRSGCRHMCMALC 745
           R  +C  H C   CH  PC   P I+  +  ACG+T     CG         C   C
Sbjct: 279 RKLRCKNHKCPSPCHRGPCAPCP-IMVTISCACGETRFEVPCGTEMDNKPPRCPKPC 112



 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 30/104 (28%), Positives = 37/104 (34%), Gaps = 6/104 (5%)
 Frame = -1

Query: 292 CGEPCGKPLEKEVFVTEERKDELCPHACVLQCHPGPCPPCKAFAPPRLCPCGKKRIATRC 351
           C E CG+ L  +             H C   CH GPC PC        C CG+ R    C
Sbjct: 297 CSEICGRKLRCK------------NHKCPSPCHRGPCAPCPIMVTIS-CACGETRFEVPC 157

Query: 352 SDRQSDL--TCGQRCDKLLDCGRHHCEN----ACHVGPCDPCQV 389
                +    C + C     C   H  N     CH G C PC++
Sbjct: 156 GTEMDNKPPRCPKPCPITPLC--RHASNIKPHKCHYGACHPCRL 31



 Score = 46.6 bits (109), Expect(2) = 7e-22
 Identities = 17/38 (44%), Positives = 24/38 (62%), Gaps = 1/38 (2%)
 Frame = -2

Query: 364 CDKLLDCGRHHCENACHVGPC-DPCQVLIEASCFCSKM 400
           CDK+L CG H C   CH G C + C+V+++ SC C  +
Sbjct: 530 CDKMLPCGYHRCPERCHRGQCVETCRVVVKKSCRCGSL 417



 Score = 34.3 bits (77), Expect = 0.33
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 428 CGNVLGCSNHICREVCHPGSCGE-CEFLPSRVKACCCGKTK 467
           C  +L C  H C E CH G C E C  +    K+C CG  K
Sbjct: 530 CDKMLPCGYHRCPERCHRGQCVETCRVVVK--KSCRCGSLK 414



 Score = 33.9 bits (76), Expect(2) = 2e-09
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -2

Query: 582 CGKKLRCGQHVCETLCHSGHCPPCLET--IFTDLACACG 618
           C K L CG H C   CH G    C+ET  +    +C CG
Sbjct: 530 CDKMLPCGYHRCPERCHRGQ---CVETCRVVVKKSCRCG 423



 Score = 25.0 bits (53), Expect(2) = 2e-16
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = -2

Query: 312 DELCP---HACVLQCHPGPCPPCKAFAPPRLCPCGKKRIATR 350
           D++ P   H C  +CH G C         + C CG  +  +R
Sbjct: 527 DKMLPCGYHRCPERCHRGQCVETCRVVVKKSCRCGSLKKDSR 402



 Score = 24.6 bits (52), Expect(2) = 3e-10
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 543 CGAKKNCGRHRCSEKC 558
           C     CG HRC E+C
Sbjct: 530 CDKMLPCGYHRCPERC 483


>TC209754 
          Length = 587

 Score =  133 bits (334), Expect = 5e-31
 Identities = 79/151 (52%), Positives = 98/151 (64%), Gaps = 12/151 (7%)
 Frame = +3

Query: 1035 QNAGASAASSVTSAWG-------GTKEGALRSNPWKKAAVLDPGWKEDSWGDEQWTTAGD 1087
            Q +GAS ASS     G       G    AL+SNPWKK  + +PGW+ED+WGDE+W T   
Sbjct: 15   QMSGASVASSXYQMPGEDLGQ*KGGALAALKSNPWKKDVIQEPGWREDAWGDEEWATG-- 188

Query: 1088 SANIQPSALKKEAPIPASLNPWNVLNHESSSSSSPATVIRSVASGKQTESGNVSTKVEPS 1147
            SAN++    KKEA I AS+NPW+VLN ESSSSSS A  I+   S K +ES +V TK+EP 
Sbjct: 189  SANVKLPIQKKEARISASVNPWSVLNQESSSSSSVA-AIKIDGSRKHSES-SVITKLEPR 362

Query: 1148 AGGAD-----GGNSDATEAAEVVDDWEKAFE 1173
             GG++      GN DA EA++VVDDWEKA E
Sbjct: 363  DGGSNLGGQPAGNFDALEASDVVDDWEKACE 455


>BF424528 
          Length = 419

 Score =  127 bits (318), Expect = 4e-29
 Identities = 58/136 (42%), Positives = 71/136 (51%)
 Frame = +3

Query: 253 WRCPGCQSVQHTSSKDIKYACFCGKRVDPPSDLYLTPHSCGEPCGKPLEKEVFVTEERKD 312
           W CP C+S    S     Y CFCGK  +PP+D ++ PHSCGE CG+PL+           
Sbjct: 54  WNCPKCRSEYPKSHIPKTYFCFCGKIENPPNDPWILPHSCGEVCGRPLKHS--------- 206

Query: 313 ELCPHACVLQCHPGPCPPCKAFAPPRLCPCGKKRIATRCSDRQSDLTCGQRCDKLLDCGR 372
             C H C+L CHPGPCP C      R C CG      RC  +  + +C + C K LDCG 
Sbjct: 207 --CGHHCLLLCHPGPCPSCPKLVKVR-CFCGCLEDVRRCGFK--EFSCNKPCSKFLDCGV 371

Query: 373 HHCENACHVGPCDPCQ 388
           H C   CH G C PC+
Sbjct: 372 HRCIELCHPGACPPCR 419



 Score = 79.7 bits (195), Expect = 7e-15
 Identities = 45/91 (49%), Positives = 51/91 (55%), Gaps = 3/91 (3%)
 Frame = +3

Query: 423 SCGSNCGNVL--GCSNHICREVCHPGSCGECEFLPSRVKA-CCCGKTKLEDERKSCVDPI 479
           SCG  CG  L   C +H C  +CHPG C  C   P  VK  C CG   LED R+ C    
Sbjct: 168 SCGEVCGRPLKHSCGHH-CLLLCHPGPCPSC---PKLVKVRCFCGC--LEDVRR-CGFKE 326

Query: 480 PTCSKVCSKTLRCGVHACKETCHVGECPPCK 510
            +C+K CSK L CGVH C E CH G CPPC+
Sbjct: 327 FSCNKPCSKFLDCGVHRCIELCHPGACPPCR 419



 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 47/133 (35%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
 Frame = +3

Query: 328 CPPCKAFAPPR------LCPCGKKRIATRCSDRQS-DLTCGQRCDKLL--DCGRHHCENA 378
           CP C++  P         C CGK  I    +D      +CG+ C + L   CG HHC   
Sbjct: 60  CPKCRSEYPKSHIPKTYFCFCGK--IENPPNDPWILPHSCGEVCGRPLKHSCG-HHCLLL 230

Query: 379 CHVGPCDPCQVLIEASCFCSKMTQVLFCGEMAMKGEFEAEGGVFSCGSNCGNVLGCSNHI 438
           CH GPC  C  L++  CFC  +  V  CG              FSC   C   L C  H 
Sbjct: 231 CHPGPCPSCPKLVKVRCFCGCLEDVRRCGFKE-----------FSCNKPCSKFLDCGVHR 377

Query: 439 CREVCHPGSCGEC 451
           C E+CHPG+C  C
Sbjct: 378 CIELCHPGACPPC 416



 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 40/109 (36%), Positives = 53/109 (47%), Gaps = 5/109 (4%)
 Frame = +3

Query: 461 CCCGKTKLEDERKSCVDP--IP-TCSKVCSKTLR--CGVHACKETCHVGECPPCKVLISQ 515
           C CGK +         DP  +P +C +VC + L+  CG H C   CH G CP C  L+  
Sbjct: 114 CFCGKIENPPN-----DPWILPHSCGEVCGRPLKHSCG-HHCLLLCHPGPCPSCPKLVKV 275

Query: 516 KCRCGSTSRTVECYKTTENQKFTCQKPCGAKKNCGRHRCSEKCCPLSGP 564
           +C CG       C      ++F+C KPC    +CG HRC E C P + P
Sbjct: 276 RCFCGCLEDVRRC----GFKEFSCNKPCSKFLDCGVHRCIELCHPGACP 410



 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 42/123 (34%), Positives = 48/123 (38%), Gaps = 11/123 (8%)
 Frame = +3

Query: 601 HCPPCLET-----IFTDLACACGMTSIPPPLPCGTMPPLCQLPCSVP--QPCGHSGSHSC 653
           +CP C        I     C CG    PP  P   +P  C   C  P    CGH     C
Sbjct: 57  NCPKCRSEYPKSHIPKTYFCFCGKIENPPNDPW-ILPHSCGEVCGRPLKHSCGHHCLLLC 233

Query: 654 HFGDCPPCSVPVSKECVGGHVILRNIP-CGSNNIKCNNPCGRTRQCGLHACGRSCH---S 709
           H G CP C   V   C  G   L ++  CG     CN PC +   CG+H C   CH    
Sbjct: 234 HPGPCPSCPKLVKVRCFCG--CLEDVRRCGFKEFSCNKPCSKFLDCGVHRCIELCHPGAC 407

Query: 710 PPC 712
           PPC
Sbjct: 408 PPC 416



 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 35/90 (38%), Positives = 41/90 (44%), Gaps = 3/90 (3%)
 Frame = +3

Query: 575 PHFCSMLCGKKLR--CGQHVCETLCHSGHCPPCLETIFTDLACACGMTSIPPPLPCGTMP 632
           PH C  +CG+ L+  CG H C  LCH G CP C + +     C C    +     CG   
Sbjct: 162 PHSCGEVCGRPLKHSCGHH-CLLLCHPGPCPSCPKLVKVRCFCGC----LEDVRRCGFKE 326

Query: 633 PLCQLPCSVPQPCG-HSGSHSCHFGDCPPC 661
             C  PCS    CG H     CH G CPPC
Sbjct: 327 FSCNKPCSKFLDCGVHRCIELCHPGACPPC 416



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 41/125 (32%), Positives = 53/125 (41%), Gaps = 12/125 (9%)
 Frame = +3

Query: 663 VPVSKECVGGHVILRNIPCGSNNIKCNNPCGRTRQCGLHACGRSCHSPPCDILPGIVKGL 722
           +P+S        +     C S   K + P  +T  C    CG+   +PP D  P I   L
Sbjct: 15  LPISPATASASALWNCPKCRSEYPKSHIP--KTYFC---FCGK-IENPPND--PWI---L 161

Query: 723 RAACGQTCGAP-RSGCRHMCMALCHPGCPCPDARCEFPVTITCSCG-----------RIS 770
             +CG+ CG P +  C H C+ LCHPG PCP   C   V + C CG             S
Sbjct: 162 PHSCGEVCGRPLKHSCGHHCLLLCHPG-PCPS--CPKLVKVRCFCGCLEDVRRCGFKEFS 332

Query: 771 ANVPC 775
            N PC
Sbjct: 333 CNKPC 347



 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 31/86 (36%), Positives = 35/86 (40%), Gaps = 18/86 (20%)
 Frame = +3

Query: 688 CNNPCGRT--RQCGLHACGRSCHSPPCDILPGIVKGLRAACG-----QTCGAPRSGCR-- 738
           C   CGR     CG H C   CH  PC   P +VK +R  CG     + CG     C   
Sbjct: 171 CGEVCGRPLKHSCG-HHCLLLCHPGPCPSCPKLVK-VRCFCGCLEDVRRCGFKEFSCNKP 344

Query: 739 ---------HMCMALCHPGCPCPDAR 755
                    H C+ LCHPG  CP  R
Sbjct: 345 CSKFLDCGVHRCIELCHPGA-CPPCR 419


>TC215070 similar to UP|Q40336 (Q40336) Proline-rich cell wall protein,
           partial (82%)
          Length = 1597

 Score = 37.0 bits (84), Expect(2) = 0.013
 Identities = 50/214 (23%), Positives = 63/214 (29%), Gaps = 36/214 (16%)
 Frame = +1

Query: 443 CHPGSCGECEFLP---SRVKACCCGKTKLEDERKSCVDPIPTCSK---------VCSKTL 490
           C P  C +   LP   S   +  C KT     + S   P   C K         +CSKT 
Sbjct: 226 CTPSLCSKTSSLP*TTSSSTSTPCPKT---SSKASSASPSTLCPKTTSCASYTTICSKTT 396

Query: 491 RCGVHACKET---------------CHVGECPPCKVLISQKCRC----GSTSRTVECYKT 531
            C    C +T               C    CP      S    C       S T  C KT
Sbjct: 397 NCEPSLCPKTACCASYTTLYP*TTSCDTTICP*TTSGASYTTICP*TTSGASYTTLCAKT 576

Query: 532 TENQKFTC-QKPCGAKKNCGRHRCSEKCCPLSGPNNGLTTPDWDPHFCSMLCGKKLRCGQ 590
           T  +   C    C    NC    C++            TT     +  S  C K   C  
Sbjct: 577 THCETTNCLSTSCAKTTNCYTTLCAK------------TTHCETTNCLSTSCAKTTNCYT 720

Query: 591 HVC--ETLCHSGHC--PPCLETIFTDLACACGMT 620
            +C   T C + +C    C  T +    C    T
Sbjct: 721 TLCAKTTHCETTNCLSTSCANTTYCVSTCCTNST 822



 Score = 20.8 bits (42), Expect(2) = 0.013
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 623 PPPLPCGTMPPLCQLPCSV 641
           PPP P    PP  Q  C +
Sbjct: 881 PPPPPVVPYPPPAQPTCPI 937


>BM270367 similar to PIR|S78452|S784 POU-domain protein rdc-1 - human,
           partial (8%)
          Length = 405

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 21/49 (42%), Positives = 23/49 (46%)
 Frame = +2

Query: 316 PHACVLQCHPGPCPPCKAFAPPRLCPCGKKRIATRCSDRQSDLTCGQRC 364
           PH       P P PP   F+PPR CPCG      RCS R+     G RC
Sbjct: 203 PHPPAAPPAPSPSPPSPTFSPPR-CPCG------RCSPRRGS---GSRC 319


>TC208407 similar to UP|Q84KA9 (Q84KA9) RING/C3HC4/PHD zinc finger-like
           protein, partial (36%)
          Length = 644

 Score = 37.0 bits (84), Expect = 0.051
 Identities = 15/46 (32%), Positives = 24/46 (51%)
 Frame = +2

Query: 195 KLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTS 240
           KL KGT+EC +C +    +  +     C  +FH  CI +W  + T+
Sbjct: 287 KLGKGTLECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLASHTT 424


>TC210397 
          Length = 718

 Score = 37.0 bits (84), Expect = 0.051
 Identities = 13/44 (29%), Positives = 23/44 (51%)
 Frame = +2

Query: 191 EIQEKLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKW 234
           EI+E+L +    C +C   +     +    +CY +FH  CI++W
Sbjct: 251 EIKERLPQTEETCAVCLSQLSVEDEVRELMNCYHVFHRECIERW 382


>TC206525 weakly similar to UP|Q41042 (Q41042) Pisum sativum L. (clone
           na-481-5), partial (20%)
          Length = 752

 Score = 37.0 bits (84), Expect = 0.051
 Identities = 14/43 (32%), Positives = 26/43 (59%), Gaps = 1/43 (2%)
 Frame = -1

Query: 90  HRSNHHVAHRVEREHVAHRTDRDHVAHRVE-RERVAHRVEREH 131
           H+ +HH  H+++R H  H+ DR H  H+++ R    H+++  H
Sbjct: 437 HQIDHHHFHQIDRHHHFHQIDRHHP*HQIDHRHHP*HQIDHHH 309



 Score = 32.7 bits (73), Expect = 0.96
 Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -1

Query: 125 HRVEREHVAHRMEREHVAHRVEREHVAHRVE-REHVAHRVE 164
           H+++  H  H+++R H  H+++R H  H+++ R H  H+++
Sbjct: 437 HQIDHHHF-HQIDRHHHFHQIDRHHP*HQIDHRHHP*HQID 318



 Score = 30.4 bits (67), Expect = 4.8
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -2

Query: 28  KGAGASSSASTTSTTTTASTTTA--AAATTTVDQPTSLHSHEKNTNSDGGSSNQGAVVAP 85
           K    S + STT+ +T ++TTT+  + ATTT  + T+     K+T +   S+       P
Sbjct: 481 KVGSISPTPSTTTPSTKSTTTTSTKSTATTTSTKSTATTPSTKSTTATTPSTKSTTTTTP 302

Query: 86  T 86
           T
Sbjct: 301 T 299


>TC206176 weakly similar to UP|Q8LPA7 (Q8LPA7) Cold shock protein-1, partial
           (77%)
          Length = 883

 Score = 36.6 bits (83), Expect = 0.066
 Identities = 26/79 (32%), Positives = 32/79 (39%), Gaps = 6/79 (7%)
 Frame = -2

Query: 89  RHRSNHHVAHRVEREHVAH-----RTDRDHVAHRVERERVA-HRVEREHVAHRMEREHVA 142
           R R +H    R  R H+ H     RT   H  H      V  H    +H  HR+   H  
Sbjct: 576 RRRLHHQRTSRHRRLHICHHHHLLRTCPHHRLHCNP*PDVPIHHSCSKHRLHRLFHHHRN 397

Query: 143 HRVEREHVAHRVEREHVAH 161
           HR+ R H  HR  R H +H
Sbjct: 396 HRLHRSHHHHRSHRLHRSH 340



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
 Frame = -3

Query: 30  AGASSSASTTSTTTTAST----TTAAAATTTVDQPTSLHS--HEKNTNSDGGSSNQGAVV 83
           A  +S+AS+T+T TTAST    TT A A+T     TS           +  GS + GAV 
Sbjct: 437 ASTASTASSTTTVTTASTVATTTTVATASTVATSTTSSSPAIASATITASSGSLDAGAVG 258

Query: 84  A 84
           A
Sbjct: 257 A 255


>TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
           protein 1 precursor, partial (58%)
          Length = 1213

 Score = 30.0 bits (66), Expect(2) = 0.076
 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
 Frame = +2

Query: 89  RHRSNHHVAHRVEREHVAHRTDRDHVAHRVER------ERVAHRVER--EHVAHRMEREH 140
           + +++HH   R +R HV    +     HR ER       R+  R E   +H  HR  R  
Sbjct: 197 QRQNHHHRLRRRQRRHVGPSLEAPLHLHRQERPLPPRPPRLLRRQEAPPDHQRHRPRR-- 370

Query: 141 VAHRVEREHVAHRVEREHVAHRVERGRGR 169
             H V       R+ R    HR  R + R
Sbjct: 371 --HNVPSHRHRPRIRRLRQHHRPPRRKSR 451



 Score = 25.0 bits (53), Expect(2) = 0.076
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 34  SSASTTSTTTTASTTTAAAATTTVDQPTS 62
           S   TTS  ++ ST ++  +TTT   PTS
Sbjct: 100 SPTRTTSPASSQSTPSSPPSTTTSPSPTS 186


>TC204100 homologue to UP|Q93WA5 (Q93WA5) Ribosomal protein L32, complete
          Length = 1145

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 30/126 (23%), Positives = 43/126 (33%)
 Frame = +3

Query: 37  STTSTTTTASTTTAAAATTTVDQPTSLHSHEKNTNSDGGSSNQGAVVAPTFARHRSNHHV 96
           S T TT T +       TTT           KNT    G +++  +   + +    +HH 
Sbjct: 66  SKTRTTVTRNHKETRTQTTTT----------KNT----GHNHKP*LTTSSLSFSSLHHHH 203

Query: 97  AHRVEREHVAHRTDRDHVAHRVERERVAHRVEREHVAHRMEREHVAHRVEREHVAHRVER 156
            H      + HR +  H  H   R    H      + HR    H  H + R H    + R
Sbjct: 204 HHHESNHGLCHRHNHHHHHHHSHRHNHRHGY---GIHHRHRHRHYDHHIHRHHDCILLLR 374

Query: 157 EHVAHR 162
               HR
Sbjct: 375 RRRRHR 392


>TC231630 weakly similar to UP|Q7PR65 (Q7PR65) ENSANGP00000016899 (Fragment),
           partial (13%)
          Length = 709

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 16/25 (64%), Positives = 22/25 (88%)
 Frame = +1

Query: 32  ASSSASTTSTTTTASTTTAAAATTT 56
           A+++A+TT+TTTTA+TTTA   TTT
Sbjct: 400 ATTTAATTATTTTANTTTAMGRTTT 474


>TC206524 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
           precursor, partial (6%)
          Length = 464

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -3

Query: 93  NHHVAHRVEREHVAHRTDRDHVAHRVERERVAHRVEREHVAHRMEREHVAHR 144
           +HH  H+++R H+ H+ D  H  H        H+++R H  HR    H+ H+
Sbjct: 141 HHHHFHQIDRHHLFHQIDHHHHHHSY------HQIDRHHSFHR----HLYHQ 16



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = -1

Query: 34  SSASTTSTTTTASTTTAAAATTTVDQPTSLHSHEKNTNSDGGSSNQGAVV 83
           S+ +TTST +TA+T++  + TTT   PT+       T S G S+ +  ++
Sbjct: 146 STTTTTSTKSTATTSSTKSTTTTTTTPTT--KSTATTPSTGTSTTRTLII 3



 Score = 26.9 bits (58), Expect(2) = 0.22
 Identities = 15/47 (31%), Positives = 28/47 (58%), Gaps = 2/47 (4%)
 Frame = -1

Query: 28  KGAGASSSASTTSTTTTASTTTAAAATTTV--DQPTSLHSHEKNTNS 72
           K    S++ ST +++T ++TTT+  +TTT    + T+  S  K+T +
Sbjct: 221 KVGSISTTPSTATSSTKSATTTSTKSTTTTTSTKSTATTSSTKSTTT 81



 Score = 26.6 bits (57), Expect(2) = 0.22
 Identities = 10/28 (35%), Positives = 16/28 (56%)
 Frame = -3

Query: 90  HRSNHHVAHRVEREHVAHRTDRDHVAHR 117
           H  +HH  H+++R H  HR    H+ H+
Sbjct: 87  HHHHHHSYHQIDRHHSFHR----HLYHQ 16


>TC209977 UP|Q9HF30 (Q9HF30) Pheromone MFalpha1D (Fragment), partial (41%)
          Length = 1421

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 21/64 (32%), Positives = 26/64 (39%), Gaps = 2/64 (3%)
 Frame = -1

Query: 608  TIFTDLACACGMTSIPPPLPCGTMPPLCQLPCSVPQPCGHSGSHSCHFGDCPP--CSVPV 665
            T+       C   S+ PPL    +PPLC LP   P P     SH       P   CS+P+
Sbjct: 1343 TVHASSFVICSPPSLLPPLLSFFLPPLCDLPLFPPSPSMTVHSHLSDLQVSPSLFCSLPL 1164

Query: 666  SKEC 669
               C
Sbjct: 1163 LLVC 1152


>TC232709 weakly similar to UP|Q9LZJ6 (Q9LZJ6) RING-H2 zinc finger protein
           ATL5 (At3g62690), partial (19%)
          Length = 987

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 20/81 (24%), Positives = 37/81 (44%), Gaps = 2/81 (2%)
 Frame = +3

Query: 183 SSLPQLVQEIQEKLTKG--TVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTS 240
           +SLP+L+ +  ++  +G   V C +C   +          +C  IFH++C+ KW  + T+
Sbjct: 318 ASLPKLLYKQTDQFKQGEEVV*CSVCLGTIVEDTISRVLPNCKHIFHVDCVDKWFNSNTT 497

Query: 241 VDLSAEKNLGFNWRCPGCQSV 261
                         CP C++V
Sbjct: 498 --------------CPICRTV 518


>BE059711 
          Length = 432

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 13/70 (18%), Positives = 32/70 (45%)
 Frame = +3

Query: 93  NHHVAHRVEREHVAHRTDRDHVAHRVERERVAHRVEREHVAHRMEREHVAHRVEREHVAH 152
           +HH+ H  +   + H+T   H+ ++ +   + H+    H+ H  +   + H+    H+ H
Sbjct: 36  DHHLHH*AKNRDLHHQTRNYHLHYQAKNRDLHHQARDHHLHH*AKNRDLHHQARDHHLHH 215

Query: 153 RVEREHVAHR 162
           +     + H+
Sbjct: 216 QAPGRLLHHQ 245



 Score = 31.2 bits (69), Expect = 2.8
 Identities = 17/70 (24%), Positives = 24/70 (34%)
 Frame = +3

Query: 98  HRVEREHVAHRTDRDHVAHRVERERVAHRVEREHVAHRMEREHVAHRVEREHVAHRVERE 157
           H   R+H  H   ++   H   R    H   +    H   R+H  H   +    H   R+
Sbjct: 21  HYQARDHHLHH*AKNRDLHHQTRNYHLHYQAKNRDLHHQARDHHLHH*AKNRDLHHQARD 200

Query: 158 HVAHRVERGR 167
           H  H    GR
Sbjct: 201 HHLHHQAPGR 230


>TC217193 similar to UP|Q7XJN2 (Q7XJN2) At2g40650 protein, partial (88%)
          Length = 1691

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 27/99 (27%), Positives = 40/99 (40%)
 Frame = +3

Query: 84  APTFARHRSNHHVAHRVEREHVAHRTDRDHVAHRVERERVAHRVEREHVAHRMEREHVAH 143
           +PT  R R   H +HR          DRD+     +RER   R          +R+    
Sbjct: 861 SPTRERDRDRRHDSHRHRDRDYDRDYDRDY-----DRERGRGRDRDRDRERDRDRDRYRL 1025

Query: 144 RVEREHVAHRVEREHVAHRVERGRGRSGNMAGRQYGSRD 182
           R E+++   R  RE      +R RGR  + +  +  SRD
Sbjct: 1026REEKDYGRDREGRERERREKDRDRGRRRSHSRSRSRSRD 1142


>TC229486 similar to UP|Q76KV2 (Q76KV2) DNA binding with one finger 2
           protein, partial (21%)
          Length = 1297

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 16/27 (59%), Positives = 20/27 (73%)
 Frame = +1

Query: 30  AGASSSASTTSTTTTASTTTAAAATTT 56
           +  +S  + TSTTTTA+TT A AATTT
Sbjct: 115 SSTTSDVTLTSTTTTAATTAATAATTT 195


>TC205952 
          Length = 1414

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = +3

Query: 18  HRPPRQEWIPKGAGASSSASTTSTTTTASTTTAAAATTTVDQPT 61
           H  P    I   A AS S  +  TT +AS TTAAAA + VD+P+
Sbjct: 903 HPSPASCPIGSNATASKSIWSLPTTISASATTAAAAASYVDEPS 1034


>TC230110 similar to UP|Q8LDR0 (Q8LDR0) Zinc finger protein OBP4-like,
           partial (16%)
          Length = 998

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +3

Query: 33  SSSASTTSTTTTASTTTAAAATTT--VDQPTSLHSHEKNTNSDGGSSNQGAVVAPTFARH 90
           +S +S+ S++ TA+  TAA  TTT  V  P +L+    N N++  +  +  ++ P    +
Sbjct: 114 NSHSSSGSSSLTAAAATAATTTTTEAVSAPETLNLDSNNNNNNNNNMQESKLLIPALETN 293

Query: 91  RSNH 94
              H
Sbjct: 294 PLEH 305


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.320    0.134    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,196,018
Number of Sequences: 63676
Number of extensions: 1705278
Number of successful extensions: 12739
Number of sequences better than 10.0: 159
Number of HSP's better than 10.0 without gapping: 10676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12283
length of query: 1173
length of database: 12,639,632
effective HSP length: 108
effective length of query: 1065
effective length of database: 5,762,624
effective search space: 6137194560
effective search space used: 6137194560
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)


Medicago: description of AC141436.6