BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141436.5 + phase: 0 /pseudo
(364 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC206238 weakly similar to UP|Q7PX96 (Q7PX96) AgCP12237 (Fragmen... 75 4e-14
TC231841 62 3e-10
TC233392 62 3e-10
CO986021 60 1e-09
CO979823 58 6e-09
CA851073 58 8e-09
BG404993 57 1e-08
TC233956 57 2e-08
TC211809 51 7e-07
CO984521 51 7e-07
TC231922 51 7e-07
TC234526 similar to UP|Q9XH61 (Q9XH61) Serine carboxypeptidase, ... 43 2e-06
TC222557 42 3e-06
TC213061 48 8e-06
AW595917 47 1e-05
BE610670 47 2e-05
TC222857 44 9e-05
CF921567 44 9e-05
TC221865 44 1e-04
TC222789 43 3e-04
>TC206238 weakly similar to UP|Q7PX96 (Q7PX96) AgCP12237 (Fragment), partial
(9%)
Length = 1259
Score = 75.5 bits (184), Expect = 4e-14
Identities = 63/200 (31%), Positives = 94/200 (46%), Gaps = 19/200 (9%)
Frame = +3
Query: 57 PENLKHFIWLAMHGNLPTNAFRAGKHLTSDSSCKRCGASIESLLHTFRDCPLSLAIWDDL 116
PE + + + A G L TN R +H + DSSC RC E+ LH RDCP A W +
Sbjct: 129 PERIINLLGNAADGALFTNPLRRYRHTSMDSSCPRCPELEETCLHALRDCPKVAAFWRSV 308
Query: 117 LFNK-DTNFNSQDFNWWFK-----HYALALNGNIFVITCWVLWKARNHKVFNGN---DWV 167
L K F + D W + A F I +LW++RN VF + D++
Sbjct: 309 LPKKLAPKFFNGDVAVWLETNLSFSEAAFFWPTFFGIAVELLWESRNDLVFYKDGTWDYL 488
Query: 168 CLSHI----YSLHSDVV-AHISNDVIQKPIK*VKWIPPLDN-----IIKVNVDGISLSNH 217
LS I ++ + D + AH S+ I P +KW PL ++++NV G +
Sbjct: 489 DLSDITDIVFNRYKDCMRAHASH--ILMPRNLLKWRRPLPLSHGHWLLRLNVSGAYDRSS 662
Query: 218 GRSVFGGLIRNNNGDWLLGF 237
+ GG+ R+NN ++LGF
Sbjct: 663 DTAACGGIFRDNNDRFVLGF 722
>TC231841
Length = 791
Score = 62.4 bits (150), Expect = 3e-10
Identities = 52/225 (23%), Positives = 81/225 (35%), Gaps = 44/225 (19%)
Frame = +3
Query: 5 IDESSQDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFI 64
I D +W P+G Y+ KS Y L + Q ++ +WKL LP + F
Sbjct: 45 IQPQQGDQWVWKADPSGQYTAKSAYGVLWGEMFE---EQQDGVFEELWKLKLPSKITIFA 215
Query: 65 WLAMHGNLPTNAFRAGKHL-TSDSSCKRCGASIESLLHTFRDCPLSLAIWDDLL------ 117
W + LPT + K + D C C ++ ES H F C +W + L
Sbjct: 216 WRLIRDRLPTRSNLRRKQIEVDDPRCPFCRSAEESAAHLFFHCSRIAPVWWESLSWVNLL 395
Query: 118 ---------------FNKDTNFNSQDFNWWFKHYALALNGNIFVITCWVLWKARNHKVFN 162
+ + + WW+ LAL W +WK RN+ +F+
Sbjct: 396 GVFPNHPRQHFLQHIYGVTAGMRASRWKWWW----LALT--------WTIWKQRNNMIFS 539
Query: 163 GND--------------WVCLSHI---YSLH-----SDVVAHISN 185
W L+H+ +S+H S++ A SN
Sbjct: 540 NGTFNANKILDEAIFLIWTWLTHLEKDFSIHYNQWSSNIRAAFSN 674
>TC233392
Length = 1145
Score = 62.4 bits (150), Expect = 3e-10
Identities = 47/176 (26%), Positives = 69/176 (38%), Gaps = 19/176 (10%)
Frame = -1
Query: 5 IDESSQDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFI 64
I + D +W H P +YS +S Y+ L + G+ Q Q +WKL +P F
Sbjct: 674 IQQQVPDTWVWKHEPNELYSTRSAYKLLQGH---LEGEDQDGALQDLWKLKIPAKASIFA 504
Query: 65 WLAMHGNLPTNA-FRAGKHLTSDSSCKRCGASIESLLHTFRDCPLSLAIWDDLL------ 117
W + LPT + + + DS C C E H F +C +W +
Sbjct: 503 WRLIRDRLPTKSNLHRRQVVLEDSLCPFCRIREEDASHIFLECNKIRPLWWESQTWVRSL 324
Query: 118 ----FNKDTNF--------NSQDFNWWFKHYALALNGNIFVITCWVLWKARNHKVF 161
NK +F S+ +N W K + +AL W LWK RN +F
Sbjct: 323 GVSPINKRQHFLQHVHGTPGSKRYNRW-KTWWIALT--------WSLWKHRNQVIF 183
>CO986021
Length = 900
Score = 60.5 bits (145), Expect = 1e-09
Identities = 35/113 (30%), Positives = 52/113 (45%), Gaps = 1/113 (0%)
Frame = -1
Query: 2 SIFIDESSQDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLK 61
+I I + QD +W PTG+YS KS Y+ L N + GQ ++ +WKL +P +
Sbjct: 810 AISIHQQLQDSMLWKADPTGIYSTKSAYRLLLPN--NRPGQ-HSSNFKILWKLKIPPRAE 640
Query: 62 HFIWLAMHGNLPTNAFRAGKHLT-SDSSCKRCGASIESLLHTFRDCPLSLAIW 113
F W L A +H+ D C CG E H F C +++ +W
Sbjct: 639 LFSWRLFRDRLSIRANLLRRHVALQDIMCPLCGNHQEEAGHLFFHCRMTIGLW 481
>CO979823
Length = 853
Score = 58.2 bits (139), Expect = 6e-09
Identities = 42/167 (25%), Positives = 63/167 (37%), Gaps = 10/167 (5%)
Frame = -2
Query: 5 IDESSQDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFI 64
I +D +W P G YS KSGY L + Q + IWKL +P F
Sbjct: 720 IHPQREDKWLWKPEPGGHYSTKSGYHVLWGELTE---EIQDADFAEIWKLKIPTKAAVFA 550
Query: 65 WLAMHGNLPTNA-FRAGKHLTSDSSCKRCGASIESLLHTFRDCPLSLAI-WDDLLFNKDT 122
W + LPT + R + + D C C E H F +C +L + W+ + +
Sbjct: 549 WRLVRDRLPTKSNLRRRQVMVQDMVCPLCNNIEEGAAHLFFNCTKTLPLWWESMSWVNLK 370
Query: 123 NFNSQDFNWWFKHYALALNGNI--------FVITCWVLWKARNHKVF 161
Q F Y + + ++ W +W+ RN VF
Sbjct: 369 TAMPQTPRQHFLQYGTDIADGLKSKRWKCWWIALTWTIWQHRNKVVF 229
>CA851073
Length = 633
Score = 57.8 bits (138), Expect = 8e-09
Identities = 47/176 (26%), Positives = 74/176 (41%), Gaps = 11/176 (6%)
Frame = +1
Query: 2 SIFIDESSQDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLK 61
+I I QD +W P G+YS KS Y+ L + C ++ ++ IWKL +P
Sbjct: 1 AIQIQSHLQDTMVWKADPCGVYSTKSAYRILMT-CNRHV--SEANIFKTIWKLKIPPRAA 171
Query: 62 HFIWLAMHGNLPT--NAFRAGKHLTSDSSCKRCGASIESLLHTFRDCPLSLAI-WDDLLF 118
F W + LPT N R + ++ C CG E H F +C ++ + W+ + +
Sbjct: 172 VFSWRLIKDRLPTRHNLLRRNVSI-QENECPLCGYEQEEADHLFFNCKMTRGLWWESMRW 348
Query: 119 NKDTNFNSQDFNWWFKHYALALN-GNIFVITC--WV-----LWKARNHKVFNGNDW 166
N+ S F + G C W+ +WK RN +F GN +
Sbjct: 349 NQIVGPLSVSPASHFVQFCDGFGAGRNHTRWCGWWIALTSSIWKHRNLLIFQGNQF 516
>BG404993
Length = 412
Score = 57.4 bits (137), Expect = 1e-08
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = -3
Query: 5 IDESSQDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFI 64
I + D W P+G YS K+ Y+ L + G + + +WKL +P F
Sbjct: 350 IQQHEADSWTWKADPSGNYSTKTAYELLQE---AIRGDNEDGIFVQLWKLKIPPKAPVFT 180
Query: 65 WLAMHGNLPTNA-FRAGKHLTSDSSCKRCGASIESLLHTFRDCPLSLAIW 113
W ++ LPT R + SDS C C S E H F +C +L W
Sbjct: 179 WRLINDRLPTKVNLRRRQVEISDSLCPLCNNSEEDAAHLFFNCNKTLPFW 30
>TC233956
Length = 757
Score = 56.6 bits (135), Expect = 2e-08
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Frame = +2
Query: 3 IFIDESSQDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKH 62
I ++ + D +W TG+ S KS YQ + S + Q ++ +W++ +P
Sbjct: 35 IRLNNNFNDTWVWRAESTGIISTKSAYQVIKSE---LDDEGQHLGFKKLWEIKVPPKALS 205
Query: 63 FIWLAMHGNLPTNAFRAGKHL-TSDSSCKRCGASIESLLHTFRDCPLSLAIWDDLL--FN 119
F+W + LPT + + D C C + E+ H F C + +W + L
Sbjct: 206 FVWRLLWDRLPTKDNLIKRQIQVEDDLCPFCHSQSETASHLFFTCGKIMPLWWEFLSWVK 385
Query: 120 KDTNFNSQDFNWWFKHYALALN--GNIFVITCWV-----LWKARNHKVF 161
+D F+ + + + +HY+ A + N W+ +W+ RN +F
Sbjct: 386 EDKVFHCRPMDNFLQHYSSAASKVSNTRRTMWWIAVTNSIWRLRNDIIF 532
>TC211809
Length = 895
Score = 51.2 bits (121), Expect = 7e-07
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Frame = +2
Query: 21 GMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFIWLAMHGNLPT-NAFRA 79
G YS KS Y+ L F T+ +W L +P F W + LPT R
Sbjct: 200 GNYSTKSAYRLLMEATGEFP---VDRTYVDLWNLKIPSKAIVFAWRLIKDRLPTWTNLRV 370
Query: 80 GKHLTSDSSCKRCGASIESLLHTFRDCPLSLAIWDDLL--FNKDTNFNSQDFNWWFKHYA 137
+ +DS C C +S E H F C + +W + N F + + +H
Sbjct: 371 RQVELNDSRCPLCNSSEEDAAHLFFHCTKTEXLWWETQSWVNSLGAFPHNPKDHFLQHDN 550
Query: 138 LALNGN-------IFVITCWVLWKARNHKVFNGNDW 166
+ G ++V WV+WK RN VF+ + +
Sbjct: 551 RSAGGVXARRWKCLWVALTWVIWKHRNGVVFHNHSF 658
>CO984521
Length = 716
Score = 51.2 bits (121), Expect = 7e-07
Identities = 39/170 (22%), Positives = 63/170 (36%), Gaps = 22/170 (12%)
Frame = -2
Query: 15 WTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFIWLAMHGNLPT 74
W P+G YS KS Y+ L + G+ Q ++ +WKL +P + F W + LPT
Sbjct: 634 WAAEPSGCYSTKSAYKALHHVTV---GEEQDGKFKELWKLRVPLKVAIFAWRLIQDKLPT 464
Query: 75 NA-FRAGKHLTSDSSCKRCGASIESLLHTFRDCPLSLAIW-------------------- 113
A R + + C C + E+ H F C +W
Sbjct: 463 KANLRKKRVELQEYLCPLCRSVEETASHLFFHCSKVSPLWWESQSWVNMMGVFPYQPDQH 284
Query: 114 -DDLLFNKDTNFNSQDFNWWFKHYALALNGNIFVITCWVLWKARNHKVFN 162
+F + + WW+ F +T + +WK RN +F+
Sbjct: 283 FSQHIFGASVGLQGKRWQWWW-----------FALT-YSIWKHRNSIIFS 170
>TC231922
Length = 803
Score = 51.2 bits (121), Expect = 7e-07
Identities = 30/112 (26%), Positives = 45/112 (39%), Gaps = 1/112 (0%)
Frame = -3
Query: 3 IFIDESSQDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKH 62
I I + D W +G+YS KS Y+ L S + + +Q +W L +P
Sbjct: 468 ISIQNQAHDSMFWKADSSGVYSTKSAYRLLMP---SISPAPSRRIFQILWHLKIPPRAAV 298
Query: 63 FIWLAMHGNLPTNAFRAGKHLT-SDSSCKRCGASIESLLHTFRDCPLSLAIW 113
F W LPT + + + D C CG E H F C ++ +W
Sbjct: 297 FSWRLFLDRLPTRGNLSRRSIPIQDIMCPLCGCQHEEAGHLFFHCKMTKGLW 142
>TC234526 similar to UP|Q9XH61 (Q9XH61) Serine carboxypeptidase, partial
(11%)
Length = 603
Score = 42.7 bits (99), Expect(2) = 2e-06
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 14 IWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFIWLAMHGNLP 73
+W + G +SV YQ + F + E W+ IWK++ P+ ++ FIW +H L
Sbjct: 19 LWLGNTLGDFSVSRAYQRINQ----FHTLNESENWKKIWKINAPQKIRVFIWQLVHKRLT 186
Query: 74 T 74
T
Sbjct: 187T 189
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 14/26 (53%), Positives = 17/26 (64%)
Frame = +3
Query: 97 ESLLHTFRDCPLSLAIWDDLLFNKDT 122
E++LH RDCP LA D LLF + T
Sbjct: 252 ETILHVMRDCP--LASQDVLLFLRIT 323
>TC222557
Length = 1002
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 34/135 (25%), Positives = 54/135 (39%), Gaps = 16/135 (11%)
Frame = +1
Query: 46 ETWQWIWKLHLPENLKHFIWLAMHGNLPT--NAFRAGKHLTSDSSCKRCGASIESLLHTF 103
E + +W+L +P F W + +PT N +R L ++ C C E H F
Sbjct: 424 EALEDLWQLKIPLKATTFAWRLIKERIPTKGNLWRRRVQL-NNLMCPFCNRQEEEASHLF 600
Query: 104 RDCPLSLAI-WDDLLFNKDTNFNSQDFNWWFKHYALALNGN--------IFVITCWVLWK 154
+CP L + W+ L + K S + + L G +V W +W+
Sbjct: 601 FNCPRILPLWWESLAWTKTVGVFSPIPRQNYMQHTLISKGKHLQARWKCWWVALTWSIWR 780
Query: 155 ARN-----HKVFNGN 164
RN +K FNG+
Sbjct: 781 HRNRIVFLNKAFNGS 825
Score = 26.6 bits (57), Expect(2) = 3e-06
Identities = 11/37 (29%), Positives = 16/37 (42%)
Frame = +3
Query: 5 IDESSQDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAG 41
ID + D +W P G +S +S Y+ L G
Sbjct: 312 IDRWTLDCWVWKPEPNGQFSTRSAYRMLLEGAADQTG 422
>TC213061
Length = 823
Score = 47.8 bits (112), Expect = 8e-06
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 10/163 (6%)
Frame = +2
Query: 10 QDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFIWLAMH 69
+D +W +G Y +S Y+ + + Q ++ +WKL +P + F W +
Sbjct: 125 EDQWVWAAESSGSYLARSAYRVIREG---IPEEEQDREFKELWKLKVPMKVTMFAWRLLK 295
Query: 70 GNLPT-NAFRAGKHLTSDSSCKRCGASIESLLHTFRDCPLSLAIWDD-----LLFNKDTN 123
LPT + R + + C C + ES H F C L IW + L +
Sbjct: 296 DILPTRDNLRRKRVELHEYVCPLCRSMDESASHLFFHCSKILPIWWESLSWVKLVGAFPH 475
Query: 124 FNSQDFNWWFKHYALALNGN----IFVITCWVLWKARNHKVFN 162
F+ L GN ++ W +WK RN +F+
Sbjct: 476 HPRHHFHQHSHEVYQGLQGNRWKWWWLALTWTIWKHRNDIIFS 604
>AW595917
Length = 404
Score = 47.4 bits (111), Expect = 1e-05
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 12/123 (9%)
Frame = +1
Query: 51 IWKLHLPENLKHFIWLAMHGNLPTNAFRAGKHLTSDSSCKRCGASIESLLHTFRDCPLSL 110
+WKL +P F W + LPT A + SDS C C S E H F +C +L
Sbjct: 7 LWKLKIPPKAAVFTWRLIKDQLPTKANLRRQMEISDSLCPLCNNSKEDATHLFFNCSKTL 186
Query: 111 AI-WDDLLFNKDTNFNSQDFNWWFKHYALALNGNIFVI-----TCW------VLWKARNH 158
W+ L + K +D +H+ +GN CW +W+ RN
Sbjct: 187 PFWWESLSWVKTVGAFPKDLR---EHFLQHNSGNTAGTKATR*RCWWIALTRTIWQHRNK 357
Query: 159 KVF 161
VF
Sbjct: 358 LVF 366
>BE610670
Length = 368
Score = 46.6 bits (109), Expect = 2e-05
Identities = 32/107 (29%), Positives = 43/107 (39%), Gaps = 1/107 (0%)
Frame = -2
Query: 8 SSQDIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFIWLA 67
SS D IW P+G YS KS Y L SF + + IW L +P F W
Sbjct: 322 SSLDSLIWRADPSGAYSTKSAYNLLKGEG-SF--DNEDSASKIIWNLKIPPRTIAFSWRI 152
Query: 68 MHGNLPTNAFRAGKHLTSDS-SCKRCGASIESLLHTFRDCPLSLAIW 113
LPT A + + S C C E++ H C + ++W
Sbjct: 151 FKNRLPTKANLRRRQVELPSYRCPLCDLEEENVGHIMFSCTRTRSLW 11
>TC222857
Length = 657
Score = 44.3 bits (103), Expect = 9e-05
Identities = 32/134 (23%), Positives = 51/134 (37%), Gaps = 22/134 (16%)
Frame = -3
Query: 51 IWKLHLPENLKHFIWLAMHGNLPTNA-FRAGKHLTSDSSCKRCGASIESLLHTFRDCPLS 109
+WK+ +P F W + LPT A RA + SD +C C E+ H F C +
Sbjct: 613 LWKIKIPSKFLMFAWRLLWDRLPTKANLRARQVQISDLTCPFCRRVEETASHMFIHCIKT 434
Query: 110 LAIWDDLL-------------------FN--KDTNFNSQDFNWWFKHYALALNGNIFVIT 148
IW + + F+ K+ S+ + WW ++
Sbjct: 433 QPIWWETMNWINMQGPLPWSITDHFMQFSSLKEAGIRSRRWQWW------------WMAV 290
Query: 149 CWVLWKARNHKVFN 162
W +W+ RN VF+
Sbjct: 289 TWSIWQLRNSIVFS 248
>CF921567
Length = 686
Score = 44.3 bits (103), Expect = 9e-05
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = -1
Query: 19 PTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFIWLAMHGNLPTNAFR 78
P G+YS KS Y+ L A + +W L +P F W LPT
Sbjct: 680 PNGLYSTKSAYKVL*EG---HASAIEDRVLNIMWSLKIPPRASAFSWRLFKNRLPTRENL 510
Query: 79 AGKHLTSDS-SCKRCGASIESLLHTFRDCPLSLAIW 113
+ ++ + SC C ES+ H F +C + ++W
Sbjct: 509 KRRQVSLHTYSCPLCDLEEESVNHLFFNCSKTRSLW 402
>TC221865
Length = 1045
Score = 43.9 bits (102), Expect = 1e-04
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 10/162 (6%)
Frame = -3
Query: 11 DIKIWTHSPTGMYSVKSGYQWLTSNCLSFAGQTQQETWQWIWKLHLPENLKHFIWLAMHG 70
D +W P G YS +S Y + A ++ IWKL +P F +
Sbjct: 668 DCWVWKSEPNGHYSTRSAYHLMQHEA---AKANTDPAFEEIWKLKIPAKAAIFA*RLVKD 498
Query: 71 NLPT-NAFRAGKHLTSDSSCKRCGASIESLLHTFRDCPLSLAIWDDLL--FNKDTNFNSQ 127
LPT N R + + + C C E H F C + +W + L N F++
Sbjct: 497 RLPTKNNLRRRQVQLNGTLCLFCRNYEEEASHLFFSCTKTQPVWWESLSWINTSGAFSAN 318
Query: 128 DFNWWFKH-YALALNGNIFVITCW------VLWKARNHKVFN 162
+ + +H + L CW +W+ RN +F+
Sbjct: 317 PRHHFLQHSFGLLGLKQYNR*KCWWVALTFTIWQHRNRTIFS 192
>TC222789
Length = 954
Score = 42.7 bits (99), Expect = 3e-04
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Frame = +2
Query: 44 QQETWQWIWKLHLPENLKHFIWLAMHGNLPTNAFRAGKHL-TSDSSCKRCGASIESLLHT 102
+ + ++ +WKL +P + F W + LPT + + D SC C E H
Sbjct: 341 KDKAFEKLWKLKVPIKYEVFAWRLLRDRLPTKVNLHRRQIQVMDRSCPFCRNVEEDAGHL 520
Query: 103 FRDCPLSLAI-WDDLLFNKDTNFNSQDFNWWFKHYALALNGNI--------FVITCWVLW 153
F C + I W+ L + + +D F + L + G I ++ W +W
Sbjct: 521 FFHCSKIIPIWWESLSWVNISGALPKDPRQHFLQHDLIMAGGIRTTRWKCWWLAVTWTIW 700
Query: 154 KARNHKVF 161
+ RN +F
Sbjct: 701 QQRNKIIF 724
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.337 0.147 0.506
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,989,114
Number of Sequences: 63676
Number of extensions: 396438
Number of successful extensions: 3573
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 3474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3534
length of query: 364
length of database: 12,639,632
effective HSP length: 99
effective length of query: 265
effective length of database: 6,335,708
effective search space: 1678962620
effective search space used: 1678962620
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC141436.5