TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141414.5 - phase: 0 /pseudo
         (689 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC221076 weakly similar to GB|AAN46821.1|24111389|BT001064 At4g3...    63  4e-10
TC213313                                                               59  5e-09
TC225614 UP|Q84ZV7 (Q84ZV7) R 12 protein, partial (88%)                32  0.72
TC233085 similar to UP|Q86NU9 (Q86NU9) AT31631p, partial (10%)         32  0.94
TC217708 similar to UP|O65896 (O65896) Cytidine deaminase 1  (At...    31  1.6
TC225612 homologue to UP|Q84ZU8 (Q84ZU8) R 10 protein, complete        31  1.6
TC234424                                                               30  3.6
TC225611 homologue to UP|Q84ZU6 (Q84ZU6) R 1 protein, complete         30  4.7
TC230883 UP|Q8LKR3 (Q8LKR3) Receptor-like kinase RHG4, complete        30  4.7
TC233199                                                               29  6.1
TC207488 similar to UP|Q9SJE0 (Q9SJE0) T27G7.21, partial (58%)         29  6.1
TC207788 homologue to UP|Q8W2C0 (Q8W2C0) Functional candidate re...    29  6.1

>TC221076 weakly similar to GB|AAN46821.1|24111389|BT001064
           At4g32250/F10M6_110 {Arabidopsis thaliana;} , partial
           (31%)
          Length = 829

 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 56/178 (31%), Positives = 75/178 (41%), Gaps = 14/178 (7%)
 Frame = +3

Query: 490 QGIITNIHADGEVRVAFFGLSGLWKGDPSDLQAEQIFEV------GEWVRLKENVNNWKS 543
           QG +  +  + +       L G+   DP  + A  +  V      G+WV LKE       
Sbjct: 3   QGNVVGLERNADHGFVLVRLHGVH--DPVRIHASTLERVTNGLGAGDWVHLKEEDEKHSP 176

Query: 544 IGPGSVGVVQGIGYEGGETDRSTFVGFCGEQEKWVGPSSHLERVDKLIVGQKVRVKQNVK 603
                VG++  I  +G  T     VGF G Q  W G SS LE  +   VGQ +R+K NV 
Sbjct: 177 -----VGILHSINRDGRVT-----VGFIGLQTLWNGNSSELEMAEPYCVGQFIRLKTNVL 326

Query: 604 QPRFGWSGHTHA--SIGTIQAIDADGKLWIYTPA------GSRTWMLDPSEVEVVEEK 653
            PRF W        + G I  I  +G L +  P          T + DPSEV+VV  K
Sbjct: 327 SPRFEWPRKREGAWATGKISWILPNGCLVVKFPGMLNFLDAPSTVLADPSEVDVVNFK 500



 Score = 36.6 bits (83), Expect = 0.038
 Identities = 19/85 (22%), Positives = 35/85 (40%)
 Frame = +3

Query: 398 GXEVGDWVRSKPSLGNRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRKGKWITHYTDV 457
           G   GDWV  K                  + ++HS+   G + +     +  W  + +++
Sbjct: 120 GLGAGDWVHLKEE----------DEKHSPVGILHSINRDGRVTVGFIGLQTLWNGNSSEL 269

Query: 458 EKVPSFKVGQYVRFRPGLAEPRFGW 482
           E    + VGQ++R +  +  PRF W
Sbjct: 270 EMAEPYCVGQFIRLKTNVLSPRFEW 344


>TC213313 
          Length = 636

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = -2

Query: 457 VEKVPSFKVGQYVRFRPGLAEPRFGWGGAQPESQGIITNIHADGEVRVAFFGLSGL-WKG 515
           +E+V  FKVG  VR R GL  PR+GWG     S+G +  + A+G++R+ F    G  W G
Sbjct: 635 MERVRPFKVGDKVRIRDGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIG 456

Query: 516 DPSDLQAEQ 524
           DP+DL  ++
Sbjct: 455 DPADLALDE 429



 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -2

Query: 584 LERVDKLIVGQKVRVKQNVKQPRFGWSGHTHASIGTIQAIDADGKLWI-YTPAGSRTWML 642
           +ERV    VG KVR++  +  PR+GW   THAS G +  +DA+GKL I +     R W+ 
Sbjct: 635 MERVRPFKVGDKVRIRDGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIG 456

Query: 643 DPSEVEVVEE 652
           DP+++ + E+
Sbjct: 455 DPADLALDED 426



 Score = 38.9 bits (89), Expect = 0.008
 Identities = 26/78 (33%), Positives = 40/78 (50%), Gaps = 4/78 (5%)
 Frame = -2

Query: 137 MERVEEFKVGDWVRVRPTLTTSKHGLGNVVPGTIGIVYCIRPDSSLLVELSYVQ-NPWHC 195
           MERV  FKVGD VR+R  L T + G G     + G V  +  +  L ++  + +  PW  
Sbjct: 635 MERVRPFKVGDKVRIRDGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIG 456

Query: 196 EPEEI---EHVPPFRNLD 210
           +P ++   E    FRN++
Sbjct: 455 DPADLALDED*CCFRNME 402



 Score = 35.0 bits (79), Expect = 0.11
 Identities = 22/66 (33%), Positives = 35/66 (52%), Gaps = 1/66 (1%)
 Frame = -2

Query: 78  PLDRGQHVQLKGDVNEPRFGWRGQSRDSIGTVLCVDPEDGILRVGFP-GASRGWKADPAE 136
           P   G  V+++  +  PR+GW  ++  S G V+ VD  +G LR+ F     R W  DPA+
Sbjct: 620 PFKVGDKVRIRDGLVTPRWGWGMETHASKGQVVGVD-ANGKLRIKFRWREGRPWIGDPAD 444

Query: 137 MERVEE 142
           +   E+
Sbjct: 443 LALDED 426


>TC225614 UP|Q84ZV7 (Q84ZV7) R 12 protein, partial (88%)
          Length = 2367

 Score = 32.3 bits (72), Expect = 0.72
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +1

Query: 396  LPGXEVGDWVRSKPSLGNRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRKGKWITHY 454
            L G  V +W  +  +    PS +   + + S   +   Q + +L++ACCF+  KW   Y
Sbjct: 1168 LYGKTVAEWESALETYKRIPSNEILKILQVSFDALEEEQKNVFLDIACCFKGYKWTEVY 1344


>TC233085 similar to UP|Q86NU9 (Q86NU9) AT31631p, partial (10%)
          Length = 1179

 Score = 32.0 bits (71), Expect = 0.94
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
 Frame = +3

Query: 61  FCSGEVRVLTSEIVK--LIPLDRGQHVQLKGDVNEPRFGWRGQSRDSIGTVLCVDPEDGI 118
           FC  +V +L SE       P D  +H+     VN   F W   SR  +G + C   E  +
Sbjct: 663 FCFHDVDLLPSEPTNDYTYPSDGPRHLT----VNLQNFKWTTPSRTILGGITCATKEHLL 830

Query: 119 LRVGFPGASRGWKADPAEMER 139
           +  G+     GW A+  +  R
Sbjct: 831 MMNGWSNDFWGWGAEDEDAYR 893


>TC217708 similar to UP|O65896 (O65896) Cytidine deaminase 1  (At2g19570) ,
           partial (69%)
          Length = 954

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
 Frame = -2

Query: 463 FKVGQYVRFRPGLAEPRFGWGGAQPESQGIITNIHADGEVR-VAFFGLSGLWKGDPSDLQ 521
           F VG    F   LA    G GG   + QG    +   GEV     FG+ G+ +G+P +LQ
Sbjct: 362 FHVGGGAEFLEELAAVPAGGGG---DGQGHQVGLRIQGEVGDEELFGVDGVVEGEPRELQ 192

Query: 522 AEQIFEVGEWVRLKENVNNWKSIGPGSVGVVQGIGYEGGETDR 564
            +   +     +          +G G  G   G G +GGE  R
Sbjct: 191 VDADEDAAGGGQAH---GGHGELGDGGSGEGLGGGDQGGEEFR 72


>TC225612 homologue to UP|Q84ZU8 (Q84ZU8) R 10 protein, complete
          Length = 2706

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 15/53 (28%), Positives = 25/53 (46%)
 Frame = +1

Query: 398  GXEVGDWVRSKPSLGNRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRKGKW 450
            G  V +W  +       PS +   + + S   +   Q + +L++ACCFR  KW
Sbjct: 1189 GKTVAEWESAMEHYKRIPSDEILEILKVSFDALGEEQKNVFLDIACCFRGYKW 1347


>TC234424 
          Length = 579

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 308 WKRMAIWVLPFASEVSLFRARSLMWRKFLLLRW 340
           W R    V  F  E  LF+   +MWR F  L W
Sbjct: 245 WLRQRCGVFSFMVEGDLFQVNDIMWRDFRKLLW 343


>TC225611 homologue to UP|Q84ZU6 (Q84ZU6) R 1 protein, complete
          Length = 2709

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 14/53 (26%), Positives = 25/53 (46%)
 Frame = +1

Query: 398  GXEVGDWVRSKPSLGNRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRKGKW 450
            G  V +W  +       PS +   + + S   +   Q + +L++ACCF+  KW
Sbjct: 1189 GKTVAEWESAVEHYKRIPSDEILKILKVSFDALGEEQKNVFLDIACCFKGYKW 1347


>TC230883 UP|Q8LKR3 (Q8LKR3) Receptor-like kinase RHG4, complete
          Length = 3053

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 15/31 (48%), Positives = 19/31 (60%), Gaps = 4/31 (12%)
 Frame = +2

Query: 95  RFGW----RGQSRDSIGTVLCVDPEDGILRV 121
           RFGW    RG  R  +GT+LCV PE  +L +
Sbjct: 923 RFGWQSRGRGMIRVMVGTMLCVLPERLLLSI 1015


>TC233199 
          Length = 1105

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 38/152 (25%), Positives = 53/152 (34%), Gaps = 14/152 (9%)
 Frame = +2

Query: 506 FFGLSGLWKGDPSDLQAEQIFEVGEWVRLKEN----VNNWKSIGPGSV-------GVVQG 554
           F  L G WKGD   +    I+   + V LK N    +N  +S     +         V+ 
Sbjct: 149 FISLEGTWKGDGEKITIVNIYSPCD-VNLKRNLWGQINQLRSAS*NKLWCIVDDFNCVRR 325

Query: 555 IGYEGGETDRSTFVGFCGEQEKWVGPSSHLERVDKLIVGQK---VRVKQNVKQPRFGWSG 611
                G + R    G   E   W+     LE  D   VG K    R+K        GW G
Sbjct: 326 QSERVGASQREQGGGIMTEFNDWI---VDLEVEDMPSVGHKYTWYRLKS-------GWIG 475

Query: 612 HTHASIGTIQAIDADGKLWIYTPAGSRTWMLD 643
                 G +  ++     WI T   +  +MLD
Sbjct: 476 FLCLLNGFLNGVEVFNSYWIGTTQTTIQFMLD 571


>TC207488 similar to UP|Q9SJE0 (Q9SJE0) T27G7.21, partial (58%)
          Length = 955

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -1

Query: 506 FFGLSGLWKGDPSDLQAEQIFEVGEWVRLKEN----VNNWKSIG 545
           +FGL    KG  +++Q  ++     W R KEN    V+ WKS+G
Sbjct: 229 WFGLIHWVKGQRNNMQPMEMQTTWNWRR*KENGVV*VSRWKSVG 98


>TC207788 homologue to UP|Q8W2C0 (Q8W2C0) Functional candidate resistance
            protein KR1, complete
          Length = 3949

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 12/52 (23%), Positives = 25/52 (48%)
 Frame = +1

Query: 396  LPGXEVGDWVRSKPSLGNRPSYDWNSVGRESLAVVHSVQDSGYLELACCFRK 447
            L G  +  W+ +       P+ +   + + S   +   + S +L++ACCF+K
Sbjct: 1300 LSGKNIEQWISALDRYKRIPNKEIQEILKVSYDALEEDEQSIFLDIACCFKK 1455


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.328    0.144    0.480 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,018,389
Number of Sequences: 63676
Number of extensions: 583548
Number of successful extensions: 3292
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3289
length of query: 689
length of database: 12,639,632
effective HSP length: 104
effective length of query: 585
effective length of database: 6,017,328
effective search space: 3520136880
effective search space used: 3520136880
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)