BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141322.2 - phase: 0
(233 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG043254 32 8e-05
TC211111 homologue to UP|EBN2_EBV (P12978) EBNA-2 nuclear protei... 39 0.002
TC208071 UP|Q8GRZ5 (Q8GRZ5) Phosphoenolpyruvate carboxylase kina... 39 0.002
TC225230 similar to UP|Q9SZZ1 (Q9SZZ1) Fibrillarin-like protein ... 39 0.003
TC220766 homologue to UP|Q9Q5L3 (Q9Q5L3) EBNA-2, partial (4%) 38 0.003
TC230592 similar to UP|Q902U4 (Q902U4) Rev protein, partial (16%) 38 0.004
TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara... 38 0.004
TC216672 similar to UP|Q805X4 (Q805X4) Immediate early protein I... 37 0.006
TC227181 similar to UP|Q940N7 (Q940N7) AT4g05150/C17L7_70, parti... 37 0.006
TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 37 0.008
TC223353 weakly similar to UP|Q9SEW3 (Q9SEW3) Receptor-like prot... 37 0.008
TC221636 similar to UP|Q79G09 (Q79G09) PE-PGRS FAMILY PROTEIN, p... 37 0.008
BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvo... 37 0.010
TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein ... 37 0.010
TC232194 weakly similar to UP|Q9LSN6 (Q9LSN6) Arabidopsis thalia... 37 0.010
TC226993 homologue to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 deh... 37 0.010
TC204083 similar to UP|O48567 (O48567) Glycine-rich RNA-binding ... 37 0.010
TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 37 0.010
TC209672 similar to GB|AAM19966.1|20466089|AY098956 At2g32600/T2... 37 0.010
TC206525 weakly similar to UP|Q41042 (Q41042) Pisum sativum L. (... 37 0.010
>BG043254
Length = 421
Score = 32.3 bits (72), Expect(2) = 8e-05
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +2
Query: 4 SEQPTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPP 53
S++P +LP P+ P HP PP +PLP SHPPPPPP
Sbjct: 32 SQRPPTTLP-PLRPP------HPPPPP---RPLP-------QSHPPPPPP 130
Score = 30.4 bits (67), Expect(2) = 8e-05
Identities = 18/32 (56%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 46 SHPPPPPPQDVVDNHAPVRSRRR--GPPRNGP 75
SHPPPP PQ HA R RRR GPP P
Sbjct: 177 SHPPPPLPQ--AAGHALRRRRRRQAGPPEVCP 266
Score = 28.1 bits (61), Expect = 3.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAP 62
P+ Q+P P TL +P HPPPPP + + +H P
Sbjct: 14 PSHRSASQRP-PTTLPPLRPPHPPPPP-RPLPQSHPP 118
>TC211111 homologue to UP|EBN2_EBV (P12978) EBNA-2 nuclear protein, partial
(5%)
Length = 769
Score = 39.3 bits (90), Expect = 0.002
Identities = 25/71 (35%), Positives = 29/71 (40%)
Frame = +3
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P+ LP T R+ PN PP PLP PPPPP + + P RSR
Sbjct: 357 PSTQLPPSSSTTLHRISCVPNTPPPPPSPLP-----------PPPPPSPLTARNTP-RSR 500
Query: 67 RRGPPRNGPIP 77
R P P P
Sbjct: 501 LRTRPAQPPPP 533
>TC208071 UP|Q8GRZ5 (Q8GRZ5) Phosphoenolpyruvate carboxylase kinase, complete
Length = 1188
Score = 38.9 bits (89), Expect = 0.002
Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +2
Query: 11 LPL--PMLTPFQRMFAHPNIPP--LQQQPLP---LTLNIPQPSHPPPPPPQDVVDNHAPV 63
LPL P L P R+ H IPP L + PLP +++P S P PP N +
Sbjct: 80 LPLLPPTLQPTLRLQTHRQIPPP*LHRPPLPPERTQIHVPPLSSPQHPP------NLPCL 241
Query: 64 RSRRRGPPRNGPIPTP 79
R R RNGP+P P
Sbjct: 242 RGRPLSLHRNGPLPAP 289
>TC225230 similar to UP|Q9SZZ1 (Q9SZZ1) Fibrillarin-like protein (Fibrillarin
2) (AtFib2), partial (66%)
Length = 773
Score = 38.5 bits (88), Expect = 0.003
Identities = 20/42 (47%), Positives = 24/42 (56%), Gaps = 1/42 (2%)
Frame = -1
Query: 12 PLPMLTPFQRMFAHPNIPPLQQQPLPLTLN-IPQPSHPPPPP 52
P P L P + P PPL PLPL L+ +P P +PPPPP
Sbjct: 179 PPPPLPPPLALKGVPLSPPLPPPPLPLPLSPLPPPLNPPPPP 54
Score = 28.1 bits (61), Expect = 3.6
Identities = 23/71 (32%), Positives = 27/71 (37%), Gaps = 1/71 (1%)
Frame = -1
Query: 8 TQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIP-QPSHPPPPPPQDVVDNHAPVRSR 66
T +L P + P P PP PLP L + P PP PPP P+
Sbjct: 251 TTTLLPPFIPPLPPPRPPPLPPPRPPPPLPPPLALKGVPLSPPLPPPP------LPLPLS 90
Query: 67 RRGPPRNGPIP 77
PP N P P
Sbjct: 89 PLPPPLNPPPP 57
>TC220766 homologue to UP|Q9Q5L3 (Q9Q5L3) EBNA-2, partial (4%)
Length = 885
Score = 38.1 bits (87), Expect = 0.003
Identities = 18/56 (32%), Positives = 28/56 (49%), Gaps = 9/56 (16%)
Frame = +1
Query: 11 LPLPMLTPFQRMFAHPNIPPLQQQ---------PLPLTLNIPQPSHPPPPPPQDVV 57
+P P P ++ PN L QQ P+P+ L++P+ + PPPPPP +
Sbjct: 37 IPNPPFPPLHQILLPPNPTTLFQQ*SPFCPSLFPIPIHLHLPKRASPPPPPPLSTI 204
Score = 30.0 bits (66), Expect = 0.94
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +3
Query: 12 PLP-MLTPFQRMFAHPNIPPLQQQPLPLTLNIP-----QPSHPPPPPPQDVVDNHAPVRS 65
PLP ++T ++PN PP + T Q S PPPPPP N P
Sbjct: 96 PLPTIITILPLSLSNPNSPPSSKTRFTTTTTTTLHHQLQASPPPPPPPL----NPPPQGL 263
Query: 66 RRRGPPRNGP 75
+++ P + P
Sbjct: 264 KKKKRPNDAP 293
>TC230592 similar to UP|Q902U4 (Q902U4) Rev protein, partial (16%)
Length = 1282
Score = 37.7 bits (86), Expect = 0.004
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +1
Query: 9 QSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRR 68
QSLP P +PF +F ++PP +QP + ++P P+ P P PQ ++ P R +
Sbjct: 94 QSLPQPKSSPFSSLFQ--SLPP-PKQPSSESASLPNPNPNPNPKPQ--IEEPRPKRVVQF 258
Query: 69 GPPRNGPIPTP 79
PP P+P P
Sbjct: 259 RPPII-PLPNP 288
>TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (57%)
Length = 1652
Score = 37.7 bits (86), Expect = 0.004
Identities = 30/86 (34%), Positives = 38/86 (43%), Gaps = 11/86 (12%)
Frame = +3
Query: 3 DSEQPTQSLPLPMLTPFQRMFA-----HPNIPP----LQQQPLPLTLNIPQPSHPPPPPP 53
+ E P SLPLP+L+ +R HP+ L QPLPL HPP
Sbjct: 6 NEEPPLLSLPLPLLSLLRRRHRPRPQHHPHAGRTPRLLHLQPLPL-------RHPPGRRD 164
Query: 54 QDVVDNH--APVRSRRRGPPRNGPIP 77
Q D+H P + R PPR P+P
Sbjct: 165QPPPDHHRPGPRQCRHVLPPRQAPLP 242
Score = 29.6 bits (65), Expect = 1.2
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +2
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRR 67
P P + PL P P HPPPPPP P ++ R
Sbjct: 485 PTTSPSSKSAPPLAP--PTPRHPPPPPPPST*SPLCPNKAAR 604
Score = 25.0 bits (53), Expect(2) = 1.9
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +2
Query: 43 PQPSHPPPPPPQDVVDNHAPVR--SRRRGPPRNGPIPT 78
P S PP PPP + +P +R PP+ P+
Sbjct: 338 PPCSRPPAPPPAPPATSTSPTSRPARSASPPKTTTAPS 451
Score = 22.3 bits (46), Expect(2) = 1.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 9 QSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIP 43
Q PLP +R+ PP QQQ P L++P
Sbjct: 252 QKRPLPPHP--RRLLRRQKAPPDQQQHHPRLLHVP 350
>TC216672 similar to UP|Q805X4 (Q805X4) Immediate early protein ICP27,
partial (5%)
Length = 645
Score = 37.4 bits (85), Expect = 0.006
Identities = 24/66 (36%), Positives = 33/66 (49%), Gaps = 2/66 (3%)
Frame = +2
Query: 10 SLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIP-QPSH-PPPPPPQDVVDNHAPVRSRR 67
+LPLP L+P Q++ P +PPL Q P P +P P PPP + V+ S R
Sbjct: 407 TLPLPFLSPIQQVPPFPQLPPLTQTPRS*RRRPP*RPRRLLPHPPPTETVNRRFHSFSPR 586
Query: 68 RGPPRN 73
G R+
Sbjct: 587 LGTQRD 604
>TC227181 similar to UP|Q940N7 (Q940N7) AT4g05150/C17L7_70, partial (38%)
Length = 1611
Score = 37.4 bits (85), Expect = 0.006
Identities = 23/75 (30%), Positives = 34/75 (44%), Gaps = 2/75 (2%)
Frame = +2
Query: 4 SEQPTQSLPLPMLTPFQRMFAH--PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHA 61
S P + LP+ T +R H P + L ++ P L++ PPPPP+ A
Sbjct: 53 SNTPENDVTLPLPTRLRRRLRHLLPTLRSLPRRAAPHPLHVQLRRQDPPPPPR----QPA 220
Query: 62 PVRSRRRGPPRNGPI 76
P+R RR R P+
Sbjct: 221 PLRRRRHPHRRRQPL 265
>TC211031 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (11%)
Length = 678
Score = 37.0 bits (84), Expect = 0.008
Identities = 23/73 (31%), Positives = 28/73 (37%)
Frame = +3
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P P P L P P+ PP P+PL+ P P PPPP P + P
Sbjct: 207 PLPPSPPPPLPPSPPPPLPPSPPPPLPPPIPLSTPPPLPPSPPPPLPPSPSPPNLPSPPP 386
Query: 67 RRGPPRNGPIPTP 79
PP P+ P
Sbjct: 387 LAPPPPLPPLAPP 425
Score = 34.3 bits (77), Expect = 0.050
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 PLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPP-PPQDVVDNHAPVRSRRRGP 70
P+P+ P P +PP PLP + P P PPPP PP + P+ P
Sbjct: 183 PIPLAPP-------PPLPPSPPPPLPPSPPPPLPPSPPPPLPPPIPLSTPPPLPP--SPP 335
Query: 71 PRNGPIPTP 79
P P P+P
Sbjct: 336 PPLPPSPSP 362
Score = 31.6 bits (70), Expect = 0.32
Identities = 19/52 (36%), Positives = 23/52 (43%)
Frame = +3
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIP 77
P PP + P P+ L P P P PPPP + + P PP PIP
Sbjct: 150 PPPPPKECPPPPIPLAPPPPLPPSPPPP--LPPSPPPPLPPSPPPPLPPPIP 299
Score = 27.7 bits (60), Expect = 4.6
Identities = 20/63 (31%), Positives = 23/63 (35%), Gaps = 13/63 (20%)
Frame = +3
Query: 4 SEQPTQSLPLPMLTPFQRMFAHPNIPPLQQQPLP-------------LTLNIPQPSHPPP 50
S P P+P+ TP P +PP PLP L P P PP
Sbjct: 267 SPPPPLPPPIPLSTP-------PPLPPSPPPPLPPSPSPPNLPSPPPLAPPPPLPPLAPP 425
Query: 51 PPP 53
PPP
Sbjct: 426 PPP 434
>TC223353 weakly similar to UP|Q9SEW3 (Q9SEW3) Receptor-like protein kinase
(Fragment), partial (17%)
Length = 714
Score = 37.0 bits (84), Expect = 0.008
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Frame = -2
Query: 10 SLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPP-------------PPPPQDV 56
S +P + F + PN PP+ + P S PP PPP
Sbjct: 632 SSSVP*SSSFSLLLLRPNNPPI*TPTASTSSATPTLSPPPTPTPTCGSRAPRLPPPASSA 453
Query: 57 VDNHAPVRSRRRGPPRNGPIPTP 79
+H+P R+ RR PR+ P P+P
Sbjct: 452 AGSHSPSRTPRRS-PRSSPSPSP 387
>TC221636 similar to UP|Q79G09 (Q79G09) PE-PGRS FAMILY PROTEIN, partial (5%)
Length = 756
Score = 37.0 bits (84), Expect = 0.008
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1
Query: 12 PLPMLTPFQRMFAHPNIP--PLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRG 69
P P + P + + P +P P PLP P PS P P + AP + ++
Sbjct: 747 PSPKIPPKKAPISPPPLPLPPADAPPLPTPKVSPTPSKAPTP----AKETPAPAPAHKKK 580
Query: 70 PPRNGPIPTP 79
P++ P+P+P
Sbjct: 579 APKSSPVPSP 550
Score = 27.3 bits (59), Expect = 6.1
Identities = 23/69 (33%), Positives = 29/69 (41%), Gaps = 4/69 (5%)
Frame = -1
Query: 4 SEQPTQSLPLPMLTPFQRMFAHPNIP---PLQQQPLPL-TLNIPQPSHPPPPPPQDVVDN 59
S+ PT + P P + A + P PL P P T I P+ P P P+D
Sbjct: 639 SKAPTPAKETPAPAPAHKKKAPKSSPVPSPLSNTPTPAPTPAIETPT--PAPAPEDDTPP 466
Query: 60 HAPVRSRRR 68
P R RRR
Sbjct: 465 PPPHRHRRR 439
>BU765146 similar to GP|21322711|e pherophorin-dz1 protein {Volvox carteri f.
nagariensis}, partial (25%)
Length = 407
Score = 36.6 bits (83), Expect = 0.010
Identities = 25/73 (34%), Positives = 28/73 (38%)
Frame = -1
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P SLP P P P PPL P P P P PPPPPP + +
Sbjct: 392 PPSSLPSPPPPPPP---PPPPPPPLPPPPPPPPXPPPPPPPPPPPPPPPLSPPSLXLSPP 222
Query: 67 RRGPPRNGPIPTP 79
+ PP P P P
Sbjct: 221 *KTPPPPPPPPPP 183
Score = 34.7 bits (78), Expect = 0.038
Identities = 23/73 (31%), Positives = 27/73 (36%)
Frame = -3
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P SL P+ P P PP P P P P PPPPPP + +
Sbjct: 399 PPSSLLPPLPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPLPPLPXSLSPL 220
Query: 67 RRGPPRNGPIPTP 79
+ PP P P P
Sbjct: 219 KNPPPPPPPPPPP 181
Score = 34.3 bits (77), Expect = 0.050
Identities = 24/73 (32%), Positives = 27/73 (36%)
Frame = -1
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P S P L+P + P PP P P P P PPPPPP P+
Sbjct: 260 PPLSPPSLXLSPP*KTPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPSPPLPPP 81
Query: 67 RRGPPRNGPIPTP 79
PP P P P
Sbjct: 80 PPPPPPPPPPPPP 42
Score = 33.9 bits (76), Expect = 0.065
Identities = 23/73 (31%), Positives = 26/73 (35%)
Frame = -2
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P S P P + + P PP P P +P P PPPPPP P
Sbjct: 262 PPPSPPPPXXSLPPKKPPPPPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPPPPPSPP 83
Query: 67 RRGPPRNGPIPTP 79
PP P P P
Sbjct: 82 PPPPPPPPPPPPP 44
Score = 33.1 bits (74), Expect = 0.11
Identities = 19/54 (35%), Positives = 20/54 (36%)
Frame = -3
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
P PP P P P P PPPPPP + P PP P P P
Sbjct: 192 PPPPPPPPPPPPFPPPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPPPPPPP 31
Score = 33.1 bits (74), Expect = 0.11
Identities = 24/73 (32%), Positives = 26/73 (34%)
Frame = -2
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P LP P P P PP P P P P PPPPPP +P
Sbjct: 403 PPPLLPPPSPPPPPPPPPPPPPPPPSPLPPPPPPXPPPPPPPPPPPPPP----PSPPPPX 236
Query: 67 RRGPPRNGPIPTP 79
PP+ P P P
Sbjct: 235 XSLPPKKPPPPPP 197
Score = 33.1 bits (74), Expect = 0.11
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -1
Query: 31 LQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
L P P +L P P PPPPPP + P PP P P P
Sbjct: 407 LPPPPPPSSLPSPPPPPPPPPPPPPPLPPPPPPPPXPPPPPPPPPPPPP 261
Score = 32.7 bits (73), Expect = 0.14
Identities = 19/54 (35%), Positives = 20/54 (36%)
Frame = -1
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
P PP P P P P PPPPPP + P PP P P P
Sbjct: 185 PPPPPPPPPPSPPPPPPPPPPPPPPPPPSPPLPPPPPPPPPPPPPPPPPPPPPP 24
Score = 32.3 bits (72), Expect = 0.19
Identities = 26/73 (35%), Positives = 27/73 (36%)
Frame = -2
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P SLP P P P PP PLP P P PPPPPP + P
Sbjct: 241 PXXSLP-PKKPPPPPPPPPPPPPPPPPPPLPPPPP-PPPPPPPPPPPPPPPPSPPPPPPP 68
Query: 67 RRGPPRNGPIPTP 79
PP P P P
Sbjct: 67 PPPPPPPPPPPPP 29
Score = 32.0 bits (71), Expect = 0.25
Identities = 23/73 (31%), Positives = 25/73 (33%)
Frame = -3
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P PLP L +P PP P P P PPPPPP P+
Sbjct: 270 PPPPPPLPPLPXSLSPLKNPPPPPPPPPPPPPPPPPPPFPPPPPPPPPPPPPPPPPLPPP 91
Query: 67 RRGPPRNGPIPTP 79
PP P P P
Sbjct: 90 PPPPPPPPPPPPP 52
Score = 32.0 bits (71), Expect = 0.25
Identities = 18/54 (33%), Positives = 25/54 (45%)
Frame = -3
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
P+ PP P P P P PPPPP + + +P+++ PP P P P
Sbjct: 324 PSPPPPPPPPPPPP---PPPPPPPPPPLPPLPXSLSPLKNPPPPPPPPPPPPPP 172
Score = 31.6 bits (70), Expect = 0.32
Identities = 19/54 (35%), Positives = 20/54 (36%)
Frame = -3
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
P PP P P P P PPPPPP + P PP P P P
Sbjct: 195 PPPPPPPPPPPPPFPPPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPPPPPP 34
Score = 31.6 bits (70), Expect = 0.32
Identities = 16/46 (34%), Positives = 19/46 (40%)
Frame = -1
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPP 71
P PP P P + +P P PPPPPP P + PP
Sbjct: 140 PPPPPPPPPPPPPSPPLPPPPPPPPPPPPPPPPPPPPPPPGQTSPP 3
Score = 31.2 bits (69), Expect = 0.42
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = -2
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
P PP P P P P PPPPPP + ++ PP P P P
Sbjct: 325 PLPPPPPPXPPP-----PPPPPPPPPPPPSPPPPXXSLPPKKPPPPPPPPPPPP 179
Score = 30.0 bits (66), Expect = 0.94
Identities = 22/73 (30%), Positives = 26/73 (35%)
Frame = -1
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P P P L+P + P P P P P P P PPPP P
Sbjct: 281 PPPPPPPPPLSPPSLXLSPP*KTPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPP---- 114
Query: 67 RRGPPRNGPIPTP 79
PP + P+P P
Sbjct: 113 --PPPPSPPLPPP 81
Score = 29.6 bits (65), Expect = 1.2
Identities = 18/54 (33%), Positives = 20/54 (36%)
Frame = -2
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
P PP P P P P PPPP P + P + PP P P P
Sbjct: 316 PPPPPXPPPPPP-----PPPPPPPPPSPPPPXXSLPPKKPPPPPPPPPPPPPPP 170
Score = 29.6 bits (65), Expect = 1.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -3
Query: 29 PPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
PP LP P P PPPPPP P PP P P P
Sbjct: 405 PPPPSSLLPPLPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPP 253
Score = 29.6 bits (65), Expect = 1.2
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = -3
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P P P L P + PP P P P P PPPPP P
Sbjct: 279 PPPPPPPPPLPPLPXSLSPLKNPPPPPPPPPPPPPPPPPPPFPPPPPPPPPPPPPPPPPL 100
Query: 67 RRGPPRNGPIPTP 79
PP P P P
Sbjct: 99 PPPPPPPPPPPPP 61
>TC224546 similar to UP|Q41707 (Q41707) Extensin class 1 protein precursor,
partial (67%)
Length = 1240
Score = 36.6 bits (83), Expect = 0.010
Identities = 22/71 (30%), Positives = 25/71 (34%)
Frame = +3
Query: 9 QSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRR 68
QS P P P + H PP P P P P P PPPP +
Sbjct: 57 QSPPPPSPIPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPY-----------YYK 203
Query: 69 GPPRNGPIPTP 79
PP P+P P
Sbjct: 204 SPPPPSPVPKP 236
Score = 34.3 bits (77), Expect = 0.050
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Frame = +3
Query: 9 QSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRS--- 65
+S P P +P + H PP P P + P P P PPPP P S
Sbjct: 585 KSPPPPSPSPPPPYYYHSPPPPSPSPPPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPP 764
Query: 66 --RRRGPPRNGPIPTP 79
+ PP P P P
Sbjct: 765 PYYYQSPPPPSPTPHP 812
Score = 33.5 bits (75), Expect = 0.085
Identities = 22/79 (27%), Positives = 28/79 (34%), Gaps = 7/79 (8%)
Frame = +3
Query: 10 SLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDN-------HAP 62
S P P +P + H PP P P P P P PPPP H P
Sbjct: 636 SPPPPSPSPPPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYQSPPPPSPTPHPP 815
Query: 63 VRSRRRGPPRNGPIPTPFI 81
+ PP + P P ++
Sbjct: 816 YYYKSPPPPTSHPPPYHYV 872
Score = 33.5 bits (75), Expect = 0.085
Identities = 21/71 (29%), Positives = 24/71 (33%)
Frame = +3
Query: 9 QSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRR 68
+S P P P + H PP P P P P P PPPP +
Sbjct: 297 KSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPY-----------YYK 443
Query: 69 GPPRNGPIPTP 79
PP P P P
Sbjct: 444 SPPPPSPSPPP 476
Score = 31.2 bits (69), Expect = 0.42
Identities = 20/71 (28%), Positives = 26/71 (36%)
Frame = +3
Query: 9 QSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRR 68
+S P P +P + H PP + P + P P P PPPP +
Sbjct: 441 KSPPPPSPSPPPPYYYHSPPPPKEHVHPPYYYHSPPPPSPSPPPPY-----------YYK 587
Query: 69 GPPRNGPIPTP 79
PP P P P
Sbjct: 588 SPPPPSPSPPP 620
Score = 30.8 bits (68), Expect = 0.55
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Frame = +3
Query: 9 QSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRR 68
+S P P P + H PP P P P P P P PP H+P
Sbjct: 201 KSPPPPSPVPKPPYYYHSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYY---HSPPPPSPS 371
Query: 69 GPP----RNGPIPTP 79
PP ++ P P+P
Sbjct: 372 PPPPYYYKSPPPPSP 416
Score = 30.8 bits (68), Expect = 0.55
Identities = 22/74 (29%), Positives = 29/74 (38%), Gaps = 4/74 (5%)
Frame = +3
Query: 10 SLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRG 69
S P P +P + PP P P + P P P PPPP H+P
Sbjct: 540 SPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYHSPPPPSPSPPPPYYY---HSPPPPSPSP 710
Query: 70 PP----RNGPIPTP 79
PP ++ P P+P
Sbjct: 711 PPPYYYKSPPPPSP 752
Score = 30.0 bits (66), Expect = 0.94
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Frame = +3
Query: 23 FAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPP----RNGPIPT 78
+ H PP P P P P P PPPP H+P PP + P P+
Sbjct: 531 YYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYY---HSPPPPSPSPPPPYYYHSPPPPS 701
Query: 79 P 79
P
Sbjct: 702 P 704
Score = 29.6 bits (65), Expect = 1.2
Identities = 21/71 (29%), Positives = 24/71 (33%)
Frame = +3
Query: 9 QSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRR 68
QS P P TP + PP P ++ P PS PPPP
Sbjct: 777 QSPPPPSPTPHPPYYYKSPPPPTSHPPPYHYVSPPPPSPSPPPP------------YHYT 920
Query: 69 GPPRNGPIPTP 79
PP P P P
Sbjct: 921 SPPPPSPAPAP 953
Score = 29.6 bits (65), Expect = 1.2
Identities = 22/78 (28%), Positives = 26/78 (33%), Gaps = 8/78 (10%)
Frame = +3
Query: 10 SLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRR-- 67
S P P +P + PP P P P P P PPPP H+P +
Sbjct: 348 SPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYY---HSPPPPKEHV 518
Query: 68 ------RGPPRNGPIPTP 79
PP P P P
Sbjct: 519 HPPYYYHSPPPPSPSPPP 572
Score = 28.5 bits (62), Expect = 2.7
Identities = 19/71 (26%), Positives = 25/71 (34%)
Frame = +3
Query: 9 QSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRR 68
+S P P +P + PP P + P P P PPPP +
Sbjct: 153 KSPPPPSPSPPPPYYYKSPPPPSPVPKPPYYYHSPPPPSPSPPPPY-----------YYK 299
Query: 69 GPPRNGPIPTP 79
PP P+P P
Sbjct: 300 SPPPPSPVPKP 332
>TC232194 weakly similar to UP|Q9LSN6 (Q9LSN6) Arabidopsis thaliana genomic
DNA, chromosome 3, TAC clone:K14A17, partial (40%)
Length = 550
Score = 36.6 bits (83), Expect = 0.010
Identities = 24/68 (35%), Positives = 28/68 (40%)
Frame = -2
Query: 12 PLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPP 71
PLPM P PP PLP L IP P PPPP + P+ + PP
Sbjct: 441 PLPMPVP----------PPP*PVPLPTPLPIPTPRPCPPPP*TPPLPLPEPIPTPEPPPP 292
Query: 72 RNGPIPTP 79
P+P P
Sbjct: 291 FPIPLPPP 268
Score = 28.5 bits (62), Expect = 2.7
Identities = 18/52 (34%), Positives = 25/52 (47%), Gaps = 2/52 (3%)
Frame = -2
Query: 30 PLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPR--NGPIPTP 79
P ++ P PL L+ P P PPPP + P+ + R PP P+P P
Sbjct: 477 PAKRPPPPLLLS-PLPMPVPPPP*PVPLPTPLPIPTPRPCPPPP*TPPLPLP 325
>TC226993 homologue to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase
(GDP-D-mannose dehydratase) (GMD) , partial (94%)
Length = 1388
Score = 36.6 bits (83), Expect = 0.010
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +2
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQ-PSHPPPPPPQDVVDNHAPVRS 65
PT+S P+ +P PP P P + P P+ PPP P AP R
Sbjct: 374 PTRSTTSPLSLTSPSPSRYPTTPPTSSPPAPSASSRPSVPTSPPPAAPTSATTKPAPPRC 553
Query: 66 RRRGPPRNGPIPTP 79
P R P P P
Sbjct: 554 -SAPPLRRSPKPPP 592
>TC204083 similar to UP|O48567 (O48567) Glycine-rich RNA-binding protein,
partial (95%)
Length = 1019
Score = 36.6 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -3
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQ 54
P PL + P +R P PP PLP P P PPPPPP+
Sbjct: 447 PPPPPPLRLYPPSRRPPYPPPPPPPPYPPLPRLYPPPLPKPPPPPPPR 304
Score = 32.3 bits (72), Expect = 0.19
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -3
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
P PP PL L +P +PPPPPP P R PP P P P
Sbjct: 459 PPYPPPPPPPLRLYPPSRRPPYPPPPPPPPY-----PPLPRLYPPPLPKPPPPP 313
Score = 29.3 bits (64), Expect = 1.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 45 PSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
PS PPP PP++ + +P R PP P P P
Sbjct: 534 PSDPPPSPPRE*REPPSPP*PRSLPPPYPPPPPPP 430
>TC214106 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (22%)
Length = 1296
Score = 36.6 bits (83), Expect = 0.010
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Frame = +1
Query: 4 SEQPTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHP-----PPPPPQDVVD 58
S P P P + P+ + P PP+ P P+ P P P PPPPP ++
Sbjct: 247 SPPPPPPSPPPPVYPY---LSPPPPPPVHSPPPPVYSPPPPPPSPPPCIEPPPPPPPCIE 417
Query: 59 NHAPVRS----RRRGPPRNGPIPTPF 80
P S PP P P P+
Sbjct: 418 PPPPPPSPPPCEEHSPPPPSPHPAPY 495
Score = 35.0 bits (79), Expect = 0.029
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
Frame = +1
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPP---PPPQDVVDNH---------APVRSRRRGPPRN 73
P+ PP ++ P P P HPPP PPP V N PV PP +
Sbjct: 433 PSPPPCEEHSPPPPSPHPAPYHPPPSPSPPPPPVQYNSPPPPSPPPPTPVYHYNSPPPPS 612
Query: 74 GPIPTP 79
P PTP
Sbjct: 613 FPPPTP 630
Score = 32.7 bits (73), Expect = 0.14
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = +1
Query: 12 PLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPP 71
P P+ +P + + + PP Q P P P H PPPPP P S PP
Sbjct: 154 PPPVFSPPPPVQYYYSSPPPPQHSPP-----PPPPHSPPPPPPSPPPPVYPYLSPPPPPP 318
Query: 72 RNGPIP 77
+ P P
Sbjct: 319 VHSPPP 336
Score = 32.3 bits (72), Expect = 0.19
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Frame = +1
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P S P P +P + P PP + P P P H PPPP H P
Sbjct: 337 PVYSPPPPPPSPPPCIEPPPPPPPCIEPPPPPPSPPPCEEHSPPPPSPHPAPYHPPPSPS 516
Query: 67 RRGPP---RNGPIPTP 79
PP + P P+P
Sbjct: 517 PPPPPVQYNSPPPPSP 564
Score = 32.3 bits (72), Expect = 0.19
Identities = 19/58 (32%), Positives = 25/58 (42%)
Frame = +1
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTPFIWA 83
P PP P P+ P P PPPP P V + P PP + P P P +++
Sbjct: 10 PPSPPPPSPPPPVYSPPPPPPSPPPPSPTYCVRSPPPPSP----PPPSPPPPPPPVFS 171
Score = 31.6 bits (70), Expect = 0.32
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +1
Query: 18 PFQRMFAHPNIPPLQQQPLPLTLNIPQPSHP-PPPPPQDVVDNHAPVRSRRRGPPRNGPI 76
P Q ++ P PP Q P P + P P P PPPP + P PP P
Sbjct: 181 PVQYYYSSP--PPPQHSPPPPPPHSPPPPPPSPPPPVYPYLSPPPPPPVHSPPPPVYSPP 354
Query: 77 PTP 79
P P
Sbjct: 355 PPP 363
Score = 31.6 bits (70), Expect = 0.32
Identities = 17/51 (33%), Positives = 20/51 (38%)
Frame = +1
Query: 29 PPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
PP P P P P PPPP Q + P + PP + P P P
Sbjct: 112 PPPPSPPPPSPPPPPPPVFSPPPPVQYYYSSPPPPQHSPPPPPPHSPPPPP 264
Score = 30.8 bits (68), Expect = 0.55
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 25 HPNIPPLQQQPLPLTLNIPQPSHP--PPPPPQDVVDNHAPVRSRRRGPPRNGPIPTPFI 81
H PP P P + P P +P PPPP V PV S PP P P P I
Sbjct: 220 HSPPPPPPHSPPPPPPSPPPPVYPYLSPPPPPPVHSPPPPVYS----PPPPPPSPPPCI 384
Score = 30.8 bits (68), Expect = 0.55
Identities = 28/89 (31%), Positives = 35/89 (38%), Gaps = 16/89 (17%)
Frame = +1
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPL--TLNIPQPSHPPP---PPPQDVVDNHA 61
P S P P +P +++ P PP P P + P PS PPP PPP V
Sbjct: 7 PPPSPPPP--SPPPPVYSPPPPPPSPPPPSPTYCVRSPPPPSPPPPSPPPPPPPVFSPPP 180
Query: 62 PVR-----------SRRRGPPRNGPIPTP 79
PV+ S PP + P P P
Sbjct: 181PVQYYYSSPPPPQHSPPPPPPHSPPPPPP 267
Score = 27.3 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 43 PQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
P P PPPP P V + P PP + P P+P
Sbjct: 4 PPPPSPPPPSPPPPVYSPPP-------PPPSPPPPSP 93
>TC209672 similar to GB|AAM19966.1|20466089|AY098956 At2g32600/T26B15.16
{Arabidopsis thaliana;} , partial (25%)
Length = 682
Score = 36.6 bits (83), Expect = 0.010
Identities = 29/84 (34%), Positives = 39/84 (45%), Gaps = 2/84 (2%)
Frame = +3
Query: 4 SEQPTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPV 63
S+ P + P P T A +PP +PLP PQ PPPPPP + AP+
Sbjct: 135 SKPPEANKPQPATTA--NGTAPSGVPP---RPLPPP---PQGPLPPPPPPPQGLPPGAPM 290
Query: 64 RSRRRG--PPRNGPIPTPFIWATD 85
+ R PP G +P P + AT+
Sbjct: 291 ANPPRAPPPPMPGSMPPPPMAATN 362
>TC206525 weakly similar to UP|Q41042 (Q41042) Pisum sativum L. (clone
na-481-5), partial (20%)
Length = 752
Score = 36.6 bits (83), Expect = 0.010
Identities = 23/64 (35%), Positives = 27/64 (41%), Gaps = 3/64 (4%)
Frame = -3
Query: 19 FQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNH---APVRSRRRGPPRNGP 75
F R P +PP +P PL N P P PP PP + N P+ R PP P
Sbjct: 468 FPRPLPPPPLPP--NRPPPLPPNRPPPPLPPNRPPPPLAPNRPPPPPLAPNRPPPPLLPP 295
Query: 76 IPTP 79
P P
Sbjct: 294 APLP 283
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.323 0.139 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,241,540
Number of Sequences: 63676
Number of extensions: 371541
Number of successful extensions: 11198
Number of sequences better than 10.0: 897
Number of HSP's better than 10.0 without gapping: 5481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7671
length of query: 233
length of database: 12,639,632
effective HSP length: 94
effective length of query: 139
effective length of database: 6,654,088
effective search space: 924918232
effective search space used: 924918232
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)
Medicago: description of AC141322.2