BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141114.10 + phase: 0
(710 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC231130 296 2e-80
TC213660 205 5e-53
TC219149 weakly similar to UP|SR40_YEAST (P32583) Suppressor pro... 201 7e-52
BE555370 178 6e-45
CO980225 138 7e-33
TC230468 similar to UP|Q9FHS2 (Q9FHS2) Gb|AAF03435.1, partial (11%) 125 8e-29
BM528484 122 7e-28
BG237182 93 4e-19
TC217235 similar to UP|Q9LW88 (Q9LW88) Arabidopsis thaliana geno... 39 0.010
TC209454 weakly similar to PIR|T01524|T01524 zinc finger protein... 35 0.11
TC205125 similar to UP|HAT9_ARATH (P46603) Homeobox-leucine zipp... 34 0.20
TC231230 weakly similar to GB|CAA65563.1|1403551|SCLACHXVI P2570... 32 0.74
TC216649 weakly similar to UP|Q840B9 (Q840B9) Endo-b1,4-mannanas... 32 0.74
TC203315 homologue to UP|Q9M3H6 (Q9M3H6) Histone H2B, complete 32 1.3
TC224938 similar to GB|AAS75312.1|45680886|AY568529 multidomain ... 32 1.3
TC224795 weakly similar to UP|Q9FF10 (Q9FF10) Similarity to hepa... 32 1.3
CO985236 31 1.7
TC227625 31 2.2
BU765158 30 2.8
TC206585 similar to UP|Q6NKN2 (Q6NKN2) At3g23540, partial (24%) 30 2.8
>TC231130
Length = 899
Score = 296 bits (759), Expect = 2e-80
Identities = 150/183 (81%), Positives = 158/183 (85%), Gaps = 1/183 (0%)
Frame = +3
Query: 529 GEQKSFALLNDLSDLLMLPKDMLMDRQVSQEVCPSISLSLIIRVLCNFTPDEFCPDAVPG 588
GE KSF LLNDLSDLLMLPKDML+DR + QEVCP+I LSLIIRVLCNFTPDEFCPD VPG
Sbjct: 6 GEPKSFVLLNDLSDLLMLPKDMLIDRNIRQEVCPTIILSLIIRVLCNFTPDEFCPDPVPG 185
Query: 589 AVLEALNGETIVERRMSAESIRSFPYSAAPVVYMPPSSVNVAEKVAEAGGKCHLTRNVSA 648
VLEALN ETI+ERR+SAES RSFPY A PVVYM PSS NVAEKVAE GK HL RNVSA
Sbjct: 186 TVLEALNAETIIERRLSAESARSFPYVAEPVVYMAPSSANVAEKVAETEGKSHLARNVSA 365
Query: 649 VQRRGYTSDEELEELDSPLSSIIDKVPSSPTVATNGNG-NHEEQGSQTTTNARYQLLREV 707
VQRRGYTSDEELEELDSPL+ IIDK+PSSPTV NG G NH+EQG TTNARYQLLREV
Sbjct: 366 VQRRGYTSDEELEELDSPLTFIIDKLPSSPTVTENGKGNNHKEQGGNPTTNARYQLLREV 545
Query: 708 WSM 710
WSM
Sbjct: 546 WSM 554
>TC213660
Length = 582
Score = 205 bits (522), Expect = 5e-53
Identities = 98/150 (65%), Positives = 121/150 (80%)
Frame = +1
Query: 336 WQETGTFTLALERVESWIFSRLVESVWWQALTPYMQSSVGDSCSNKSAGRLLGPALGDHN 395
W++ TF +ALE+VE+WIFSR+VESVWWQ LTPYMQS+ + S++ A +GD +
Sbjct: 136 WEDPETFLVALEKVEAWIFSRIVESVWWQTLTPYMQSAAAKNSSSRKAYERRY-RVGDQD 312
Query: 396 QGNFSINLWRNAFQDAFQRLCPLRAGGHECGCLPVMARMVMEQCIDRLDVAMFNAILRES 455
QG+FSI+LW+ AF+DA +R+CPLRAGGHECGCL V+AR+VMEQ + RLDVAMFNAILRES
Sbjct: 313 QGSFSIDLWKRAFKDACERICPLRAGGHECGCLLVIARLVMEQLVSRLDVAMFNAILRES 492
Query: 456 ALEIPTDPISDPIVDSKVLPIPAGNLSFGS 485
A E+P DPISDPI DS VLPIPAG FG+
Sbjct: 493 AEEMPMDPISDPISDSMVLPIPAGKSGFGA 582
>TC219149 weakly similar to UP|SR40_YEAST (P32583) Suppressor protein SRP40,
partial (8%)
Length = 1158
Score = 201 bits (512), Expect = 7e-52
Identities = 111/244 (45%), Positives = 153/244 (62%), Gaps = 2/244 (0%)
Frame = +1
Query: 467 PIVDSKVLPIPAGNLSFGSGAQLKNSVGNWSRLLTDMFGIDAEDCSEEYPENS--ENDER 524
P+V + P N FG+GAQLK ++GNWSR LT +FG+D +D E+ +N NDE
Sbjct: 163 PLVIPRFSPFHLVNQGFGAGAQLKTAIGNWSRWLTGLFGMDDDDPLEDIDDNDLDSNDES 342
Query: 525 RGGPGEQKSFALLNDLSDLLMLPKDMLMDRQVSQEVCPSISLSLIIRVLCNFTPDEFCPD 584
+ KSF LLN LSDLLMLPKDML++ + +EVCP S SLI ++L NF PDEFCPD
Sbjct: 343 QN---TFKSFHLLNALSDLLMLPKDMLLNASIRKEVCPMFSASLIKKILDNFVPDEFCPD 513
Query: 585 AVPGAVLEALNGETIVERRMSAESIRSFPYSAAPVVYMPPSSVNVAEKVAEAGGKCHLTR 644
+P V EAL+ + +E ESI +FP +AAP Y PP + + E G + L R
Sbjct: 514 PIPTDVFEALDSQDDLED--ENESISNFPCNAAPTAYSPPPAATITNITGEFGSESQLRR 687
Query: 645 NVSAVQRRGYTSDEELEELDSPLSSIIDKVPSSPTVATNGNGNHEEQGSQTTTNARYQLL 704
+ S+V R+ YTSD+EL+E++ PLSSI++ SSP + N + + S+ + RY+LL
Sbjct: 688 SKSSVVRKSYTSDDELDEINYPLSSILNSGSSSP---ASSKPNWKWKDSRDESAVRYELL 858
Query: 705 REVW 708
R+VW
Sbjct: 859 RDVW 870
Score = 106 bits (265), Expect = 3e-23
Identities = 50/77 (64%), Positives = 58/77 (74%)
Frame = +3
Query: 415 LCPLRAGGHECGCLPVMARMVMEQCIDRLDVAMFNAILRESALEIPTDPISDPIVDSKVL 474
LCP+RAGGHECG L V+ +++MEQC+ RLDVAMFNAILRES +IPTDP+SDPI D KVL
Sbjct: 6 LCPIRAGGHECGFLSVLPKLIMEQCVARLDVAMFNAILRESDDDIPTDPVSDPISDPKVL 185
Query: 475 PIPAGNLSFGSGAQLKN 491
PIP G KN
Sbjct: 186 PIPPGQSRLWGWCTAKN 236
>BE555370
Length = 280
Score = 178 bits (452), Expect = 6e-45
Identities = 85/93 (91%), Positives = 91/93 (97%)
Frame = +2
Query: 414 RLCPLRAGGHECGCLPVMARMVMEQCIDRLDVAMFNAILRESALEIPTDPISDPIVDSKV 473
RLCP+RAGGHECGCLPV+ARMVMEQCI RLDVAMFNA+LRESALEIPTDPISDPIV+SKV
Sbjct: 2 RLCPVRAGGHECGCLPVLARMVMEQCIARLDVAMFNALLRESALEIPTDPISDPIVNSKV 181
Query: 474 LPIPAGNLSFGSGAQLKNSVGNWSRLLTDMFGI 506
LPIPAG+LSFGSGAQLKNSVGNWSR LTDMFG+
Sbjct: 182 LPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGM 280
>CO980225
Length = 806
Score = 138 bits (348), Expect = 7e-33
Identities = 93/218 (42%), Positives = 122/218 (55%), Gaps = 2/218 (0%)
Frame = -1
Query: 493 VGNWSRLLTDMFGIDAEDCSEEYPENSENDERRGGPGEQKSFALLNDLSDLLMLPKDMLM 552
+G+WSR L+D+F ID D E +EN+E + P K F LN LSDL+MLP DML
Sbjct: 692 IGDWSRWLSDLFSIDDSDSREVI---NENNEPKCEPSF-KPFQFLNALSDLMMLPLDMLA 525
Query: 553 DRQVSQEVCPSISLSLIIRVLCNFTPDEFCPDAVPGAVLEALNGETIVERRMSAESIRSF 612
D + +EVCP +SL+ RV+ NF PDEF P +P AV EAL+ E I + +I SF
Sbjct: 524 DGSMRKEVCPKFGISLMKRVVYNFVPDEFSPGPIPDAVFEALD-EDIED---DEGAITSF 357
Query: 613 PYSAAPVVYMPPSSVNVAEKVAEAGGKCHLTRNVSAVQRRGYTSDEELEELDSPLSSI-- 670
P SA Y PP + +V + E G K L R+ S V ++ YTSD+EL+ELDSPLS++
Sbjct: 356 PCSAGSTFYEPPPASSVVGMLQEVGTKTSL-RSGSFVLKKLYTSDDELDELDSPLSALGM 180
Query: 671 IDKVPSSPTVATNGNGNHEEQGSQTTTNARYQLLREVW 708
D S + G RY+LLRE W
Sbjct: 179 DDSSLLSKELVKGGR-----------KVVRYELLREAW 99
>TC230468 similar to UP|Q9FHS2 (Q9FHS2) Gb|AAF03435.1, partial (11%)
Length = 707
Score = 125 bits (313), Expect = 8e-29
Identities = 82/193 (42%), Positives = 107/193 (54%), Gaps = 2/193 (1%)
Frame = +1
Query: 518 NSENDERRGGPGEQKSFALLNDLSDLLMLPKDMLMDRQVSQEVCPSISLSLIIRVLCNFT 577
+ EN+E + K F LN LSDL+MLP DML D + +EVCP +SLI RV+ NF
Sbjct: 7 SXENNESKX-ESSFKPFQFLNALSDLMMLPLDMLADGSMIKEVCPKFGISLIKRVVYNFV 183
Query: 578 PDEFCPDAVPGAVLEALNGETIVERRMSAESIRSFPYSAAPVVYMPPSSVNVAEKVAEAG 637
PDEF P +P AV +AL+ E I + +I SFP A +Y PP + +V K+ E G
Sbjct: 184 PDEFSPGPIPDAVYDALDNEDIQD---GEGAITSFPCPAGFTLYAPPPASSVVGKLQEVG 354
Query: 638 GKCHLTRNVSAVQRRGYTSDEELEELDSPLSSI--IDKVPSSPTVATNGNGNHEEQGSQT 695
K L R S V ++ YTSD+EL+ELDSPLS++ D SS G +
Sbjct: 355 NKTSL-RTGSFVLKKLYTSDDELDELDSPLSALGMDDSSLSSKEKLALVKGGRKV----- 516
Query: 696 TTNARYQLLREVW 708
RY+LLRE W
Sbjct: 517 ---VRYELLREAW 546
>BM528484
Length = 427
Score = 122 bits (305), Expect = 7e-28
Identities = 65/137 (47%), Positives = 85/137 (61%)
Frame = +3
Query: 559 EVCPSISLSLIIRVLCNFTPDEFCPDAVPGAVLEALNGETIVERRMSAESIRSFPYSAAP 618
EVCP + +LI ++L NF PDE CPD VP V EALN E +E E + +FP AAP
Sbjct: 6 EVCPMFNATLIKKILDNFVPDELCPDPVPSNVFEALNSENEMED--GKEYVNNFPCIAAP 179
Query: 619 VVYMPPSSVNVAEKVAEAGGKCHLTRNVSAVQRRGYTSDEELEELDSPLSSIIDKVPSSP 678
+ Y PP + ++A V E G K L RN S+V R+ +TSD+EL+EL SPLSSI V SSP
Sbjct: 180 IAYSPPPATSIASIVGEIGSKSQLRRNKSSVVRKSHTSDDELDELKSPLSSIFFSVSSSP 359
Query: 679 TVATNGNGNHEEQGSQT 695
V T + +E +Q+
Sbjct: 360 KVLTKSSLKFKEIRNQS 410
>BG237182
Length = 422
Score = 93.2 bits (230), Expect = 4e-19
Identities = 58/143 (40%), Positives = 82/143 (56%)
Frame = +2
Query: 112 NTKPVKVPAKVSSESSEGVDEKPVIEVKEIEILDGSSNGAQSVGSEDEIHEIVNAEENGE 171
NTK V++P D E+ E IL + N + + ++ +I+ E
Sbjct: 38 NTKSVRLPG----------DSVRNAELNENGILGDAQNSSGNRSNDRRDSKILAKEIRSG 187
Query: 172 GEDGAAMKSKIKEMESRIENLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLY 231
DG KI+ +E +I+ LE ELRE AA+E +LY++V EHG+S KVH PARRLSRLY
Sbjct: 188 TLDG-----KIEHLEKKIKMLEGELREAAAIEAALYTVVAEHGNSTSKVHAPARRLSRLY 352
Query: 232 IHACKHWTPKRKATIAKNAVSGL 254
+HA K +R+A AK++VSGL
Sbjct: 353 LHASKENLQERRAGAAKSSVSGL 421
>TC217235 similar to UP|Q9LW88 (Q9LW88) Arabidopsis thaliana genomic DNA,
chromosome 3, P1 clone: MSL1, partial (36%)
Length = 1253
Score = 38.5 bits (88), Expect = 0.010
Identities = 37/170 (21%), Positives = 65/170 (37%), Gaps = 14/170 (8%)
Frame = +1
Query: 17 EQKEGNEDVYDTDTTKDSLSSQGDSFTNEDVKVEKASKDPKNKVRANSLESNRGSRERSD 76
++ + N+ D++ D + Q +S TNE SKD + A+ + +
Sbjct: 1 DESKSNDTAKDSEKAGDGEAKQPESKTNEAEDKLTESKDAAEESNADKEHTAEKESTDDE 180
Query: 77 RKTNKLQSK---VSGSNQKKSINSNKGPSRVTNKNT-----STNTKPVKVPAKVSSESSE 128
K +K Q+K SG+ KK N+ S++ + T S N + V + S+
Sbjct: 181 SKVDKEQNKDVTESGNEDKKDATHNESASKLDKEKTGDGKDSENDDKNENTNNVDKKDSK 360
Query: 129 GVDEKPVIE---VKEIEILDGSSN---GAQSVGSEDEIHEIVNAEENGEG 172
+P E +K ++L S N G G + + G G
Sbjct: 361 AESAEPSAEGGHLKSFQLLSSSQNAFTGLAGTGFSNSSFSFGSISNEGSG 510
>TC209454 weakly similar to PIR|T01524|T01524 zinc finger protein homolog
T10M13.22 - Arabidopsis thaliana {Arabidopsis thaliana;}
, partial (49%)
Length = 908
Score = 35.0 bits (79), Expect = 0.11
Identities = 22/76 (28%), Positives = 36/76 (46%), Gaps = 5/76 (6%)
Frame = +2
Query: 46 DVKVEKASKDPKNKVRANSLESNRGSRERSDRKTNKLQSKVSGSNQKKSINS-----NKG 100
++ +E S+ ++ NSL ++ SR R+D N L G + KKS S +
Sbjct: 347 EISIEDESEYNRDISEENSLANSLISRNRNDDTMNSLMDNFKGDDDKKSWASFQERIAEA 526
Query: 101 PSRVTNKNTSTNTKPV 116
P +V +TN KP+
Sbjct: 527 PEQVLRYYRNTNAKPI 574
>TC205125 similar to UP|HAT9_ARATH (P46603) Homeobox-leucine zipper protein
HAT9 (Homeodomain-leucine zipper protein HAT9)
(Homeodomain transcription factor HAT9) (HD-ZIP protein
9), partial (38%)
Length = 813
Score = 34.3 bits (77), Expect = 0.20
Identities = 42/179 (23%), Positives = 72/179 (39%), Gaps = 4/179 (2%)
Frame = +3
Query: 28 TDTTKDSLSSQGDSFTNEDVKVEKASKDPKNKVRANSLESNRGSRERSDRKTN-KLQSKV 86
T TT SL S + + D + P K NS E+ R++ K+ +
Sbjct: 156 TTTTTPSLPSISNKLDHVDHHHHLITLRPTTKSPYNSSEAEPSLTLGLSRESYLKVPKNI 335
Query: 87 SGSNQKKSINSNKGPSRVTNKNTSTNTKPVKVPAKVSS---ESSEGVDEKPVIEVKEIEI 143
G N ++S P + + +T TN+ + SS + + + V++ EI+
Sbjct: 336 IGQNSNNKVSSCDDP--LDHLSTQTNSPHHSAVSSFSSGRVKRERDLSCEEVVDATEIDQ 509
Query: 144 LDGSSNGAQSVGSEDEIHEIVNAEENGEGEDGAAMKSKIKEMESRIENLEEELREVAAL 202
D S G IV A + E EDG A + K++ + + LEE ++ + L
Sbjct: 510 RDHSCEG------------IVRATD--EDEDGTAARKKLRLSKEQSALLEESFKQHSTL 644
>TC231230 weakly similar to GB|CAA65563.1|1403551|SCLACHXVI P2570 protein
{Saccharomyces cerevisiae;} , partial (3%)
Length = 842
Score = 32.3 bits (72), Expect = 0.74
Identities = 30/143 (20%), Positives = 59/143 (40%), Gaps = 1/143 (0%)
Frame = +2
Query: 45 EDVKVEKASKDPKNKVRANSLESNRGSRERSDRKTNKLQSK-VSGSNQKKSINSNKGPSR 103
E+ + E+ K+ + + L SN +E + K K ++K + G + ++S++
Sbjct: 305 ENKREEQLIKELEEILSREGLSSNPSEKEIKEVKRKKARAKELEGIDLSNIVSSSR---- 472
Query: 104 VTNKNTSTNTKPVKVPAKVSSESSEGVDEKPVIEVKEIEILDGSSNGAQSVGSEDEIHEI 163
++TS+ T P KV E+S NGA+ ++DE ++
Sbjct: 473 --RRSTSSYTSPPPPKPKVPVETS--------------------GNGAECSDNDDEDNDN 586
Query: 164 VNAEENGEGEDGAAMKSKIKEME 186
EE G+D + + + E
Sbjct: 587 EEDEEEDSGDDDGSQSEEFNDDE 655
>TC216649 weakly similar to UP|Q840B9 (Q840B9) Endo-b1,4-mannanase 26B,
partial (7%)
Length = 470
Score = 32.3 bits (72), Expect = 0.74
Identities = 34/163 (20%), Positives = 68/163 (40%), Gaps = 1/163 (0%)
Frame = -3
Query: 30 TTKDSLSSQGDSFTNEDVKVEKA-SKDPKNKVRANSLESNRGSRERSDRKTNKLQSKVSG 88
T++ + S ED K E + +KD + ++ +N ERS + K +SK
Sbjct: 462 TSQSGKKQKPSSDDEEDDKAELSDAKDVSQEDEDVAVPNNESDDERSKSEEQKEKSKSHK 283
Query: 89 SNQKKSINSNKGPSRVTNKNTSTNTKPVKVPAKVSSESSEGVDEKPVIEVKEIEILDGSS 148
KKS+ N ++ +S PVK + + +K V E D +S
Sbjct: 282 RTSKKSVKENSVSK--ADRTSSAKKTPVKDAKSIEKIKKKTTSKKSVAE------HDSAS 127
Query: 149 NGAQSVGSEDEIHEIVNAEENGEGEDGAAMKSKIKEMESRIEN 191
+S + + V+ +++ +G+ A+ K K ++ +++
Sbjct: 126 ASVKSKQPASKKQKTVSEKQDTKGKT-ASKKQTDKSSKALVKD 1
>TC203315 homologue to UP|Q9M3H6 (Q9M3H6) Histone H2B, complete
Length = 778
Score = 31.6 bits (70), Expect = 1.3
Identities = 25/87 (28%), Positives = 37/87 (41%), Gaps = 1/87 (1%)
Frame = +2
Query: 133 KPVIEVKEIEILDGSSNGAQSVGSEDEIHEIVNAEENGEGEDGAAMKSKIKEMESRIENL 192
KP EV + +GS G + G E+ GEG G + +++E R E
Sbjct: 56 KPFFEVSDFP--NGSGKGREEAGGEEA--------SGGEGTGGEEAEGGEEDLEGRRERE 205
Query: 193 EEELREVAALEV-SLYSIVPEHGSSAH 218
EEE E ++ L+ P+ GS H
Sbjct: 206 EEEAHEEERGDLQDLHLQGPQAGSPRH 286
>TC224938 similar to GB|AAS75312.1|45680886|AY568529 multidomain cyclophilin
type peptidyl-prolyl cis-trans isomerase {Arabidopsis
thaliana;} , partial (17%)
Length = 1474
Score = 31.6 bits (70), Expect = 1.3
Identities = 27/98 (27%), Positives = 44/98 (44%)
Frame = +2
Query: 39 GDSFTNEDVKVEKASKDPKNKVRANSLESNRGSRERSDRKTNKLQSKVSGSNQKKSINSN 98
G S + V+ ++ VR SL S S R+ ++++ +S + K +
Sbjct: 263 GKSVSRSPVRTRSLKSVSRSPVRTRSLRSVSKSPVRARSQSHRSRSSPRAPSGK---TIS 433
Query: 99 KGPSRVTNKNTSTNTKPVKVPAKVSSESSEGVDEKPVI 136
+ P RV K+ S + PV+ PA+ S SS V K I
Sbjct: 434 RSPVRVLRKSISRS--PVRSPARSLSRSSGWVPSKKSI 541
>TC224795 weakly similar to UP|Q9FF10 (Q9FF10) Similarity to heparanase,
partial (50%)
Length = 877
Score = 31.6 bits (70), Expect = 1.3
Identities = 18/43 (41%), Positives = 24/43 (54%), Gaps = 1/43 (2%)
Frame = -1
Query: 587 PGAVLEALNGETIVER-RMSAESIRSFPYSAAPVVYMPPSSVN 628
PGA E LN E + ++S I+SFPY AAP + P +N
Sbjct: 316 PGATREGLNVEFLYNVCKISLSFIKSFPYCAAPTLAPMPFPLN 188
>CO985236
Length = 466
Score = 31.2 bits (69), Expect = 1.7
Identities = 29/159 (18%), Positives = 62/159 (38%), Gaps = 3/159 (1%)
Frame = -1
Query: 19 KEGNEDVYDTDTTKDSLSSQGDSFTNEDVKVEKASKDPKNKVRANSLESNR---GSRERS 75
+EG E+ + D +D + + + V K K+ +E + G ++
Sbjct: 439 EEGVEEATE-DKKEDGVEEVNEDRKEDGVGEVKEDKEVDGVSCVKEVEEDGEVDGVKKVE 263
Query: 76 DRKTNKLQSKVSGSNQKKSINSNKGPSRVTNKNTSTNTKPVKVPAKVSSESSEGVDEKPV 135
D+K ++L K I +K ++ + +K + E+ + EKPV
Sbjct: 262 DKKGDEL----------KEIEEDKKDDHISENDKMDEDTEIKETMEGEPENGKEESEKPV 113
Query: 136 IEVKEIEILDGSSNGAQSVGSEDEIHEIVNAEENGEGED 174
++ E+E G + +++ ++ +E E ED
Sbjct: 112 VDAMEVE---GGIKEKEESKENEKVEVVMEEDEKDEDED 5
>TC227625
Length = 1751
Score = 30.8 bits (68), Expect = 2.2
Identities = 23/99 (23%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Frame = +3
Query: 1 MKVNEVIDNHSTDL--EKEQKEGNEDVYDTDTT----KDSLSSQGDSFTNEDVKVEKASK 54
++ N+ + +S +L EK +K+G ++ K + + + N+ +KV+K+ +
Sbjct: 135 LRKNKKVVGNSDELPKEKSEKDGRNKEKESQNRSTHEKSPIENSHRAEKNKIIKVDKSEQ 314
Query: 55 DPKNKVRANSLESNRGSRERSDR-KTNKLQSKVSGSNQK 92
KNK + ES++G+ R +R K ++++ VS ++
Sbjct: 315 KQKNKEK--HTESDKGAGSRINRTKHGRVENTVSSEKKR 425
>BU765158
Length = 420
Score = 30.4 bits (67), Expect = 2.8
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 121 KVSSESSEGVDEKPVIEVKEIEILDGSSNGAQSVGSEDEIHEIVNAEENGEGEDGAAMKS 180
K + S + PVI + +L+ + G +DE ++ E ED A +K+
Sbjct: 68 KTQQQKSSPTKDSPVISDDKSNLLEDDAEGQSGKDEDDESGSEEDSCSESEVEDPADIKA 247
Query: 181 KIKEMESRIEN---LEEELREVAALEV 204
K E+R EN ++EE RE +V
Sbjct: 248 ARK--EARKENKKKVKEEKREARKTKV 322
>TC206585 similar to UP|Q6NKN2 (Q6NKN2) At3g23540, partial (24%)
Length = 1163
Score = 30.4 bits (67), Expect = 2.8
Identities = 51/198 (25%), Positives = 82/198 (40%), Gaps = 4/198 (2%)
Frame = +3
Query: 4 NEVIDNHSTDLEKEQKEGNEDVYDTDTTKDSLSSQGDSFTNEDVKVEKASK-DPKNKVRA 62
++ I H +DL E G+++V D +S Q F + V + + P N RA
Sbjct: 255 DKFIQPHHSDLISEAYAGDKNVIKFDGDHNSSRPQ---FFYDSVSIFFYNVLHPPNVPRA 425
Query: 63 NSLESNRGSRERSDRKTNKLQSKVSGSNQKKSINSNKGPSRVTNKNTSTNTKPVKVPAKV 122
+ LE + D KL S V S + ++S + S T +S++ P K
Sbjct: 426 HKLE------KYYDLGDLKLGSGVDESLLYEILSSLRSAS--TEAASSSSVLPTISSTKS 581
Query: 123 SSESSEGVDEKPVIEVKEIEILDGSSNGAQSVGSEDEIHEIVNAEENGEGEDGAAMKSKI 182
SE V PV +V+ D N + ++ + + NGEGED + S
Sbjct: 582 VSELLSEV--APVTDVESFFGEDTDGNDGHT--------DVQDKKLNGEGEDCCSYTSSN 731
Query: 183 KEMESRIENL---EEELR 197
+E R +L +E+LR
Sbjct: 732 RESWGRCSSLGGSDEDLR 785
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.311 0.128 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,352,433
Number of Sequences: 63676
Number of extensions: 350450
Number of successful extensions: 1581
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of query: 710
length of database: 12,639,632
effective HSP length: 104
effective length of query: 606
effective length of database: 6,017,328
effective search space: 3646500768
effective search space used: 3646500768
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Medicago: description of AC141114.10