Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141110.2 - phase: 0 
         (262 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC215415 similar to UP|Q6J192 (Q6J192) Fasciclin-like AGP 12, pa...   405  e-114
TC217020 similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, pa...   142  1e-34
TC204373 weakly similar to GB|AAM19981.1|20466119|AY098971 AT5g4...   132  2e-31
TC217373 weakly similar to UP|Q7Y250 (Q7Y250) Arabinogalactan pr...   129  1e-30
TC204370 weakly similar to GB|AAM19981.1|20466119|AY098971 AT5g4...   125  2e-29
TC225286 weakly similar to UP|Q9SP59 (Q9SP59) Arabinogalactan pr...   121  4e-28
TC208218 weakly similar to UP|Q6J189 (Q6J189) Fasciclin-like AGP...   112  1e-25
TC219315 weakly similar to UP|Q6J190 (Q6J190) Fasciclin-like AGP...   100  5e-22
TC227271 similar to GB|AAG24276.1|10880493|AF195889 fasciclin-li...   100  7e-22
TC234339 similar to UP|Q6J196 (Q6J196) Fasciclin-like AGP 8, par...    99  3e-21
TC217021 similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, pa...    89  2e-18
TC217372 weakly similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP...    81  6e-16
TC225828 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara...    75  3e-14
BQ094318 weakly similar to GP|21553523|gb arabinogalactan protei...    75  3e-14
TC216483 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabin...    74  7e-14
TC227272 similar to GB|AAK55685.1|14190409|AF378882 AT3g60900/T4...    70  1e-12
TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabin...    59  2e-09
BE804797                                                               53  1e-07
BG405050                                                               51  6e-07
BI471377                                                               50  8e-07

>TC215415 similar to UP|Q6J192 (Q6J192) Fasciclin-like AGP 12, partial (79%)
          Length = 1205

 Score =  405 bits (1042), Expect = e-114
 Identities = 205/260 (78%), Positives = 234/260 (89%)
 Frame = +2

Query: 1   MKVSMIFLVSTLLLLSSSAFAKTVSPPSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFH 60
           M+ SMIF+VS ++LL SSAFAKT SPPS    SPTPAPAPAP  DFVNLTELL+VAGPFH
Sbjct: 224 MEFSMIFIVSNIMLLFSSAFAKTASPPSL---SPTPAPAPAP--DFVNLTELLSVAGPFH 388

Query: 61  TFLQYLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHA 120
           TFL YL+STKV+DTFQNQANNTEEGITIFVPKDS+F ++KK +LS L  +++KQVILFHA
Sbjct: 389 TFLGYLESTKVIDTFQNQANNTEEGITIFVPKDSAFNAIKKTTLSNLTSNQLKQVILFHA 568

Query: 121 LPHFYSLADFKNLSQTASTPTFAGGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVA 180
           LPHFYSLA+F +LSQT+STPTFAGGDYTLNFTD+SGTV INSGWS TKV+SAVHATDPVA
Sbjct: 569 LPHFYSLAEFTSLSQTSSTPTFAGGDYTLNFTDDSGTVHINSGWSKTKVSSAVHATDPVA 748

Query: 181 IYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSKSSSPSSSPDRSSSYK 240
           IYQVDKVLLPEAI GT+IPP  APAPTP+IAPAADSPTE SADSK+SSPSS+ D SSS+K
Sbjct: 749 IYQVDKVLLPEAILGTNIPPAPAPAPTPDIAPAADSPTEHSADSKASSPSSTHDDSSSHK 928

Query: 241 IVSYGIWGNLVLATFGLVVV 260
           ++SYGIW NLVLATFG++V+
Sbjct: 929 LISYGIWANLVLATFGVLVL 988


>TC217020 similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, partial (66%)
          Length = 815

 Score =  142 bits (359), Expect = 1e-34
 Identities = 87/235 (37%), Positives = 139/235 (59%), Gaps = 11/235 (4%)
 Frame = +3

Query: 37  APAPA-PTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGITIFVPKDSS 95
           APAPA PT    N+T++L  AG F TF++ L+++++ D   +Q NN+ +G+T+F P D++
Sbjct: 120 APAPAGPT----NITQVLEKAGQFTTFIKLLKASQIADRINSQLNNSNQGLTVFAPTDNA 287

Query: 96  FASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTP--TFAG----GDYTL 149
           F+SLK  +L+ +   +  Q+I FH LP  Y+++ F    QTAS P  T AG    G+Y L
Sbjct: 288 FSSLKAGTLNSINSQDQMQLIQFHILPTLYTISQF----QTASNPLHTQAGNSDDGEYPL 455

Query: 150 NFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPE 209
           N T +   V + +G   T V++ +++ + +A+YQVDKVLLP  +FG      +APA +P 
Sbjct: 456 NVTTSGNQVNVTTGVVDTTVSNTIYSDNQLAVYQVDKVLLPMKLFG-----AMAPAASPA 620

Query: 210 IAPAADSPTEQ----SADSKSSSPSSSPDRSSSYKIVSYGIWGNLVLATFGLVVV 260
            APA   P +     +ADS S S  +S D SS+  +  + + G   +A   +++V
Sbjct: 621 EAPAPTKPEKNVRAGAADSPSGSSDTSADASSAVSLKRHTVEGVTFVAAVVVMIV 785


>TC204373 weakly similar to GB|AAM19981.1|20466119|AY098971 AT5g44130/MLN1_5
           {Arabidopsis thaliana;} , partial (60%)
          Length = 1283

 Score =  132 bits (331), Expect = 2e-31
 Identities = 86/252 (34%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
 Frame = +3

Query: 10  STLLLLSSSAFAKTVSPPSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQST 69
           STL+LL+ + F          A++   APAP+P+   VNLT +L   G + T ++ L+ T
Sbjct: 66  STLILLTLTTFLI--------AQAQAQAPAPSPS-GAVNLTAILEKGGQYTTLMKLLKDT 218

Query: 70  KVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLAD 129
           + L   ++Q  +  +G T+F P D++F SLK  +L+KL DD+  ++ILFH  P +Y+++D
Sbjct: 219 QQLTQIESQLKSNSQGFTLFAPTDNAFQSLKPGALNKLSDDQKVKLILFHVTPKYYTISD 398

Query: 130 FKNLSQTAST-PTFAGGDYTLNFTDNSGT-VKINSGWSITKVTSAVHATDPVAIYQVDKV 187
              +S    T  T   G + LNFT   G  V I++G   T++ + +    P+A+YQVDKV
Sbjct: 399 LLTVSNPVRTQATEKEGTWGLNFTGQGGNQVNISTGVVQTQLNNPLREKFPLAVYQVDKV 578

Query: 188 LLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSKSSSPSSSPDRSSSYKIVSYGIW 247
           LLP  +FGT      + AP+P+   +  +P   S     S+PS SP  +++   ++ G  
Sbjct: 579 LLPLELFGTTKTRASSAAPSPK--GSKSTPEIPSVGKAGSAPSDSPKDTNAANGMNVG-- 746

Query: 248 GNLVLATFGLVV 259
                  FGLV+
Sbjct: 747 -------FGLVL 761


>TC217373 weakly similar to UP|Q7Y250 (Q7Y250) Arabinogalactan protein,
           partial (66%)
          Length = 982

 Score =  129 bits (324), Expect = 1e-30
 Identities = 92/261 (35%), Positives = 133/261 (50%), Gaps = 3/261 (1%)
 Frame = +2

Query: 1   MKVSMIFLVSTLLLLSSSAFAKTVSPPSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFH 60
           MK  ++F +S LL++  ++   T          P P+P+ APT    ++  +L  AG F 
Sbjct: 65  MKKHLLFSLSLLLMVLFTSAQTT----------PAPSPSSAPT----DIIRILKKAGGFT 202

Query: 61  TFLQYLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHA 120
           T ++ L +T+V      Q  N+  G+T+F P D++F SLK   L+ L D +  ++I FH 
Sbjct: 203 TLIRLLTTTQVSTQINAQLLNSNNGLTVFAPNDNAFQSLKPGFLNSLNDQQKNELIQFHV 382

Query: 121 LPHFYSLADFKNLSQTASTPTFAGGD---YTLNFTDNSGTVKINSGWSITKVTSAVHATD 177
           LP F S+++F  LS    T   AG D     LN T +   V + +G   T V  +V++  
Sbjct: 383 LPTFVSISNFDTLSNPVRTQ--AGDDPDRLALNITSSGNQVNLTTGVVNTTVGGSVYSDH 556

Query: 178 PVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSKSSSPSSSPDRSS 237
            +AIYQVDKVLLP   F    PP   PAP P  A A+      SA   +  PSS+ D  S
Sbjct: 557 QLAIYQVDKVLLPRDFFVPKPPP---PAPAPAKAKAS------SAKKSTEGPSSAADNDS 709

Query: 238 SYKIVSYGIWGNLVLATFGLV 258
           +  I   GIW +L +AT   V
Sbjct: 710 A-AISLNGIWLSLSVATIAAV 769


>TC204370 weakly similar to GB|AAM19981.1|20466119|AY098971 AT5g44130/MLN1_5
           {Arabidopsis thaliana;} , partial (59%)
          Length = 1002

 Score =  125 bits (314), Expect = 2e-29
 Identities = 83/248 (33%), Positives = 135/248 (53%), Gaps = 6/248 (2%)
 Frame = +3

Query: 11  TLLLLSSSAFAKTVSPPSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTK 70
           TL+LL  + F          A++   APAPAP+   VNLT +L   G + T ++ L+ T+
Sbjct: 39  TLILLILTTFLM--------AQTQAQAPAPAPS-GAVNLTAILEKGGQYTTLIKLLKDTQ 191

Query: 71  VLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADF 130
            L   ++Q  +  +G T+F P D++F SLK  +L+ L DD+  ++ILFH  P +Y+++D 
Sbjct: 192 QLTQIESQLKSNSQGFTLFAPTDNAFQSLKPGALNDLSDDKKVKLILFHVTPKYYTISDL 371

Query: 131 KNLSQTAST-PTFAGGDYTLNFTDNSGT-VKINSGWSITKVTSAVHATDPVAIYQVDKVL 188
             +S    T  T   G + LNFT   G  V I++G   T++ +A+    P+A+YQVDKVL
Sbjct: 372 LTVSNPVRTQATEEEGTWGLNFTGQGGNQVNISTGVVQTQLNNALREKFPLAVYQVDKVL 551

Query: 189 LPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSKSSSPSSSPDR----SSSYKIVSY 244
           LP  +FGT      + AP+P+   +  +P   S      +PS   D+    +++ + V++
Sbjct: 552 LPLELFGTTKTTHSSEAPSPK--GSKSTPEIPSVGKAGGAPSPHGDKKDTNAANGRNVAF 725

Query: 245 GIWGNLVL 252
           G+   L L
Sbjct: 726 GLVVGLAL 749


>TC225286 weakly similar to UP|Q9SP59 (Q9SP59) Arabinogalactan protein
           Pop14A9, partial (64%)
          Length = 1207

 Score =  121 bits (303), Expect = 4e-28
 Identities = 83/239 (34%), Positives = 125/239 (51%), Gaps = 3/239 (1%)
 Frame = +1

Query: 5   MIFLVSTLLLLSSSAFAKTVSPPSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQ 64
           ++F  ST  L  S A A T   P+ P+ +  PAP P+  P   ++  +L  AG F T ++
Sbjct: 169 VLFSHSTTTLAQSPAAAPTA--PATPSTAAAPAPVPSAPP--TDIIRILKKAGGFTTLIR 336

Query: 65  YLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHF 124
            LQ+T+V +   +Q   T  G+T+F P D++F+SLK   L+ L D +  ++I FH LP +
Sbjct: 337 LLQATQVSNQINSQLLTTSGGLTLFAPNDNAFSSLKPGFLNSLNDQQKNELIQFHLLPTY 516

Query: 125 YSLADFKNLSQTASTPTFAGGD-YTLNFTDNSGTVKINSGWSITKVT--SAVHATDPVAI 181
            S+++F  LS    T      D   LN T + G  ++N    +  VT    V+    +A+
Sbjct: 517 VSVSNFDTLSNPVRTQAGENPDRLALNITSSGGN-QVNMTTGVVNVTLGGTVYTDHQLAV 693

Query: 182 YQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADSKSSSPSSSPDRSSSYK 240
           YQVDKVLLP   F    PPV  PAP PE    A    ++SADS +++   +   + S K
Sbjct: 694 YQVDKVLLPRDFFEAK-PPV--PAPAPE---KAKGSKKKSADSTATTADDAESDAISVK 852


>TC208218 weakly similar to UP|Q6J189 (Q6J189) Fasciclin-like AGP 15, partial
           (46%)
          Length = 1043

 Score =  112 bits (281), Expect = 1e-25
 Identities = 85/281 (30%), Positives = 140/281 (49%), Gaps = 19/281 (6%)
 Frame = +2

Query: 1   MKVSMIFLVSTLLLLSSSAFAKTVSPPSPPAESPTP---APAPAP----------TPDFV 47
           MK + +F  S  LLLSS+  A + +P + P   PTP   AP+P P          +PD V
Sbjct: 65  MKQATLFSFSLFLLLSSTTMAISPAPAAAPKTPPTPKATAPSPKPLVPTLPQSPDSPDSV 244

Query: 48  --NLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEG-ITIFVPKDSSFASLKKPSL 104
             ++T +L  A  F   ++ L++T++++   +Q    + G ITI  P DS+F++LK   L
Sbjct: 245 PDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFL 424

Query: 105 SKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAGGD---YTLNFTDNSGTVKIN 161
           + L + +  +++ FH LP F S ++F +LS      T AG D     LN      +V I+
Sbjct: 425 NSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQ--TVAGKDPARLPLNVNALGNSVNIS 598

Query: 162 SGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQS 221
           +G     V   V++ + + IY VDKVLLP   F T+  P  AP+    +A +  +  + S
Sbjct: 599 TGVVNATVLGVVYSDNKLGIYHVDKVLLPLDFFITNKAPASAPS---TLAKSPKAAKDNS 769

Query: 222 ADSKSSSPSSSPDRSSSYKIVSYGIWGNLVLATFGLVVVIL 262
           ++      +   ++S +  +VS G    L+     LV  +L
Sbjct: 770 SEDDQEETNQHQNKSGAVSVVSIG-GATLMSLAIALVATML 889


>TC219315 weakly similar to UP|Q6J190 (Q6J190) Fasciclin-like AGP 14, partial
           (32%)
          Length = 1223

 Score =  100 bits (250), Expect = 5e-22
 Identities = 92/320 (28%), Positives = 145/320 (44%), Gaps = 58/320 (18%)
 Frame = +3

Query: 1   MKVSMIFLVSTLLLLSSSAFAK----------TVSP--PSPPAESPTPA-------PAPA 41
           M+ S  F++ T +LL +  +            T SP  PSPP   P+P        PA A
Sbjct: 72  MQESQSFIIPTTILLLALCYTTSGQLSPIQPPTTSPSLPSPPLSQPSPPSPALHSPPATA 251

Query: 42  PTPDF-------------------------VNLTELLTVAGPFHTFLQYLQSTKVLDTFQ 76
           P P F                         +++ ++L  A  F    + L++T++++   
Sbjct: 252 PAPGFNTVPLVPVTPSGAPTPTTIIPKGPTIDIVQILRKAKRFSVLTRLLKTTQLINQLN 431

Query: 77  NQ-ANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQ 135
           +Q   ++  G+T+F P+DS+F+ LK   L+ L D +  +++ FH L    S+++F  L+ 
Sbjct: 432 SQLVTSSSGGLTLFAPEDSAFSKLKAGFLNSLTDRQKVELLQFHTLSSVISISNFDTLTN 611

Query: 136 TASTPTFAGGD---YTLNFTDNSGT-VKINSGWSITKVTSAVHATDPVAIYQVDKVLLPE 191
              T   AG D     LN T   G+ V + +G     VT  V++ + +AIYQVDKVLLP 
Sbjct: 612 PVQTQ--AGDDPQRLQLNVTTYGGSQVSMATGAVNASVTGTVYSDNKLAIYQVDKVLLPL 785

Query: 192 AIFGTDIPPVLAPAPTPEIA----PAADSPTEQSADSKSSSPSSSPDRSSSYKIVSYGI- 246
            +    + P  APAP P +A    P AD     +AD  +   +   D  +    VS G  
Sbjct: 786 DL----VLPSKAPAPAPALARKGLPKADKGNSTAADDGTVDGNDDSDGKALPAGVSAGCT 953

Query: 247 --WGN--LVLATFGLVVVIL 262
             W N  +V+   GLV  +L
Sbjct: 954 MKWVNNVVVVGVVGLVGGVL 1013


>TC227271 similar to GB|AAG24276.1|10880493|AF195889 fasciclin-like
           arabinogalactan protein FLA8 {Arabidopsis thaliana;} ,
           partial (75%)
          Length = 1213

 Score =  100 bits (249), Expect = 7e-22
 Identities = 66/207 (31%), Positives = 107/207 (50%), Gaps = 1/207 (0%)
 Frame = +2

Query: 28  SPPAESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGIT 87
           S P  SP    AP P+ D VN+T L+  AG   TF   + S  ++ TFQ+ A   ++G+T
Sbjct: 170 SAPIISPGILAAPPPSAD-VNITALIEKAG-CKTFASLISSNGLIKTFQSTA---DKGLT 334

Query: 88  IFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAG-GD 146
           IF P D +F +   P LSKL + E+  ++ +HA   +  +   K    + +T    G G 
Sbjct: 335 IFAPNDEAFKAKGVPDLSKLTNAEVVSLLQYHAAAKYLPVGSLKTTKDSINTLASNGAGK 514

Query: 147 YTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAP 206
           + L  +    ++ +++G   +++   +  + P++IY VD VLLP  +F     P  APAP
Sbjct: 515 FDLTVSVAGDSLTLHTGVDSSRIAETILDSTPLSIYSVDSVLLPPELFAKSPSP--APAP 688

Query: 207 TPEIAPAADSPTEQSADSKSSSPSSSP 233
            P  AP + SP    +++ S  P+S P
Sbjct: 689 GPVTAP-SPSPVSTPSEAPSPLPASPP 766



 Score = 29.6 bits (65), Expect = 1.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 21  AKTVSPPSPPAESPTPAPAPAPTP 44
           A + SP S P+E+P+P PA  P P
Sbjct: 701 APSPSPVSTPSEAPSPLPASPPAP 772



 Score = 29.6 bits (65), Expect = 1.5
 Identities = 13/32 (40%), Positives = 17/32 (52%)
 Frame = +2

Query: 13  LLLSSSAFAKTVSPPSPPAESPTPAPAPAPTP 44
           +LL    FAK+ SP   P     P+P+P  TP
Sbjct: 635 VLLPPELFAKSPSPAPAPGPVTAPSPSPVSTP 730



 Score = 28.9 bits (63), Expect = 2.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 25  SPPSPPAESPTPAPAPAPTPD 45
           SPP+P  E+P  APA AP+ +
Sbjct: 758 SPPAPAGETPAGAPADAPSSE 820



 Score = 28.1 bits (61), Expect = 4.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 15  LSSSAFAKTVSPPSPPAESPTPAPAPAP 42
           LS  +    + PP   A+SP+PAPAP P
Sbjct: 611 LSIYSVDSVLLPPELFAKSPSPAPAPGP 694


>TC234339 similar to UP|Q6J196 (Q6J196) Fasciclin-like AGP 8, partial (22%)
          Length = 895

 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 74/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
 Frame = +3

Query: 33  SPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEG-ITIFVP 91
           +PTP   P P+    ++ ++L  A  F+ FL+ +++T++++   +Q    + G +TI  P
Sbjct: 6   APTP---PQPSGGTTDIVQVLQQANSFNIFLRLMKTTQLINQLNSQLLTIKSGGLTILAP 176

Query: 92  KDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAG---GDYT 148
            D +F+ LK   L+ L D +  +++ FH LP F S ++F  L  T    T AG   G   
Sbjct: 177 DDGAFSELKPGFLNSLSDGKKLELVQFHVLPDFVSASNFDTL--TNPVRTLAGNKPGKVE 350

Query: 149 LNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTP 208
           LN     G+V I++G     +   ++    +A+Y+V KVLLP     T   P LAPAP  
Sbjct: 351 LNVISYGGSVNISTGAVNATMNGVIYTDKHLAVYRVGKVLLPSEFVATTKKP-LAPAPAL 527

Query: 209 EIAPAAD-SPTEQSADSKSSSPSSSPDRSS-------------SYKIVSYGIWGNLVLAT 254
           + AP    +   ++   +   PS  P++SS               +I   G+W +LVL  
Sbjct: 528 KPAPVTSANDVAEAPKPEKEKPSPKPEQSSESSTQVVPTVTSGGVRIGVSGMWVSLVL-- 701

Query: 255 FGLVVV 260
            GLV V
Sbjct: 702 -GLVFV 716


>TC217021 similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, partial (48%)
          Length = 447

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
 Frame = +1

Query: 5   MIFLVSTLLLLSSSAFAKTVSPPSPPAESPTPAPAPA-PTPDFVNLTELLTVAGPFHTFL 63
           M  L + L LL  + F +T+S           APAPA PT    N+T++L  AG F TF+
Sbjct: 31  MAKLFNFLPLLFLNIFIQTISAQV--------APAPAGPT----NITQVLEKAGQFTTFI 174

Query: 64  QYLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPH 123
           + L+++++ D   +Q NN+ +G+T+F P D++F+SLK  +L+ +   +  Q+I FH LP 
Sbjct: 175 KLLKASQIADRINSQLNNSNQGLTVFAPTDNAFSSLKAGTLNSINSQDQMQLIQFHILPT 354

Query: 124 FYSLADFKNLSQTASTP--TFAG----GDYTLNFT 152
            Y+++ F    QTAS P  T AG    G+Y LN T
Sbjct: 355 LYTISQF----QTASNPLHTQAGNSDDGEYPLNVT 447


>TC217372 weakly similar to UP|Q6J193 (Q6J193) Fasciclin-like AGP 11, partial
           (42%)
          Length = 451

 Score = 80.9 bits (198), Expect = 6e-16
 Identities = 49/146 (33%), Positives = 78/146 (52%)
 Frame = +2

Query: 1   MKVSMIFLVSTLLLLSSSAFAKTVSPPSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFH 60
           MK +++F +S LL++  ++               TPAP+P+ TP   ++  +L  AG F 
Sbjct: 59  MKKNLLFSLSLLLMVLFTS------------SQTTPAPSPSSTP--TDIIRILKKAGGFT 196

Query: 61  TFLQYLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHA 120
           T ++ L +T+V      Q  N+  G+T+F P D++F SLK   L+ L D +  ++I FH 
Sbjct: 197 TLIRLLTTTQVSTQINAQLLNSNNGLTVFAPNDNAFQSLKPGFLNSLNDQQKNELIQFHV 376

Query: 121 LPHFYSLADFKNLSQTASTPTFAGGD 146
           LP F S+++F  LS    T   AG D
Sbjct: 377 LPTFVSISNFDTLSNPVRTQ--AGDD 448


>TC225828 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
           arabinogalactan-protein 2, partial (41%)
          Length = 1108

 Score = 75.1 bits (183), Expect = 3e-14
 Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 9/241 (3%)
 Frame = +3

Query: 31  AESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGITIFV 90
           A S   A AP   P  ++L  +++  G    F   L+ +K L  F+    N + G+T+F 
Sbjct: 51  AISSADAEAPTAAPSAIDLISIMSKQG-CKAFADLLRGSKALPAFKE---NVDGGLTVFC 218

Query: 91  PKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAGGD-YTL 149
           P DS+ +    P    L + +   ++L+HA P + SL   K+ +   +T    G + Y  
Sbjct: 219 PTDSAISGFA-PKYKNLTEAQKVSLLLYHATPVYESLQMLKSSNGIMNTLATEGANKYDF 395

Query: 150 NFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPE 209
                   V + +  +   +   +   DP   Y++++VL+P  +F        APA +P+
Sbjct: 396 TVKSEGEDVSLKTKVNTASIVGTLIDQDPFVAYKINRVLMPRELFKASDALDQAPAESPK 575

Query: 210 IAPAADSPTEQSADSKSS-SPSSSP-DRSSSYKIV---SYGIWG---NLVLATFGLVVVI 261
            A    +  + S DS ++ +P+  P D S   K     S G+ G    LV+  FGL++  
Sbjct: 576 PAKKKKNAKKGSEDSDAADAPADGPSDDSEDQKAADQDSNGVSGLHVRLVMVLFGLIMGF 755

Query: 262 L 262
           L
Sbjct: 756 L 758


>BQ094318 weakly similar to GP|21553523|gb arabinogalactan protein-like
           {Arabidopsis thaliana}, partial (45%)
          Length = 421

 Score = 75.1 bits (183), Expect = 3e-14
 Identities = 51/134 (38%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
 Frame = +1

Query: 85  GITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAG 144
           G+T+F P+DS+F+ LK   L+ L D +  +++ FH L  F S+++F  L+    T   AG
Sbjct: 34  GLTLFAPEDSAFSKLKAGFLNSLSDRQKVELLQFHTLSSFISISNFDTLTNPVQTQ--AG 207

Query: 145 GD---YTLNFTDNSGT-VKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPP 200
            D     LN T   G+ V + +G     VT  V+  + +AIYQVDKVLLP  +    + P
Sbjct: 208 DDPKRLQLNVTTFGGSQVSMATGAVNASVTGTVYTDNKLAIYQVDKVLLPLDL----VLP 375

Query: 201 VLAPAPTPEIAPAA 214
             APAP P  A  A
Sbjct: 376 SEAPAPAPGKAKGA 417


>TC216483 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
           protein 1 precursor, partial (31%)
          Length = 1084

 Score = 73.9 bits (180), Expect = 7e-14
 Identities = 69/223 (30%), Positives = 109/223 (47%), Gaps = 15/223 (6%)
 Frame = +2

Query: 27  PSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTK-VLDTFQNQANNTEEG 85
           PS  AE    APAPAPT    NLT +++  G    F   L +    L+TF +   N + G
Sbjct: 104 PSAAAE----APAPAPTQQ--NLTNIMSKHG-CKVFADTLSAQPDALNTFND---NLDGG 253

Query: 86  ITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKN---LSQTASTPTF 142
           +T+F P D +F +   P    L       ++ FHA+P + S A  K+   L  T +T   
Sbjct: 254 LTVFCPLDDAFKAFL-PKFKNLTKSGKAALLEFHAVPVYQSKATLKSNNGLQNTLATDGA 430

Query: 143 AGGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVL 202
              D+T+   ++   V + +  +  K+T  +    P+AI+ ++KVL P+ +F  +     
Sbjct: 431 NKFDFTVQ--NDGEDVTLKTKLTTAKITDTLIDEHPLAIFAINKVLXPKELFKGEAE--- 595

Query: 203 APAPTPEIAPAADSPT--------EQSADS---KSSSPSSSPD 234
           APAP PE   AAD+P         +++AD+    S +P+ SPD
Sbjct: 596 APAPAPE-PSAADAPAPAKKGKKKKKAADAPADDSDAPADSPD 721


>TC227272 similar to GB|AAK55685.1|14190409|AF378882 AT3g60900/T4C21_310
           {Arabidopsis thaliana;} , partial (30%)
          Length = 678

 Score = 69.7 bits (169), Expect = 1e-12
 Identities = 43/160 (26%), Positives = 79/160 (48%), Gaps = 16/160 (10%)
 Frame = +1

Query: 95  SFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAG-GDYTLNFTD 153
           +F +   P LSKL + E+  ++ +HA   +  +   K    + +T    G G + L  + 
Sbjct: 1   AFKAKGVPDLSKLTNAEVVSLLQYHAAAKYLPVGSLKTTKDSINTLASNGAGKFDLTVSV 180

Query: 154 NSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAP----APTPE 209
              ++ +++G   +++   +  + P++IY VD VLLP+ +F     P  AP    +PTP 
Sbjct: 181 AGDSLTLHTGVDSSRIADTILDSSPLSIYSVDSVLLPQELFAKSPSPAPAPESVSSPTPA 360

Query: 210 IAPAADSPT-----------EQSADSKSSSPSSSPDRSSS 238
            +P A++P+           E  A + + +PSS  +RSSS
Sbjct: 361 PSPVAEAPSPFPASPPAPAGESPAGAPAEAPSSEAERSSS 480



 Score = 31.6 bits (70), Expect = 0.38
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 13/45 (28%)
 Frame = +1

Query: 13  LLLSSSAFAKTVSP-------------PSPPAESPTPAPAPAPTP 44
           +LL    FAK+ SP             PSP AE+P+P PA  P P
Sbjct: 280 VLLPQELFAKSPSPAPAPESVSSPTPAPSPVAEAPSPFPASPPAP 414



 Score = 30.0 bits (66), Expect = 1.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 25  SPPSPPAESPTPAPAPAPTPD 45
           SPP+P  ESP  APA AP+ +
Sbjct: 400 SPPAPAGESPAGAPAEAPSSE 462


>TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
           protein 1 precursor, partial (58%)
          Length = 1213

 Score = 58.9 bits (141), Expect = 2e-09
 Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 5/187 (2%)
 Frame = +3

Query: 27  PSPPAESPTPAPAPAPTPDFVNLTELLTVAGPFHTFLQYLQSTK-VLDTFQNQANNTEEG 85
           PS  AE    APAPAPT    NLT +++  G    F   L +    L+TF +   N + G
Sbjct: 555 PSAAAE----APAPAPTQQ--NLTNIMSKHG-CKVFADALSAQPDALNTFND---NLDGG 704

Query: 86  ITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLADFKN---LSQTASTPTF 142
           +T+F P D +F +   P    L       ++ FH +P + S A  K+   L  T +T   
Sbjct: 705 LTVFCPLDDAFKAFL-PKFKNLTKSGKVALLEFHGVPVYQSKATLKSNNGLQNTLATDGA 881

Query: 143 AGGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEAIF-GTDIPPV 201
              D+T+   ++   V + +  +  K+T  +    P+AI+ + KVL P+ +F G +  P 
Sbjct: 882 NKFDFTVQ--NDGEDVTLKTKLTTAKITDTLIDEQPLAIFAISKVLQPKELFKGGESXPX 1055

Query: 202 LAPAPTP 208
           L     P
Sbjct: 1056LXRXLLP 1076



 Score = 28.1 bits (61), Expect = 4.2
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +1

Query: 204 PAPTPEIAPAADSPTEQSADSKSSSPS-SSPDRSSS 238
           P+PT   +PA+   T  S  S ++SPS +SP +S++
Sbjct: 97  PSPTRTTSPASSQSTPSSPPSTTTSPSPTSPPKSTA 204


>BE804797 
          Length = 370

 Score = 53.1 bits (126), Expect = 1e-07
 Identities = 34/118 (28%), Positives = 62/118 (51%), Gaps = 6/118 (5%)
 Frame = +2

Query: 70  KVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSLSKLKDDEIKQVILFHALPHFYSLAD 129
           ++ D  + Q N +++G+T F   D +F+SLK  +L+ +   +  Q+I  H LP  Y+++ 
Sbjct: 29  QISDRIRYQLNISDQGLTGFALTDHAFSSLKARTLNYINSQDQMQLIQIHILPTLYTISQ 208

Query: 130 FKNLSQTASTP--TFAG----GDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAI 181
                 TAS P  T AG    G+Y LN       V + +G   T V++++++ +P  +
Sbjct: 209 L----LTASNPLHTQAGNSDDGEYPLNVNTLWNQVNVTTGVVDTTVSNSIYSDNPTCV 370


>BG405050 
          Length = 418

 Score = 50.8 bits (120), Expect = 6e-07
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 22/120 (18%)
 Frame = +2

Query: 1   MKVSMIFLVSTLLLLSSSAF-----------AKTVSPPSPPAESPTPAP----------A 39
           MK + +F  S  LLLSS+             A   +PP+P A +P+P P          +
Sbjct: 65  MKQATLFFFSLFLLLSSTTMAISPAPAAAPKATAKTPPTPKATAPSPKPLVPTIPQSPDS 244

Query: 40  PAPTPDFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEE-GITIFVPKDSSFAS 98
           P   PD  ++T +L  A  F   ++ L++T++++   +Q    +  GITI  P DS+F++
Sbjct: 245 PDSVPD--DITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSN 418


>BI471377 
          Length = 421

 Score = 50.4 bits (119), Expect = 8e-07
 Identities = 38/120 (31%), Positives = 57/120 (46%), Gaps = 6/120 (5%)
 Frame = +2

Query: 133 LSQTASTPTFAGGDYTLNFTDNSGTVKINSGWSITKVTSAVHATDPVAIYQVDKVLLPEA 192
           L+  + +PT     Y LN T    +V I++G     +T  V+    +AIY VDKVL+P  
Sbjct: 14  LTLASDSPT----GYQLNVTAYGNSVNISTGVVNATLTGIVYTDKTLAIYHVDKVLIP-- 175

Query: 193 IFGTDIPPVLAPAPTPEIAPAADSPT------EQSADSKSSSPSSSPDRSSSYKIVSYGI 246
                 P  +APAP    AP AD         +Q+  +K SS + S   +    +VS+G+
Sbjct: 176 -LDFSKPKPIAPAPAVAKAPKADKENASAEDDDQAQAAKDSSGAMSLVSTQGTTLVSFGV 352


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.313    0.130    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,095,574
Number of Sequences: 63676
Number of extensions: 248773
Number of successful extensions: 11355
Number of sequences better than 10.0: 660
Number of HSP's better than 10.0 without gapping: 4747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9386
length of query: 262
length of database: 12,639,632
effective HSP length: 95
effective length of query: 167
effective length of database: 6,590,412
effective search space: 1100598804
effective search space used: 1100598804
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)


Medicago: description of AC141110.2