TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141110.1 + phase: 0 /pseudo
         (143 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BI699882                                                               51  2e-07
TC234828                                                               29  0.87
TC221357 similar to UP|Q9SZM7 (Q9SZM7) Protein kinase like prote...    27  3.3
BI469235                                                               27  4.3
TC226357 similar to UP|Q9LL47 (Q9LL47) SAG101, partial (13%)           26  7.4
AW278239                                                               26  7.4
TC215017 homologue to UP|Q9ZNZ5 (Q9ZNZ5) Peroxidase precursor  (...    25  9.7

>BI699882 
          Length = 399

 Score = 50.8 bits (120), Expect = 2e-07
 Identities = 23/45 (51%), Positives = 32/45 (71%)
 Frame = -1

Query: 96  FDMIEHLKTLYEEQARHERFDVSKALFSTKLSEGGPVGPHVLKMI 140
           ++++EHL  +Y  Q+R  RF +SKALF + L+    VGPHVLKMI
Sbjct: 345 YEIVEHLTKMYGGQSRTTRFQLSKALFRSSLAANEKVGPHVLKMI 211


>TC234828 
          Length = 857

 Score = 28.9 bits (63), Expect = 0.87
 Identities = 18/71 (25%), Positives = 30/71 (41%), Gaps = 9/71 (12%)
 Frame = +3

Query: 25  IDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAH---------AKHLNDSVEVS 75
           +DW     I L  ++K+ V  G +  + P    AA              + ++ +  EVS
Sbjct: 447 MDWLSTNHIFLDCKEKMLVFGGDVVPSEPLKEDAANEETEDVRTYMVLFSMYVEEDAEVS 626

Query: 76  CIMLASMTPEL 86
           CI + S  PE+
Sbjct: 627 CIPVVSEFPEV 659


>TC221357 similar to UP|Q9SZM7 (Q9SZM7) Protein kinase like protein, partial
           (15%)
          Length = 555

 Score = 26.9 bits (58), Expect = 3.3
 Identities = 16/62 (25%), Positives = 28/62 (44%)
 Frame = +3

Query: 12  SLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKHLNDS 71
           S +EK   TE    DW  + +++   EK      G +      G   A++   ++ LND+
Sbjct: 171 SAVEKALATEGKSGDWEIDRKLLKLGEKIASGSSGDLYRGVYLGEDVAVKVLRSEQLNDA 350

Query: 72  VE 73
           +E
Sbjct: 351 LE 356


>BI469235 
          Length = 400

 Score = 26.6 bits (57), Expect = 4.3
 Identities = 15/55 (27%), Positives = 27/55 (48%), Gaps = 4/55 (7%)
 Frame = +2

Query: 61  RNAHAKHLNDSVEVSCIMLASMTPELQKQHEG----MTAFDMIEHLKTLYEEQAR 111
           R   + +L D+++ S  ML+ +       H+     M AFD +  L+  +EE+ R
Sbjct: 101 RALDSNNLRDALKYSAQMLSELRTSKLSPHKFYELYMRAFDQLRKLEMFFEEETR 265


>TC226357 similar to UP|Q9LL47 (Q9LL47) SAG101, partial (13%)
          Length = 2084

 Score = 25.8 bits (55), Expect = 7.4
 Identities = 16/61 (26%), Positives = 30/61 (48%), Gaps = 2/61 (3%)
 Frame = +2

Query: 68  LNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQ--ARHERFDVSKALFSTK 125
           L  S+ +       +TP++Q+QH  +    ++  L+ L +E    +  +FD SK L   K
Sbjct: 905 LRASIRLQLWAALGLTPDMQQQHLNIDINALVTKLEKLEKEVIFQKGNKFDPSKKLNVMK 1084

Query: 126 L 126
           +
Sbjct: 1085I 1087


>AW278239 
          Length = 417

 Score = 25.8 bits (55), Expect = 7.4
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 13  LIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIP 49
           ++  + L   N+  WS  M +  + + K+  +DG +P
Sbjct: 282 ILTSQPLDHKNYTTWSLAMMVAFSVKNKVAFIDGSLP 392


>TC215017 homologue to UP|Q9ZNZ5 (Q9ZNZ5) Peroxidase precursor  (Fragment) ,
           partial (65%)
          Length = 1023

 Score = 25.4 bits (54), Expect = 9.7
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 10  LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIP 49
           ++SL+ KE L  ++ + WSRN+ I   H+    V D PIP
Sbjct: 246 IKSLVGKECL*RSDVVKWSRNV-ISGFHQ----VRDDPIP 142


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.316    0.130    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,436,183
Number of Sequences: 63676
Number of extensions: 61374
Number of successful extensions: 356
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of query: 143
length of database: 12,639,632
effective HSP length: 88
effective length of query: 55
effective length of database: 7,036,144
effective search space: 386987920
effective search space used: 386987920
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)