BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141107.7 - phase: 0
(705 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC231132 weakly similar to UP|Q93YF5 (Q93YF5) SET-domain-contain... 271 6e-73
TC212381 similar to UP|Q93YF5 (Q93YF5) SET-domain-containing pro... 145 1e-63
BE661766 similar to GP|15485584|emb SET-domain-containing protei... 238 9e-63
TC230728 similar to UP|Q93YF5 (Q93YF5) SET-domain-containing pro... 230 2e-60
CO979383 194 3e-50
TC231674 similar to UP|SUV6_ARATH (Q8VZ17) Histone-lysine N-meth... 168 1e-42
TC231520 weakly similar to UP|Q8L821 (Q8L821) SET domain-contain... 134 2e-31
TC221711 weakly similar to UP|Q84XG3 (Q84XG3) SET domain protein... 129 4e-30
BM891849 129 4e-30
TC211593 similar to UP|SUV1_ARATH (Q9FF80) Histone-lysine N-meth... 115 7e-26
BF424945 similar to GP|13517747|gb| SUVH3 {Arabidopsis thaliana}... 114 2e-25
TC218322 similar to UP|SUV9_ARATH (Q9T0G7) Probable histone-lysi... 112 6e-25
BF010305 weakly similar to GP|13517745|gb| SUVH2 {Arabidopsis th... 92 6e-19
TC229925 similar to UP|Q946J2 (Q946J2) Suppressor of variegation... 74 3e-16
TC222698 similar to UP|SUV8_ARATH (Q9C5P0) Histone-lysine N-meth... 76 6e-14
TC229811 similar to UP|Q9FIH7 (Q9FIH7) Similarity to SET-domain ... 69 9e-12
TC232298 similar to GB|AAO64916.1|29029074|BT005981 At5g53430 {A... 65 8e-11
AW306371 similar to GP|13517751|gb| SUVH5 {Arabidopsis thaliana}... 62 9e-10
TC217528 similar to GB|AAO64916.1|29029074|BT005981 At5g53430 {A... 62 1e-09
TC229209 similar to UP|Q9C5X4 (Q9C5X4) Trithorax-like protein 1,... 60 4e-09
>TC231132 weakly similar to UP|Q93YF5 (Q93YF5) SET-domain-containing protein,
partial (24%)
Length = 1134
Score = 271 bits (694), Expect = 6e-73
Identities = 133/233 (57%), Positives = 160/233 (68%), Gaps = 16/233 (6%)
Frame = +2
Query: 488 CQPGNRNCPCIQKNGGYLPYTAAGLVADLKSVIHECGPSCQCPPTCRNRISQAGLKFRLE 547
C PG+ NC CI++N G PYT G++ K ++HECGP+CQC P C+NR+SQ GLK +E
Sbjct: 5 CVPGDLNCSCIRRNEGDFPYTGNGILVSRKPLVHECGPTCQCFPNCKNRVSQTGLKHPME 184
Query: 548 VFRTSNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLGAENEDEYIFDSTRIYQQ--- 604
VFRT ++GWGLRS D IRAGTFICEYAGEV+D + L E DEY+FD+TRIY Q
Sbjct: 185 VFRTKDRGWGLRSLDPIRAGTFICEYAGEVVDRGKVSQLVKEG-DEYVFDTTRIYDQFKW 361
Query: 605 ------LEVFPAN--IEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPIVRENKNEP 656
LE +N E +P PL ITAKN GNVARFMNHSCSPNV W+P+V E N+
Sbjct: 362 NYEPRLLEEIGSNDSTEDYAMPYPLIITAKNIGNVARFMNHSCSPNVFWQPVVYEENNQS 541
Query: 657 DLHIAFFAIRHIPPMMELTYDYGINLP-----LQAGQRKKNCLCGSVKCRGYF 704
LH+AFFA+RHIPPM ELTYDYG+ A + +K CLCGS KCRG F
Sbjct: 542 YLHVAFFALRHIPPMTELTYDYGLAQSDHAEGSSAAKGRKKCLCGSSKCRGSF 700
>TC212381 similar to UP|Q93YF5 (Q93YF5) SET-domain-containing protein,
partial (16%)
Length = 435
Score = 145 bits (367), Expect(2) = 1e-63
Identities = 67/79 (84%), Positives = 71/79 (89%)
Frame = +3
Query: 409 QPEAYTIWKSIQQWTDKAAPRTGVILPDLTSGAEKVPVCLVNDVDNEKGPAYFTYIPTLK 468
QP+AY IWKSIQQWT+K+A R GVILPDLTSGAE VPVCLVNDVDNEKGPAYFTYIPTLK
Sbjct: 12 QPQAYMIWKSIQQWTEKSASRAGVILPDLTSGAENVPVCLVNDVDNEKGPAYFTYIPTLK 191
Query: 469 NLRGVAPVESSFGCSCIGG 487
NLR APVESS GC C+GG
Sbjct: 192 NLRPTAPVESSTGCPCVGG 248
Score = 116 bits (291), Expect(2) = 1e-63
Identities = 51/63 (80%), Positives = 57/63 (89%)
Frame = +1
Query: 487 GCQPGNRNCPCIQKNGGYLPYTAAGLVADLKSVIHECGPSCQCPPTCRNRISQAGLKFRL 546
GCQ N NCPCIQKNGGYLPY++A L+ADLKSVI+ECGPSCQCP CRNR+SQ+GLKFRL
Sbjct: 247 GCQSKNFNCPCIQKNGGYLPYSSALLLADLKSVIYECGPSCQCPSNCRNRVSQSGLKFRL 426
Query: 547 EVF 549
EVF
Sbjct: 427 EVF 435
>BE661766 similar to GP|15485584|emb SET-domain-containing protein {Nicotiana
tabacum}, partial (4%)
Length = 875
Score = 238 bits (606), Expect = 9e-63
Identities = 134/227 (59%), Positives = 161/227 (70%), Gaps = 9/227 (3%)
Frame = +3
Query: 6 GQESVPA----DKSRVLNVKPLRTLVPVFPSPSNPSSSSNPQGGAPFVAVSPAGPFPAGV 61
GQ + PA DK+RVLNVKPLRTLVPVFPSPSNP+SSS PQGGAPFV VSP+GPFP+GV
Sbjct: 6 GQGTTPASESFDKTRVLNVKPLRTLVPVFPSPSNPASSSTPQGGAPFVCVSPSGPFPSGV 185
Query: 62 APFYPFFVSPESQRLSEQHAPNPTPQR--ATPISAAVPINSFKTPTAATNGDVGSSRRKS 119
APFYPFF+S ESQRLSEQ+A P+ QR A P+S AVPINSF+TPT A NGDVGSS++ +
Sbjct: 186 APFYPFFISSESQRLSEQNAQTPSGQRVPAAPVSTAVPINSFRTPTGAANGDVGSSQKNT 365
Query: 120 RTRRGQLTEEEGYDNTEVIDVDAE--TGGGSSKRKKRAKGR-RASGAATDGSGVAAVDVD 176
R+ RG +TEE+GY N E+ ++DA+ TG G SKRK K + R SG + G DVD
Sbjct: 366 RS-RGWVTEEDGYSNVEIEEIDADEGTGTGRSKRKSNKKTKARQSGGSVSG------DVD 524
Query: 177 LDAVAHDILQSINPMVFDVINHPDGSRDSVTYTLMIYEVLRRKLGQI 223
DAVA DIL+S+N +VFDV+ S Y + R GQI
Sbjct: 525 PDAVAADILKSLNALVFDVLKSTRR*XGSSAYHS*YMK*CXRSFGQI 665
Score = 34.7 bits (78), Expect = 0.15
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +2
Query: 209 TLMIYEVLRRKLGQIEESTKDLHT--GAKRPDLKAGNVM-MTKGVRSN-SKKRIGIVPGV 264
+LMIYEV+ +KL +++ DLK + M KG+R++ + + + G+
Sbjct: 620 SLMIYEVMPKKLWTNWKNSNRAXNFWNQNGLDLKGRCQL*MNKGIRTHRXETXLELXLGL 799
Query: 265 EIGDIFFFRFEMCLVGLHSPSMAGI 289
+ G+I F +FE GLH+P G+
Sbjct: 800 KXGEISFSKFEWA*XGLHAPLWLGM 874
>TC230728 similar to UP|Q93YF5 (Q93YF5) SET-domain-containing protein,
partial (11%)
Length = 774
Score = 230 bits (586), Expect = 2e-60
Identities = 105/126 (83%), Positives = 114/126 (90%)
Frame = +2
Query: 580 NARAEMLGAENEDEYIFDSTRIYQQLEVFPANIEAPKIPSPLYITAKNEGNVARFMNHSC 639
+AR E LG +NED+YI DSTRIYQQLEVFP + EAPKIPSPLYI+AKNEGNVARFMNH C
Sbjct: 8 SARMEELGGDNEDDYICDSTRIYQQLEVFPGDTEAPKIPSPLYISAKNEGNVARFMNHCC 187
Query: 640 SPNVLWRPIVRENKNEPDLHIAFFAIRHIPPMMELTYDYGINLPLQAGQRKKNCLCGSVK 699
SPNVLWRP++RENKNE DLHIAF+AIRHIPPMMELTYDYG LPL+ GQRKK CLCGSVK
Sbjct: 188 SPNVLWRPVIRENKNESDLHIAFYAIRHIPPMMELTYDYGAVLPLKVGQRKKKCLCGSVK 367
Query: 700 CRGYFC 705
CRGYFC
Sbjct: 368 CRGYFC 385
>CO979383
Length = 834
Score = 194 bits (493), Expect(2) = 3e-50
Identities = 102/255 (40%), Positives = 149/255 (58%), Gaps = 16/255 (6%)
Frame = -3
Query: 440 GAEKVPVCLVNDVDNEKGPAYFTYIPTL--KNLRGVAPVESSFGCSCIGGCQPGNRNCPC 497
G E++P+C VN +D+E P F YI ++ N V P E GC C GC + C C
Sbjct: 832 GKERIPICAVNTIDDENPPP-FNYITSMIYPNCH-VLPAE---GCDCTNGCSDLEK-CSC 671
Query: 498 IQKNGGYLPYTAAGLVADLKSVIHECGPSCQCPPTCRNRISQAGLKFRLEVFRTSNKGWG 557
+ KNGG +P+ + K +++ECGP+C+CP TC NR+SQ G+KF+LE+F+T +GWG
Sbjct: 670 VVKNGGEIPFNHNEAIVQAKPLVYECGPTCKCPSTCHNRVSQLGIKFQLEIFKTDTRGWG 491
Query: 558 LRSWDAIRAGTFICEYAGEVIDNARAEMLGAENEDEYIFD--------------STRIYQ 603
+RS ++I +G+FICEY GE++++ AE DEY+FD ST
Sbjct: 490 VRSLNSIPSGSFICEYIGELLEDKEAEQ--RTGNDEYLFDIGNNYSNSTLWDDLSTLTTL 317
Query: 604 QLEVFPANIEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPIVRENKNEPDLHIAFF 663
+ A+ E K I A GN+ RF+NHSCSPN++ + ++ ++ + HI FF
Sbjct: 316 MPDAHTASCEVVK-DGGFTIDAAQFGNLGRFINHSCSPNLIAQNVLYDHHDTRMPHIMFF 140
Query: 664 AIRHIPPMMELTYDY 678
A +IPP+ ELTYDY
Sbjct: 139 AADNIPPLQELTYDY 95
Score = 23.5 bits (49), Expect(2) = 3e-50
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 689 RKKNCLCGSVKCRG 702
+ K C CGSV C G
Sbjct: 51 KXKXCYCGSVDCTG 10
>TC231674 similar to UP|SUV6_ARATH (Q8VZ17) Histone-lysine
N-methyltransferase, H3 lysine-9 specific 6 (Histone
H3-K9 methyltransferase 6) (H3-K9-HMTase 6) (Suppressor
of variegation 3-9 homolog 6) (Su(var)3-9 homolog 6) ,
partial (24%)
Length = 755
Score = 168 bits (425), Expect(2) = 1e-42
Identities = 85/207 (41%), Positives = 122/207 (58%), Gaps = 15/207 (7%)
Frame = +1
Query: 511 GLVADLKSVIHECGPSCQCPPTCRNRISQAGLKFRLEVFRTSNKGWGLRSWDAIRAGTFI 570
G + K +++ECGP+C+CP TC NR+SQ G+KF+LE+F+T +GWG+RS ++I +G+FI
Sbjct: 61 GAIVQAKPLVYECGPTCKCPSTCHNRVSQLGIKFQLEIFKTDTRGWGVRSLNSIPSGSFI 240
Query: 571 CEYAGEVIDNARAEMLGAENEDEYIFDSTRIYQQL-----------EVFPANIEAPKIPS 619
CEY GE++++ AE DEY+FD Y +V + E K
Sbjct: 241 CEYIGELLEDKEAEQ--RTGNDEYLFDIGNNYSNSALWDDLSTLMPDVHTTSCEVVK-DG 411
Query: 620 PLYITAKNEGNVARFMNHSCSPNVLWRPIVRENKNEPDLHIAFFAIRHIPPMMELTYDYG 679
I A GNV RF+NHSCSPN++ + ++ +N + HI FFA +IPP+ ELTYDY
Sbjct: 412 GFTIDAAQFGNVGRFINHSCSPNLIAQNVLYDNHDTRMPHIMFFAADNIPPLQELTYDYN 591
Query: 680 INL----PLQAGQRKKNCLCGSVKCRG 702
+ +KK C CGSV+C G
Sbjct: 592 YEIDQIRDSGGNIKKKYCHCGSVECTG 672
Score = 24.3 bits (51), Expect(2) = 1e-42
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 495 CPCIQKNGGYLPY 507
C C+ KNGG +P+
Sbjct: 12 CSCVVKNGGEIPF 50
>TC231520 weakly similar to UP|Q8L821 (Q8L821) SET domain-containing protein
SET118, partial (24%)
Length = 565
Score = 134 bits (336), Expect = 2e-31
Identities = 71/170 (41%), Positives = 97/170 (56%), Gaps = 3/170 (1%)
Frame = +1
Query: 431 GVILPDLTSGAEKVPVCLVNDVDNEK-GPAYFTYIPTLKNLRGVAPVESSFGCSCIGGCQ 489
G++ D+T G E +P+ N VD+ P FTY +K + V ++ GC C G C
Sbjct: 58 GLVCEDITGGQEDMPIPATNLVDDPPVPPTGFTYCKFVKVAKNVKLPMNATGCECKGICN 237
Query: 490 PGNRNCPCIQKNGGYLPYTA--AGLVADLKSVIHECGPSCQCPPTCRNRISQAGLKFRLE 547
C C +NG PY + G + + K V+ ECGP C C P C NR SQ GL++RLE
Sbjct: 238 DPT-TCACALRNGSDFPYVSRDGGRLVEAKDVVFECGPECGCGPGCVNRTSQRGLRYRLE 414
Query: 548 VFRTSNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLGAENEDEYIFD 597
VFRT+ KGW +RSWD I +G +CEY G + ARAE + + E+ YIF+
Sbjct: 415 VFRTAKKGWAVRSWDFIPSGAPVCEYTGIL---ARAEDMDSVLENNYIFE 555
>TC221711 weakly similar to UP|Q84XG3 (Q84XG3) SET domain protein SDG117,
partial (12%)
Length = 1208
Score = 129 bits (324), Expect = 4e-30
Identities = 76/187 (40%), Positives = 107/187 (56%), Gaps = 4/187 (2%)
Frame = +1
Query: 520 IHECGPSCQCPPTCRNRISQAGLKFRLEVFRTSNKGWGLRSWDAIRAGTFICEYAGEVID 579
++EC C+C +C NR+ Q G++ +LEVF+T KGW +R+ +AI GTF+CEY GEV+D
Sbjct: 1 VYECNHMCRCNKSCPNRVLQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLD 180
Query: 580 ----NARAEMLGAENEDEYIFDSTRIYQQLEVFPANIEAPKIPSPLYITAKNEGNVARFM 635
R + GAE+ Y++D I ++ IE + I A GNV+RF+
Sbjct: 181 VQEARDRRKRYGAEH-CSYLYD---IDARVNDMGRLIEE---QAQYVIDATKFGNVSRFI 339
Query: 636 NHSCSPNVLWRPIVRENKNEPDLHIAFFAIRHIPPMMELTYDYGINLPLQAGQRKKNCLC 695
NHSCSPN++ ++ E+ + HI F+A R I ELTYDY L G CLC
Sbjct: 340 NHSCSPNLVNHQVLVESMDCERAHIGFYASRDIALGEELTYDYQYELMPGEG---SPCLC 510
Query: 696 GSVKCRG 702
S+KCRG
Sbjct: 511 ESLKCRG 531
>BM891849
Length = 421
Score = 129 bits (324), Expect = 4e-30
Identities = 58/99 (58%), Positives = 74/99 (74%)
Frame = +3
Query: 497 CIQKNGGYLPYTAAGLVADLKSVIHECGPSCQCPPTCRNRISQAGLKFRLEVFRTSNKGW 556
CIQ+N G PYTA G++ K ++HECGP C+C P C+NR+SQ GLK ++EVF+T ++GW
Sbjct: 126 CIQRNEGDFPYTANGVLVSRKPLVHECGPLCKCFPNCKNRVSQTGLKHQMEVFKTKDRGW 305
Query: 557 GLRSWDAIRAGTFICEYAGEVIDNARAEMLGAENEDEYI 595
GLRS D IRAGTFICEYAGEVID A+ +DEY+
Sbjct: 306 GLRSLDPIRAGTFICEYAGEVIDIAKVNK-NRGYDDEYV 419
Score = 46.6 bits (109), Expect = 4e-05
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +1
Query: 395 GFNVFKYKLARVRGQPEAYTIWKSIQQW--TDKAAPRTGVIL 434
G VFKYK R+ GQ A+ +WKS+Q+W + + RTG+IL
Sbjct: 1 GGGVFKYKFVRLPGQSSAFAVWKSVQKWKMSSSTSSRTGIIL 126
>TC211593 similar to UP|SUV1_ARATH (Q9FF80) Histone-lysine
N-methyltransferase, H3 lysine-9 specific 1 (Histone
H3-K9 methyltransferase 1) (H3-K9-HMTase 1) (Suppressor
of variegation 3-9 homolog 1) (Su(var)3-9 homolog 1) ,
partial (5%)
Length = 791
Score = 115 bits (288), Expect = 7e-26
Identities = 95/288 (32%), Positives = 129/288 (43%), Gaps = 7/288 (2%)
Frame = +2
Query: 1 MDHNLGQESVPA----DKSRVLNVKPLRTLVPVFPSPSNPSSSSNPQGGAPFVAVSPAGP 56
M+ Q SVP DK+R++ KPLR+L PV P S S G
Sbjct: 95 MEEGSCQNSVPGSGFVDKTRIVEAKPLRSLAPVLPKSLQSSLS---------------GR 229
Query: 57 FPAGVAPFYPFFVSPESQRLSEQHAPNPTPQRATPISAAVPINSFKTPTAATNGDVGSSR 116
+P+ PF F ESQ P+P P A PI S++ P G++
Sbjct: 230 YPSVFPPFVLFEEPQESQ-------PSPAPMPA-------PIRSYRDPLDEEEAPHGANG 367
Query: 117 RKSRTRRGQLTEEEGYDNTEVIDVDA-ETGGGSSKRKKRAKGRRASGAATDGSGVAAVDV 175
S G DN++ V + S KR K+ K +
Sbjct: 368 ETSSPMEG--LNGNSVDNSQKRAVPPMHSCKYSQKRSKKTKESQ---------------- 493
Query: 176 DLDAVAHDILQSINPMVFDVINHPDGSRDSVTYTLMIYEVLRRKLGQIEESTKDLHT--G 233
D+ S+ + V DG R+ V LM Y+ LRR+L Q+E++ K+L+T
Sbjct: 494 ------FDLSPSVGGI--SVATREDGDRELVNLVLMTYDSLRRRLCQLEDA-KELNTTMA 646
Query: 234 AKRPDLKAGNVMMTKGVRSNSKKRIGIVPGVEIGDIFFFRFEMCLVGL 281
KR DL+A N M K R+N+++R+G VPGVEIGDIFF R EMCLVGL
Sbjct: 647 IKRADLRASNAMTVKAFRTNTRRRVGAVPGVEIGDIFFLRMEMCLVGL 790
>BF424945 similar to GP|13517747|gb| SUVH3 {Arabidopsis thaliana}, partial
(4%)
Length = 266
Score = 114 bits (284), Expect = 2e-25
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = +2
Query: 547 EVFRTSNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLGAENEDEYIFDSTRIYQQLE 606
EVFRT NKGWGLRSWD+IRAGTFICEYAGEVI +AR E LG +N+++ IFDST IY+QLE
Sbjct: 2 EVFRTKNKGWGLRSWDSIRAGTFICEYAGEVIYSARVEELGGDNDNDCIFDSTHIYRQLE 181
Query: 607 VFPANIEAPKIPSPLYITAKNEGNVARFM 635
VF + + SP +I + GNV+RFM
Sbjct: 182 VFSYDTDRHICHSP-FIYQRK*GNVSRFM 265
>TC218322 similar to UP|SUV9_ARATH (Q9T0G7) Probable histone-lysine
N-methyltransferase, H3 lysine-9 specific 9 (Histone
H3-K9 methyltransferase 9) (H3-K9-HMTase 9) (Suppressor
of variegation 3-9 homolog 9) (Su(var)3-9 homolog 9) ,
partial (26%)
Length = 810
Score = 112 bits (280), Expect = 6e-25
Identities = 66/159 (41%), Positives = 91/159 (56%), Gaps = 9/159 (5%)
Frame = +1
Query: 531 PTCRNRISQAGLKFRLEVFRTSNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLGAEN 590
P CRNR++Q GLK RLEVFR+ GWG+RS D I+AG FICEY G V+ +A +L N
Sbjct: 1 PHCRNRVTQKGLKNRLEVFRSRETGWGVRSMDLIQAGAFICEYTGVVLTREQARLL-TMN 177
Query: 591 EDEYIF-----DSTRIYQQLEVFPANIEAPKIPS--PL--YITAKNEGNVARFMNHSCSP 641
D I+ D + L + +N P PS PL + NVA +M+HS +P
Sbjct: 178 GDSLIYPNRFTDRWAEWGDLSMIDSNFVRPSYPSIPPLDFAMDVSRMRNVACYMSHSSTP 357
Query: 642 NVLWRPIVRENKNEPDLHIAFFAIRHIPPMMELTYDYGI 680
NVL + ++ ++ N + FA+ IPPM EL+ DYG+
Sbjct: 358 NVLVQFVLYDHNNLMFPRLMLFAMESIPPMRELSLDYGV 474
>BF010305 weakly similar to GP|13517745|gb| SUVH2 {Arabidopsis thaliana},
partial (12%)
Length = 418
Score = 92.4 bits (228), Expect = 6e-19
Identities = 43/87 (49%), Positives = 52/87 (59%)
Frame = +3
Query: 476 VESSFGCSCIGGCQPGNRNCPCIQKNGGYLPYTAAGLVADLKSVIHECGPSCQCPPTCRN 535
V + GC C+ GC G C C KNGG PYT G + K +I ECGP C CPP CRN
Sbjct: 165 VGKATGCDCVDGCGDG---CFCAMKNGGEFPYTLQGHLVRGKPLIFECGPFCSCPPHCRN 335
Query: 536 RISQAGLKFRLEVFRTSNKGWGLRSWD 562
R++ GLK+ LEVFR+ G+RS D
Sbjct: 336 RVAHNGLKYMLEVFRSKQTSRGVRSLD 416
>TC229925 similar to UP|Q946J2 (Q946J2) Suppressor of variegation related 1,
partial (22%)
Length = 935
Score = 74.3 bits (181), Expect(2) = 3e-16
Identities = 52/155 (33%), Positives = 70/155 (44%), Gaps = 7/155 (4%)
Frame = +1
Query: 554 KGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLGAENEDEYIFDSTRIYQQLEVFPANIE 613
KGWGLR+ + + G F+CE+ GE++ E +Y + Y L
Sbjct: 145 KGWGLRTLEDLPKGAFVCEFVGEILTLKELH----ERNLKYPKNGKYTYPILLDADWGSG 312
Query: 614 APKIPSPLYITAKNEGNVARFMNHSC-SPNVLWRPIVRENKNEPDLHIAFFAIRHIPPMM 672
K L + A + GN ARF+NH C N++ P+ E H AFF R I
Sbjct: 313 IVKDREALCLYAASYGNAARFINHRCLDANLIEIPVEVEGPTHHYYHFAFFTSRKIAAQE 492
Query: 673 ELTYDYGINL------PLQAGQRKKNCLCGSVKCR 701
ELT+DYGIN P++ Q C CGS CR
Sbjct: 493 ELTWDYGINFDDHDDHPVELFQ----CRCGSKFCR 585
Score = 29.6 bits (65), Expect(2) = 3e-16
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 492 NRNCPCIQKNGGYLPYTAAGLVADLKSVIHECGPSCQCPPTCRNRISQAGLKFRLEV 548
++N C++ G+L + I EC C C C NR+ Q G+ +L++
Sbjct: 2 SKNDDCLEPCKGHLK----------RKFIKECWSKCGCGKHCGNRVVQRGITCKLQM 142
>TC222698 similar to UP|SUV8_ARATH (Q9C5P0) Histone-lysine
N-methyltransferase, H3 lysine-9 specific 8 (Histone
H3-K9 methyltransferase 8) (H3-K9-HMTase 8) (Suppressor
of variegation 3-9 homolog 8) (Su(var)3-9 homolog 8) ,
partial (7%)
Length = 523
Score = 75.9 bits (185), Expect = 6e-14
Identities = 36/66 (54%), Positives = 43/66 (64%), Gaps = 3/66 (4%)
Frame = +3
Query: 642 NVLWRPIVRENKNEPDLHIAFFAIRHIPPMMELTYDYGINLPL---QAGQRKKNCLCGSV 698
NV W+P+ N+ LHIAFFA+RHIPPM ELTYDYG + A + +K C CGS
Sbjct: 3 NVFWQPVXYAENNQSFLHIAFFALRHIPPMTELTYDYGCSGHADGSSAPKGRKKCSCGSS 182
Query: 699 KCRGYF 704
KCRG F
Sbjct: 183 KCRGSF 200
>TC229811 similar to UP|Q9FIH7 (Q9FIH7) Similarity to SET-domain
transcriptional regulator, partial (11%)
Length = 1108
Score = 68.6 bits (166), Expect = 9e-12
Identities = 49/160 (30%), Positives = 77/160 (47%)
Frame = +1
Query: 543 KFRLEVFRTSNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLGAENEDEYIFDSTRIY 602
K L R+ WGL + + I A F+ EY GE+I +++ R Y
Sbjct: 88 KKHLRFQRSKIHDWGLLALEPIEAEDFVIEYIGELIRPRISDI------------RERQY 231
Query: 603 QQLEVFPANIEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPIVRENKNEPDLHIAF 662
+++ + + + ++ + A G +ARF+NHSC PN + I E + + I
Sbjct: 232 EKMGIGSSYLF--RLDDGYVVDATKRGGIARFVNHSCEPNCYTKVISVEGQKK----IFI 393
Query: 663 FAIRHIPPMMELTYDYGINLPLQAGQRKKNCLCGSVKCRG 702
+A RHI E+TY+Y PL+ ++K C CGS KCRG
Sbjct: 394 YAKRHIAAGEEITYNY--KFPLE--EKKIPCNCGSRKCRG 501
>TC232298 similar to GB|AAO64916.1|29029074|BT005981 At5g53430 {Arabidopsis
thaliana;} , partial (16%)
Length = 768
Score = 65.5 bits (158), Expect = 8e-11
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Frame = +1
Query: 543 KFRLEVFRTSNKGWGLRSWDAIRAGTFICEYAG----EVIDNARAEMLGAENEDEYIFDS 598
KFR+ ++ GWGL + I+ G + EY G + + R E +E +D Y+F
Sbjct: 289 KFRVCFGKSGIHGWGLFARRDIQEGEMVVEYRGVHVRRSVADLREEKYRSEGKDCYLF-- 462
Query: 599 TRIYQQLEVFPANIEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPIVRENKNEPDL 658
KI + + A N GN+AR +NHSC PN R + + +
Sbjct: 463 -----------------KISEEVVVDATNRGNIARLINHSCMPNCYARIM---SLGDQGS 582
Query: 659 HIAFFAIRHIPPMMELTYDYGINLPLQAGQRKKNCLCGSVKCRGY 703
I A ++ ELTYDY + P + + K CLC + CR +
Sbjct: 583 RIVLIAKTNVSAGEELTYDYLFD-PDERDELKVPCLCKAPNCRRF 714
>AW306371 similar to GP|13517751|gb| SUVH5 {Arabidopsis thaliana}, partial
(7%)
Length = 430
Score = 62.0 bits (149), Expect = 9e-10
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = +2
Query: 341 KLERGNLALEKSMHRGNDVRVIRGLKDVMHPSGKVYVYDGIYKIQDSWVEKAKSGFNVFK 400
+L+RGNLAL+ S N VRVIRG + M K YVYDG+Y ++ W ++ G V++
Sbjct: 5 ELKRGNLALKNSSEEKNPVRVIRG-SESMDDKYKTYVYDGLYVVESYWQDRGSHGKLVYR 181
Query: 401 YKLARVRGQ 409
++L R+ GQ
Sbjct: 182 FRLKRIPGQ 208
>TC217528 similar to GB|AAO64916.1|29029074|BT005981 At5g53430 {Arabidopsis
thaliana;} , partial (24%)
Length = 1473
Score = 61.6 bits (148), Expect = 1e-09
Identities = 44/152 (28%), Positives = 70/152 (45%), Gaps = 4/152 (2%)
Frame = +1
Query: 556 WGLRSWDAIRAGTFICEYAGEVIDNARAEMLGA----ENEDEYIFDSTRIYQQLEVFPAN 611
WGL + I+ G + EY GE + + A++ A E +D Y+F
Sbjct: 748 WGLFARRNIQEGDMVLEYRGEQVRRSIADLREARYRLEGKDCYLF--------------- 882
Query: 612 IEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPIVRENKNEPDLHIAFFAIRHIPPM 671
KI + + A ++GN+AR +NHSC PN R + + + + I A ++
Sbjct: 883 ----KISEEVVVDATDKGNIARLINHSCMPNCYARIM---SVGDEESRIVLIAKTNVAAG 1041
Query: 672 MELTYDYGINLPLQAGQRKKNCLCGSVKCRGY 703
ELTYDY + P + + K CLC + CR +
Sbjct: 1042DELTYDYLFD-PDEPEENKVPCLCKAPNCRKF 1134
>TC229209 similar to UP|Q9C5X4 (Q9C5X4) Trithorax-like protein 1, partial
(28%)
Length = 1537
Score = 59.7 bits (143), Expect = 4e-09
Identities = 47/158 (29%), Positives = 73/158 (45%)
Frame = +2
Query: 545 RLEVFRTSNKGWGLRSWDAIRAGTFICEYAGEVIDNARAEMLGAENEDEYIFDSTRIYQQ 604
RL ++ G+G+ + + G + EY GE++ R + A+ + +I++S
Sbjct: 659 RLAFGKSRIHGFGIFAKHPYKGGDMVIEYTGELV---RPPI--ADRREHFIYNS------ 805
Query: 605 LEVFPANIEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPIVRENKNEPDLHIAFFA 664
+ A +I I A G++A +NHSC+PN R ++ N +E HI FA
Sbjct: 806 --LVGAGTYMFRIDDERVIDATRAGSIAHLINHSCAPNCYSR-VISVNGDE---HIIIFA 967
Query: 665 IRHIPPMMELTYDYGINLPLQAGQRKKNCLCGSVKCRG 702
R I ELTYDY + + C CG KCRG
Sbjct: 968 KRDIKQWEELTYDY----RFFSIDERLACYCGFPKCRG 1069
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.317 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,394,161
Number of Sequences: 63676
Number of extensions: 493217
Number of successful extensions: 3561
Number of sequences better than 10.0: 152
Number of HSP's better than 10.0 without gapping: 3413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3517
length of query: 705
length of database: 12,639,632
effective HSP length: 104
effective length of query: 601
effective length of database: 6,017,328
effective search space: 3616414128
effective search space used: 3616414128
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Medicago: description of AC141107.7