BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140915.5 - phase: 0
(598 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC229610 weakly similar to UP|O22512 (O22512) Grr1, partial (52%) 79 4e-15
TC226686 homologue to UP|O22512 (O22512) Grr1, complete 65 1e-10
TC209931 UP|PTCA_HUMAN (Q14761) Protein tyrosine phosphatase rec... 60 3e-09
TC215542 59 5e-09
TC216301 similar to UP|O22512 (O22512) Grr1, partial (38%) 59 6e-09
TC215544 56 5e-08
TC209901 weakly similar to UP|Q6RZU4 (Q6RZU4) F-box-like protein... 54 2e-07
BU763861 54 3e-07
TC211100 similar to GB|AAM91352.1|22137014|AY133522 At5g23340/MK... 52 1e-06
TC215543 similar to UP|Q8LDN3 (Q8LDN3) F-box protein AtFBL5, par... 49 5e-06
TC214510 49 8e-06
TC219443 48 1e-05
TC219384 46 5e-05
TC225842 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor respo... 45 1e-04
TC218546 similar to GB|AAM91352.1|22137014|AY133522 At5g23340/MK... 44 2e-04
TC214486 44 2e-04
AI855596 similar to GP|30013671|gb Avr9/Cf-9 rapidly elicited pr... 44 2e-04
TC225844 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor respo... 44 2e-04
TC214559 43 5e-04
BQ133915 similar to GP|30013671|gb Avr9/Cf-9 rapidly elicited pr... 43 5e-04
>TC229610 weakly similar to UP|O22512 (O22512) Grr1, partial (52%)
Length = 1428
Score = 79.3 bits (194), Expect = 4e-15
Identities = 105/430 (24%), Positives = 181/430 (41%), Gaps = 13/430 (3%)
Frame = +2
Query: 136 GLRAFSQNITTLTSLICSNLISLNSTDIHLIADTFPLLEELDLAYPSKIINHTHATFSTG 195
GL A + +L SL N+ ++ + IA +LE+LDL + S I N G
Sbjct: 182 GLSAVAHGCPSLRSLSLWNVSTIGDEGVSQIAKRCHILEKLDLCHCSSISNK-------G 340
Query: 196 LEALSLALIKLRKVNLSYHGYLNGTLLSHLFKNCKFLQEVILLRCEQLTIAGVDLALLQK 255
L A++ L + + + L + + C LQ + L C + GV L
Sbjct: 341 LIAIAEGCPNLTTLTIESCPNIGNEGLQAIARLCTKLQSISLKDCPLVGDHGVSSLLASA 520
Query: 256 PTLTSLSI-TCTVTTGLEHLTSHFIDSL--LSLKGLTSLLLTGFRISDQFLSSIAMESLP 312
L+ + + T +T + H+ ++ L L GL ++ GF ++ A
Sbjct: 521 SNLSRVKLQTLKITDFSLAVICHYGKAITNLVLSGLKNVTERGF-----WVMGAAQGLQK 685
Query: 313 LRRLVLSYCPGYTYSGISFLLSKSKRIQHLDLQYTDFLNDHCVAELSLFLGDLLSLNLGN 372
L L ++ C G T + I + ++ L L F++D + + L SL L
Sbjct: 686 LVSLTVTSCRGITDTSIEAIGKGCINLKQLCLHRCCFVSDSGLVAFAKAAVSLESLQLEE 865
Query: 373 CRLLTVSTFFALITNCPSLTEINMNRTNIQGTTIPNSLMDRLVNP--QFKSLFLASAACL 430
C T S + N + + +++ G + +++P +SL +
Sbjct: 866 CNRFTQSGIIVALANIKTKLK-SLSLVKCMGVK-DIDMEVCMLSPCESLRSLVIQKCPGF 1039
Query: 431 EDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRK-IRHLNLT-CLSLK----SL 484
++ M L P LQ L+L+ Y IT+ G+ PLLE+C + ++NLT C +L S
Sbjct: 1040GSASLAMIGKLCPRLQHLNLTGLYGITDAGLLPLLENCEAGLVNVNLTGCWNLTDKVVSA 1219
Query: 485 GTNFDLPDLEVLNLTNT-EVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVN-NCT 542
LEVLNL ++ D +L I+N L L + +C I+D G+ + +
Sbjct: 1220LARLHGGTLEVLNLDGCWKITDASLVAIANNFLVLNDLDVSKC-AISDAGIALLSRASLP 1396
Query: 543 QLREINLDGC 552
L+ ++L GC
Sbjct: 1397SLQVLSLSGC 1426
Score = 47.8 bits (112), Expect = 1e-05
Identities = 32/131 (24%), Positives = 58/131 (43%)
Frame = +2
Query: 443 PNLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTNTE 502
P+L+ L L I +EG+ + + C + L+L S
Sbjct: 209 PSLRSLSLWNVSTIGDEGVSQIAKRCHILEKLDLCHCS---------------------S 325
Query: 503 VDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVAS 562
+ ++ L I+ CP L L + C I ++G+ + CT+L+ I+L CP V V+S
Sbjct: 326 ISNKGLIAIAEGCPNLTTLTIESCPNIGNEGLQAIARLCTKLQSISLKDCPLVGDHGVSS 505
Query: 563 MVVSRPSLRKI 573
++ S +L ++
Sbjct: 506 LLASASNLSRV 538
Score = 35.0 bits (79), Expect = 0.095
Identities = 18/73 (24%), Positives = 36/73 (48%)
Frame = +2
Query: 503 VDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVAS 562
V + L +++ CP+L L L I D+GV + C L +++L C ++ K + +
Sbjct: 170 VTNLGLSAVAHGCPSLRSLSLWNVSTIGDEGVSQIAKRCHILEKLDLCHCSSISNKGLIA 349
Query: 563 MVVSRPSLRKIHV 575
+ P+L + +
Sbjct: 350 IAEGCPNLTTLTI 388
>TC226686 homologue to UP|O22512 (O22512) Grr1, complete
Length = 2818
Score = 64.7 bits (156), Expect = 1e-10
Identities = 90/382 (23%), Positives = 159/382 (41%), Gaps = 10/382 (2%)
Frame = +1
Query: 195 GLEALSLALIKLRKVNLSYHGYLNGTLLSHLFKNCKFLQEVILLRCEQLTIAGVDLALLQ 254
GL ++ +L K++L ++ L + KNC L E+ + C + G+ A+ +
Sbjct: 748 GLIEIASGCHQLEKLDLCKCPNISDKTLIAVAKNCPNLAELSIESCPNIGNEGLQ-AIGK 924
Query: 255 KPTLTSLSITCTVTTGLEHLTSHFIDSLLSLKGLTSLLLTGFRISDQFLSSIAMESLPLR 314
P L S+SI G + + + +L T + L +SD L+ I + +
Sbjct: 925 CPNLRSISIKNCSGVGDQGVAGLLSSASFAL---TKVKLESLNVSDLSLAVIGHYGIAVT 1095
Query: 315 RLVLSYCPGYTYSGISFLLSKSKRIQHLDLQYTDFLNDHCVAELSLFLGDLLSLNLGNCR 374
LVLS P + G + N H + +L+ S+ + CR
Sbjct: 1096 DLVLSCLPNVSEKGFWVMG-----------------NGHGLQKLT-------SITIDCCR 1203
Query: 375 LLTVSTFFALITNCPSLTEINMNRTNIQGTTIPNSLMDRLVNPQFKSLFLASAACLEDQN 434
+T A+ CP N+Q FK L A L D+
Sbjct: 1204 GVTDVGLEAIGRGCP----------NVQN---------------FK---LRKCAFLSDKG 1299
Query: 435 IIMFAALFPNLQQLHLSCSYNITEEGIRPLLESC-RKIRHLNL-TCLSLKSLGTNFDLPD 492
++ FA P+++ L L + IT+ G+ + +C K++ L L +C +K L N +LP
Sbjct: 1300 LVSFARAAPSVESLQLQECHRITQIGLFGVFFNCGAKLKVLTLISCYGIKDL--NMELPA 1473
Query: 493 LE----VLNLTNTEVD---DEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQ-L 544
+ + +LT + + L ++ CP + + L +TD G + ++ + L
Sbjct: 1474 ISPSESIWSLTIRDCPGFGNANLALLGKLCPRIQHVELSGLQGVTDAGFLPLLESSEAGL 1653
Query: 545 REINLDGCPNVQAKVVASMVVS 566
++NL+GC N+ +VV SMV S
Sbjct: 1654 VKVNLNGCVNLTDRVVLSMVNS 1719
Score = 48.9 bits (115), Expect = 6e-06
Identities = 62/289 (21%), Positives = 122/289 (41%), Gaps = 16/289 (5%)
Frame = +1
Query: 283 LSLKGLTSLLLTGFRISDQFLSSIAMESLP---LRRLVLSYCP---GYTYSGISFLLSKS 336
+S +G S L G + +D L++IA+ + L +L + C G T G+ +
Sbjct: 517 ISDEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLTIRGCNSDRGVTNVGLKAIAHGC 696
Query: 337 KRIQHLDLQYTDFLNDHCVAELSLFLGDLLSLNLGNCRLLTVSTFFALITNCPSLTEINM 396
++ L + D + E++ L L+L C ++ T A+ NCP+L E+++
Sbjct: 697 PSLKVCSLWDVATVGDVGLIEIASGCHQLEKLDLCKCPNISDKTLIAVAKNCPNLAELSI 876
Query: 397 NRTNIQGTTIPNSLMDRLVN-PQFKSLFLASAACLEDQNI--IMFAALFPNLQQLHLSCS 453
I N + + P +S+ + + + + DQ + ++ +A F L ++ L S
Sbjct: 877 ESC----PNIGNEGLQAIGKCPNLRSISIKNCSGVGDQGVAGLLSSASFA-LTKVKLE-S 1038
Query: 454 YNITEEGIRPLLESCRKIRHLNLTCLSLKS------LGTNFDLPDLEVLNLTNTE-VDDE 506
N+++ + + + L L+CL S +G L L + + V D
Sbjct: 1039LNVSDLSLAVIGHYGIAVTDLVLSCLPNVSEKGFWVMGNGHGLQKLTSITIDCCRGVTDV 1218
Query: 507 ALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNV 555
L I CP + L +C +++DKG++ + + L C +
Sbjct: 1219GLEAIGRGCPNVQNFKLRKCAFLSDKGLVSFARAAPSVESLQLQECHRI 1365
Score = 47.8 bits (112), Expect = 1e-05
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 491 PDLEVLNLTNTE-VDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINL 549
P L+V +L + V D L I++ C L +L L +C I+DK ++ V NC L E+++
Sbjct: 697 PSLKVCSLWDVATVGDVGLIEIASGCHQLEKLDLCKCPNISDKTLIAVAKNCPNLAELSI 876
Query: 550 DGCPNVQAKVVASMVVSRPSLRKIHV 575
+ CPN+ + + + + P+LR I +
Sbjct: 877 ESCPNIGNEGLQA-IGKCPNLRSISI 951
Score = 40.8 bits (94), Expect = 0.002
Identities = 19/73 (26%), Positives = 40/73 (54%)
Frame = +1
Query: 503 VDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVAS 562
V + L I++ CP+L L + D G++ + + C QL +++L CPN+ K + +
Sbjct: 658 VTNVGLKAIAHGCPSLKVCSLWDVATVGDVGLIEIASGCHQLEKLDLCKCPNISDKTLIA 837
Query: 563 MVVSRPSLRKIHV 575
+ + P+L ++ +
Sbjct: 838 VAKNCPNLAELSI 876
>TC209931 UP|PTCA_HUMAN (Q14761) Protein tyrosine phosphatase receptor type
C-associated protein (PTPRC-associated protein)
(CD45-associated protein) (CD45-AP) (Lymphocyte
phosphatase-associated phosphoprotein), partial (5%)
Length = 883
Score = 60.1 bits (144), Expect = 3e-09
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Frame = +3
Query: 430 LEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSL---KSLGT 486
+ DQ + A +P L+ L+L+ +T++G++ LL C ++ LNL LS ++
Sbjct: 147 ISDQGAQLVADNYPELESLNLTRCIKLTDDGLKSLLHKCLFLQSLNLYALSSFTDEAYRK 326
Query: 487 NFDLPDLEVLNLTNTE-VDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLR 545
L L+ L+L + + DEAL IS +C L L L C +TD+GV+ + CT L
Sbjct: 327 ICLLARLKFLDLCGAQNLSDEALSCIS-KCKNLESLNLTWCVRVTDEGVISIAKGCTSLE 503
Query: 546 EINLDGCPNVQAKVVASM 563
++L G V K + +
Sbjct: 504 FLSLFGIVGVTDKCLEEL 557
Score = 47.0 bits (110), Expect = 2e-05
Identities = 50/203 (24%), Positives = 92/203 (44%), Gaps = 24/203 (11%)
Frame = +3
Query: 195 GLEALSLALIKLRKVNLSYHGYLNGTLLSHLFKNCKFLQEVILLRCEQLTIAGVDLALLQ 254
G+EA++ +L+ ++ ++ + L H+ KNCK + ++ + C+ ++ G L
Sbjct: 3 GIEAITSCCPQLKSFSIYWNVRVTDRGLQHIVKNCKHIIDLNISGCKNISDQGAQLVADN 182
Query: 255 KPTLTSLSIT-CTVTT--GLEHLTSH--FIDSLLSLKGLTSLLLTGFR------------ 297
P L SL++T C T GL+ L F+ S L+L L+S +R
Sbjct: 183 YPELESLNLTRCIKLTDDGLKSLLHKCLFLQS-LNLYALSSFTDEAYRKICLLARLKFLD 359
Query: 298 ------ISDQFLSSIAMESLPLRRLVLSYCPGYTYSGISFLLSKSKRIQHLDLQYTDFLN 351
+SD+ LS I+ + L L L++C T G+ + ++ L L +
Sbjct: 360 LCGAQNLSDEALSCIS-KCKNLESLNLTWCVRVTDEGVISIAKGCTSLEFLSLFGIVGVT 536
Query: 352 DHCVAELSLFLGD-LLSLNLGNC 373
D C+ ELS + + +L++ C
Sbjct: 537 DKCLEELSKSCSNKITTLDVNGC 605
Score = 46.2 bits (108), Expect = 4e-05
Identities = 23/87 (26%), Positives = 43/87 (48%)
Frame = +3
Query: 511 ISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVSRPSL 570
I++ CP L + +TD+G+ H+V NC + ++N+ GC N+ + + + P L
Sbjct: 15 ITSCCPQLKSFSIYWNVRVTDRGLQHIVKNCKHIIDLNISGCKNISDQGAQLVADNYPEL 194
Query: 571 RKIHVPPNFPLSDRNRKLFSRHGCLLV 597
+++ L+D K H CL +
Sbjct: 195 ESLNLTRCIKLTDDGLKSL-LHKCLFL 272
Score = 40.8 bits (94), Expect = 0.002
Identities = 22/107 (20%), Positives = 49/107 (45%)
Frame = +3
Query: 443 PNLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTNTE 502
P L+ + + +T+ G++ ++++C+ I LN++
Sbjct: 30 PQLKSFSIYWNVRVTDRGLQHIVKNCKHIIDLNISGCK---------------------N 146
Query: 503 VDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINL 549
+ D+ ++++ P L L L RC +TD G+ +++ C L+ +NL
Sbjct: 147 ISDQGAQLVADNYPELESLNLTRCIKLTDDGLKSLLHKCLFLQSLNL 287
>TC215542
Length = 1695
Score = 59.3 bits (142), Expect = 5e-09
Identities = 65/227 (28%), Positives = 91/227 (39%), Gaps = 11/227 (4%)
Frame = +3
Query: 358 LSLFLGDLLSLNLGNCRLLTVSTFFALITNCPSLTEINMNRTNIQGTTIPN-----SLMD 412
LSL + + G CR + +F L S NMN N+ + +P +L+
Sbjct: 264 LSLVDDQTVIIASGVCRGWRDAIYFGLARLSLSWCSKNMN--NLVLSLVPKFAKLQTLIL 437
Query: 413 RLVNPQFKSLFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIR 472
R PQ LED + A LQ L LS S+ +T+ + L CR +
Sbjct: 438 RQDKPQ-----------LEDNAVETIAKCCHELQILDLSKSFKLTDRSLYELALGCRDLT 584
Query: 473 HLNLTCLSLKSLGTNFDLPD----LEVLNLTNT--EVDDEALYIISNRCPALLQLVLLRC 526
LN++ S S L L+VLNL D AL I C L L L C
Sbjct: 585 KLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIGQYCNQLQSLNLGWC 764
Query: 527 DYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVSRPSLRKI 573
D + D GV + C LR ++L GC + V ++ P LR +
Sbjct: 765 DNVGDVGVTTLAYGCPDLRIVDLCGCVRITDDSVIALATRCPHLRSL 905
Score = 47.4 bits (111), Expect = 2e-05
Identities = 42/162 (25%), Positives = 79/162 (47%), Gaps = 8/162 (4%)
Frame = +3
Query: 418 QFKSLFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLT 477
+ + L L+ + L D+++ A +L +L++S ++ + L CRK++ LNL
Sbjct: 498 ELQILDLSKSFKLTDRSLYELALGCRDLTKLNISGCSAFSDNALAYLASFCRKLKVLNLC 677
Query: 478 -CL------SLKSLGTNFDLPDLEVLNLTNTE-VDDEALYIISNRCPALLQLVLLRCDYI 529
C+ +L+++G + L+ LNL + V D + ++ CP L + L C I
Sbjct: 678 GCVRAASDTALQAIGQYCN--QLQSLNLGWCDNVGDVGVTTLAYGCPDLRIVDLCGCVRI 851
Query: 530 TDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVSRPSLR 571
TD V+ + C LR + L C N+ + + S+ S+ + R
Sbjct: 852 TDDSVIALATRCPHLRSLGLYYCKNITDRAMYSLAHSKVNNR 977
>TC216301 similar to UP|O22512 (O22512) Grr1, partial (38%)
Length = 1688
Score = 58.9 bits (141), Expect = 6e-09
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Frame = +3
Query: 417 PQFKSLFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESC-RKIRHLN 475
P K L A L D +I FA +L+ L L + IT+ G +L +C K++ ++
Sbjct: 126 PNLKIAHLHKCAFLSDNGLISFAKAASSLESLRLEECHRITQLGFFGVLFNCGAKLKAIS 305
Query: 476 L-TCLSLKSLGTNFDLP------DLEVLNLTNTE-VDDEALYIISNRCPALLQLVLLRCD 527
L +C +K L N LP L L+++N + +L ++ CP L + L +
Sbjct: 306 LVSCYGIKDL--NLVLPTVSPCESLRSLSISNCPGFGNASLSVLGKLCPQLQHVELSGLE 479
Query: 528 YITDKGVMHVVNNCTQ-LREINLDGCPNVQAKVVASM 563
+TD G++ ++ + L ++NL GC N+ KVV+S+
Sbjct: 480 GVTDAGLLPLLESSEAGLVKVNLSGCTNITDKVVSSL 590
Score = 40.4 bits (93), Expect = 0.002
Identities = 47/201 (23%), Positives = 81/201 (39%), Gaps = 35/201 (17%)
Frame = +3
Query: 313 LRRLVLSYCPGYTYSGISFLLSKSKRIQHLDLQ----YTDF------------------- 349
LR L +S CPG+ + +S L ++QH++L TD
Sbjct: 372 LRSLSISNCPGFGNASLSVLGKLCPQLQHVELSGLEGVTDAGLLPLLESSEAGLVKVNLS 551
Query: 350 ----LNDHCVAELSLFLG-DLLSLNLGNCRLLTVSTFFALITNCPSLTEINMNRTNIQGT 404
+ D V+ L+ G L +LNL C+ ++ ++ A+ NC L ++++++ I
Sbjct: 552 GCTNITDKVVSSLANLHGWTLENLNLDGCKNISDASLMAIAENCALLCDLDVSKCTITDA 731
Query: 405 TIPNSLMDRLVNPQFKSLFLASAACLEDQNIIMFAALFPNLQQL---HLSCSYNITEEGI 461
I +N Q L L+ + D+++ L L L H + N T + +
Sbjct: 732 GIAVLAHAEQINLQI--LSLSGCTLVSDRSLTALRKLGHTLLGLNIQHCNAINNSTVDTL 905
Query: 462 RPLLESCRKI----RHLNLTC 478
L C + R NLTC
Sbjct: 906 VEFLWRCDILS*AERRTNLTC 968
>TC215544
Length = 1377
Score = 55.8 bits (133), Expect = 5e-08
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Frame = +3
Query: 430 LEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFD 489
LED + A +LQ L LS S+ +T+ + + C+ + LN++ S S
Sbjct: 459 LEDNAVETIANFCHDLQILDLSKSFKLTDRSLYAIALGCQDLTKLNISGCSAFSDNALAY 638
Query: 490 LPD----LEVLNLTNT--EVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQ 543
L L+VLNL D AL I + C L L L C+ ++D GVM + C
Sbjct: 639 LASFCRKLKVLNLCGCVKAASDTALQAIGHYCNQLQFLNLGWCENVSDVGVMSLAYGCRD 818
Query: 544 LREINLDGCPNVQAKVVASMVVSRPSLRKI 573
LR ++L GC + V ++ P LR +
Sbjct: 819 LRTLDLCGCVLITDDSVIALANRCPHLRSL 908
Score = 51.6 bits (122), Expect = 1e-06
Identities = 73/304 (24%), Positives = 135/304 (44%), Gaps = 27/304 (8%)
Frame = +3
Query: 295 GFRISDQFLSS-IAMESLPLRRLVLSY-------CPGYTYSGISF---LLSKSKRIQ-HL 342
G RISD + S + ESL L LS+ C G + G++ ++++ K I L
Sbjct: 75 GLRISDFGVESMVGKESLRTEVLNLSFEKLMMVECGGNSGKGVNIKAGVITEWKDIPVEL 254
Query: 343 DLQYTDFLNDHCV---AELSLFLGDLLSLNLGNCRLLTVSTFF--ALITNCPSLTEINMN 397
+Q ++D V +E+ + + L L L S +++ P T++
Sbjct: 255 LMQILSLVDDQTVIIASEVCRGWREAICLGLTRLSLSWCSKNMNNLVLSLSPKFTKLQTL 434
Query: 398 RTNIQGTTIPNSLMDRLVN--PQFKSLFLASAACLEDQNIIMFAALFPNLQQLHLSCSYN 455
+ ++ ++ + N + L L+ + L D+++ A +L +L++S
Sbjct: 435 ILRQDKPQLEDNAVETIANFCHDLQILDLSKSFKLTDRSLYAIALGCQDLTKLNISGCSA 614
Query: 456 ITEEGIRPLLESCRKIRHLNLT-CL------SLKSLGTNFDLPDLEVLNLTNTE-VDDEA 507
++ + L CRK++ LNL C+ +L+++G + L+ LNL E V D
Sbjct: 615 FSDNALAYLASFCRKLKVLNLCGCVKAASDTALQAIGHYCN--QLQFLNLGWCENVSDVG 788
Query: 508 LYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASMVVSR 567
+ ++ C L L L C ITD V+ + N C LR + L C N+ + + S+ S+
Sbjct: 789 VMSLAYGCRDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYFCQNITDRAMYSLAQSK 968
Query: 568 PSLR 571
+ R
Sbjct: 969 VNNR 980
>TC209901 weakly similar to UP|Q6RZU4 (Q6RZU4) F-box-like protein, partial
(14%)
Length = 1246
Score = 53.9 bits (128), Expect = 2e-07
Identities = 63/268 (23%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Frame = +1
Query: 295 GFRISDQFLSSIAMESLPLRRLVLSYCPGYTYSGISFLLSKSKRIQHLDLQYTDFLNDHC 354
GF I L + L+ L LS C + SG++ LLS +Q L+L + D+
Sbjct: 100 GFDIHTFHLHRLLRRFQHLKSLSLSNCSELSDSGLTRLLSYGSNLQKLNLDCCLKVTDYG 279
Query: 355 VAELSLFLGDLLSLNLGNCRLLTVSTFFALITNCPSLTEINMNRTNIQGTTIPNSLMDRL 414
++ ++ L+S++L C +T L + C S+ +N++ + N L +
Sbjct: 280 LSLVASGCPSLMSISLYRCPGITDKGLDTLASACLSMKYVNLSYCS---QISDNGL--KA 444
Query: 415 VNPQFKSLFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIRHL 474
+ + L + + E + + F L + SY + +E + ++ S I +L
Sbjct: 445 ITHWCRQLQAINISHCEGLSGVGFERYSKTLAYIEAK-SYKLKQERVMGIV-SGGGIEYL 618
Query: 475 NLTCLSLKSLGTNFDLPD------LEVLNLTNTE-VDDEALYIISNRCPALLQLVLLRCD 527
+++CLS LG LP L++LN V D ++ I+ CP L + L C
Sbjct: 619 DVSCLSWSVLGD--PLPGIGFASCLKILNFRLCRTVSDTSIVAIAKGCPLLEEWNLALCH 792
Query: 528 YITDKGVMHVVNNCTQLREINLDGCPNV 555
+ + G V C L+ ++++ C N+
Sbjct: 793 EVREPGWRTVGLYCRNLKRLHVNRCRNL 876
Score = 49.3 bits (116), Expect = 5e-06
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Frame = +1
Query: 390 SLTEINMNRTNIQGTTIPNSLMDRLVN--PQFKSLFLASAACLEDQNIIMFAALFPNLQQ 447
S T + ++ +G I + RL+ KSL L++ + L D + + NLQ+
Sbjct: 61 SSTALRPLSSSTKGFDIHTFHLHRLLRRFQHLKSLSLSNCSELSDSGLTRLLSYGSNLQK 240
Query: 448 LHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTNTEVDDEA 507
L+L C +T+ G+ + C + ++L + P + D+
Sbjct: 241 LNLDCCLKVTDYGLSLVASGCPSLMSISL-----------YRCPG----------ITDKG 357
Query: 508 LYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGC 552
L +++ C ++ + L C I+D G+ + + C QL+ IN+ C
Sbjct: 358 LDTLASACLSMKYVNLSYCSQISDNGLKAITHWCRQLQAINISHC 492
Score = 48.5 bits (114), Expect = 8e-06
Identities = 73/324 (22%), Positives = 141/324 (42%), Gaps = 33/324 (10%)
Frame = +1
Query: 206 LRKVNLSYHGYLNGTLLSHLFKNCKFLQEVILLRCEQLTIAGVDLALLQKPTLTSLSI-T 264
L+ ++LS L+ + L+ L LQ++ L C ++T G+ L P+L S+S+
Sbjct: 154 LKSLSLSNCSELSDSGLTRLLSYGSNLQKLNLDCCLKVTDYGLSLVASGCPSLMSISLYR 333
Query: 265 CTVTT--GLEHLTSHFIDSLLSLKGLTSLLLTGFRISDQFLSSIAMESLPLRRLVLSYCP 322
C T GL+ L S + LS+K + + +ISD L +I L+ + +S+C
Sbjct: 334 CPGITDKGLDTLAS----ACLSMKYVNLSYCS--QISDNGLKAITHWCRQLQAINISHCE 495
Query: 323 GYTYSG-------ISFLLSKSKRIQHLDLQYT------DFLNDHCVAELSL--------F 361
G + G ++++ +KS +++ + ++L+ C++ L F
Sbjct: 496 GLSGVGFERYSKTLAYIEAKSYKLKQERVMGIVSGGGIEYLDVSCLSWSVLGDPLPGIGF 675
Query: 362 LGDLLSLNLGNCRLLTVSTFFALITNCPSLTEINMNRTNIQGTTIPNSLMDRLVNPQFKS 421
L LN CR ++ ++ A+ CP L E N+ +L + P +++
Sbjct: 676 ASCLKILNFRLCRTVSDTSIVAIAKGCPLLEEWNL------------ALCHEVREPGWRT 819
Query: 422 LFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLT-CLS 480
+ L NL++LH++ N+ + G++ L E C+ + L L C+
Sbjct: 820 VGLYCR----------------NLKRLHVNRCRNLCDNGLQALREGCKNLSILYLNGCVR 951
Query: 481 LKSLG--------TNFDLPDLEVL 496
L S+ N + D+E++
Sbjct: 952 LTSVALELFKCQRANVCIKDIEIM 1023
Score = 39.3 bits (90), Expect = 0.005
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
Frame = +1
Query: 444 NLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTN-TE 502
N Q L CS +RPL S + ++ L L F L+ L+L+N +E
Sbjct: 34 NRQSLQFECS----STALRPLSSSTKGF---DIHTFHLHRLLRRFQ--HLKSLSLSNCSE 186
Query: 503 VDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVAS 562
+ D L + + L +L L C +TD G+ V + C L I+L CP + K + +
Sbjct: 187 LSDSGLTRLLSYGSNLQKLNLDCCLKVTDYGLSLVASGCPSLMSISLYRCPGITDKGLDT 366
Query: 563 MVVSRPSLRKIHVPPNFPLSDRNRKLFSRHGC 594
+ + S++ +++ +SD K + H C
Sbjct: 367 LASACLSMKYVNLSYCSQISDNGLKAIT-HWC 459
Score = 39.3 bits (90), Expect = 0.005
Identities = 34/129 (26%), Positives = 56/129 (43%)
Frame = +1
Query: 121 LTSLNLSNQLILPANGLRAFSQNITTLTSLICSNLISLNSTDIHLIADTFPLLEELDLAY 180
L SL+LSN L +GL + L L + + + L+A P L + L
Sbjct: 154 LKSLSLSNCSELSDSGLTRLLSYGSNLQKLNLDCCLKVTDYGLSLVASGCPSLMSISLYR 333
Query: 181 PSKIINHTHATFSTGLEALSLALIKLRKVNLSYHGYLNGTLLSHLFKNCKFLQEVILLRC 240
I + GL+ L+ A + ++ VNLSY ++ L + C+ LQ + + C
Sbjct: 334 CPGITDK-------GLDTLASACLSMKYVNLSYCSQISDNGLKAITHWCRQLQAINISHC 492
Query: 241 EQLTIAGVD 249
E L+ G +
Sbjct: 493 EGLSGVGFE 519
>BU763861
Length = 463
Score = 53.5 bits (127), Expect = 3e-07
Identities = 46/155 (29%), Positives = 76/155 (48%), Gaps = 12/155 (7%)
Frame = +3
Query: 448 LHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKS-----------LGTNFDLPDLEVL 496
L L+C I++ I + +SC +L CL L+S LG N L L+ L
Sbjct: 18 LDLTCCRFISDAAISTIADSCP-----DLVCLKLESCDMVTENCLYQLGLNCSL--LKEL 176
Query: 497 NLTNTE-VDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNV 555
+LT+ VDD AL +S RC L++L L C I+D G+ H+ NC ++ E++L C +
Sbjct: 177 DLTDCSGVDDIALRYLS-RCSELVRLKLGLCTNISDIGLAHIACNCPKMTELDLYRCVRI 353
Query: 556 QAKVVASMVVSRPSLRKIHVPPNFPLSDRNRKLFS 590
+A++ L +++ ++DR + S
Sbjct: 354 GDDGLAALTSGCKGLTNLNLSYCNRITDRGLEYIS 458
>TC211100 similar to GB|AAM91352.1|22137014|AY133522 At5g23340/MKD15_20
{Arabidopsis thaliana;} , partial (61%)
Length = 815
Score = 51.6 bits (122), Expect = 1e-06
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Frame = +1
Query: 432 DQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLT-CLSLKSLGTNFDL 490
D ++ + A F L+ L+L IT+ G++ + E ++ L+++ C L G +
Sbjct: 319 DSDLAVIATAFTCLKILNLHNCKGITDAGMKAIGEHLSLLQSLDVSYCRKLTDKGLSAVA 498
Query: 491 P---DLEVLNLTNTE-VDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLRE 546
DL +L++ V D L +S C L +L L C ITD G++++ + C ++R
Sbjct: 499 KGCCDLRILHMAGCRFVTDGVLEALSKNCGNLEELGLHGCTSITDNGLINLASGCRRIRF 678
Query: 547 INLDGCPNVQAKVVASM 563
++++ C NV V+S+
Sbjct: 679 LDINKCSNVTDVGVSSV 729
Score = 45.4 bits (106), Expect = 7e-05
Identities = 29/100 (29%), Positives = 49/100 (49%)
Frame = +1
Query: 298 ISDQFLSSIAMESLPLRRLVLSYCPGYTYSGISFLLSKSKRIQHLDLQYTDFLNDHCVAE 357
++D L+ IA L+ L L C G T +G+ + +Q LD+ Y L D ++
Sbjct: 313 VTDSDLAVIATAFTCLKILNLHNCKGITDAGMKAIGEHLSLLQSLDVSYCRKLTDKGLSA 492
Query: 358 LSLFLGDLLSLNLGNCRLLTVSTFFALITNCPSLTEINMN 397
++ DL L++ CR +T AL NC +L E+ ++
Sbjct: 493 VAKGCCDLRILHMAGCRFVTDGVLEALSKNCGNLEELGLH 612
>TC215543 similar to UP|Q8LDN3 (Q8LDN3) F-box protein AtFBL5, partial (46%)
Length = 549
Score = 49.3 bits (116), Expect = 5e-06
Identities = 39/132 (29%), Positives = 66/132 (49%), Gaps = 8/132 (6%)
Frame = +3
Query: 444 NLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLT-CL------SLKSLGTNFDLPDLEVL 496
+L +L++S ++ + L CRK++ LNL C+ +L+++G + L+ L
Sbjct: 12 DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVKAASDTALQAIGHYCN--QLQFL 185
Query: 497 NLTNTE-VDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNV 555
NL E V D + ++ CP L L L C ITD V+ + N C LR + L C ++
Sbjct: 186 NLGWCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIVLANRCPHLRSLGLYYCQSI 365
Query: 556 QAKVVASMVVSR 567
K + S+ S+
Sbjct: 366 TDKAMYSLAQSK 401
Score = 38.9 bits (89), Expect = 0.007
Identities = 44/207 (21%), Positives = 87/207 (41%), Gaps = 2/207 (0%)
Frame = +3
Query: 313 LRRLVLSYCPGYTYSGISFLLSKSKRIQHLDL-QYTDFLNDHCVAELSLFLGDLLSLNLG 371
L +L +S C ++ + +++L S ++++ L+L +D + + + L LNLG
Sbjct: 15 LTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVKAASDTALQAIGHYCNQLQFLNLG 194
Query: 372 NCRLLTVSTFFALITNCPSLTEINMNRTNIQGTTIPNSLMDRLVNPQFKSLFLASAACLE 431
C ++ +L CP L ++L L +
Sbjct: 195 WCENVSDVGVMSLAYGCPDL----------------------------RTLDLCGCVLIT 290
Query: 432 DQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLP 491
D ++I+ A P+L+ L L +IT++ + L +S + N S+K G + D
Sbjct: 291 DDSVIVLANRCPHLRSLGLYYCQSITDKAMYSLAQS----KLNNRMWGSVKGGGNDDD-- 452
Query: 492 DLEVLNLTN-TEVDDEALYIISNRCPA 517
L LN++ T + A+ + + CP+
Sbjct: 453 GLRTLNISQCTALTPSAVQAVCDSCPS 533
>TC214510
Length = 994
Score = 48.5 bits (114), Expect = 8e-06
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +1
Query: 445 LQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTNTEVD 504
LQ L+ NI + I PL E+C + LNL SL N + D+ LNL +
Sbjct: 373 LQNLYCVGCPNIRKVVI-PLRENCFHLLFLNL------SLSANLKVVDVTCLNLCFLNLS 531
Query: 505 D-EALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASM 563
+ +L I+ CP L L L C+ I D+ V ++ CT L +++ CP + + + +
Sbjct: 532 NCSSLEILKLECPKLTSLFLQSCN-IDDEAVEAAISKCTMLETLDVRFCPKISSISMGRL 708
Query: 564 VVSRPSLRKI 573
SL++I
Sbjct: 709 RTICSSLKRI 738
>TC219443
Length = 939
Score = 48.1 bits (113), Expect = 1e-05
Identities = 23/74 (31%), Positives = 44/74 (59%)
Frame = +3
Query: 502 EVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVA 561
++DD+ L I++N CP L L L C +ITD G+ ++ ++ ++L + L+ P + +
Sbjct: 588 QLDDKGLLILANHCPLLCDLSLSYCTFITDVGLRYLASS-SKLSSLRLNFTPRITGCGIL 764
Query: 562 SMVVSRPSLRKIHV 575
S+VV +L +H+
Sbjct: 765 SLVVGCKNLSSLHL 806
Score = 30.0 bits (66), Expect = 3.0
Identities = 33/108 (30%), Positives = 54/108 (49%), Gaps = 2/108 (1%)
Frame = +3
Query: 158 LNSTDIHLIADTFPLLEELDLAYPSKIINHTHATFSTGLEALSLALIKLRKVNLSYHGYL 217
L+ + ++A+ PLL +L L+Y + I + GL L+ + KL + L++ +
Sbjct: 591 LDDKGLLILANHCPLLCDLSLSYCTFITD-------VGLRYLASSS-KLSSLRLNFTPRI 746
Query: 218 NGTLLSHLFKNCKFLQEVILLRCEQLTIAGVD-LALLQK-PTLTSLSI 263
G + L CK L + L+RC L ++ V+ L L K TL LSI
Sbjct: 747 TGCGILSLVVGCKNLSSLHLIRC--LNVSSVEWLEYLGKLGTLEDLSI 884
>TC219384
Length = 1313
Score = 45.8 bits (107), Expect = 5e-05
Identities = 43/229 (18%), Positives = 86/229 (36%)
Frame = +2
Query: 355 VAELSLFLGDLLSLNLGNCRLLTVSTFFALITNCPSLTEINMNRTNIQGTTIPNSLMDRL 414
+A +S L SL + +C L+ F + C + E+++ I
Sbjct: 11 IASISNSCAGLTSLKMESCTLVPSEAFVLIGEKCHYIEELDLTDNEI------------- 151
Query: 415 VNPQFKSLFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRKIRHL 474
D +M + L L + NIT+ G+ + C K++ L
Sbjct: 152 -----------------DDEGLMSISSCSRLSSLKIGICLNITDRGLTYVGMHCSKLKEL 280
Query: 475 NLTCLSLKSLGTNFDLPDLEVLNLTNTEVDDEALYIISNRCPALLQLVLLRCDYITDKGV 534
+L +T VDD + I+ CP L + C ITD+ +
Sbjct: 281 DL---------------------YRSTGVDDLGISAIARGCPGLEMINTSYCTSITDRAL 397
Query: 535 MHVVNNCTQLREINLDGCPNVQAKVVASMVVSRPSLRKIHVPPNFPLSD 583
+ ++ C+ L+ + + GC V + +A++ ++ L ++ + + + D
Sbjct: 398 I-TLSKCSNLKTLEIRGCLLVTSIGLAAIAMNCRQLSRLDIKKCYNIDD 541
Score = 41.2 bits (95), Expect = 0.001
Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 2/263 (0%)
Frame = +2
Query: 137 LRAFSQNITTLTSLICSNLISLNSTDIHLIADTFPLLEELDLAYPSKIINHTHATFSTGL 196
+ + S + LTSL + + S LI + +EELDL + GL
Sbjct: 11 IASISNSCAGLTSLKMESCTLVPSEAFVLIGEKCHYIEELDLT--------DNEIDDEGL 166
Query: 197 EALSLALIKLRKVNLSYHGYLNGTLLSHLFKNCKFLQEVILLRCEQLTIAGVDLALLQKP 256
++S + +L + + + L+++ +C L+E+ L R + G+ P
Sbjct: 167 MSIS-SCSRLSSLKIGICLNITDRGLTYVGMHCSKLKELDLYRSTGVDDLGISAIARGCP 343
Query: 257 TLTSLSIT-CTVTTGLEHLTSHFIDSLLSLKGLTSLLLTGFRISDQFLSSIAMESLPLRR 315
L ++ + CT T +T +L +L+ LL+T L++IAM L R
Sbjct: 344 GLEMINTSYCTSITDRALITLSKCSNLKTLEIRGCLLVTSIG-----LAAIAMNCRQLSR 508
Query: 316 LVLSYCPGYTYSGISFLLSKSKRIQHLDLQYTDFLNDHCVAELSLF-LGDLLSLNLGNCR 374
L + C SG+ L S+ ++ ++L Y+ + V LSL + L S L + +
Sbjct: 509 LDIKKCYNIDDSGMIALAHFSQNLRQINLSYSSVTD---VGLLSLANISCLQSFTLLHLQ 679
Query: 375 LLTVSTFFALITNCPSLTEINMN 397
L A + C LT++ ++
Sbjct: 680 GLVPGGLAAALLACGGLTKVKLH 748
Score = 33.1 bits (74), Expect = 0.36
Identities = 34/131 (25%), Positives = 57/131 (42%), Gaps = 1/131 (0%)
Frame = +2
Query: 152 CSNLISLNSTDIHLIADTFPLLEELDLAYPSKI-INHTHATFSTGLEALSLALIKLRKVN 210
CSNL +L L+ ++ S++ I + +G+ AL+ LR++N
Sbjct: 413 CSNLKTLEIRGCLLVTSIGLAAIAMNCRQLSRLDIKKCYNIDDSGMIALAHFSQNLRQIN 592
Query: 211 LSYHGYLNGTLLSHLFKNCKFLQEVILLRCEQLTIAGVDLALLQKPTLTSLSITCTVTTG 270
LSY + LLS N LQ LL + L G+ ALL LT + + ++ +
Sbjct: 593 LSYSSVTDVGLLS--LANISCLQSFTLLHLQGLVPGGLAAALLACGGLTKVKLHLSLRSL 766
Query: 271 LEHLTSHFIDS 281
L L +++
Sbjct: 767 LPELLIRHVEA 799
>TC225842 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor response-like
protein (At3g26830), partial (54%)
Length = 1777
Score = 44.7 bits (104), Expect = 1e-04
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 35/254 (13%)
Frame = +1
Query: 250 LALLQKPTLTSLSITCTVTTGLEHLTSHFIDSLLSLK-GLTSLLLTGFRISDQFLSSIAM 308
L L KP S+ G H ++++L + GL L L +SD+ L ++
Sbjct: 871 LTLKGKPHFADFSLVPYDWGGFVH---PWVEALAKSRVGLEELRLKRMVVSDESLELLSR 1041
Query: 309 ESLPLRRLVLSYCPGYTYSGISFLLSKSKRIQHLDLQYTDFLNDHCVAELSLF---LGDL 365
+ LVL C G++ G++ L + + ++ LDLQ + + DH LS F L
Sbjct: 1042 SFTHFKSLVLVSCEGFSTDGLAALAANCRFLRELDLQENE-VEDHKGQWLSCFPDNCTSL 1218
Query: 366 LSLNLGNCR-LLTVSTFFALITNCPSLTEINMNRTNIQGTTIPNSLMDRLV--NPQFKSL 422
+SLN + +++ + P+L + +NR ++P + R++ PQ L
Sbjct: 1219 VSLNFACLKGEVSLGALERFVARSPNLKSLKLNR------SVPVDALQRIMMRAPQLSDL 1380
Query: 423 FLA-------SAACLEDQNIIM------------------FAALF---PNLQQLHLSCSY 454
+ S A ++ +N I+ AA++ PNL L+LS +
Sbjct: 1381 GIGSLVHDPESEAYIKLKNTILKCKSITSLSGFLEVAPHCLAAIYPICPNLTSLNLSYAA 1560
Query: 455 NITEEGIRPLLESC 468
I + L+ C
Sbjct: 1561 GIQGSALVKLIHHC 1602
Score = 36.6 bits (83), Expect = 0.033
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 493 LEVLNLTNTEVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINL 549
LE L L V DE+L ++S LVL+ C+ + G+ + NC LRE++L
Sbjct: 979 LEELRLKRMVVSDESLELLSRSFTHFKSLVLVSCEGFSTDGLAALAANCRFLRELDL 1149
>TC218546 similar to GB|AAM91352.1|22137014|AY133522 At5g23340/MKD15_20
{Arabidopsis thaliana;} , partial (20%)
Length = 696
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/131 (25%), Positives = 65/131 (48%), Gaps = 8/131 (6%)
Frame = +2
Query: 433 QNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESC-RKIRHLNLT-CLSLKSLGTNFDL 490
+ I+ A NL+ L + +++ + IR L +C +++L + CL++ + L
Sbjct: 2 ETILSLAEFCGNLETLIIGGCRDVSADAIRSLAAACGSSLKNLRMDWCLNISDSSLSCVL 181
Query: 491 P---DLEVLNL-TNTEVDDEALYIISNRCPALLQLVLL--RCDYITDKGVMHVVNNCTQL 544
+LE L++ E+ D A ++SN P L +L C IT G+ +V CT L
Sbjct: 182 SQCRNLEALDIGCCEELTDAAFQLLSNEEPGLSLKILKISNCPKITVAGIGIIVGKCTSL 361
Query: 545 REINLDGCPNV 555
+ +++ CP++
Sbjct: 362 QYLDVRSCPHI 394
>TC214486
Length = 1070
Score = 44.3 bits (103), Expect = 2e-04
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 445 LQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTNTEVD 504
LQ L+ NI + I P C ++ LNL SL N D+ LNL+ +
Sbjct: 472 LQNLNCVGCPNIRKVFI-PSTAHCSRLLFLNL------SLSANLKEVDVACLNLSWLNLS 630
Query: 505 D-EALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASM 563
+ +L ++ CP L L L C+ I ++ V ++ CT L +++ CP + + + +
Sbjct: 631 NCSSLEVLKLECPRLTSLFLQSCN-INEEAVEAAISKCTMLETLDVRFCPKISSMSMGRL 807
Query: 564 VVSRPSLRKI 573
+ SL++I
Sbjct: 808 RAACSSLKRI 837
>AI855596 similar to GP|30013671|gb Avr9/Cf-9 rapidly elicited protein 189
{Nicotiana tabacum}, partial (21%)
Length = 415
Score = 44.3 bits (103), Expect = 2e-04
Identities = 19/53 (35%), Positives = 30/53 (55%)
Frame = +3
Query: 500 NTEVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGC 552
+ + D+AL +IS RCP L +L L C +TD G+ NC L++++ C
Sbjct: 93 SVSISDDALVLISQRCPNLTRLKLRACRALTDAGMEAFAKNCKGLKKLSCGSC 251
>TC225844 similar to UP|Q9LW29 (Q9LW29) Transport inhibitor response-like
protein (At3g26830), partial (61%)
Length = 1347
Score = 43.9 bits (102), Expect = 2e-04
Identities = 48/216 (22%), Positives = 89/216 (40%), Gaps = 15/216 (6%)
Frame = +3
Query: 353 HCVAELSLFLGDLLSLNLGNCRLLTVSTFFALITNCPSLTEIN-MNRTNIQGT-TIPNSL 410
HC+A + +L SLNL + S LI +C L + M+ +G + S
Sbjct: 234 HCLAAIYPICPNLTSLNLSYAAGIQGSDLIKLIRHCVKLQRLLIMDCIGDKGLDVVATSC 413
Query: 411 MDRLVNPQFKSLFLASAACLEDQNIIMFAALFPNLQQLHLSCSYNITEEGIRPLLESCRK 470
D F S+ + A + ++ ++ + P L L C + +T + + ++C
Sbjct: 414 KDLQELRVFPSVPFGNPAAVTEKGLVAISMGCPKLHSLLYFC-HQMTNAALITVAKNCPN 590
Query: 471 IRHLNLTCL--------SLKSLGTNF-----DLPDLEVLNLTNTEVDDEALYIISNRCPA 517
L L +++ L F L L+L+ D LYI
Sbjct: 591 FIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGQLTDQVFLYI--GMYAE 764
Query: 518 LLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCP 553
L+++ + +DKG+++V+N C +LR++ + CP
Sbjct: 765 KLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIRDCP 872
>TC214559
Length = 762
Score = 42.7 bits (99), Expect = 5e-04
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 445 LQQLHLSCSYNITEEGIRPLLESCRKIRHLNLTCLSLKSLGTNFDLPDLEVLNLTNTEVD 504
LQ L+ NI + I P C ++ LNL SL N D+ LNL+ +
Sbjct: 106 LQNLNCVGCPNIRKVFI-PSTAHCSRLLFLNL------SLSANLKEVDVACLNLSWLNLS 264
Query: 505 D-EALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGCPNVQAKVVASM 563
+ +L ++ CP L L L C+ I ++ V ++ CT L +++ CP + + + +
Sbjct: 265 NCSSLEVLKLECPRLTSLFLQSCN-IDEEAVEAAISKCTMLETLDVRFCPKICSMSMGRL 441
Query: 564 VVSRPSLRKI 573
+ SL++I
Sbjct: 442 RAACSSLKRI 471
>BQ133915 similar to GP|30013671|gb Avr9/Cf-9 rapidly elicited protein 189
{Nicotiana tabacum}, partial (26%)
Length = 429
Score = 42.7 bits (99), Expect = 5e-04
Identities = 19/53 (35%), Positives = 30/53 (55%)
Frame = +1
Query: 500 NTEVDDEALYIISNRCPALLQLVLLRCDYITDKGVMHVVNNCTQLREINLDGC 552
+ + D+AL +IS RCP L +L L C +TD G+ NC L++++ C
Sbjct: 112 SVSIRDDALVLISQRCPNLTRLKLRACLELTDAGMEAFAKNCKGLKKLSCGSC 270
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.323 0.138 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,249,659
Number of Sequences: 63676
Number of extensions: 454625
Number of successful extensions: 2592
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 2424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2538
length of query: 598
length of database: 12,639,632
effective HSP length: 103
effective length of query: 495
effective length of database: 6,081,004
effective search space: 3010096980
effective search space used: 3010096980
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Medicago: description of AC140915.5