BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140549.6 - phase: 0 /pseudo
(305 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226280 similar to UP|EF1G_PRUAV (Q9FUM1) Elongation factor 1-g... 427 e-127
TC226434 homologue to UP|Q8S3W1 (Q8S3W1) Elongation factor 1-gam... 411 e-115
TC226281 similar to UP|Q8S3W1 (Q8S3W1) Elongation factor 1-gamma... 266 e-112
TC226435 homologue to UP|Q8S3W1 (Q8S3W1) Elongation factor 1-gam... 196 1e-50
AW704117 similar to GP|18958499|gb elongation factor 1-gamma {Gl... 83 2e-23
TC219226 weakly similar to UP|O24261 (O24261) Glutathione S-tran... 67 1e-11
TC225403 UP|Q9FQD6 (Q9FQD6) Glutathione S-transferase GST 22 (F... 63 2e-10
BE609749 similar to GP|18958499|gb| elongation factor 1-gamma {G... 62 4e-10
TC216002 UP|Q9FQD4 (Q9FQD4) Glutathione S-transferase GST 24 , ... 60 9e-10
TC209491 UP|Q9FQD7 (Q9FQD7) Glutathione S-transferase GST 21 (F... 58 6e-09
TC206422 UP|Q9FQD3 (Q9FQD3) Glutathione S-transferase GST 25 , ... 48 5e-06
TC207437 similar to UP|O81922 (O81922) Proline-rich protein, par... 46 2e-05
TC225692 UP|Q9FQE8 (Q9FQE8) Glutathione S-transferase GST 10 , ... 43 2e-04
TC204805 homologue to UP|O04874 (O04874) Glutathione transferase... 42 5e-04
CA802014 42 5e-04
TC203467 similar to UP|O82462 (O82462) Glutamyl-tRNA synthetase ... 42 5e-04
TC216150 weakly similar to UP|MNN4_YEAST (P36044) MNN4 protein, ... 41 8e-04
TC225693 UP|O49235 (O49235) 2,4-D inducible glutathione S-transf... 40 0.001
TC216149 weakly similar to UP|MNN4_YEAST (P36044) MNN4 protein, ... 40 0.001
BF008658 GP|11385459|gb glutathione S-transferase GST 22 {Glycin... 40 0.001
>TC226280 similar to UP|EF1G_PRUAV (Q9FUM1) Elongation factor 1-gamma
(EF-1-gamma) (eEF-1B gamma), complete
Length = 1703
Score = 427 bits (1098), Expect(2) = e-127
Identities = 219/258 (84%), Positives = 230/258 (88%), Gaps = 3/258 (1%)
Frame = +3
Query: 1 MGVSNKTPQFINMNPIGKVPVLETPDGPVFESNAIARYVARL-GHNNLFGSSLIHQAQID 59
MGVSNKTP+F+ MNPIGKVPVLETPDGPVFESNAIARYVARL G N LF SS I A ID
Sbjct: 273 MGVSNKTPEFLKMNPIGKVPVLETPDGPVFESNAIARYVARLKGDNALFSSSAIDNAHID 452
Query: 60 QWIDFSSLEIDANIMKLYLPRLGFATYFPPVEENAISSLKRALEALNSHLAHNTYLVGHS 119
QWIDFSSLEIDAN+MKL LPRLGFA Y PPVEE A S+LKRA EALN+HLA NTYLVGHS
Sbjct: 453 QWIDFSSLEIDANLMKLLLPRLGFAPYLPPVEEGANSALKRAFEALNTHLASNTYLVGHS 632
Query: 120 VTLADIITTSNLYIGFAKLLVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTEAMPPI 179
VTLADIITT NLY+GF++LLVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTEA+PPI
Sbjct: 633 VTLADIITTCNLYLGFSQLLVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTEAVPPI 812
Query: 180 PSAKQ--QPKESKPKTKDEPKKVAKSEPEKPKVEVEEEAPKPKPKNPLDLLPPSKMILDD 237
PSAK+ Q KESKPK KDEPKKVAK EP K E EEEAPKPKPKNPLDLLPPSKMILD+
Sbjct: 813 PSAKKPSQSKESKPKPKDEPKKVAKPEP-KEVAEPEEEAPKPKPKNPLDLLPPSKMILDE 989
Query: 238 WKRLYSNTKRNFREVAIK 255
WKRLYSNTK NFREVAIK
Sbjct: 990 WKRLYSNTKTNFREVAIK 1043
Score = 44.7 bits (104), Expect(2) = e-127
Identities = 21/27 (77%), Positives = 22/27 (80%)
Frame = +1
Query: 278 QDSGTCMIQRDTLSGSVITNTMMRTLF 304
+D GTC IQRD L GSVITNTMMRT F
Sbjct: 1042 KDFGTCTIQRDILCGSVITNTMMRTQF 1122
>TC226434 homologue to UP|Q8S3W1 (Q8S3W1) Elongation factor 1-gamma, complete
Length = 1517
Score = 411 bits (1056), Expect = e-115
Identities = 205/258 (79%), Positives = 222/258 (85%), Gaps = 3/258 (1%)
Frame = +3
Query: 1 MGVSNKTPQFINMNPIGKVPVLETPDGPVFESNAIARYVARL-GHNNLFGSSLIHQAQID 59
MGVSNKTP+F+ +NPIGKVPVLETPDGP+FESNAIARYV RL G N L+GSSLI A I+
Sbjct: 171 MGVSNKTPEFLKINPIGKVPVLETPDGPIFESNAIARYVTRLKGDNTLYGSSLIEYAHIE 350
Query: 60 QWIDFSSLEIDANIMKLYLPRLGFATYFPPVEENAISSLKRALEALNSHLAHNTYLVGHS 119
QWIDFSSLEIDANI+K Y PR+G Y PP EE AIS+LKRAL ALN+HLA NTYLVGHS
Sbjct: 351 QWIDFSSLEIDANIIKWYAPRVGRGPYLPPAEEAAISALKRALGALNTHLASNTYLVGHS 530
Query: 120 VTLADIITTSNLYIGFAKLLVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTEAMPPI 179
VTLADII T NLY+GFA +LVKSFTSEFPHVERYFWTLVNQPNFRKI+GQVKQ E +PP+
Sbjct: 531 VTLADIIMTCNLYLGFANILVKSFTSEFPHVERYFWTLVNQPNFRKIIGQVKQAETIPPV 710
Query: 180 PSAKQ--QPKESKPKTKDEPKKVAKSEPEKPKVEVEEEAPKPKPKNPLDLLPPSKMILDD 237
SAK+ QPKESK K KDEPKK A PEKPK E EEEAPKPKPKNPLDLLPPS MILD+
Sbjct: 711 QSAKKPSQPKESKAKAKDEPKKEANKVPEKPKEEAEEEAPKPKPKNPLDLLPPSPMILDE 890
Query: 238 WKRLYSNTKRNFREVAIK 255
WKRLYSNTK NFREVAIK
Sbjct: 891 WKRLYSNTKTNFREVAIK 944
Score = 45.1 bits (105), Expect = 4e-05
Identities = 39/119 (32%), Positives = 52/119 (42%)
Frame = +1
Query: 187 KESKPKTKDEPKKVAKSEPEKPKVEVEEEAPKPKPKNPLDLLPPSKMILDDWKRLYSNTK 246
K +P+ K +K + PK + + P P P+ PL S + W +T+
Sbjct: 739 KNPRPRQKMNQRKRQTRCQKSPKKKQKRRHPSPNPRIPLIF---SLQVR*YWMSGKDSTQ 909
Query: 247 RNFREVAIKDCSKECQNLLTRFNDLIPLFDLQDSGTCMIQRDTLSGSVITNTMMRTLFL 305
+K S LL++ D GTCMI RDTLSG VITNT R LFL
Sbjct: 910 ------TLKPTSGR---LLSK-----------DFGTCMIPRDTLSGFVITNTTTRILFL 1026
>TC226281 similar to UP|Q8S3W1 (Q8S3W1) Elongation factor 1-gamma, partial
(65%)
Length = 902
Score = 266 bits (679), Expect(2) = e-112
Identities = 133/158 (84%), Positives = 142/158 (89%), Gaps = 3/158 (1%)
Frame = +1
Query: 99 KRALEALNSHLAHNTYLVGHSVTLADIITTSNLYIGFAKLLVKSFTSEFPHVERYFWTLV 158
+RA EALN+HLA NTYLVGHSVTLADIITT NLY+GF++LLVKSFTSEFPHVERYFWTLV
Sbjct: 430 RRAFEALNTHLASNTYLVGHSVTLADIITTCNLYLGFSQLLVKSFTSEFPHVERYFWTLV 609
Query: 159 NQPNFRKILGQVKQTEAMPPIPSAKQ---QPKESKPKTKDEPKKVAKSEPEKPKVEVEEE 215
NQPNFRKILGQVKQTE++PPIPSA + QPKESKPK KDEPKK AK EP K + E EEE
Sbjct: 610 NQPNFRKILGQVKQTESVPPIPSAAKKPSQPKESKPKPKDEPKKAAKPEP-KQEAEPEEE 786
Query: 216 APKPKPKNPLDLLPPSKMILDDWKRLYSNTKRNFREVA 253
APKPKPKNPLDLLPPSKMILDDWKRLYS TK NFREVA
Sbjct: 787 APKPKPKNPLDLLPPSKMILDDWKRLYSXTKTNFREVA 900
Score = 157 bits (398), Expect(2) = e-112
Identities = 79/93 (84%), Positives = 82/93 (87%), Gaps = 1/93 (1%)
Frame = +2
Query: 1 MGVSNKTPQFINMNPIGKVPVLETPDGPVFESNAIARYVARL-GHNNLFGSSLIHQAQID 59
MGVSN+TP+F+ MNPIGKVPVLETPDGPVFESNAIARYVARL G N LF SS I A ID
Sbjct: 131 MGVSNRTPEFLKMNPIGKVPVLETPDGPVFESNAIARYVARLKGDNALFSSSAIDNAHID 310
Query: 60 QWIDFSSLEIDANIMKLYLPRLGFATYFPPVEE 92
QWIDFSSLEIDANIMKLYLPRLGFA Y PPVEE
Sbjct: 311 QWIDFSSLEIDANIMKLYLPRLGFAPYLPPVEE 409
>TC226435 homologue to UP|Q8S3W1 (Q8S3W1) Elongation factor 1-gamma, partial
(39%)
Length = 639
Score = 196 bits (498), Expect = 1e-50
Identities = 99/127 (77%), Positives = 109/127 (84%), Gaps = 1/127 (0%)
Frame = +1
Query: 1 MGVSNKTPQFINMNPIGKVPVLETPDGPVFESNAIARYVARL-GHNNLFGSSLIHQAQID 59
MGVSNKTP+F+ +NPIGKVPVLETPDGPVFESNAIARYV +L G N L+GSSLI A I+
Sbjct: 256 MGVSNKTPEFLKINPIGKVPVLETPDGPVFESNAIARYVTQLKGDNTLYGSSLIEHAHIE 435
Query: 60 QWIDFSSLEIDANIMKLYLPRLGFATYFPPVEENAISSLKRALEALNSHLAHNTYLVGHS 119
QWIDFSSLEIDANI+K Y PR+G Y PP EE AIS+LKRAL ALN+HLA NTYLVGHS
Sbjct: 436 QWIDFSSLEIDANIIKWYAPRVGRGPYLPPAEEAAISALKRALAALNTHLASNTYLVGHS 615
Query: 120 VTLADII 126
VTLADII
Sbjct: 616 VTLADII 636
>AW704117 similar to GP|18958499|gb elongation factor 1-gamma {Glycine max},
partial (33%)
Length = 463
Score = 82.8 bits (203), Expect(2) = 2e-23
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2
Query: 197 PKKVAKSEPEKPKVEVEEEAPKPKPKNPLDLLPPSKMILDDWKRLYSNTKRNFREVAIK 255
PKK A + P KPK E E+AP PKP NPLDLLPPS +ILD+ K LYSNTK NF++VAIK
Sbjct: 2 PKKEANNVP*KPKEEA*EDAPNPKPNNPLDLLPPSPIILDNCKTLYSNTKTNFKDVAIK 178
Score = 43.5 bits (101), Expect(2) = 2e-23
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +3
Query: 278 QDSGTCMIQRDTLSGSVITNTMMRTLFL 305
+D GTCMI RDTLSG VITNT R LFL
Sbjct: 177 KDFGTCMIPRDTLSGFVITNTTTRILFL 260
>TC219226 weakly similar to UP|O24261 (O24261) Glutathione S-transferase,
partial (72%)
Length = 570
Score = 66.6 bits (161), Expect = 1e-11
Identities = 41/129 (31%), Positives = 69/129 (52%), Gaps = 8/129 (6%)
Frame = +2
Query: 5 NKTPQFINMNPIGKVPVLETPDGPVFESNAIARYVARLGHN---NLFGSSLIHQAQIDQW 61
+KTP+F+ P G+VP +E D +FES AI RY A + +L G +L +A ++QW
Sbjct: 182 HKTPEFLLRQPFGQVPAVEDGDFRLFESRAIIRYFASKYADRGPDLLGKTLEERALVEQW 361
Query: 62 ID-----FSSLEIDANIMKLYLPRLGFATYFPPVEENAISSLKRALEALNSHLAHNTYLV 116
++ F++L + + LP++G + LK+ L+ S L+ +TYL
Sbjct: 362 LEVEASNFNNLCFNIMFQLVILPKMGKPGDL-ALAHKCEQDLKKVLDVYESRLSQSTYLA 538
Query: 117 GHSVTLADI 125
G + T+AD+
Sbjct: 539 GDNFTMADL 565
>TC225403 UP|Q9FQD6 (Q9FQD6) Glutathione S-transferase GST 22 (Fragment) ,
complete
Length = 1016
Score = 62.8 bits (151), Expect = 2e-10
Identities = 46/180 (25%), Positives = 85/180 (46%), Gaps = 17/180 (9%)
Frame = +2
Query: 5 NKTPQFINMNPIGKVPVLETPDGPVFESNAIARYVARLGHN---NLFGSSLIHQAQIDQW 61
NK P+F+ + P G +PV++ D ++ES AI RY+A + +L G ++ + ++QW
Sbjct: 149 NKEPEFLKLQPFGSLPVIQDGDYTLYESRAIIRYLAEKYKDQGTDLLGKTIEEKGLVEQW 328
Query: 62 IDFSSLEIDANIMKLYLPRLGFATYFPP---------VEENAISSLKRALEALNSHLAHN 112
LE++A+ L L F P V E + +++ L+ L+ +
Sbjct: 329 -----LEVEAHNFHPPLYNLVINVLFAPLTGAPSDQKVIEESDKKIEKVLDVYEERLSKS 493
Query: 113 TYLVGHSVTLADIITTSNLYIGFAKLLVK-----SFTSEFPHVERYFWTLVNQPNFRKIL 167
YL G +LAD+ ++ F LV + + HV ++ + N+P ++K+L
Sbjct: 494 KYLAGDFFSLADL-----SHLPFGHYLVNQTGRGNLVRDRKHVSAWWDDISNRPAWQKVL 658
>BE609749 similar to GP|18958499|gb| elongation factor 1-gamma {Glycine max},
partial (10%)
Length = 142
Score = 61.6 bits (148), Expect = 4e-10
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +2
Query: 94 AISSLKRALEALNSHLAHNTYLVGHSVTLADIITTSNLYIGFAKLL 139
AIS+LKRAL A+N+HLA NTYL GHSVTLA II T N Y+G ++
Sbjct: 5 AISALKRALGAVNTHLASNTYLFGHSVTLAHIIMTCNXYVGSGNIV 142
>TC216002 UP|Q9FQD4 (Q9FQD4) Glutathione S-transferase GST 24 , complete
Length = 1062
Score = 60.5 bits (145), Expect = 9e-10
Identities = 45/170 (26%), Positives = 77/170 (44%), Gaps = 8/170 (4%)
Frame = +1
Query: 6 KTPQFINMNPIGKVPVLETPDGPVFESNAIARYVA---RLGHNNLFGSSLIHQAQIDQWI 62
K P+++ + P G VPV++ D ++ES AI RY A R L G ++ + ++QW+
Sbjct: 193 KDPEYLKLQPFGVVPVIKDGDYTLYESRAIMRYYAEKYRSQGVELLGKTIEERGLVEQWL 372
Query: 63 DFSSLEIDANIMKLYLPRLGFATYF-----PPVEENAISSLKRALEALNSHLAHNTYLVG 117
+ + L L L F + F P V E + + L + L L+ YL G
Sbjct: 373 EVEAHNFHPQAYNLCLHGL-FGSLFGVTPDPKVIEESEAKLVQVLNIYEERLSKTKYLAG 549
Query: 118 HSVTLADIITTSNLYIGFAKLLVKSFTSEFPHVERYFWTLVNQPNFRKIL 167
++ADI L + K E HV ++ + ++P++ K+L
Sbjct: 550 DFFSIADISHLPFLDYVVNNMGKKYLLEERKHVGAWWDDISSRPSWNKVL 699
>TC209491 UP|Q9FQD7 (Q9FQD7) Glutathione S-transferase GST 21 (Fragment) ,
complete
Length = 868
Score = 57.8 bits (138), Expect = 6e-09
Identities = 43/173 (24%), Positives = 78/173 (44%), Gaps = 9/173 (5%)
Frame = +3
Query: 5 NKTPQFINMNPIGKVPVLETPDGPVFESNAIARYVAR---------LGHNNLFGSSLIHQ 55
+K P F++ NP G +PVLE D +FES AI YVA + H + ++L+ +
Sbjct: 84 HKQPPFLSKNPFGFIPVLEDGDLTLFESRAITAYVAEKFKETEPDLIRHKDAKEAALV-K 260
Query: 56 AQIDQWIDFSSLEIDANIMKLYLPRLGFATYFPPVEENAISSLKRALEALNSHLAHNTYL 115
+ + + I + ++ V + + LK L+ + L+ YL
Sbjct: 261 VWTEVESHYYEPAVSPIIYEYFVAPFQGKEPDKSVIDTNVEKLKTVLDVYEAKLSSTKYL 440
Query: 116 VGHSVTLADIITTSNLYIGFAKLLVKSFTSEFPHVERYFWTLVNQPNFRKILG 168
G +LAD+ S + + S +E PHV+ ++ + ++P F K++G
Sbjct: 441 AGDFYSLADLSHVSETHY-LMQTPCASMINELPHVKAWWEDISSRPAFNKVVG 596
>TC206422 UP|Q9FQD3 (Q9FQD3) Glutathione S-transferase GST 25 , complete
Length = 1064
Score = 48.1 bits (113), Expect = 5e-06
Identities = 48/169 (28%), Positives = 78/169 (45%), Gaps = 9/169 (5%)
Frame = +1
Query: 8 PQFINMNPIGKVPVLETPDGPVFESNAIARYVA-RLGHNNLFGSSLIHQAQIDQWIDFSS 66
P+F+ +NP+G VPVL +++S AI Y+ + HN L + +A I+F +
Sbjct: 181 PEFLQLNPVGCVPVLVDDHVVLYDSFAIIMYLEDKYPHNPLLPHDIYKRA-----INFQA 345
Query: 67 LEIDANIMKLYLPRLGFATYF----PPVEEN--AISSLKRALEALNSHLAHNT--YLVGH 118
+ ++ ++ L L Y P E+ A S ++R +AL L +T Y G
Sbjct: 346 ASVVSSTIQ-PLHNLSLLNYIGEKVGPDEKLPWAQSIIRRGFKALEKLLKDHTGRYATGD 522
Query: 119 SVTLADIITTSNLYIGFAKLLVKSFTSEFPHVERYFWTLVNQPNFRKIL 167
V LADI L+ F + + +EFP + R T P F++ L
Sbjct: 523 EVFLADIFLAPQLHAAFKRFNI--HMNEFPILARLHETYNEIPAFQEAL 663
>TC207437 similar to UP|O81922 (O81922) Proline-rich protein, partial (65%)
Length = 1179
Score = 46.2 bits (108), Expect = 2e-05
Identities = 28/66 (42%), Positives = 35/66 (52%), Gaps = 1/66 (1%)
Frame = +3
Query: 168 GQVKQTEAMPPIPSAKQQPKESKPKTKDEPKKVAK-SEPEKPKVEVEEEAPKPKPKNPLD 226
G +K E + P P K P+ KPK ++PK+ K EPEKPK E E+ PKPK P
Sbjct: 270 GTIKSIEIVEP-PKPKPPPQPEKPKEPEKPKEPQKPKEPEKPK-EPEKPKEPPKPKEPEK 443
Query: 227 LLPPSK 232
P K
Sbjct: 444 PKEPEK 461
Score = 43.1 bits (100), Expect = 2e-04
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +3
Query: 177 PPIPSAKQQPKE-SKPKTKDEPKKVAK-SEPEKPK-VEVEEEAPKPKPKNP 224
PP P ++PKE KPK ++PK+ K EPEKPK E +E KPKP+ P
Sbjct: 417 PPKPKEPEKPKEPEKPKEPEKPKEPEKPKEPEKPKEPEKPKEPEKPKPECP 569
Score = 40.0 bits (92), Expect = 0.001
Identities = 26/58 (44%), Positives = 31/58 (52%), Gaps = 2/58 (3%)
Frame = +3
Query: 177 PPIPSAKQQPKE-SKPKTKDEPKKVAK-SEPEKPKVEVEEEAPKPKPKNPLDLLPPSK 232
P P Q+PKE KPK ++PK+ K EPEKPK E E+ KPK P P K
Sbjct: 345 PEKPKEPQKPKEPEKPKEPEKPKEPPKPKEPEKPK-EPEKPKEPEKPKEPEKPKEPEK 515
Score = 38.5 bits (88), Expect = 0.004
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 177 PPIPSAKQQPKES-KPKTKDEPKKVAK-SEPEKPKVEVEEEAPKPKPKNPLDLLPPSK 232
P P ++PKE KPK ++PK+ K EPEKPK E E+ KPK P P K
Sbjct: 381 PEKPKEPEKPKEPPKPKEPEKPKEPEKPKEPEKPK-EPEKPKEPEKPKEPEKPKEPEK 551
Score = 37.7 bits (86), Expect = 0.007
Identities = 24/64 (37%), Positives = 32/64 (49%), Gaps = 5/64 (7%)
Frame = +3
Query: 177 PPIPSAKQQPKE-SKPKTKDEPKKVAK-SEPEKPKVEVEEE---APKPKPKNPLDLLPPS 231
P P ++PKE KPK ++PK+ K EPEKPK E P P P P PP
Sbjct: 453 PEKPKEPEKPKEPEKPKEPEKPKEPEKPKEPEKPKPECPPPVPVCPAPVPVCPPQPTPPP 632
Query: 232 KMIL 235
+++
Sbjct: 633 PVVV 644
Score = 37.7 bits (86), Expect = 0.007
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 177 PPIPSAKQQPKE-SKPKTKDEPKKVAK-SEPEKPKVEVEEEAPKPKPKNPLDLLPPSK 232
P P ++PKE KPK +PK+ K EPEKPK E E+ KPK P P K
Sbjct: 363 PQKPKEPEKPKEPEKPKEPPKPKEPEKPKEPEKPK-EPEKPKEPEKPKEPEKPKEPEK 533
>TC225692 UP|Q9FQE8 (Q9FQE8) Glutathione S-transferase GST 10 , complete
Length = 973
Score = 43.1 bits (100), Expect = 2e-04
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Frame = +3
Query: 5 NKTPQFINMNPI-GKVPVLETPDGPVFESNAIARYVARL--GHNNLFGSSLIHQAQIDQW 61
NK+P + MNP+ K+PVL P+ ES +Y+ + N L S +AQ W
Sbjct: 198 NKSPLLLQMNPVHKKIPVLIHNGKPISESLIAVQYIEEVWNDRNPLLPSDPYQRAQARFW 377
Query: 62 IDFSSLEIDANIMKLYLPRLGFATYFPPVEENAISSLKRALEALNSHLAHNTYLVGHSVT 121
D+ ++I K++ T +E A AL+ L L TY G ++
Sbjct: 378 ADYVDIKIHDLGKKIW-------TSKGEEKEAAKKEFIEALKLLEEQLGDKTYFGGDNIG 536
Query: 122 LADI 125
DI
Sbjct: 537 FVDI 548
>TC204805 homologue to UP|O04874 (O04874) Glutathione transferase , complete
Length = 978
Score = 41.6 bits (96), Expect = 5e-04
Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 5/150 (3%)
Frame = +2
Query: 3 VSNKTPQFINMNPI-GKVPVLETPDGPVFESNAIARYVARL--GHNNLFGSSLIHQAQID 59
+ NK+P + MNP+ K+PVL P+ ES +Y+ + N L S +AQ
Sbjct: 197 LQNKSPLLLKMNPVHKKIPVLIHNGKPICESLVAVQYIEEVWNDRNPLLPSDPYQRAQAR 376
Query: 60 QWIDFSSLEIDANIMKLYLPRLGFATYFPPVEENAISSLKRALEALNSHLAHNTYLVGHS 119
W DF +I K++ T +E A AL+ L L TY G
Sbjct: 377 FWADFVDNKIFDLGRKIW-------TSKGEEKEAAKKEFIEALKLLEEQLGDKTYFGGDD 535
Query: 120 VTLADI--ITTSNLYIGFAKLLVKSFTSEF 147
+ DI I + F L ++S +F
Sbjct: 536 LGFVDIALIPFDTWFKTFGSLNIESECPKF 625
>CA802014
Length = 388
Score = 41.6 bits (96), Expect = 5e-04
Identities = 33/75 (44%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +1
Query: 164 RKILGQVKQTEAM--PPIPSAKQQPKE-SKPKTKDEPKKVAK-SEPEKPKVEVEEEAPK- 218
+KIL + Q E P P Q+PKE KPK ++PK+ K EPEKPK E E PK
Sbjct: 145 KKILCKFPQPEKPKEPEKPKEPQKPKEPEKPKEPEKPKEPPKPKEPEKPK---EPERPKE 315
Query: 219 -PKPKNPLDLLPPSK 232
KPK P P K
Sbjct: 316 PEKPKEPEKPKEPEK 360
Score = 35.4 bits (80), Expect = 0.032
Identities = 32/89 (35%), Positives = 42/89 (46%), Gaps = 4/89 (4%)
Frame = +1
Query: 140 VKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTEAM--PPIPSAKQQPKE-SKPKTKDE 196
VK +FP E+ +P K + K+ E P P +PKE KPK +
Sbjct: 142 VKKILCKFPQPEK-----PKEPEKPKEPQKPKEPEKPKEPEKPKEPPKPKEPEKPKEPER 306
Query: 197 PKKVAK-SEPEKPKVEVEEEAPKPKPKNP 224
PK+ K EPEKPK E E PK +P+ P
Sbjct: 307 PKEPEKPKEPEKPK---EPEKPK-EPEKP 381
>TC203467 similar to UP|O82462 (O82462) Glutamyl-tRNA synthetase , partial
(88%)
Length = 2333
Score = 41.6 bits (96), Expect = 5e-04
Identities = 31/128 (24%), Positives = 59/128 (45%), Gaps = 1/128 (0%)
Frame = +2
Query: 34 AIARYVARLGH-NNLFGSSLIHQAQIDQWIDFSSLEIDANIMKLYLPRLGFATYFPPVEE 92
A+ RY+ R+ N +G + +QID+W+D Y P L P E
Sbjct: 161 ALLRYIGRVASLPNFYGQNPFESSQIDEWLD-------------YAPILSLG----PASE 289
Query: 93 NAISSLKRALEALNSHLAHNTYLVGHSVTLADIITTSNLYIGFAKLLVKSFTSEFPHVER 152
N A + ++ +L T LVG+S+++AD+ + L + + ++P++ R
Sbjct: 290 N-------ACKYIDEYLEKRTLLVGYSLSIADLAIWAGLAGSGKRWESLRKSKKYPNLAR 448
Query: 153 YFWTLVNQ 160
+F ++V +
Sbjct: 449 WFNSIVEE 472
>TC216150 weakly similar to UP|MNN4_YEAST (P36044) MNN4 protein, partial (5%)
Length = 928
Score = 40.8 bits (94), Expect = 8e-04
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +3
Query: 171 KQTEAMPPIPSAKQQPKESKPKTKDEPKKVAKSEPEKPKVEVEEEAPKPKPKNPLDLL 228
K+ E + K++ K+ +PK ++E K+ K E EK + E ++EAP P P L+L+
Sbjct: 435 KKEEPKKEGEAKKEEEKKEEPKKEEEKKEETKKEEEKKEEEKKKEAPPPPPDPVLELV 608
Score = 37.4 bits (85), Expect = 0.009
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 180 PSAKQQPKESKPKTKDEPKKVAKSEPEKPKVEVEEEAPK 218
P K++PK+ +PK ++E K+ K E E K E ++E PK
Sbjct: 384 PEKKEEPKKEEPKKEEEKKEEPKKEGEAKKEEEKKEEPK 500
>TC225693 UP|O49235 (O49235) 2,4-D inducible glutathione S-transferase ,
complete
Length = 1058
Score = 40.4 bits (93), Expect = 0.001
Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 8/151 (5%)
Frame = +2
Query: 5 NKTPQFINMNPI-GKVPVLETPDGPVFESNAIARYVARL--GHNNLFGSSLIHQAQIDQW 61
NK+P + MNP+ K+PVL P+ ES +Y+ + N L S +AQ W
Sbjct: 251 NKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVQYIEEVWNDRNPLLPSDPYQRAQARFW 430
Query: 62 IDFSSLEIDANIMKLYLPRLGFATYFPPVEENAISSLKRALEALNSHLAHNTYLVGHSVT 121
D+ +I K++ T +E A AL+ L L TY G ++
Sbjct: 431 ADYVDKKIYDLGRKIW-------TSKGEEKEAAKKEFIEALKLLEEQLGDKTYFGGDNLG 589
Query: 122 LADI-----ITTSNLYIGFAKLLVKSFTSEF 147
DI T Y F L ++S +F
Sbjct: 590 FVDIALVPFYTWFKAYETFGTLNIESECPKF 682
>TC216149 weakly similar to UP|MNN4_YEAST (P36044) MNN4 protein, partial (4%)
Length = 2040
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +3
Query: 171 KQTEAMPPIPSAKQQPKESKPKTKDEPKKVAKSEPEKPKVEVEEEAPKPKPKNPLDLL 228
K+ E + K++ K+ +PK ++E K+ K E EK + E ++EAP P P L+L+
Sbjct: 1269 KKEEPKKEGEAKKEEEKKEEPKKEEEKKEEPKKEEEKKEEEKKKEAPPPPPDPVLELV 1442
Score = 33.9 bits (76), Expect = 0.094
Identities = 20/45 (44%), Positives = 27/45 (59%), Gaps = 2/45 (4%)
Frame = +3
Query: 180 PSAKQQPKESKPKTKDEPKK--VAKSEPEKPKVEVEEEAPKPKPK 222
P K++PK K + K+EPKK AK E EK + +EE K +PK
Sbjct: 1236 PEKKEEPK--KEEKKEEPKKEGEAKKEEEKKEEPKKEEEKKEEPK 1364
Score = 28.9 bits (63), Expect = 3.0
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 190 KPKTKDEPKKVAK-SEPEKPKVEVEEEAPKPKPK 222
+P+ K+EPKK K EP+K +EE K +PK
Sbjct: 1233 EPEKKEEPKKEEKKEEPKKEGEAKKEEEKKEEPK 1334
Score = 28.5 bits (62), Expect = 4.0
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +3
Query: 167 LGQVKQTEAM--PPIPSAKQQPKESKPKTKDEPKKVA--KSEPEKPKVEVEEEAPKPKPK 222
+G K+ E P K++PK+ K+E KK K E +K + + EEE + + K
Sbjct: 1218 VGPAKEPEKKEEPKKEEKKEEPKKEGEAKKEEEKKEEPKKEEEKKEEPKKEEEKKEEEKK 1397
Query: 223 NPLDLLPPSKMI 234
PP ++
Sbjct: 1398 KEAPPPPPDPVL 1433
>BF008658 GP|11385459|gb glutathione S-transferase GST 22 {Glycine max},
partial (46%)
Length = 425
Score = 40.4 bits (93), Expect = 0.001
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +1
Query: 11 INMNPIGKVPVLETPDGPVFESNAIARYVARLGHN---NLFGSSLIHQAQIDQWID 63
IN+ P G +PV++ D ++ES AI RY+A + +L G ++ + ++QW++
Sbjct: 241 INLQPFGSLPVIQDGDYTLYESRAIIRYLAEKYKDQGTDLLGKTIEEKGLVEQWLE 408
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,233,633
Number of Sequences: 63676
Number of extensions: 196299
Number of successful extensions: 2020
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1884
length of query: 305
length of database: 12,639,632
effective HSP length: 97
effective length of query: 208
effective length of database: 6,463,060
effective search space: 1344316480
effective search space used: 1344316480
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC140549.6